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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056611 ID=TCONS_00056611|Name=TCONS_00056611|organism=Clytia hemisphaerica|type=transcript|length=669bp
AGAACCCAGTTCGAGACCGGGTATATATATGGCGTAGATCATTGCACTAA
ATCATTATGCTATCCAAGATAATCATGATTTTTTTCGGGTTTATCGCCTG
GTCTTGgccaatttcttttttcgagTTCATCGCCAGGTCTTGgccaattt
cttttttcgagTTCATCGCCTGGTCTTGGCCAATTTCTTCTTTCGAGTTC
ATCGCCTGGCCTTGgccaatttcttttttcgagTTCATCACCAGGTCTTg
gccaatttcttttttctagttCATCGCCAGGTCTTGgccaatttcttttt
tcgagTTCATCGCCTGGTCTTGgccaatttcttttttcgagTTCATCGCC
TGGCCTTGgccaatttcttttttcgagTTCATCGCCAGGTCTTGgccaat
ttcttttttcgagTTCATCGCCAGGTCTTGgccaatttcttttttcgaat
TCATCGCCTGGCCTTagccaatttcttttttctagttCATCGCCTGGTct
tggccaattttttttttcgagttcATCGCCAGGTCTTGgccaatttcttt
tttcgagTTCATCGCCAGGTCTTGgccaatttcttttttcgagTTCATCG
CCAGGTCTTGgccaatttcttttttcgagTTCATCGCCAATTCTTTGCCA
ATTTCCGACTTTAAACGCA Run BLAST on NCBI transcript from alignment at scaffold_277:194465..195349- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056611 ID=TCONS_00056611|Name=TCONS_00056611|organism=Clytia hemisphaerica|type=transcript|length=885bp|location=Sequence derived from alignment at scaffold_277:194465..195349- (Clytia hemisphaerica)
AGAACCCAGTTCGAGACCGGGTATATATATGGCGTAGATCATTGCACTAA
ATCATTATGCTATCCAAGATAATCATGATTTTTTTCGGGTTTATCGCCTG
GTCTTGGCCAATTTCCTTTTTCTAGTTCATCACCAGGTCTTGGCCGATTT
CCTTTTTCTAGTTCATCACCAGGTCTTGGCCGATTTCTTTTTTCGAGTTC
ATCGCCAGGTCTTGGCCAATTTCTTTTTTCGAGTTCATCGCCAGGTCTTG
GCCAATTTATTTTTTCGAGTTCATCGCTTGGTCTTGGCCAATTTCTTTTT
TCGAGTTCATCGCCAGGTCTTGGCCAATTTCTTTTTTCGAGTTCATCGCC
AGGTCTTGGCCAATTTCTTTTTTCGAGTTCATCGCCTGGTCTTGGCCAAT
TTCTTCTTTCGAGTTCATCGCCTGGCCTTGGCCAATTTCTTTTTTCGAGT
TCATCACCAGGTCTTGGCCAATTTCTTTTTTCTAGTTCATCGCCAGGTCT
TGGCCAATTTCTTTTTTCGAGTTCATCGCCTGGTCTTGGCCAATTTCTTT
TTTCGAGTTCATCGCCTGGCCTTGGCCAATTTCTTTTTTCGAGTTCATCG
CCAGGTCTTGGCCAATTTCTTTTTTCGAGTTCATCGCCAGGTCTTGGCCA
ATTTCTTTTTTCGAATTCATCGCCTGGCCTTAGCCAATTTCTTTTTTCTA
GTTCATCGCCTGGTCTTGGCCAATTTTTTTTTTCGAGTTCATCGCCAGGT
CTTGGCCAATTTCTTTTTTCGAGTTCATCGCCAGGTCTTGGCCAATTTCT
TTTTTCGAGTTCATCGCCAGGTCTTGGCCAATTTCTTTTTTCGAGTTCAT
CGCCAATTCTTTGCCAATTTCCGACTTTAAACGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056611-exon-scaffold_277-1575043694:195250..195349 | TCONS_00056611-exon-scaffold_277-1575043694:195250..195349 | Clytia hemisphaerica | exon |
| TCONS_00056611-exon-scaffold_277-1575043694:194465..195033 | TCONS_00056611-exon-scaffold_277-1575043694:194465..195033 | Clytia hemisphaerica | exon |
| TCONS_00056611-exon-scaffold_277-1510915933:195250..195349 | TCONS_00056611-exon-scaffold_277-1510915933:195250..195349 | Clytia hemisphaerica | exon |
| TCONS_00056611-exon-scaffold_277-1510915933:194465..195033 | TCONS_00056611-exon-scaffold_277-1510915933:194465..195033 | Clytia hemisphaerica | exon |
| TCONS_00056611-exon-scaffold_277-1491911889:195250..195349 | TCONS_00056611-exon-scaffold_277-1491911889:195250..195349 | Clytia hemisphaerica | exon |
| TCONS_00056611-exon-scaffold_277-1491911889:194465..195033 | TCONS_00056611-exon-scaffold_277-1491911889:194465..195033 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_277 | supercontig | scaffold_277:194465..195349 - |
Blast
The following BLAST results are available for this feature:
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