TCONS_00056952 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056952
Unique NameTCONS_00056952
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056952 ID=TCONS_00056952|Name=TCONS_00056952|organism=Clytia hemisphaerica|type=transcript|length=2107bp
TCGGCGGTAGAATCGTTTTTACACGTCCATTCTTGTTATAATATTCGAAT
GATTTTGTTTTAGGAGATTTCATTTNATTTACACGTCCATTCTTGTTATA
TATTCGAAGGATTTTGTTTTAGGAGATTTCATTTTTAGTGGGATTCATAT
ATACAATACTTGGAGGCCACGGTATCATTTTCTTATTGTTTTAGTGGGTA
AAAGACGATAAATATTCTCATAAACTAAAAAACCATGGCTGCTCCTATAC
AACAAATTTCAAATGGCGCTATACCAATTATGTCTGGTGTTGCAGGAACT
CCAGTTCAACAGCCAGCTGTTGTttaccaacaacaacaaccaatgATTGT
CGCAGGTGCTGCTCCGATGGGTTACGCACCACGAAAGCCCTACATCAGGA
ATCCGAATGAGGAGCATTGCAAAATCTTTGTCGGAGGTGTTGGTAAATTG
ACAAATGATGAATCTCTTAGAGCCTACTTTGGAAAATTCGGAGAAATTGC
AGATAGTGTTATAATGAAAGATAAACATACAAATGAGCCAAGAGGGTTTG
CATTCGTCACATTCAAAACACCAGAAGCTGTTTCAGCTGTCATTGAACAA
AATAATAAAGGTGGACATACTCTTGATGGAAAAATGTTTATTGAAGTACG
AAAGTTCCAGAGAAAATCTGAGtatgACCCAGATAAGGCCAACACAACTC
TTACTACTGCCAATGGTGCTGCACAACTTAACTTTCAATACAAAGGTCCA
ATGAAGTGCTCACCAGAAATGAAAGTTTTTGTTGGTGGAATTGGTATTGG
TACAACAGAGGATGatgtaaagaaatattttgaacaatttgGAAAGGTCC
TTGCTGTCGATATGCCTGTTCATCATGTGTATAAATGTCCCAAAGGCTTT
GCATTTGTTGGATTTGAGACATTTGATGTAGTTGCAGCTGTAACAAAAGA
TCGATATCATCAGATAAATGGAAAAACGGTCGAAGTAAAAGGCTCAGATG
AGCAGCAAGCACATTTGAACAAAAAGAAGGCTGAAGGTATGACTATCCGG
TATGCTTCTGCTGGAAGAGGTAGAGGAATTGGATCAGGAAATATTGGAAC
AGTGACAGGATACGGTGCATATGCAAACCTTGGTCAACCATTAATCGTAA
ACCCTGCTCAACATAGTGTACAATATACAGtTCCTGCTGCAGCAACTGGT
GGATATGTGTATGATCCCGCATCTAATACGTATTATCAACTCCCTGGAAC
TGTCGTCGCTGGTGGTGCAGTTGCAGGTGCAGTGCAAACGGTAGGAACCT
CAGTCGCAGCTGCCTCCCCATACGCTGGTGCAACCATCGCAGCAGGTCAA
CAAGTCTTAACTTCTCCACAAGTTGGTCAGCGAACGTTACAAGCAACTGA
TATGATCCAAGGACTAGCAGCAGGCTCAACAGTTGCCTTGGGCGCAGCGT
ATCCAAGCGAAACATCAACCTTTGGGCCAACTCGACATAACGTGATCGGA
GCCAGTGCGCAACAACCGATGGCAGGAAACACAGTCGCCGATCCTCACGT
CGTCTATTCTACAGCAACATCTATTTCTGCTGGCGATGCTGCTTTGTCAG
CGGCTCGTGGTTACCACCCTTATGGAAGATAAGATATTGAacttcaaaac
tgaaaaaagagaCTTCAATCGTACTTTGATCTGTACGTAAAGAAGAAAGC
TTTGAAAGACTCGATCTTCACTCATGGACAGcgattttgtaaataaaaac
ttttttaatctattgattgattgatgctTTGTCAGTTGGTTCTTCGATAC
GTGATAATCATATTGCTCTTTGGTGACAATTCGGTTTTataaatgaaaag
acattttattGGATTTGTCTACGCCATGCACAATGGATGTAGATATTTTA
CGCGATAATTTCATTTGAATGAACAATTTTTAACGTGAGAACTTTATGGA
CATGCGCGatatttctctctttttatttgaaagaaaatttattcaatgga
attacaaaatattttgattgtttatccatttcttatttttttatcgGAAT
TTTCTTTACTTACTATTGAGTCCACTTCCACATCAGCTTAGTTTGAGATG
TGTAGGG
Run BLAST on NCBI

transcript from alignment at scaffold_284:879845..888854-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056952 ID=TCONS_00056952|Name=TCONS_00056952|organism=Clytia hemisphaerica|type=transcript|length=9010bp|location=Sequence derived from alignment at scaffold_284:879845..888854- (Clytia hemisphaerica)
TCGGCGGTAGAATCGTTTTTACACGTCCATTCTTGTTATAATATTCGAAT
GATTTTGTTTTAGGAGATTTCATTTNATTTACACGTCCATTCTTGTTATA
TATTCGAAGGATTTTGTTTTAGGAGATTTCATTTTTAGTGGGATTCATAT
ATACAATACTTGGAGGCCACGGTATCATTTTCTTATTGTTTTAGTGGGTA
AAAGACGATAAATATTCTCATAAACTAAAAAACCATGGCTGCTCCTATAC
AACAAATTTCAAATGGCGCTATACCAATTATGTCTGGTGTTGCAGGAACT
CCAGTTCAACAGCCAGCTGTTGTTTACCAACAACAACAACCAATGATTGT
CGCAGGTGCTGCTCCGATGGGTTACGCACCACGAAAGCCCTACATCAGGA
ATCCGAATGAGGAGCATTGGTAANTTACGCACCACGAAAGCCCTACATCA
GGAATCCGAATGAGGAACATTGGTAAGGGAGCTTTTGAAAAATTGACTTT
TTAATTTATCCATTATACAGTTATACTTGAAAAAAAGAGCTCTGGGAAAA
TAACCATTGTGTCTTCAAAAGACCAACTGTATTAGTTCCATAGGGAAAAA
TTCATGGTTGTTGGACTTGCAAATACGTGTGTCAGTGTACCAATCAAAGG
AAATTCGTTTTTACCAATGTTACTTTTTTCTATATCTAAAGAATTAGTAA
ACGTTTTAAAATCTGTAAAAAGCTCTCTACTCCCAAATAGTTCTAGATTA
CCAGACAATCTCAATCAAACAGAATCGACGATCGAACCAGTCGAATGCAA
TCGAATCTCAATCGAGCGTCAAAATTCTGGGTAATATTCGATAGGTTCGA
TTGTTGTTCAACTGGTTCGATTGTCGTTCAACTACATTCGATTGTTTGAG
TGAAACAAGGCATGTCCTAAATATATTTTGCGTGATGCGCACCGCTTCCC
GTTATTCCTCCTTAACTCTCATATATAGCTCAAAAGAATCGAATCAACAA
GAGGATTTCGAAAAGGGTCAGCTTTTTAACAAAGATTAGTCTCTCTAAGG
GTCAGGTCCTAATCAAACGCAATCGAACATCAATCGAACGCAATCGAATA
TCAATTGAATCTGAAAATTGTGAGATTCAATCGCGTTCGACAATCGAATT
TCAATCGGTCGATTGCGTTCGATTTGGTTCGACTGGTTCGATCGTCGATT
CCATTTGATTGAGATCGTCTGGAGATGAAACCCTGCAAAAACCATGTTCA
ATCTTATCGTTTCGTTGGTATTGGAAACCAAGGAAATTCGCAAAAAATTT
ATTTCTCCCTTTTTTAGCAAAATCTTTGTCGGAGGTGTTGGTAAATTGAC
AAATGATGAATCTCTTAGAGCCTACTTTGGAAAATTCGGAGAAATTGCAG
ATAGTGTTATAATGAAAGATAAACATACAAATGAGCCAAGGTAAGTGTCA
GCATAAACATATAAACAACTGGACATCCATCTCCTTTCTTGTATTTTTGA
AGATAACACTGCTAGCTTCGTTGCCGCCTCATTAAAATCATAAAACCTAA
CAATAAATTTTGGTATACCTCTTGGGAATACCTTGGTAAAACCTCAAAAC
TTCAACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTATCTATATCA
TAACCAAGATAACTGAGGCAAAATCATTGTCAGCTTGTCAAAATTCTGAC
TAATATTTTTAAATTTAGACTCAAAAGTATGGAATAATTTTAGAGAGTAT
GGGATTCAAATTATGATAATCTCATGGTACAGGCTCTCAACTTTGGCGTA
CTATTTTTTTCATGTCATAAAAAAATTATTAGAGTGACAAAAGGGATGCA
AAAGTATACACGCAGTTGATAAAATACTTATGCAATGTCAAGCTCTATCA
ATCCTTTTACCTTAGTAATTCCAATAAAATGAAATTGTGACGGAATATTG
TAGAATTTTATATATCAATCAGGGCTGCAAATAAGCATCGGTCATCGGTC
AATGTCCGACTGAAAAAGCCATTTGACCGACTGAAAATCATTTGTGTCGG
TCATGATGTCCGAATGAAAAAAAAACATTAATTTGAGTTGAAAACAAATC
TTTCACACCCCTGTCTCTTTGTCTATTATTACTACTCTTTTACTTTCTTT
TAGCTTTCAAGAGTGTTTCTAAAGTTTACTTTGATTTCATGCGTTTTTAT
TTTTATCGACTTGCTTTCTTTGTAACTTTCATCAGTGTTTCTAAGTTCAC
TTTTTATTGACTTGCTATCTTTGTAAACTTTCAAGAGTGTTTATAAGTTC
ACTTTTTATCAACTTGCTTTCTTCGTAACTTTCAAGAGTGTCTCTAAGCT
CACTTTTATCAACTCGTTATCGTTGTAACTTTCAAGGGTCTTTCTAAGTT
CACTTATATCGCATTGCTTTCTTCGTAACTTTAGAAGTTCCAAGGTCACT
TTTACCTACTCTCTTTCTCCATAACTTTCAAGACTGTATGATTTCAGAAA
ACTTATAGACTGAATGACCGACAGGATTTAGAGCTTGACCGACAGAATTT
CATCTCAGTCCCGACATGATGTCTGATTGACTAGAAATATTTATTTGCAG
CCCCGATCAATTTTTTAATACAGTGGGTAACAAAGCTCGCTTCAAAGACA
CAATGGAAGATAGTCGTCCAGTCGTTTATATGTTCAGACAAAAAATTTGA
GCCTTGCTAACAGTATCTTATGAAAAACTTTGTTTTAAAAAACGTTTTAA
ATTAAAAAAGCAATGGTGAAATGCTGAGTCAGCAGAAAAGTAAATTGCTG
TTTTTGGAAGGAACTTATGCATTGAGCAATGATCATCTAAAAAAATTACT
TTCCAAAACTCCAAAAAAGAGCAATAATTGCTGTTTTTATCTCATATACC
CCACTGTATATTTTCAGACTGAAGAGAAAAACCCTTTTCTTTTGTTATTT
CATGATATCTTTTACCTGTTCATTAATTTCACAGAGGGTTTGCATTCGTC
ACATTCAAAACACCAGAAGCTGTTTCAGCTGTCATTGAACAAAATAATAA
AGGTGGACATACTCTTGATGGAAAAATGGTAGGTTGTAATGTCTGAAAGA
AACTCTACATTATATAATGACAAGAAAAAAATGACGTTTCTATAAGAGAA
TCATTCTGTGTTTTTTATACATTTTGGCACACCTGCAATATTGCCAATAT
ATTGAAGTAGTTTTGGTTTCATTTTTAAAACTTAATTTGGTTGCTTCATA
CAGAGAAGTAGGATGAAATAGAAAACCAGCTTCCTTGACTACCCCATGCC
TTTGTTTTAGCTTTATTAATAAGGTTAGTTTGATTAGGAAAAGTTGAAGA
AAAGATGGCTTGTCCTAAAAATGGCTGGCCATAAAAGTGGATTTGCGTTT
TACATTTGTGCACCTACCTGCTTTTCAATAAGATGTGCGCAATCCCGTGT
GAAGTAGCAAATTTTACACCATTTTATTGCCTAAAAATTCTCGTTGTAAT
GATATTGATTTGTTTCAATAATATTTGGTCCAGTTTCGGGGAAAGCAATC
ATTAGAATTGTTAATGTTAGGATATTGTGAGCAAGAAAATAGGTATCTTG
TGGTCTGAGTGAGGTGTTCCCAAAATATAAGCCCCTAAAGTTTAAGCCTA
ATTAGACTCAAACAAAAGACTTCCACCACATCACCTCCCTTAAGGGCAAA
GGACCTGGTACATGACGAGCCGTGTCTTCAAGAAGCTGTTTTTCTATCTC
ATTGCACTTCTCTGCTTCATATCTTTGATATCTGGGTTGAAAGAAAAATT
ATAAAAAATTATATTTTGTTTGTATTGAGCCTTTCACTGACACTGCTGAG
ATGGATTGAAAATATGTTATTTTGAGTTTGGAACAGGTTGGAAACATTTG
TTTGAGGCTAGGAAGGTCTGGAAGATAAAAGAGTTCTTTTTTCTTTCCTT
TACATAGTTTATTGAAGTACGAAAGTTCCAGAGAAAATCTGAGGTGAGAT
CAAGTTTCTGACTTCATTATTGTTGTTATTCTTTGAAGGTTGATCCTAAG
CCAGCTGTCCCTCAAGGTCCTGGAGTTCAAAATAAACCCTTGGTAAGTTT
TTTAAGTCAGTCGATCTCTGGATCTTTGATATTAATGCCCTATCTACTTG
ATTTTTACTGAATGACACAAGATGAGTCTTAGACTTTTGTTTATTTATTT
TTTGTCTCATTACAGTTTTTGAATATTTTTCATTTTCAGTATGACCCAGA
TAAGGCCAACACAACTCTTACTACTGCCAATGGTGCTGCACAACTTAACG
TAAGAATTAAAAATCTTGGTATCAATATTGTTACATTTTGCATGCAAGTC
AGTTTCAAATTATGTCTAAATCAGCAATGCCCTCAATTGAAGTTGATAAA
TGCTTTGCTATGACCACTGGTGTTTGATCAATAATTTAAATCAAAACTTT
TCTTTCTTGAACAGTTTCAATACAAAGGTCCAATGAAGTGCTCACCAGAA
ATGAAAGTTTTTGTTGGTGGAATTGGTATTGGTACAACAGAGGATGATGT
AAAGAAATATTTTGAACAATTTGGAAAGGTAATTTGAACTTTTTTCTCTT
CAAATACTCCTTCAAAATTAAAAAAACAAGGAATGTTTTGAAAATAAGAC
ATTTAAAAATCTTAATTTCTTATCCTTCAGGTCCTTGCTGTCGATATGCC
TGTTCATCATGTGTATAAATGTCCCAAAGGTATGTTTATTATTCAGAATT
TCGGACTTTATGCCCCTCAAATATCCAAGTTTACGAAAATCACCATATTT
TTTGATCCACACAAAAACAATTAACAATGCAAAAAAGTTTAACCCACGCA
AATAAATTTTTGAACTTCGCAAAAAAAAATTTGACCGTCCATAAAAAAAT
TCTACCCACATGTCCATTCAACCCAAGCACCCACTCAACCCACACCCGTC
AAATCCATACCAGGGTAGAATAACTGATTTTAGAGAGGGCTAACTAACTG
TGATTTAAAACTTAATCATTTTCCTTTCCAACAATTTGTTGACTAGGCTA
TAAAAAAAAAAAAATTCTATCAATTCATTTTCTGCTACATCTGGTTGTAA
TCATACTTACAAATTCCTTAAAATTTTGTTTTGGTATATATGTTTTTGAT
AAGGGATATGGTTATGAAGTATAAGCTTTTCTTGGACGGGTAACTGACCT
CAACTTGTCCGTGCACAAGATTACTATCATCCCTATTACTATTTTCAGCT
TTCTATCTGCTTGAGCCAATTTTATTTTATATTGATTTATAATTAGTAGA
AACCTAGTTGCACACCTTTGCATTTAACTCTAGACAAAATATATTGACAG
AACTCATATATTTTAGATGTTTAAATATTTACAATTAATGAAAAATAGCC
ACAGCACAACTTAGCCTGTTTTTTAAGTAACCAAAATATTATATTTGAGA
TCAGAATATTAACATTTTGAATAACATTTGACATTACTAGAATTTTTGAC
CTTCAAAATCTAAAAATATATACATCATTTTATGATTTTATACTTAAAAG
TATTTTAACTAAGAACTTAATAGTCCCATATGCCATTAATCAATGTTTTT
GAATGTATGAATTTACTATGTCTTCTTTTTAGCAAAATATTTCTAATTTA
TGATTACCTAATTAGGCTTTGCATTTGTTGGATTTGAGACATTTGATGTA
GTTGCAGCTGTAACAAAAGATCGATATCATCAGATAAATGGAAAAACGGT
GTGATATAAAATATTTTAATGTTGTTTTACCAATTATTTTTTCAATTCTT
CGTAATTTATAATCAATATTTTTAAAAAGTTTCAGGTATTTTCACTATTT
TGACTGACACTGTAACTAATTTTAGTTCAGCTCTTTTCAGAAATTTTACC
ACTATTTTTCTGTTTGTTTCTAGCCTTAGACTTTAATATTGTTTGAATGT
TATTTTGCAATCATTTGTTCAGTATTTTTGTTTTTCTGAAAAGCTAATTT
TTGCTTATTTTTTAGATTTTAAAATTTGCCTTTTTTCAGTCAGTNTTATA
TTGATTTATAATTAGTAGAAACCTAGTTGCACACCTTTGCATTTAACTCT
AGACAAAATATATTGACAGAACTCATATATTTTAGATGTTTAAATATTTA
CAATTAATGAAAAATAGCCACAGCACAACTTAGCCTGTTTTTTAAGTAAC
CAAAATATTATATTTGAGATCAGAATATTAACATTTTGAATAACATTTGA
CATTACTAGAATTTTTGACCTTCAAAATCTAAAAATATATACATCATTTT
ATGATTTTATACTTAAAAGTATTTTAACTAAGAACTTAATAGTCCCATAT
GCCATTAATCAATGTTTTTGAATGTATGAATTTACTATGTCTTCTTTTTA
GCAAAATATTTCTAATTTATGATTACCTAATTAGGCTTTGCATTTGTTGG
ATTTGAGACATTTGATGTAGTTGCAGCTGTAACAAAAGATCGATATCATC
AGATAAATGGAAAAACGGTGTGATATAAAATATTTTAATGTTGTTTTACC
AATTATTTTTTCAATTCTTCGTAATTTATAATCAATATTTTTAAAAAGTT
TCAGGTATTTTCACTATTTTGACTGACACTGTAACTAATTTTAGTTCAGC
TCTTTTCAGAAATTTTACCACTATTTTTCTGTTTGTTTCTAGCCTTAGAC
TTTAATATTGTTTGAATGTTATTTTGCAATCATTTGTTCAGTATTTTTGT
TTTTCTGAAAAGCTAATTTTTGCTTATTTTCTAGATTTTAAAATTTGCCT
TTTTTCAGTCAGTCATTATTCAGTATTACTGTTCTAAACTGAATTTTGAG
ATTGGTTTATTTTGTTGTAGGTCGAAGTAAAAGGCTCAGATGAGCAGCAA
GCACATTTGAACAAAAAGAAGGCTGAAGGTATGAGTGAGTACCAGAACTT
TCTTATTATTTTAATGATTACCTTTCGAATGCTCAAATACTGATTCTCGT
CTACGGGAAGGGTTTTTTTCAAATGACCTTCTTGATTTATTTGCGAATTA
AATACCTTAAGGAAAGAAATTTTTGTGGAACAAGTTTTTGACAAATCCGC
GAAATAAGAATATTATCATGATTTAGACAGGTTTAGAAAATAACCTATAG
TATTAGTGTTTTTGGGGCAGAATAAGCCATATTTAAACAAAAATTTGTCT
CAACCGCAAAATTAAATTCTGTGAAACTTCTGAATTTTGAGCTGTGAACT
GCGAAATTAAATTCCACAAAAATTTTTTTCCGCAGAGATTTCTTCCCTTA
AGGTAACAACAAACAAGGAATTGAAATGAATTTATCTTAAATATTTTGCT
TTTTTTTCAGCTATCCGGTATGCTTCTGCTGGAAGAGGTAGAGGAATTGG
ATCAGGAAATATTGGAACAGTGACAGGATACGGTGCATATGCAAACCTTG
GTCAACCATTAATCGTAAACCCTGCTCAACATAGTGTACAATATACAGGT
AAGAAGTTAGTTAGCAAAACATATTTGCTATAAGCCTTAAATATCAACAC
TGATCACACCTTGGTAAAAGGATTAATGAATTATAGACAAAAGTATGTTA
ATTAGGGTTTAAACTGGTGTAAATAATGTTTTTTTTTTTTTTCAACCTGA
TAAAAAAAGAAATAAAATAATTGATTCGACAAATCCTTTTGAACCTTCAG
TTGCTTTTTCATTACTATTTTGTTTTTTTCTCAGTTCCTGCTGCAGCAAC
TGGTGGATATGTGTATGATCCCGCATCTAATACGTATTATCAACTCCCTG
GAACTGTCGTCGCTGGTAAGACTATCACTCAAATTTACCAGATGAATGCA
CGTCAAAATATTTCAAAACCTTATTTTATAAAAAATTACTCAATAGTAGG
TTTTAAAATAGATCACTCTTTGGTATCTGGTCAAAAATATAAGCTCGATA
AAATCGCGAAATTTAATCCCCGTTAAAGTTTATCCCATTAAAGTAGTAAC
AAAATATTTCTGTAATTAACAGGTGGTGCAGTTGCAGGTGCAGTGCAAAC
GGTAGGAACCTCAGTCGCAGCTGCCTCCCCATACGCTGGTGCAACCATCG
CAGCAGGTCAACAAGTCTTAACTTCTCCACAAGTTGGTCAGCGAACGTTA
CAAGCAACTGATATGATCCAAGGACTAGCAGCAGGCTCAACAGTTGGTAA
GTGAGTAATCTACGTAAGTCATCTCTTGAGAATAACTTTTAAAAGTTTGA
GTGTCCAAAAGTTCTAAGTAAACATCATAGATCAATAACAGTACTTTGTA
TGTATATGATATTATCAATCATATTATCATATTTTTAGCCTTGGGCGCAG
CGTATCCAAGCGAAACATCAACCTTTGGGCCAACTCGACATAACGTGATC
GGAGCCAGTGCGCAACAACCGATGGCAGGAAACACAGTCGCCGATCCTCA
CGTCGTCTATTCTACAGCAACATCTATTTCTGCTGGCGATGCTGCTTTGT
CAGCGGCTCGTGGTTACCACCCTTATGGAAGATAAGATATTGAACTTCAA
AACTGAAAAAAGAGACTTCAATCGTACTTTGATCTGTACGTAAAGAAGAA
AGCTTTGAAAGACTCGATCTTCACTCATGGACAGCGATTTTGTAAATAAA
AACTTTTTTAATCTATTGATTGATTGATGCTTTGTCAGTTGGTTCTTCGA
TACGTGATAATCATATTGCTCTTTGGTGACAATTCGGTTTTATAAATGAA
AAGACATTTTATTGGATTTGTCTACGCCATGCACAATGGATGTAGATATT
TTACGCGATAATTTCATTTGAATGAACAATTTTTAACGTGAGAACTTTAT
GGACATGCGCGATATTTCTCTCTTTTTATTTGAAAGAAAATTTATTCAAT
GGAATTACAAAATATTTTGATTGTTTATCCATTTCTTATTTTTTTATCGG
AATTTTCTTTACTTACTATTGAGTCCACTTCCACATCAGCTTAGTTTGAG
ATGTGTAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035868XLOC_035868Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056952-exon-scaffold_284-1575043694:888436..888854TCONS_00056952-exon-scaffold_284-1575043694:888436..888854Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:887415..887537TCONS_00056952-exon-scaffold_284-1575043694:887415..887537Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:885777..885870TCONS_00056952-exon-scaffold_284-1575043694:885777..885870Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:884862..884897TCONS_00056952-exon-scaffold_284-1575043694:884862..884897Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:884556..884615TCONS_00056952-exon-scaffold_284-1575043694:884556..884615Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:884277..884390TCONS_00056952-exon-scaffold_284-1575043694:884277..884390Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:884126..884174TCONS_00056952-exon-scaffold_284-1575043694:884126..884174Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:882338..882420TCONS_00056952-exon-scaffold_284-1575043694:882338..882420Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:881921..881984TCONS_00056952-exon-scaffold_284-1575043694:881921..881984Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:881357..881494TCONS_00056952-exon-scaffold_284-1575043694:881357..881494Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:881040..881120TCONS_00056952-exon-scaffold_284-1575043694:881040..881120Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:880659..880832TCONS_00056952-exon-scaffold_284-1575043694:880659..880832Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1575043694:879845..880516TCONS_00056952-exon-scaffold_284-1575043694:879845..880516Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:888436..888854TCONS_00056952-exon-scaffold_284-1510915933:888436..888854Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:887415..887537TCONS_00056952-exon-scaffold_284-1510915933:887415..887537Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:885777..885870TCONS_00056952-exon-scaffold_284-1510915933:885777..885870Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:884862..884897TCONS_00056952-exon-scaffold_284-1510915933:884862..884897Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:884556..884615TCONS_00056952-exon-scaffold_284-1510915933:884556..884615Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:884277..884390TCONS_00056952-exon-scaffold_284-1510915933:884277..884390Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:884126..884174TCONS_00056952-exon-scaffold_284-1510915933:884126..884174Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:882338..882420TCONS_00056952-exon-scaffold_284-1510915933:882338..882420Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:881921..881984TCONS_00056952-exon-scaffold_284-1510915933:881921..881984Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:881357..881494TCONS_00056952-exon-scaffold_284-1510915933:881357..881494Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:881040..881120TCONS_00056952-exon-scaffold_284-1510915933:881040..881120Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:880659..880832TCONS_00056952-exon-scaffold_284-1510915933:880659..880832Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1510915933:879845..880516TCONS_00056952-exon-scaffold_284-1510915933:879845..880516Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:888436..888854TCONS_00056952-exon-scaffold_284-1491911889:888436..888854Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:887415..887537TCONS_00056952-exon-scaffold_284-1491911889:887415..887537Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:885777..885870TCONS_00056952-exon-scaffold_284-1491911889:885777..885870Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:884862..884897TCONS_00056952-exon-scaffold_284-1491911889:884862..884897Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:884556..884615TCONS_00056952-exon-scaffold_284-1491911889:884556..884615Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:884277..884390TCONS_00056952-exon-scaffold_284-1491911889:884277..884390Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:884126..884174TCONS_00056952-exon-scaffold_284-1491911889:884126..884174Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:882338..882420TCONS_00056952-exon-scaffold_284-1491911889:882338..882420Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:881921..881984TCONS_00056952-exon-scaffold_284-1491911889:881921..881984Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:881357..881494TCONS_00056952-exon-scaffold_284-1491911889:881357..881494Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:881040..881120TCONS_00056952-exon-scaffold_284-1491911889:881040..881120Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:880659..880832TCONS_00056952-exon-scaffold_284-1491911889:880659..880832Clytia hemisphaericaexon
TCONS_00056952-exon-scaffold_284-1491911889:879845..880516TCONS_00056952-exon-scaffold_284-1491911889:879845..880516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:879845..888854 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	6.03284e-08	0	0	3.66818e-06	2.88032e-10	4.75741e-06	2.60032e-06	0	0.673915	0	0	0	0	0	0	0	0	0	0	0.0305489	0	0	0	0	2.4142e-07	0	1.95287e-06	0	8.56364e-08
Blast
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BLAST of TCONS_00056952 vs. Swiss-Prot (Human)
Match: MSI1H (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.609e-32
Identity = 74/220 (33.64%), Postives = 108/220 (49.09%), Query Frame = 1 
Query:  385 KPYIRNPNEEH--CKIFVGGVGKLTNDESLRAYFGKFGEIADSVIMKDKHTNEPRGFAFVTFKTPEAVSAVIEQNNKGGHTLDGKMFIEVRKFQRKSEYDPDKXXXXXXXXXXXXXXXFQYKGPMKCSPEMKVFVGGIGIGTTEDDVKKYFEQFGKVLAVDMPVHHVYKCPKGFAFVGFETFDVVAAVTKDRYHQINGKTVEVKGSDEQQAHLNKKKAEG 1038
            +P + +P+  H  CK+F+GG+   T  E LR YFG+FGE+ + ++M+D  T   RGF FVTF     V  V+ Q+    H LD K       F R+++                         P   +   K+FVGG+ + TT +DVK+YFEQFGKV    +         +GF FV FE+ D+V  V +  +H+IN K VE K +  ++       A G
Sbjct:    7 QPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR---HELDSKTIDPKVAFPRRAQ-------------------------PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARG 198
The following BLAST results are available for this feature:
BLAST of TCONS_00056952 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSI1H9.609e-3233.64RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
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