TCONS_00056778 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056778
Unique NameTCONS_00056778
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2275

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056778 ID=TCONS_00056778|Name=TCONS_00056778|organism=Clytia hemisphaerica|type=transcript|length=2275bp
CCATTTTTTAACAACGAGGTAGATAATAAACCCATGTTATAATTTTCTGc
agcaaataaaaaaaaacaaatacaaaaaaatacaaacgaAAGTAAAGAAA
GATGGAAAACAAATTGGAGAATATACCATATGTATTTGACGAGCAATTGC
AAAAGGTTGAGATCAAACCAAGGAATCAAAAGAAGTACAACAAAGATGTG
ACCATCTACTATGGTAAACAAACAAGAAACCGAACAACTGATGAACTCAT
CGCCGATCCTGCAAAGTTAGCTAATACACGATACGGTAGACGGAGCGgac
tTCTTATGAAGGTTTTCCAATACAACCTAGTGACAGGTGATCATTGTTAT
ATCGAATTCGAACATGCAAAATTGAAAACCGTTTCCAAGTACAGCTCATC
TTTGGAACACATGATCAAAATGAAGAATCTTCATCTTCATGAGACAAGTA
ACTCATCCACGGAACCAGTACAATTTCTTATAGTTGAACAACCATCTGAA
CCATCCATACAATCACCAGATGAAAACAATTCATCAGAATCAGTATCAAT
GACCGAGCATGATGCTACAGCGAATGGCGATACAGGAGAAATGCCAAACT
CGCAAGAAACTGTGGTCGGCACTTCCCAGATTTCCAATAATATGGTTTTA
GATGAGTATGGCTACTATAGACCACAGCCGTTCCTCTATGACGAGACATT
GAGGAAATTTAATataaaaacaaagtcaaaaaatattaagaactcaacga
aagaaaaaacgATTGCTAATGGAAGTAAGACGAGATGTAGGGCGGAAGGG
CGTATCACAGATccaaagaaattgagtaatgcTCGATGCGGAAGAAGCAG
AGGGCTCCTGACATCCATTTATCAATACAGCCTTATGACAGGTGATAGTT
GTTACATTGAATTCGAACACGAAGAAACGAAAGTTGTATCAAAATACAGT
TCATCGATCGAATACATGATAAAGGTTCAAAACAGATTCTCTAACAATAT
AAACACTACCTTTGGAACAATGGTCGAATCTCTGGTCAATTATGATGCAG
GATCGCAAGTGGTTACCAAACAGTCGATACACAGATCAACAGTCAGAAAA
GCCGAGGTACAAGATGTGCAGAGATATGTAGGTGAATCGGAAACTTCAAG
AGCAACCAATTCCATAGAGATTTCACCAACAATTATCGTAGATGAGATTC
AAGACTCATCAACTTCACAATCTCAAGACGAACCATCTCTAGAGGGACTA
GCAAATGTGACCATATTGTTGGAACAAGCTAACCAACGATCAAATGATGA
GCTGCAATCTGAAACGCCCATAGCCACTCAAACGTCGCCAAATGCCGCCC
TTCCGTTCGTCTATGATGACCAAATGAGGAAAATCGAAGTCAAATCCTCA
ATAAATGAAGCAAGATGTAGGGCGGAAGGGCGGATTAAAGATCGGAAGAA
ATTAATCGATGCTCGAAATCAAAAGCGGCAAGaTCTCTTGGCCAAGATTC
ACGAGTACAGTCTTTTAACGGGCGACGATTGCTACGTCCAATTCCAACAC
GCACAACAGAAAACCGTCGCACGATACACATCAACAAAAGAGTACATGTC
GAAATTGAAACATGCAAATTCTTTACCCGCTTTTGATAATGATGGAGGGA
TTAATATAGAAATACCGAATGGTGAAatattagagactttggataTAAAG
ATTACTAAAAGACAACAACAGACAGTCGTTTCCATTggtgaaaaactttc
aaatgatCCGTCCGCAAATGCTAATAATGCTGGCCATGTTGCACCGATGA
ATAAACGGACTATAAAAAATGCTACAAAACCTAAACCTTCTCCGGCTAAA
AAATCGAAAACATCGAAAAAGTAAATATGCGTCGaattttgtgacatttt
gtgGCATTTTGGTATTTGTCGTAAATCTTTTGATGAAGTGAGAGATTTCT
GGTAATAAGAACGAAAAACATGCTTGATCTTATTATCGTAATACTGATGT
ACATTTATAGAACATCCATGGAATCTTTTGATGGGTGTATTTCCTATTTA
TATGTTGGAGAAGGCATTCTCACAGTCTTCAACGACAACACTAGCTAGCT
CTTATATTATTTAGATTTGATTTACACGGGTGACAAGCCTTTGTGCTACA
TTTCtttgtaagttttttttcattttatgtaccagtggataccccttaaa
acccacaataaaaagtggtaccctctatctcattgtttagttggagtgta
aggctgaaactttttgtgttgaaag
Run BLAST on NCBI

protein sequence of TCONS_00056778-protein

>TCONS_00056778-protein ID=TCONS_00056778-protein|Name=TCONS_00056778-protein|organism=Clytia hemisphaerica|type=polypeptide|length=590bp
MENKLENIPYVFDEQLQKVEIKPRNQKKYNKDVTIYYGKQTRNRTTDELI
ADPAKLANTRYGRRSGLLMKVFQYNLVTGDHCYIEFEHAKLKTVSKYSSS
LEHMIKMKNLHLHETSNSSTEPVQFLIVEQPSEPSIQSPDENNSSESVSM
TEHDATANGDTGEMPNSQETVVGTSQISNNMVLDEYGYYRPQPFLYDETL
RKFNIKTKSKNIKNSTKEKTIANGSKTRCRAEGRITDPKKLSNARCGRSR
GLLTSIYQYSLMTGDSCYIEFEHEETKVVSKYSSSIEYMIKVQNRFSNNI
NTTFGTMVESLVNYDAGSQVVTKQSIHRSTVRKAEVQDVQRYVGESETSR
ATNSIEISPTIIVDEIQDSSTSQSQDEPSLEGLANVTILLEQANQRSNDE
LQSETPIATQTSPNAALPFVYDDQMRKIEVKSSINEARCRAEGRIKDRKK
LIDARNQKRQDLLAKIHEYSLLTGDDCYVQFQHAQQKTVARYTSTKEYMS
KLKHANSLPAFDNDGGINIEIPNGEILETLDIKITKRQQQTVVSIGEKLS
NDPSANANNAGHVAPMNKRTIKNATKPKPSPAKKSKTSKK
Run BLAST on NCBI

transcript from alignment at scaffold_282:238314..242238-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056778 ID=TCONS_00056778|Name=TCONS_00056778|organism=Clytia hemisphaerica|type=transcript|length=3925bp|location=Sequence derived from alignment at scaffold_282:238314..242238- (Clytia hemisphaerica)
CCATTTTTTAACAACGAGGTAGATAATAAACCCATGTTATAATTTTCTGC AGCAAATAAAAAAAAACAAATACAAAAAAATACAAACGAAAGTAAAGAAA GATGGAAAACAAATTGGAGAATATACCATATGTATTTGACGAGCAATTGC AAAAGGTTGAGATCAAACCAAGGAATCAAAAGAAGTACAACAAAGATGTG ACCATCTACTATGGTAAACAAACAAGAAACCGAACAACTGATGAACTCAT CGCCGATCCTGCAAAGTTAGCTAATACACGATACGGTAGACGGAGCGGTA ATTCTCATTTTCTTTTTTTTCTCTTCGATTTTTTTAGCAATACCAATTTG AGCAATCGCCAAATATTTACAGAAACATCCAAAATATAGAGCTGTTCAGC CACATGTTTGTTTATCACTCAGAACTCCTGTTTCTAAGTAAATTGATTCT TTTGTCAGTATGGAATAATAAGCAGATATTCAATAGGTAAAAGTTAATAA ATCCAATAACCAACGAAAACCTATTGAATATATGTTTTATTATATGCCTA GAGGCAAAAACAAAACATAAATCATGTAAATAGTCGAAAGATTCACATAA AACACTCCCATAATCGAACGTTCGAATGTTTTTCTTTTTTAATGATTTTC TTAATTACTTTGAGTCATAAAATTTGTTCATCCCCTCATGATTTATAACT TTATTCTAATTATGAATTGAAAAATCTATGACTAGTGATTTTGAAATTTA TTTTTTCAATTATATCGTTAGCAGAGGGGACCGTAGCTGTGATCCGATCT TCATACGTAGAGTGCTAAGAAACAGAGGTCCCTTGAATTGCCCTGCTTCT TAAAGAAGACGTTGTACACGTTTTTATAAGACTGTCAAAAACTTCTTTGG CATCAAACCTGATCAAACCTAAAAATGCTCTAAAAATGTTCTTATTTTCA ACATTTTAGCGAGTAACTTGGTTTTTTAAGAAATTGCATGTGTTTTTAGA GTCTGTAAAGCTTTAAAACGTCTTGGAATGTTCTTAGAGCTAAGCATCTT ATTCTTATATAAATAAAACTTTGATATAAAAAACGTGTATATGTTTTCTT GGTGTTTTCCCAGGGAAAAATGATATCATGTTAATGGATGTATACTTAAC CCATCTAGTATATTTTATTTTTCAGGACTTCTTATGAAGGTTTTCCAATA CAACCTAGTGACAGGTGATCATTGTTATATCGAATTCGAACATGCAAAAT TGAAAACCGTTTCCAAGTACAGCTCATCTTTGGAACACATGATCAAAATG AAGAATCTTCATCTTCATGAGACAAGTAACTCATCCACGGAACCAGTACA ATTTCTTATAGTTGAACAACCATCTGAACCATCCATACAATCACCAGATG AAAACAATTCATCAGAATCAGTATCAATGACCGAGCATGATGCTACAGCG AATGGCGATACAGGAGAAATGCCAAACTCGCAAGAAACTGTGGTCGGCAC TTCCCAGATTTCCAATAATATGGTTTTAGATGAGTATGGCTACTATAGAC CACAGCCGTTCCTCTATGACGAGACATTGAGGAAATTTAATATAAAAACA AAGTCAAAAAATATTAAGAACTCAACGAAAGAAAAAACGATTGCTAATGG AAGTAAGACGAGATGTAGGGCGGAAGGGCGTATCACAGATCCAAAGAAAT TGAGTAATGCTCGATGCGGAAGAAGCAGAGGTAATTGAAGCTCCCTCTAA TTCGATTTTTAAGGGACCACAAAAAACTTCTTCAAATTAAAAAATGAATC GAATTAGGTTCTACTTAAAAAAATAGTCGGTCGGCTGTCGGCAAACCTAC ATTTTTAAAAGTCCAGCCTTACAGAGATTATTTTATACTACTTCTTAGCT GAGCGGGACAAATATTTAAGTTCGAATGTTTTAGAAGGTTCGAATTAGAG GGAGTTGACTGTATTTCTTTTTATCGTTTGAGGCTATAAGACCAAAAGAA TCGGAATTATATGTGTTTTCAGACTTGTTTTTTCACGTCCAATCCTAGTG GATTTCTTTTCACACTTGTTTTCGCCACGTATAATGTTGTAACAATTATT TTTGTCCAAAATATGGTGTCTGGTTGAAGCGTGCTCATTTTTTCTTACAG GGCTCCTGACATCCATTTATCAATACAGCCTTATGACAGGTGATAGTTGT TACATTGAATTCGAACACGAAGAAACGAAAGTTGTATCAAAATACAGTTC ATCGATCGAATACATGATAAAGGTTCAAAACAGATTCTCTAACAATATAA ACACTACCTTTGGAACAATGGTCGAATCTCTGGTCAATTATGATGCAGGA TCGCAAGTGGTTACCAAACAGTCGATACACAGATCAACAGTCAGAAAAGC CGAGGTACAAGATGTGCAGAGATATGTAGGTGAATCGGAAACTTCAAGAG CAACCAATTCCATAGAGATTTCACCAACAATTATCGTAGATGAGATTCAA GACTCATCAACTTCACAATCTCAAGACGAACCATCTCTAGAGGGACTAGC AAATGTGACCATATTGTTGGAACAAGCTAACCAACGATCAAATGATGAGC TGCAATCTGAAACGCCCATAGCCACTCAAACGTCGCCAAATGCCGCCCTT CCGTTCGTCTATGATGACCAAATGAGGAAAATCGAAGTCAAATCCTCAAT AAATGAAGCAAGATGTAGGGCGGAAGGGCGGATTAAAGATCGGAAGAAAT TAATCGATGCTCGAAATCAAAAGCGGCAAGGTACGTTCTAGATATACTTG ATATTTAATTCCTCTGTCTTTGCATCCTATTCAGGATTGGCGCAGACATC CCTCTAAAAGGTTTTAAGATCGAAAAATATAGCCTTTTAAACTATCTGAA GGTCTTTTTTTAAGGTCGTTTAAAATCCATCCAACATAAAATTTTTGATG TTTTTTAAATGTCCGGCCAACATTTCGTTCAACAATTGATTTGAAATGCG TTTGAATGAGATGTTAGATTGATTTGCGCCAGCCTTTACATTGGTCTTTC ACCAGACCATTTGTTGTTTTTGTCCGTCTTAAAATTGCATCAGGATTCAC TTAAAAGTGTATTTCATTTTCATTTTTCTCAGATCTCTTGGCCAAGATTC ACGAGTACAGTCTTTTAACGGGCGACGATTGCTACGTCCAATTCCAACAC GCACAACAGAAAACCGTCGCACGATACACATCAACAAAAGAGTACATGTC GAAATTGAAACATGCAAATTCTTTACCCGCTTTTGATAATGATGGAGGGA TTAATATAGAAATACCGAATGGTGAAATATTAGAGACTTTGGATATAAAG ATTACTAAAAGACAACAACAGACAGTCGTTTCCATTGGTGAAAAACTTTC AAATGATCCGTCCGCAAATGCTAATAATGCTGGCCATGTTGCACCGATGA ATAAACGGACTATAAAAAATGCTACAAAACCTAAACCTTCTCCGGCTAAA AAATCGAAAACATCGAAAAAGTAAATATGCGTCGAATTTTGTGACATTTT GTGGCATTTTGGTATTTGTCGTAAATCTTTTGATGAAGTGAGAGATTTCT GGTAATAAGAACGAAAAACATGCTTGATCTTATTATCGTAATACTGATGT ACATTTATAGAACATCCATGGAATCTTTTGATGGGTGTATTTCCTATTTA TATGTTGGAGAAGGCATTCTCACAGTCTTCAACGACAACACTAGCTAGCT CTTATATTATTTAGATTTGATTTACACGGGTGACAAGCCTTTGTGCTACA TTTCTTTGTAAGTTTTTTTTCATTTTATGTACCAGTGGATACCCCTTAAA ACCCACAATAAAAAGTGGTACCCTCTATCTCATTGTTTAGTTGGAGTGTA AGGCTGAAACTTTTTGTGTTGAAAG

Coding sequence (CDS) from alignment at scaffold_282:238314..242238-

>TCONS_00056778 ID=TCONS_00056778|Name=TCONS_00056778|organism=Clytia hemisphaerica|type=CDS|length=7092bp|location=Sequence derived from alignment at scaffold_282:238314..242238- (Clytia hemisphaerica)
ATCTCTTGGCCAAGATTCACGAGTACAGTCTTTTAACGGGCGACGATTGC
TACGTCCAATTCCAACACGCACAACAGAAAACCGTCGCACGATACACATC
AACAAAAGAGTACATGTCGAAATTGAAACATGCAAATTCTTTACCCGCTT
TTGATAATGATGGAGGGATTAATATAGAAATACCGAATGGTGAAATATTA
GAGACTTTGGATATAAAGATTACTAAAAGACAACAACAGACAGTCGTTTC
CATTGGTGAAAAACTTTCAAATGATCCGTCCGCAAATGCTAATAATGCTG
GCCATGTTGCACCGATGAATAAACGGACTATAAAAAATGCTACAAAACCT
AAACCTTCTCCGGCTAAAAAATCGAAAACATCGAAAAAGTAAGGCTCCTG
ACATCCATTTATCAATACAGCCTTATGACAGGTGATAGTTGTTACATTGA
ATTCGAACACGAAGAAACGAAAGTTGTATCAAAATACAGTTCATCGATCG
AATACATGATAAAGGTTCAAAACAGATTCTCTAACAATATAAACACTACC
TTTGGAACAATGGTCGAATCTCTGGTCAATTATGATGCAGGATCGCAAGT
GGTTACCAAACAGTCGATACACAGATCAACAGTCAGAAAAGCCGAGGTAC
AAGATGTGCAGAGATATGTAGGTGAATCGGAAACTTCAAGAGCAACCAAT
TCCATAGAGATTTCACCAACAATTATCGTAGATGAGATTCAAGACTCATC
AACTTCACAATCTCAAGACGAACCATCTCTAGAGGGACTAGCAAATGTGA
CCATATTGTTGGAACAAGCTAACCAACGATCAAATGATGAGCTGCAATCT
GAAACGCCCATAGCCACTCAAACGTCGCCAAATGCCGCCCTTCCGTTCGT
CTATGATGACCAAATGAGGAAAATCGAAGTCAAATCCTCAATAAATGAAG
CAAGATGTAGGGCGGAAGGGCGGATTAAAGATCGGAAGAAATTAATCGAT
GCTCGAAATCAAAAGCGGCAAGGACTTCTTATGAAGGTTTTCCAATACAA
CCTAGTGACAGGTGATCATTGTTATATCGAATTCGAACATGCAAAATTGA
AAACCGTTTCCAAGTACAGCTCATCTTTGGAACACATGATCAAAATGAAG
AATCTTCATCTTCATGAGACAAGTAACTCATCCACGGAACCAGTACAATT
TCTTATAGTTGAACAACCATCTGAACCATCCATACAATCACCAGATGAAA
ACAATTCATCAGAATCAGTATCAATGACCGAGCATGATGCTACAGCGAAT
GGCGATACAGGAGAAATGCCAAACTCGCAAGAAACTGTGGTCGGCACTTC
CCAGATTTCCAATAATATGGTTTTAGATGAGTATGGCTACTATAGACCAC
AGCCGTTCCTCTATGACGAGACATTGAGGAAATTTAATATAAAAACAAAG
TCAAAAAATATTAAGAACTCAACGAAAGAAAAAACGATTGCTAATGGAAG
TAAGACGAGATGTAGGGCGGAAGGGCGTATCACAGATCCAAAGAAATTGA
GTAATGCTCGATGCGGAAGAAGCAGAGATGGAAAACAAATTGGAGAATAT
ACCATATGTATTTGACGAGCAATTGCAAAAGGTTGAGATCAAACCAAGGA
ATCAAAAGAAGTACAACAAAGATGTGACCATCTACTATGGTAAACAAACA
AGAAACCGAACAACTGATGAACTCATCGCCGATCCTGCAAAGTTAGCTAA
TACACGATACGGTAGACGGAGCGATCTCTTGGCCAAGATTCACGAGTACA
GTCTTTTAACGGGCGACGATTGCTACGTCCAATTCCAACACGCACAACAG
AAAACCGTCGCACGATACACATCAACAAAAGAGTACATGTCGAAATTGAA
ACATGCAAATTCTTTACCCGCTTTTGATAATGATGGAGGGATTAATATAG
AAATACCGAATGGTGAAATATTAGAGACTTTGGATATAAAGATTACTAAA
AGACAACAACAGACAGTCGTTTCCATTGGTGAAAAACTTTCAAATGATCC
GTCCGCAAATGCTAATAATGCTGGCCATGTTGCACCGATGAATAAACGGA
CTATAAAAAATGCTACAAAACCTAAACCTTCTCCGGCTAAAAAATCGAAA
ACATCGAAAAAGTAAGGCTCCTGACATCCATTTATCAATACAGCCTTATG
ACAGGTGATAGTTGTTACATTGAATTCGAACACGAAGAAACGAAAGTTGT
ATCAAAATACAGTTCATCGATCGAATACATGATAAAGGTTCAAAACAGAT
TCTCTAACAATATAAACACTACCTTTGGAACAATGGTCGAATCTCTGGTC
AATTATGATGCAGGATCGCAAGTGGTTACCAAACAGTCGATACACAGATC
AACAGTCAGAAAAGCCGAGGTACAAGATGTGCAGAGATATGTAGGTGAAT
CGGAAACTTCAAGAGCAACCAATTCCATAGAGATTTCACCAACAATTATC
GTAGATGAGATTCAAGACTCATCAACTTCACAATCTCAAGACGAACCATC
TCTAGAGGGACTAGCAAATGTGACCATATTGTTGGAACAAGCTAACCAAC
GATCAAATGATGAGCTGCAATCTGAAACGCCCATAGCCACTCAAACGTCG
CCAAATGCCGCCCTTCCGTTCGTCTATGATGACCAAATGAGGAAAATCGA
AGTCAAATCCTCAATAAATGAAGCAAGATGTAGGGCGGAAGGGCGGATTA
AAGATCGGAAGAAATTAATCGATGCTCGAAATCAAAAGCGGCAAGGACTT
CTTATGAAGGTTTTCCAATACAACCTAGTGACAGGTGATCATTGTTATAT
CGAATTCGAACATGCAAAATTGAAAACCGTTTCCAAGTACAGCTCATCTT
TGGAACACATGATCAAAATGAAGAATCTTCATCTTCATGAGACAAGTAAC
TCATCCACGGAACCAGTACAATTTCTTATAGTTGAACAACCATCTGAACC
ATCCATACAATCACCAGATGAAAACAATTCATCAGAATCAGTATCAATGA
CCGAGCATGATGCTACAGCGAATGGCGATACAGGAGAAATGCCAAACTCG
CAAGAAACTGTGGTCGGCACTTCCCAGATTTCCAATAATATGGTTTTAGA
TGAGTATGGCTACTATAGACCACAGCCGTTCCTCTATGACGAGACATTGA
GGAAATTTAATATAAAAACAAAGTCAAAAAATATTAAGAACTCAACGAAA
GAAAAAACGATTGCTAATGGAAGTAAGACGAGATGTAGGGCGGAAGGGCG
TATCACAGATCCAAAGAAATTGAGTAATGCTCGATGCGGAAGAAGCAGAG
ATGGAAAACAAATTGGAGAATATACCATATGTATTTGACGAGCAATTGCA
AAAGGTTGAGATCAAACCAAGGAATCAAAAGAAGTACAACAAAGATGTGA
CCATCTACTATGGTAAACAAACAAGAAACCGAACAACTGATGAACTCATC
GCCGATCCTGCAAAGTTAGCTAATACACGATACGGTAGACGGAGCGATCT
CTTGGCCAAGATTCACGAGTACAGTCTTTTAACGGGCGACGATTGCTACG
TCCAATTCCAACACGCACAACAGAAAACCGTCGCACGATACACATCAACA
AAAGAGTACATGTCGAAATTGAAACATGCAAATTCTTTACCCGCTTTTGA
TAATGATGGAGGGATTAATATAGAAATACCGAATGGTGAAATATTAGAGA
CTTTGGATATAAAGATTACTAAAAGACAACAACAGACAGTCGTTTCCATT
GGTGAAAAACTTTCAAATGATCCGTCCGCAAATGCTAATAATGCTGGCCA
TGTTGCACCGATGAATAAACGGACTATAAAAAATGCTACAAAACCTAAAC
CTTCTCCGGCTAAAAAATCGAAAACATCGAAAAAGTAAGGCTCCTGACAT
CCATTTATCAATACAGCCTTATGACAGGTGATAGTTGTTACATTGAATTC
GAACACGAAGAAACGAAAGTTGTATCAAAATACAGTTCATCGATCGAATA
CATGATAAAGGTTCAAAACAGATTCTCTAACAATATAAACACTACCTTTG
GAACAATGGTCGAATCTCTGGTCAATTATGATGCAGGATCGCAAGTGGTT
ACCAAACAGTCGATACACAGATCAACAGTCAGAAAAGCCGAGGTACAAGA
TGTGCAGAGATATGTAGGTGAATCGGAAACTTCAAGAGCAACCAATTCCA
TAGAGATTTCACCAACAATTATCGTAGATGAGATTCAAGACTCATCAACT
TCACAATCTCAAGACGAACCATCTCTAGAGGGACTAGCAAATGTGACCAT
ATTGTTGGAACAAGCTAACCAACGATCAAATGATGAGCTGCAATCTGAAA
CGCCCATAGCCACTCAAACGTCGCCAAATGCCGCCCTTCCGTTCGTCTAT
GATGACCAAATGAGGAAAATCGAAGTCAAATCCTCAATAAATGAAGCAAG
ATGTAGGGCGGAAGGGCGGATTAAAGATCGGAAGAAATTAATCGATGCTC
GAAATCAAAAGCGGCAAGGACTTCTTATGAAGGTTTTCCAATACAACCTA
GTGACAGGTGATCATTGTTATATCGAATTCGAACATGCAAAATTGAAAAC
CGTTTCCAAGTACAGCTCATCTTTGGAACACATGATCAAAATGAAGAATC
TTCATCTTCATGAGACAAGTAACTCATCCACGGAACCAGTACAATTTCTT
ATAGTTGAACAACCATCTGAACCATCCATACAATCACCAGATGAAAACAA
TTCATCAGAATCAGTATCAATGACCGAGCATGATGCTACAGCGAATGGCG
ATACAGGAGAAATGCCAAACTCGCAAGAAACTGTGGTCGGCACTTCCCAG
ATTTCCAATAATATGGTTTTAGATGAGTATGGCTACTATAGACCACAGCC
GTTCCTCTATGACGAGACATTGAGGAAATTTAATATAAAAACAAAGTCAA
AAAATATTAAGAACTCAACGAAAGAAAAAACGATTGCTAATGGAAGTAAG
ACGAGATGTAGGGCGGAAGGGCGTATCACAGATCCAAAGAAATTGAGTAA
TGCTCGATGCGGAAGAAGCAGAGATGGAAAACAAATTGGAGAATATACCA
TATGTATTTGACGAGCAATTGCAAAAGGTTGAGATCAAACCAAGGAATCA
AAAGAAGTACAACAAAGATGTGACCATCTACTATGGTAAACAAACAAGAA
ACCGAACAACTGATGAACTCATCGCCGATCCTGCAAAGTTAGCTAATACA
CGATACGGTAGACGGAGCGATCTCTTGGCCAAGATTCACGAGTACAGTCT
TTTAACGGGCGACGATTGCTACGTCCAATTCCAACACGCACAACAGAAAA
CCGTCGCACGATACACATCAACAAAAGAGTACATGTCGAAATTGAAACAT
GCAAATTCTTTACCCGCTTTTGATAATGATGGAGGGATTAATATAGAAAT
ACCGAATGGTGAAATATTAGAGACTTTGGATATAAAGATTACTAAAAGAC
AACAACAGACAGTCGTTTCCATTGGTGAAAAACTTTCAAATGATCCGTCC
GCAAATGCTAATAATGCTGGCCATGTTGCACCGATGAATAAACGGACTAT
AAAAAATGCTACAAAACCTAAACCTTCTCCGGCTAAAAAATCGAAAACAT
CGAAAAAGTAAGGCTCCTGACATCCATTTATCAATACAGCCTTATGACAG
GTGATAGTTGTTACATTGAATTCGAACACGAAGAAACGAAAGTTGTATCA
AAATACAGTTCATCGATCGAATACATGATAAAGGTTCAAAACAGATTCTC
TAACAATATAAACACTACCTTTGGAACAATGGTCGAATCTCTGGTCAATT
ATGATGCAGGATCGCAAGTGGTTACCAAACAGTCGATACACAGATCAACA
GTCAGAAAAGCCGAGGTACAAGATGTGCAGAGATATGTAGGTGAATCGGA
AACTTCAAGAGCAACCAATTCCATAGAGATTTCACCAACAATTATCGTAG
ATGAGATTCAAGACTCATCAACTTCACAATCTCAAGACGAACCATCTCTA
GAGGGACTAGCAAATGTGACCATATTGTTGGAACAAGCTAACCAACGATC
AAATGATGAGCTGCAATCTGAAACGCCCATAGCCACTCAAACGTCGCCAA
ATGCCGCCCTTCCGTTCGTCTATGATGACCAAATGAGGAAAATCGAAGTC
AAATCCTCAATAAATGAAGCAAGATGTAGGGCGGAAGGGCGGATTAAAGA
TCGGAAGAAATTAATCGATGCTCGAAATCAAAAGCGGCAAGGACTTCTTA
TGAAGGTTTTCCAATACAACCTAGTGACAGGTGATCATTGTTATATCGAA
TTCGAACATGCAAAATTGAAAACCGTTTCCAAGTACAGCTCATCTTTGGA
ACACATGATCAAAATGAAGAATCTTCATCTTCATGAGACAAGTAACTCAT
CCACGGAACCAGTACAATTTCTTATAGTTGAACAACCATCTGAACCATCC
ATACAATCACCAGATGAAAACAATTCATCAGAATCAGTATCAATGACCGA
GCATGATGCTACAGCGAATGGCGATACAGGAGAAATGCCAAACTCGCAAG
AAACTGTGGTCGGCACTTCCCAGATTTCCAATAATATGGTTTTAGATGAG
TATGGCTACTATAGACCACAGCCGTTCCTCTATGACGAGACATTGAGGAA
ATTTAATATAAAAACAAAGTCAAAAAATATTAAGAACTCAACGAAAGAAA
AAACGATTGCTAATGGAAGTAAGACGAGATGTAGGGCGGAAGGGCGTATC
ACAGATCCAAAGAAATTGAGTAATGCTCGATGCGGAAGAAGCAGAGATGG
AAAACAAATTGGAGAATATACCATATGTATTTGACGAGCAATTGCAAAAG
GTTGAGATCAAACCAAGGAATCAAAAGAAGTACAACAAAGATGTGACCAT
CTACTATGGTAAACAAACAAGAAACCGAACAACTGATGAACTCATCGCCG
ATCCTGCAAAGTTAGCTAATACACGATACGGTAGACGGAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035762XLOC_035762Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056778-exon-scaffold_282-1575043694:241942..242238TCONS_00056778-exon-scaffold_282-1575043694:241942..242238Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1575043694:240509..241063TCONS_00056778-exon-scaffold_282-1575043694:240509..241063Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1575043694:239459..240088TCONS_00056778-exon-scaffold_282-1575043694:239459..240088Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1575043694:238314..239106TCONS_00056778-exon-scaffold_282-1575043694:238314..239106Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1510915933:241942..242238TCONS_00056778-exon-scaffold_282-1510915933:241942..242238Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1510915933:240509..241063TCONS_00056778-exon-scaffold_282-1510915933:240509..241063Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1510915933:239459..240088TCONS_00056778-exon-scaffold_282-1510915933:239459..240088Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1510915933:238314..239106TCONS_00056778-exon-scaffold_282-1510915933:238314..239106Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1491911889:241942..242238TCONS_00056778-exon-scaffold_282-1491911889:241942..242238Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1491911889:240509..241063TCONS_00056778-exon-scaffold_282-1491911889:240509..241063Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1491911889:239459..240088TCONS_00056778-exon-scaffold_282-1491911889:239459..240088Clytia hemisphaericaexon
TCONS_00056778-exon-scaffold_282-1491911889:238314..239106TCONS_00056778-exon-scaffold_282-1491911889:238314..239106Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056778-proteinTCONS_00056778-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:238314..242238 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.4974 21.4892 7.87739 5.76753 15.514 12.2187 11.1467 12.8093 8.18907 9.47139 9.12459 6.88093 7.66436 7.68496 7.23181 9.53385 9.56111 10.5484 4.79605 4.53349 7.32078 6.52505 25.673 22.1589 11.5908 13.2831 3.42336 3.32384 15.0747 17.1147
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056778 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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