TCONS_00057342 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057342
Unique NameTCONS_00057342
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1824

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057342 ID=TCONS_00057342|Name=TCONS_00057342|organism=Clytia hemisphaerica|type=transcript|length=1824bp
ATTTTGACAAGTAATTTTGACTAAATCGCAAAATGATGATTCTTTTTTCT
ACGATCTTTAACTGAactttcatttatattttttagcaaaaataacCAAA
GTCAATAAAATAGAGAAGAAAGAAGCTTATACTTGTAGCATTTGAAAGAT
AGATGAAAGAATGTACCAAAAATCAGTGCGAATTTGCAGACTGAATAGTG
TGAATGGTTAAACAATCTAAAAAGATCGAGACGTTTGCAGAATATGAAAG
ACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTTGAAAGTT
GAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAAAGtgtaa
aacattcgaaagtgaaACCAAGAACTCAATGGAAAGATTCTCCTGCTTGA
AACACCTGGTCAAGagAGCATGGCGTGGAGATCACGAAGCTTCCAAACAC
GTAGCTAACATCGTTGGGGTGGCACCACCATTGTTCATTTATCGACATGA
CGATGAAGAAGTTGTCGCTTTCCCTAAGTCAAGGGCCATCAATAATTGGG
CATCATTATCGGCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGGAT
GTCATGTTTCTAAAGAAACGACAATTTCTGATCGAAAGGGAACATTTTCT
CGACTCGCAACTTGATGGTTATATTAATGAAATACCGCGTGATCATCCCG
TTGATAAAGGACTGGACCTCATTTATGCTGTCAATAAGAGCAAACCTTTA
GTAGAAGTGTTACAGCACACCTCTCGTCCCACCTCACCATGGAAGAGTCG
TCCATCTTTCAAGAAGATGAATGATCAGAAGTCACACGCACGTATGATGG
TTTCACCTGTTCAAAGCATGATGACTTACGGGGAGAGTGGAGATGCAGAA
CTACAAATCGATTCCAATAACAACATATTGCCCATCGATTCCTTCAATAT
ACAAAACGAAAATCCAAATGAGGTGTCACCACCTACTACTTGTAACCCAA
CATCACAAGCGAAACTTCCATCTTCTAGAACAAGACCATCGTCTGCTTAT
CGTCCCGCAACTGCAGGCCCTTCAATAAATACAAGAGAAAAATCGAACCC
TACCGTAAAAACTGAACGATCAAGGCCTGGTAGTGCTTCAACGTCGCGTA
CATCACAAAAGAGGAGCACAAAAAGTGCAATGGGAAGCTTAAAACGTGAC
CTCGGGAATGTCAAAGCAGCCTCGCAAAAAGTTGGCAATCATACGAAGCA
ACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTACGGCGTCGT
TACATGACGTCATTGAACCTTGTACATCGGTGTCGATCGAACGTCAACGG
CAACTAGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCaacttttaca
aaagaaattatcCATAAACCCCTTGAGCTTTGTCTGAATATCAGCGTAGT
CAAGATGAAAAACTGATTTATCTAGAGTGAAGATTATGATGATGTCAATA
GTTTGCGTTAAGTTTGACTTTTAAAAACTGTCagtttttactcatttttg
ctagACTGATTTTAACCCGACTTTAGACATTGTATTTTATTCATTACATC
TAAACTCAAATAAGGACAATTTTCAGAATAGTCTGCATAAGTTCTCAAGT
ATAAAATCGAAATCTGGATACAAATAAATCTGTAAATATTATTTGagtta
ccttaaaggaagaaattttggcggaaagaaaatttggcggatttggcgga
tttgactgaaatccgccaaattaagttcccgccaaaatttCTTTTTTCCG
CCATCCGCCAAATTAAATTCCCGC
Run BLAST on NCBI

protein sequence of TCONS_00057342-protein

>TCONS_00057342-protein ID=TCONS_00057342-protein|Name=TCONS_00057342-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
MKDFDKPKPSDKDIQNLKVENQTLCDQISILKLKCKTFESETKNSMERFS
CLKHLVKRAWRGDHEASKHVANIVGVAPPLFIYRHDDEEVVAFPKSRAIN
NWASLSASLLERYYKQREDVMFLKKRQFLIEREHFLDSQLDGYINEIPRD
HPVDKGLDLIYAVNKSKPLVEVLQHTSRPTSPWKSRPSFKKMNDQKSHAR
MMVSPVQSMMTYGESGDAELQIDSNNNILPIDSFNIQNENPNEVSPPTTC
NPTSQAKLPSSRTRPSSAYRPATAGPSINTREKSNPTVKTERSRPGSAST
SRTSQKRSTKSAMGSLKRDLGNVKAASQKVGNHTKQRPFSAQCVGVKYFT
ASLHDVIEPCTSVSIERQRQLDVVEKRLQKTTQLLQKKLSINPLSFV
Run BLAST on NCBI

transcript from alignment at scaffold_288:723798..729172+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057342 ID=TCONS_00057342|Name=TCONS_00057342|organism=Clytia hemisphaerica|type=transcript|length=5375bp|location=Sequence derived from alignment at scaffold_288:723798..729172+ (Clytia hemisphaerica)
ATTTTGACAAGTAATTTTGACTAAATCGCAAAATGATGATTCTTTTTTCT
ACGATCTTTAACTGAactttcatttatattttttagcaaaaataacCAAA
GTCAATAAAATAGAGAAGAAAGAAGCTTATACTTGTAGCATTTGAAAGAT
AGATGAAAGAATGTACCAAAAATCAGTGCGAATTTGCAGACTGAATAGTG
TGAATGGTTAAACAATCTAAAAAGATCGAGACGTTTGCAGAATATGAAAG
ACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTTGAAAGTT
GAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAAAGtgtaa
aacattcgaaagtgaaACCAAGAACTCAATGGAAAGATTCTCCTGCTTGA
AACACCTGGTCAAGaggtaaaaagtttttttgtttgtcatgcaacaaata
aaaaactgaaaatattactCCGTGACCATGATTTTTGGTGAAATCTTCTA
ATATACAATGAATTAACCCAAGAAAAAGGTAACGAAAAACGAAAgcaatg
ttttaaaaataactctcCAGCATGGATCGGCTTTTCATTTTAGGTCGTTA
AACTTTAGTATTCAAAATCCTTTAATCAAATTTTGTATGGACTCTATAGT
AAATATCGTCTTCTTAAATTCTTATTTTGTTGCATGACATCCACAGAGCA
TGGCGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACATCGTTGGTAA
gatattttctttataatttttgaaaaaaataaaatgtttgtcCGTGGATT
TTATTAGTAAATTGGCAGGAATGTTGGGCCATCTGTCAGAGCTGATCATg
atattatttgaaaaattttttcttctggGCCAgattattctcaaaaaaat
aagaaaagacgaaaaacaaaattttgttcattcttGACGTTTCGATGCTT
CTTGTATCATGATCACAAGCAAATAGTTAGCTTACAAGCAAAAACGtgtt
gaaaaaacaaaatttcaaattcatgatattattCTCATATTTTTCAAGTA
TTGACTATGCACATTATTATGGTTATTGGAACTgttcaaaaatgatttct
tcTCTTTTCAGGGGTGGCACCACCATTGTTCATTTATCGACATGACGATG
AAGAAGTTGTCGCTTTCCCTAAGGTATTTTCATGGTATATATACTTAGGT
GGTGCAGTACGTCTATTTTTCTATCTTTAGAAATTCGACGTTAAAGGTTT
CACTATCTGATAATTTAGCACAGATAATGCCTTGATGTAACTTTTTGGAC
TAAGTATGTTTCAAGCTAAAATCGGGCTAAAACCTACTGTTCTACAGAAT
CTTGTGGATTTGAGGCAATTTGAGGTATCATGTTGAATTATGGTGTATGG
TCTTAAAATTCAATTGCTTGAACTGAATTAAGCCTGGTCATAAATTGAAA
AGGTGGCATTTTTCGctttaaaatcaaacttttttcgaatttttgtatCA
TTTTCCTTTTCCATCAGTCAAGGGCCATCAATAATTGGGCATCATTATCG
GCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGGATGTCATGTTTCT
AAAGAAACGACAATTTCTGATCGAAAGGGAACATTTTCTCGACTCGCAAC
TTGATGGTTATATTAATGAAATACCGCGTGATCATCCCGTTGATAAAGGA
CTGGACCTCATTTATGCTGTCAATAAGGTATTTTCTTATACAGCTGCTAT
GAGATTTGGTTTGAACAGTTTATTTCTTCACATAATATTCATGCatacct
tatcagggaaaaaaatgtcggagttttatttagtcggggttttttttcgc
cggggaaaaatttcgtcacctagaggtattttcgtcactttcccccgacc
aaagtttcaaattcgtcacttttccccgacgaaatttacaatttagtcac
tttcaccgagctaaattgtccaaatgaaatggtttccttcactagctcga
aaaaagatcttgtaattcgacgtttaaagcactaatttcggttaataaag
gtgtaaaaaaattagattttaattttggttgggttttgaaaattgggtaa
aagttttggtcggggataaaaaaatcggttaaaagttttggtcgggtgat
aaaatatcggggaaaaaattcgtcgggggaaaatttcgtcaccccctcaa
aattttcgtcactttcccccgacattttttcccccgataaggtattatgA
GATGGAAAAAGGAATATTTTACACCCAAATTCCTATCGATCAAtactttt
caatcaatttatcATAATTTCGTTATAATATTAATCTTAGCTCGCGACCC
CCATCTATGTAAAAGAGGTagcaatgtttgaaaattgcaaAAGAAGGCAC
CGACAGGAATACTTGTCTGCAAAGTTCTTAGCATCCGTCTCCCTAAATCC
taagatatttttataaatcGATAAGCCAAATTGATTCATATCATGCATCT
CGTTCAAGTTCATGCTATCATTTGGGTCAATTTAAATAATGAGAAATTCC
TGATATTACGACCCTATAACAGTTTGAAAAGTGAGGGGTTCTCGTTGTAC
GCTGATTTTCAGGGGAATAACATCAAATCTTGAAAAAGGAGAGGGATCTC
CTCACTACCCCCTTTTCTAAATGAATTCCCCCTGCCATATGATCCACCCA
AGCTATGGTGACTCCCTTCTGAGATGTACAGTGAGCAAGTTAGCATGTTT
ACCAATAAAATCTTTAGTGTTTAATTTCGAACTACCTGGTGCATTTCAGA
GCAAACCTTTAGTAGAAGTGTTACAGCACACCTCTCGTCCCACCTCACCA
TGGAAGAGTCGTCCATCTTTCAAGAAGATGAATGATCAGAAGTCACACGC
ACGTATGATGGTTTCACCTGTTCAAAGCATGATGACTTACGGTATTAAAG
CCATGTGCATGCACTGCATATTTTCCTACACTAAGGTTTATTTAGAtgag
ttgtttttgttttcttattcatcaatttttaaatttaaaagagtGGGCTA
TTGTCAAATCAATCTCAATTAAATTTCAATTATCATATCAGGTTTTAACA
TCATACTCGGGTTATCCCTAATTTCAGATAAATtggttaaaagaaaaaat
tccaaGATTTCGAGACAAGAAGATAAACCATCTaacgcaaaaattaaaaa
aataaggtCTTCAAAGGTTCAAATACTCTTCTTtgcaaaagttttaattt
tcttcttcatcaaattttttcattacgatttttaaatttttcagattaaG
AAATAGTTGGCCTActacagaaaatgtataacatattATCCGTTTGATAT
TTCTCTACAGGGGAGAGTGGAGATGCAGAACTACAAATCGATTCCAATAA
CAACATATTGCCCATCGATTCCTTCAATATACAAAACGAAAATCCAAATG
AGGTAGCTCTTAAGCTTAGTAACCCACGGTTCTAAACTCTTTGGATTGTT
ATTTAAATTACTTCTTTGTAGAAAATAGATGGATCGATTTCATACTCAAA
TTATAAACCAATAGAAAACTGTATTAACACAAGtttaacctttttatttg
aaGGTGTCACCACCTACTACTTGTAACCCAACATCACAAGCGAAACTTCC
ATCTTCTAGAACAAGACCATCGTCTGCTTATCGTCCCGCAACTGCAGGCC
CTTCAATAAATACAAGAGAAAAATCGAACCCTACCGTAAAAACTGAACGA
TCAAGGCCTGGTAGTGCTTCAACGTCGGTAAGTACAACCTTGCACTTGTA
ATATACAAAAACCCTTGACTGTATTCTTGTTTATACTTTggtctttattt
tgaaaactctTATTGATAACATTCATTTCTTTGCCCTaacttttataaaa
ttttgattttaattgtcATTTTCATCTCCTCCACAGCGTACATCACAAAA
GAGGAGCACAAAAAGTGCAATGGGAAGCTTAAAACGTGACCTCGGGAATG
TCAAAGCAGGTGAGTCACCCCTCATCCCGACACACTACATCACATAAATC
GTAGTTATTTTTAGGTCTGGACACTTCCCCTCCATGTTTGTGAAAAATGT
ATGAGTACATGTACgttcttaggtgccaaataatcacttgttaatttttc
gaaaattttccaaccccccggacattATTAAGACTCCCCCcctcgtttat
taatttttaagaatattttcagttagcAAGAAGAAGTCGCCTTATTTTTC
TCcaaaaacctgatttttaaAGTACAATCTCCAACCCCCCATGCAATTAA
GTAGGTCCCCACTGtttatcaaaatttcgaaaattttccaaccccgtTTA
ATCAAACTCCCCCCCccatttatttggcacctaagagtacttgCTTTTTG
CTGCTTTTAACGGAAAAATTAGGAATTCATTTAATCTCATAATGTTCTGA
GATCATCCATTCTTCTCCCACAACACTATGCTCTAAAGGGGTATGGTGAA
TGTAATGAATTGAATTTGTTCAACAAACATCCTTAAAGCGAAAGCGACTG
TGCTCTAATATTTAGAATGTACAGATTAACCGGAGTAACCAGGATCTGCT
CGAAGATTAGAATTTAGTCTGTGGAGTTCTTTTAGTTTTCCAGTTCTCCT
TTCTACTCCCCTTTTTTTCTGAAGGTGATTTGTCAATCGTCAATCTTTAT
CCCTtgccattctattttattcaaTTAATGATTCCACCACAATAAGTATT
CTCTGTTTTACTCATGACAGCCTCGCAAAAAGTTGGCAATCATACGAAGC
AACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTACGGCGTCG
TTACATGACGTCATTGAACCTTGTACATCGGTGTCGATCGAACGTCAACG
GCAACTAGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCaacttttac
aaaagaaattatcCATAAACCCCTTGAGCTTTGTCTGAATATCAGCGTAG
TCAAGATGAAAAACTGATTTATCTAGAGTGAAGATTATGATGATGTCAAT
AGTTTGCGTTAAGTTTGACTTTTAAAAACTGTCagtttttactcattttt
gctagACTGATTTTAACCCGACTTTAGACATTGTATTTTATTCATTACAT
CTAAACTCAAATAAGGACAATTTTCAGAATAGTCTGCATAAGTTCTCAAG
TATAAAATCGAAATCTGGATACAAATAAATCTGTAAATATTATTTGagtt
accttaaaggaagaaattttggcggaaagaaaatttggcggatttggcgg
atttgactgaaatccgccaaattaagttcccgccaaaatttCTTTTTTCC
GCCATCCGCCAAATTAAATTCCCGC

Coding sequence (CDS) from alignment at scaffold_288:723798..729172+

>TCONS_00057342 ID=TCONS_00057342|Name=TCONS_00057342|organism=Clytia hemisphaerica|type=CDS|length=10746bp|location=Sequence derived from alignment at scaffold_288:723798..729172+ (Clytia hemisphaerica)
ATGAAAGACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTT
GAAAGTTGAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAA
AGtgtaaaacattcgaaagtgaaACCAAGAACTCAATGGAAAGATTCTCC
TGCTTGAAACACCTGGTCAAGagAGCATGGCGTGGAGATCACGAAGCTTC
CAAACACGTAGCTAACATCGTTGGGGTGGCACCACCATTGTTCATTTATC
GACATGACGATGAAGAAGTTGTCGCTTTCCCTAAGTCAAGGGCCATCAAT
AATTGGGCATCATTATCGGCAAGTCTTTTGGAACGTTACTACAAACAGCG
AGAGGATGTCATGTTTCTAAAGAAACGACAATTTCTGATCGAAAGGGAAC
ATTTTCTCGACTCGCAACTTGATGGTTATATTAATGAAATACCGCGTGAT
CATCCCGTTGATAAAGGACTGGACCTCATTTATGCTGTCAATAAGAGCAA
ACCTTTAGTAGAAGTGTTACAGCACACCTCTCGTCCCACCTCACCATGGA
AGAGTCGTCCATCTTTCAAGAAGATGAATGATCAGAAGTCACACGCACGT
ATGATGGTTTCACCTGTTCAAAGCATGATGACTTACGGGGAGAGTGGAGA
TGCAGAACTACAAATCGATTCCAATAACAACATATTGCCCATCGATTCCT
TCAATATACAAAACGAAAATCCAAATGAGGTGTCACCACCTACTACTTGT
AACCCAACATCACAAGCGAAACTTCCATCTTCTAGAACAAGACCATCGTC
TGCTTATCGTCCCGCAACTGCAGGCCCTTCAATAAATACAAGAGAAAAAT
CGAACCCTACCGTAAAAACTGAACGATCAAGGCCTGGTAGTGCTTCAACG
TCGCGTACATCACAAAAGAGGAGCACAAAAAGTGCAATGGGAAGCTTAAA
ACGTGACCTCGGGAATGTCAAAGCAGCCTCGCAAAAAGTTGGCAATCATA
CGAAGCAACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTACG
GCGTCGTTACATGACGTCATTGAACCTTGTACATCGGTGTCGATCGAACG
TCAACGGCAACTAGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCaac
ttttacaaaagaaattatcCATAAACCCCTTGAGCTTTGTCTGAATGAAA
GACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTTGAAAGT
TGAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAAAGtgta
aaacattcgaaagtgaaACCAAGAACTCAATGGAAAGATTCTCCTGCTTG
AAACACCTGGTCAAGagAGCATGGCGTGGAGATCACGAAGCTTCCAAACA
CGTAGCTAACATCGTTGGGGTGGCACCACCATTGTTCATTTATCGACATG
ACGATGAAGAAGTTGTCGCTTTCCCTAAGTCAAGGGCCATCAATAATTGG
GCATCATTATCGGCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGGA
TGTCATGTTTCTAAAGAAACGACAATTTCTGATCGAAAGGGAACATTTTC
TCGACTCGCAACTTGATGGTTATATTAATGAAATACCGCGTGATCATCCC
GTTGATAAAGGACTGGACCTCATTTATGCTGTCAATAAGAGCAAACCTTT
AGTAGAAGTGTTACAGCACACCTCTCGTCCCACCTCACCATGGAAGAGTC
GTCCATCTTTCAAGAAGATGAATGATCAGAAGTCACACGCACGTATGATG
GTTTCACCTGTTCAAAGCATGATGACTTACGGGGAGAGTGGAGATGCAGA
ACTACAAATCGATTCCAATAACAACATATTGCCCATCGATTCCTTCAATA
TACAAAACGAAAATCCAAATGAGGTGTCACCACCTACTACTTGTAACCCA
ACATCACAAGCGAAACTTCCATCTTCTAGAACAAGACCATCGTCTGCTTA
TCGTCCCGCAACTGCAGGCCCTTCAATAAATACAAGAGAAAAATCGAACC
CTACCGTAAAAACTGAACGATCAAGGCCTGGTAGTGCTTCAACGTCGCGT
ACATCACAAAAGAGGAGCACAAAAAGTGCAATGGGAAGCTTAAAACGTGA
CCTCGGGAATGTCAAAGCAGCCTCGCAAAAAGTTGGCAATCATACGAAGC
AACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTACGGCGTCG
TTACATGACGTCATTGAACCTTGTACATCGGTGTCGATCGAACGTCAACG
GCAACTAGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCaacttttac
aaaagaaattatcCATAAACCCCTTGAGCTTTGTCTGAATGAAAGACTTT
GATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTTGAAAGTTGAGAA
TCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAAAGtgtaaaacat
tcgaaagtgaaACCAAGAACTCAATGGAAAGATTCTCCTGCTTGAAACAC
CTGGTCAAGagAGCATGGCGTGGAGATCACGAAGCTTCCAAACACGTAGC
TAACATCGTTGGGGTGGCACCACCATTGTTCATTTATCGACATGACGATG
AAGAAGTTGTCGCTTTCCCTAAGTCAAGGGCCATCAATAATTGGGCATCA
TTATCGGCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGGATGTCAT
GTTTCTAAAGAAACGACAATTTCTGATCGAAAGGGAACATTTTCTCGACT
CGCAACTTGATGGTTATATTAATGAAATACCGCGTGATCATCCCGTTGAT
AAAGGACTGGACCTCATTTATGCTGTCAATAAGAGCAAACCTTTAGTAGA
AGTGTTACAGCACACCTCTCGTCCCACCTCACCATGGAAGAGTCGTCCAT
CTTTCAAGAAGATGAATGATCAGAAGTCACACGCACGTATGATGGTTTCA
CCTGTTCAAAGCATGATGACTTACGGGGAGAGTGGAGATGCAGAACTACA
AATCGATTCCAATAACAACATATTGCCCATCGATTCCTTCAATATACAAA
ACGAAAATCCAAATGAGGTGTCACCACCTACTACTTGTAACCCAACATCA
CAAGCGAAACTTCCATCTTCTAGAACAAGACCATCGTCTGCTTATCGTCC
CGCAACTGCAGGCCCTTCAATAAATACAAGAGAAAAATCGAACCCTACCG
TAAAAACTGAACGATCAAGGCCTGGTAGTGCTTCAACGTCGCGTACATCA
CAAAAGAGGAGCACAAAAAGTGCAATGGGAAGCTTAAAACGTGACCTCGG
GAATGTCAAAGCAGCCTCGCAAAAAGTTGGCAATCATACGAAGCAACGTC
CTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTACGGCGTCGTTACAT
GACGTCATTGAACCTTGTACATCGGTGTCGATCGAACGTCAACGGCAACT
AGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCaacttttacaaaaga
aattatcCATAAACCCCTTGAGCTTTGTCTGAATGAAAGACTTTGATAAG
CCTAAGCCAAGTGATAAAGACATCCAGAATTTGAAAGTTGAGAATCAGAC
GTTATGTGATCAGATCAGTATATTGAAGTTAAAGtgtaaaacattcgaaa
gtgaaACCAAGAACTCAATGGAAAGATTCTCCTGCTTGAAACACCTGGTC
AAGagAGCATGGCGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACAT
CGTTGGGGTGGCACCACCATTGTTCATTTATCGACATGACGATGAAGAAG
TTGTCGCTTTCCCTAAGTCAAGGGCCATCAATAATTGGGCATCATTATCG
GCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGGATGTCATGTTTCT
AAAGAAACGACAATTTCTGATCGAAAGGGAACATTTTCTCGACTCGCAAC
TTGATGGTTATATTAATGAAATACCGCGTGATCATCCCGTTGATAAAGGA
CTGGACCTCATTTATGCTGTCAATAAGAGCAAACCTTTAGTAGAAGTGTT
ACAGCACACCTCTCGTCCCACCTCACCATGGAAGAGTCGTCCATCTTTCA
AGAAGATGAATGATCAGAAGTCACACGCACGTATGATGGTTTCACCTGTT
CAAAGCATGATGACTTACGGGGAGAGTGGAGATGCAGAACTACAAATCGA
TTCCAATAACAACATATTGCCCATCGATTCCTTCAATATACAAAACGAAA
ATCCAAATGAGGTGTCACCACCTACTACTTGTAACCCAACATCACAAGCG
AAACTTCCATCTTCTAGAACAAGACCATCGTCTGCTTATCGTCCCGCAAC
TGCAGGCCCTTCAATAAATACAAGAGAAAAATCGAACCCTACCGTAAAAA
CTGAACGATCAAGGCCTGGTAGTGCTTCAACGTCGCGTACATCACAAAAG
AGGAGCACAAAAAGTGCAATGGGAAGCTTAAAACGTGACCTCGGGAATGT
CAAAGCAGCCTCGCAAAAAGTTGGCAATCATACGAAGCAACGTCCTTTCT
CAGCTCAATGTGTTGGCGTCAAATATTTTACGGCGTCGTTACATGACGTC
ATTGAACCTTGTACATCGGTGTCGATCGAACGTCAACGGCAACTAGATGT
GGTGGAGAAAAGACTTCAAAAAACAACGCaacttttacaaaagaaattat
cCATAAACCCCTTGAGCTTTGTCTGAATGAAAGACTTTGATAAGCCTAAG
CCAAGTGATAAAGACATCCAGAATTTGAAAGTTGAGAATCAGACGTTATG
TGATCAGATCAGTATATTGAAGTTAAAGtgtaaaacattcgaaagtgaaA
CCAAGAACTCAATGGAAAGATTCTCCTGCTTGAAACACCTGGTCAAGagA
GCATGGCGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACATCGTTGG
GGTGGCACCACCATTGTTCATTTATCGACATGACGATGAAGAAGTTGTCG
CTTTCCCTAAGTCAAGGGCCATCAATAATTGGGCATCATTATCGGCAAGT
CTTTTGGAACGTTACTACAAACAGCGAGAGGATGTCATGTTTCTAAAGAA
ACGACAATTTCTGATCGAAAGGGAACATTTTCTCGACTCGCAACTTGATG
GTTATATTAATGAAATACCGCGTGATCATCCCGTTGATAAAGGACTGGAC
CTCATTTATGCTGTCAATAAGAGCAAACCTTTAGTAGAAGTGTTACAGCA
CACCTCTCGTCCCACCTCACCATGGAAGAGTCGTCCATCTTTCAAGAAGA
TGAATGATCAGAAGTCACACGCACGTATGATGGTTTCACCTGTTCAAAGC
ATGATGACTTACGGGGAGAGTGGAGATGCAGAACTACAAATCGATTCCAA
TAACAACATATTGCCCATCGATTCCTTCAATATACAAAACGAAAATCCAA
ATGAGGTGTCACCACCTACTACTTGTAACCCAACATCACAAGCGAAACTT
CCATCTTCTAGAACAAGACCATCGTCTGCTTATCGTCCCGCAACTGCAGG
CCCTTCAATAAATACAAGAGAAAAATCGAACCCTACCGTAAAAACTGAAC
GATCAAGGCCTGGTAGTGCTTCAACGTCGCGTACATCACAAAAGAGGAGC
ACAAAAAGTGCAATGGGAAGCTTAAAACGTGACCTCGGGAATGTCAAAGC
AGCCTCGCAAAAAGTTGGCAATCATACGAAGCAACGTCCTTTCTCAGCTC
AATGTGTTGGCGTCAAATATTTTACGGCGTCGTTACATGACGTCATTGAA
CCTTGTACATCGGTGTCGATCGAACGTCAACGGCAACTAGATGTGGTGGA
GAAAAGACTTCAAAAAACAACGCaacttttacaaaagaaattatcCATAA
ACCCCTTGAGCTTTGTCTGAATGAAAGACTTTGATAAGCCTAAGCCAAGT
GATAAAGACATCCAGAATTTGAAAGTTGAGAATCAGACGTTATGTGATCA
GATCAGTATATTGAAGTTAAAGtgtaaaacattcgaaagtgaaACCAAGA
ACTCAATGGAAAGATTCTCCTGCTTGAAACACCTGGTCAAGagAGCATGG
CGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACATCGTTGGGGTGGC
ACCACCATTGTTCATTTATCGACATGACGATGAAGAAGTTGTCGCTTTCC
CTAAGTCAAGGGCCATCAATAATTGGGCATCATTATCGGCAAGTCTTTTG
GAACGTTACTACAAACAGCGAGAGGATGTCATGTTTCTAAAGAAACGACA
ATTTCTGATCGAAAGGGAACATTTTCTCGACTCGCAACTTGATGGTTATA
TTAATGAAATACCGCGTGATCATCCCGTTGATAAAGGACTGGACCTCATT
TATGCTGTCAATAAGAGCAAACCTTTAGTAGAAGTGTTACAGCACACCTC
TCGTCCCACCTCACCATGGAAGAGTCGTCCATCTTTCAAGAAGATGAATG
ATCAGAAGTCACACGCACGTATGATGGTTTCACCTGTTCAAAGCATGATG
ACTTACGGGGAGAGTGGAGATGCAGAACTACAAATCGATTCCAATAACAA
CATATTGCCCATCGATTCCTTCAATATACAAAACGAAAATCCAAATGAGG
TGTCACCACCTACTACTTGTAACCCAACATCACAAGCGAAACTTCCATCT
TCTAGAACAAGACCATCGTCTGCTTATCGTCCCGCAACTGCAGGCCCTTC
AATAAATACAAGAGAAAAATCGAACCCTACCGTAAAAACTGAACGATCAA
GGCCTGGTAGTGCTTCAACGTCGCGTACATCACAAAAGAGGAGCACAAAA
AGTGCAATGGGAAGCTTAAAACGTGACCTCGGGAATGTCAAAGCAGCCTC
GCAAAAAGTTGGCAATCATACGAAGCAACGTCCTTTCTCAGCTCAATGTG
TTGGCGTCAAATATTTTACGGCGTCGTTACATGACGTCATTGAACCTTGT
ACATCGGTGTCGATCGAACGTCAACGGCAACTAGATGTGGTGGAGAAAAG
ACTTCAAAAAACAACGCaacttttacaaaagaaattatcCATAAACCCCT
TGAGCTTTGTCTGAATGAAAGACTTTGATAAGCCTAAGCCAAGTGATAAA
GACATCCAGAATTTGAAAGTTGAGAATCAGACGTTATGTGATCAGATCAG
TATATTGAAGTTAAAGtgtaaaacattcgaaagtgaaACCAAGAACTCAA
TGGAAAGATTCTCCTGCTTGAAACACCTGGTCAAGagAGCATGGCGTGGA
GATCACGAAGCTTCCAAACACGTAGCTAACATCGTTGGGGTGGCACCACC
ATTGTTCATTTATCGACATGACGATGAAGAAGTTGTCGCTTTCCCTAAGT
CAAGGGCCATCAATAATTGGGCATCATTATCGGCAAGTCTTTTGGAACGT
TACTACAAACAGCGAGAGGATGTCATGTTTCTAAAGAAACGACAATTTCT
GATCGAAAGGGAACATTTTCTCGACTCGCAACTTGATGGTTATATTAATG
AAATACCGCGTGATCATCCCGTTGATAAAGGACTGGACCTCATTTATGCT
GTCAATAAGAGCAAACCTTTAGTAGAAGTGTTACAGCACACCTCTCGTCC
CACCTCACCATGGAAGAGTCGTCCATCTTTCAAGAAGATGAATGATCAGA
AGTCACACGCACGTATGATGGTTTCACCTGTTCAAAGCATGATGACTTAC
GGGGAGAGTGGAGATGCAGAACTACAAATCGATTCCAATAACAACATATT
GCCCATCGATTCCTTCAATATACAAAACGAAAATCCAAATGAGGTGTCAC
CACCTACTACTTGTAACCCAACATCACAAGCGAAACTTCCATCTTCTAGA
ACAAGACCATCGTCTGCTTATCGTCCCGCAACTGCAGGCCCTTCAATAAA
TACAAGAGAAAAATCGAACCCTACCGTAAAAACTGAACGATCAAGGCCTG
GTAGTGCTTCAACGTCGCGTACATCACAAAAGAGGAGCACAAAAAGTGCA
ATGGGAAGCTTAAAACGTGACCTCGGGAATGTCAAAGCAGCCTCGCAAAA
AGTTGGCAATCATACGAAGCAACGTCCTTTCTCAGCTCAATGTGTTGGCG
TCAAATATTTTACGGCGTCGTTACATGACGTCATTGAACCTTGTACATCG
GTGTCGATCGAACGTCAACGGCAACTAGATGTGGTGGAGAAAAGACTTCA
AAAAACAACGCaacttttacaaaagaaattatcCATAAACCCCTTGAGCT
TTGTCTGAATGAAAGACTTTGATAAGCCTAAGCCAAGTGATAAAGACATC
CAGAATTTGAAAGTTGAGAATCAGACGTTATGTGATCAGATCAGTATATT
GAAGTTAAAGtgtaaaacattcgaaagtgaaACCAAGAACTCAATGGAAA
GATTCTCCTGCTTGAAACACCTGGTCAAGagAGCATGGCGTGGAGATCAC
GAAGCTTCCAAACACGTAGCTAACATCGTTGGGGTGGCACCACCATTGTT
CATTTATCGACATGACGATGAAGAAGTTGTCGCTTTCCCTAAGTCAAGGG
CCATCAATAATTGGGCATCATTATCGGCAAGTCTTTTGGAACGTTACTAC
AAACAGCGAGAGGATGTCATGTTTCTAAAGAAACGACAATTTCTGATCGA
AAGGGAACATTTTCTCGACTCGCAACTTGATGGTTATATTAATGAAATAC
CGCGTGATCATCCCGTTGATAAAGGACTGGACCTCATTTATGCTGTCAAT
AAGAGCAAACCTTTAGTAGAAGTGTTACAGCACACCTCTCGTCCCACCTC
ACCATGGAAGAGTCGTCCATCTTTCAAGAAGATGAATGATCAGAAGTCAC
ACGCACGTATGATGGTTTCACCTGTTCAAAGCATGATGACTTACGGGGAG
AGTGGAGATGCAGAACTACAAATCGATTCCAATAACAACATATTGCCCAT
CGATTCCTTCAATATACAAAACGAAAATCCAAATGAGGTGTCACCACCTA
CTACTTGTAACCCAACATCACAAGCGAAACTTCCATCTTCTAGAACAAGA
CCATCGTCTGCTTATCGTCCCGCAACTGCAGGCCCTTCAATAAATACAAG
AGAAAAATCGAACCCTACCGTAAAAACTGAACGATCAAGGCCTGGTAGTG
CTTCAACGTCGCGTACATCACAAAAGAGGAGCACAAAAAGTGCAATGGGA
AGCTTAAAACGTGACCTCGGGAATGTCAAAGCAGCCTCGCAAAAAGTTGG
CAATCATACGAAGCAACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAAT
ATTTTACGGCGTCGTTACATGACGTCATTGAACCTTGTACATCGGTGTCG
ATCGAACGTCAACGGCAACTAGATGTGGTGGAGAAAAGACTTCAAAAAAC
AACGCaacttttacaaaagaaattatcCATAAACCCCTTGAGCTTTGTCT
GAATGAAAGACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAAT
TTGAAAGTTGAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTT
AAAGtgtaaaacattcgaaagtgaaACCAAGAACTCAATGGAAAGATTCT
CCTGCTTGAAACACCTGGTCAAGagAGCATGGCGTGGAGATCACGAAGCT
TCCAAACACGTAGCTAACATCGTTGGGGTGGCACCACCATTGTTCATTTA
TCGACATGACGATGAAGAAGTTGTCGCTTTCCCTAAGTCAAGGGCCATCA
ATAATTGGGCATCATTATCGGCAAGTCTTTTGGAACGTTACTACAAACAG
CGAGAGGATGTCATGTTTCTAAAGAAACGACAATTTCTGATCGAAAGGGA
ACATTTTCTCGACTCGCAACTTGATGGTTATATTAATGAAATACCGCGTG
ATCATCCCGTTGATAAAGGACTGGACCTCATTTATGCTGTCAATAAGAGC
AAACCTTTAGTAGAAGTGTTACAGCACACCTCTCGTCCCACCTCACCATG
GAAGAGTCGTCCATCTTTCAAGAAGATGAATGATCAGAAGTCACACGCAC
GTATGATGGTTTCACCTGTTCAAAGCATGATGACTTACGGGGAGAGTGGA
GATGCAGAACTACAAATCGATTCCAATAACAACATATTGCCCATCGATTC
CTTCAATATACAAAACGAAAATCCAAATGAGGTGTCACCACCTACTACTT
GTAACCCAACATCACAAGCGAAACTTCCATCTTCTAGAACAAGACCATCG
TCTGCTTATCGTCCCGCAACTGCAGGCCCTTCAATAAATACAAGAGAAAA
ATCGAACCCTACCGTAAAAACTGAACGATCAAGGCCTGGTAGTGCTTCAA
CGTCGCGTACATCACAAAAGAGGAGCACAAAAAGTGCAATGGGAAGCTTA
AAACGTGACCTCGGGAATGTCAAAGCAGCCTCGCAAAAAGTTGGCAATCA
TACGAAGCAACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTA
CGGCGTCGTTACATGACGTCATTGAACCTTGTACATCGGTGTCGATCGAA
CGTCAACGGCAACTAGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCa
acttttacaaaagaaattatcCATAAACCCCTTGAGCTTTGTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036134XLOC_036134Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057342-exon-scaffold_288-1491911889:723798..724213TCONS_00057342-exon-scaffold_288-1491911889:723798..724213Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:723798..724213TCONS_00057342-exon-scaffold_288-1510915933:723798..724213Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:723798..724213TCONS_00057342-exon-scaffold_288-1575043694:723798..724213Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:724494..724543TCONS_00057342-exon-scaffold_288-1491911889:724494..724543Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:724494..724543TCONS_00057342-exon-scaffold_288-1510915933:724494..724543Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:724494..724543TCONS_00057342-exon-scaffold_288-1575043694:724494..724543Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:724909..724970TCONS_00057342-exon-scaffold_288-1491911889:724909..724970Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:724909..724970TCONS_00057342-exon-scaffold_288-1510915933:724909..724970Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:724909..724970TCONS_00057342-exon-scaffold_288-1575043694:724909..724970Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:725315..725524TCONS_00057342-exon-scaffold_288-1491911889:725315..725524Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:725315..725524TCONS_00057342-exon-scaffold_288-1510915933:725315..725524Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:725315..725524TCONS_00057342-exon-scaffold_288-1575043694:725315..725524Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:726597..726738TCONS_00057342-exon-scaffold_288-1491911889:726597..726738Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:726597..726738TCONS_00057342-exon-scaffold_288-1510915933:726597..726738Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:726597..726738TCONS_00057342-exon-scaffold_288-1575043694:726597..726738Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:727158..727249TCONS_00057342-exon-scaffold_288-1491911889:727158..727249Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:727158..727249TCONS_00057342-exon-scaffold_288-1510915933:727158..727249Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:727158..727249TCONS_00057342-exon-scaffold_288-1575043694:727158..727249Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:727401..727574TCONS_00057342-exon-scaffold_288-1491911889:727401..727574Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:727401..727574TCONS_00057342-exon-scaffold_288-1510915933:727401..727574Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:727401..727574TCONS_00057342-exon-scaffold_288-1575043694:727401..727574Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:727734..727806TCONS_00057342-exon-scaffold_288-1491911889:727734..727806Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:727734..727806TCONS_00057342-exon-scaffold_288-1510915933:727734..727806Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:727734..727806TCONS_00057342-exon-scaffold_288-1575043694:727734..727806Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1491911889:728568..729172TCONS_00057342-exon-scaffold_288-1491911889:728568..729172Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1510915933:728568..729172TCONS_00057342-exon-scaffold_288-1510915933:728568..729172Clytia hemisphaericaexon
TCONS_00057342-exon-scaffold_288-1575043694:728568..729172TCONS_00057342-exon-scaffold_288-1575043694:728568..729172Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057342-proteinTCONS_00057342-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:723798..729172 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.83375	1.95316	3.39252	1.1824	1.02766	1.31612	0.725477	1.14201	1.32076	0.679638	1.58591	0.830712	0.730142	3.6939	0.461263	1.77157	2.26531	2.678	1.34692	0.376635	1.97685	0.699162	1.33484	1.02151	23.8191	21.5	0.868697	0.739425	0.549692	0.953666
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057342 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top