|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057111 ID=TCONS_00057111|Name=TCONS_00057111|organism=Clytia hemisphaerica|type=transcript|length=905bp
ttagacgattaaaaatatgaaatactaAAACAATTTTAACTTActtaaaa
gaatgaaaatatgatggccaatgaaaatgaagaatgtTGGAAACAATGAA
AACATAATGGTCGCAAACAGAGAAGAGACAATAAACAAAGAAGAAGTGAA
ATCTCCTCCTCaatcctcctcctcctcctcctcctccgaagtgtcaaaaa
aagataaaagccAAAAACACCAAGAAGCCACTGTAATGCAATCTCTTTCT
CAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGAAATGCAAGC
ATGTCAACAAAAAACTGTAGTAGAACCTCCTCAATCTTTCGAAGAAGAAG
TTGAAATACACGATGAAAGCCAAAAATACCAAGAAGTCACTGAAGTGAAA
CCTCCTCCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGA
AATCCATCAACACCAGCAAGTCACTGTAGTAGAACCTCCTCAATCTTCCG
AAGCAGAAGAAGTGGTTTCAAAACACGATGAAGGAGGTCAAGAAAACCAA
GGAAACATTCAATCCGAAGCCCAAGGTTCAGATACTGATAATGGTATGCT
ATACTTTTTTATCTTAAGGAGGgactgttttatttttcatttgaaatttt
cGCTCCATTATGTTCAAGATCTCATCAAAAAACGGATCCCTGGTATTGTA
CTTTTCTTTGGGATTGGAATTATTATAAGTTTTTTCTTAGAgcaatttat
aagaacagaaggctAAAATATGGGCGAAAAAGATACCCTGTCCCTTCCAA
GCTTCACATCCCCGTACTTATCTCTTTTTGCCTACAAAGTACTCTTAGTT
aacgtattacttcgaataaacgcccggggcgtttattaaatcttttcgat
tttag Run BLAST on NCBI transcript from alignment at scaffold_285:297349..298253- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057111 ID=TCONS_00057111|Name=TCONS_00057111|organism=Clytia hemisphaerica|type=transcript|length=905bp|location=Sequence derived from alignment at scaffold_285:297349..298253- (Clytia hemisphaerica)
TTAGACGATTAAAAATATGAAATACTAAAACAATTTTAACTTACTTAAAA
GAATGAAAATATGATGGCCAATGAAAATGAAGAATGTTGGAAACAATGAA
AACATAATGGTCGCAAACAGAGAAGAGACAATAAACAAAGAAGAAGTGAA
ATCTCCTCCTCAATCCTCCTCCTCCTCCTCCTCCTCCGAAGTGTCAAAAA
AAGATAAAAGCCAAAAACACCAAGAAGCCACTGTAATGCAATCTCTTTCT
CAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGAAATGCAAGC
ATGTCAACAAAAAACTGTAGTAGAACCTCCTCAATCTTTCGAAGAAGAAG
TTGAAATACACGATGAAAGCCAAAAATACCAAGAAGTCACTGAAGTGAAA
CCTCCTCCTCAAGGCGTCAATACTGATAGTGAATTGGCAATACACGACGA
AATCCATCAACACCAGCAAGTCACTGTAGTAGAACCTCCTCAATCTTCCG
AAGCAGAAGAAGTGGTTTCAAAACACGATGAAGGAGGTCAAGAAAACCAA
GGAAACATTCAATCCGAAGCCCAAGGTTCAGATACTGATAATGGTATGCT
ATACTTTTTTATCTTAAGGAGGGACTGTTTTATTTTTCATTTGAAATTTT
CGCTCCATTATGTTCAAGATCTCATCAAAAAACGGATCCCTGGTATTGTA
CTTTTCTTTGGGATTGGAATTATTATAAGTTTTTTCTTAGAGCAATTTAT
AAGAACAGAAGGCTAAAATATGGGCGAAAAAGATACCCTGTCCCTTCCAA
GCTTCACATCCCCGTACTTATCTCTTTTTGCCTACAAAGTACTCTTAGTT
AACGTATTACTTCGAATAAACGCCCGGGGCGTTTATTAAATCTTTTCGAT
TTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057111-exon-scaffold_285-1575043694:297349..298253 | TCONS_00057111-exon-scaffold_285-1575043694:297349..298253 | Clytia hemisphaerica | exon |
| TCONS_00057111-exon-scaffold_285-1510915933:297349..298253 | TCONS_00057111-exon-scaffold_285-1510915933:297349..298253 | Clytia hemisphaerica | exon |
| TCONS_00057111-exon-scaffold_285-1491911889:297349..298253 | TCONS_00057111-exon-scaffold_285-1491911889:297349..298253 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_285 | supercontig | scaffold_285:297349..298253 - |
Blast
The following BLAST results are available for this feature:
|
