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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057408 ID=TCONS_00057408|Name=TCONS_00057408|organism=Clytia hemisphaerica|type=transcript|length=1243bp
TTACAATTAAAGAGTTGCTCTTGAACATCACTAGCTACACACAACAACAA
TACAGACaggtatgatcttcatttttacacgtagaattatttgttgatat
ttgattaaGTTGTATTGTAAAACAGATTATCATTTACTTAGTATTTCACA
GAAGAATTTGTAGCAGAGGATGTCAATCTATAAGTGATAGAAGTTCACCA
TCCAGGATCCTTCCATTCTATAAGCCGGCAAAAACTAagtgacacttgta
aacttaagtttcttaccattttccatcaaaaacaatcgaaaacattacta
cttcccaaagccggagaccagaGCAAATGATCTTCCTTGATGAGGGCGCC
CTTTTGGATCTATTGTTAACTCATTTAAAATGGTGGACAGAGTTGCCGAA
TGATATAGGCGCCCGCCGCTTCGAGGGTGGTtacgccaaaacgcccaata
tgatcagccaacagaaggcgagtttgttgccgcgcgagttacgtcataca
ctccaccgTAGCGAAGGCACAAACAACATTTcgcaattataagaatatct
tatgtgcttaattctatttgactttgagagcttcattgaagatgaaaaag
tagaaagataagaaatgcgctggttaattttgtttaaataggtgtgttct
atcattgttgaaagttaGGGAAATTTCTACCCGCGCTaagattttttaca
gccaattaaaggcacagtctgcttataattactatgtttgctatatcgtc
taggcaaaaagtggtaaaaaaagacgcaaacgtaatttttttatgagtgc
agttatgatttttttgattgcggccgcgtacaggaactcgccaaatgttc
ctgaCTGAAGTTACTTTTTGCTAGCTAGCTAGGTAGGTGCGATGTGTTAA
ATGTCAATCGATGACTTATTGATTACCAACCGATTGATTGGATGTTGATT
GATTTCGATATTGATGACTATTCTAACTGATAATATATTAGTTTTTTAAT
CGATTGATCAATCGAACATATTAGATTAAATCGATGGAACATCGATCACG
TCAATTACAATTGATAACCAATCGAGCTTCCCGTAAAATCTTGATTAGGT
ATCGATTGTCTATCAATTTTCGAAATCAAACGATATTTAATCCATCGAGT
ATTTATCGATTAGTCATCGATTGGAAAAAGTTACCTTGGTTGCTACGCAG
GTGTCAAAGTTTAGGATTCCCACTCACAGCGGTTCACTTGAAA Run BLAST on NCBI transcript from alignment at scaffold_288:26237..27479 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057408 ID=TCONS_00057408|Name=TCONS_00057408|organism=Clytia hemisphaerica|type=transcript|length=1243bp|location=Sequence derived from alignment at scaffold_288:26237..27479 (Clytia hemisphaerica)
TTTCAAGTGAACCGCTGTGAGTGGGAATCCTAAACTTTGACACCTGCGTA
GCAACCAAGGTAACTTTTTCCAATCGATGACTAATCGATAAATACTCGAT
GGATTAAATATCGTTTGATTTCGAAAATTGATAGACAATCGATACCTAAT
CAAGATTTTACGGGAAGCTCGATTGGTTATCAATTGTAATTGACGTGATC
GATGTTCCATCGATTTAATCTAATATGTTCGATTGATCAATCGATTAAAA
AACTAATATATTATCAGTTAGAATAGTCATCAATATCGAAATCAATCAAC
ATCCAATCAATCGGTTGGTAATCAATAAGTCATCGATTGACATTTAACAC
ATCGCACCTACCTAGCTAGCTAGCAAAAAGTAACTTCAGtcaggaacatt
tggcgagttcctgtacgcggccgcaatcaaaaaaatcataactgcactca
taaaaaaattacgtttgcgtctttttttaccactttttgcctagacgata
tagcaaacatagtaattataagcagactgtgcctttaattggctgtaaaa
aatcttAGCGCGGGTAGAAATTTCCCtaactttcaacaatgatagaacac
acctatttaaacaaaattaaccagcgcatttcttatctttctactttttc
atcttcaatgaagctctcaaagtcaaatagaattaagcacataagatatt
cttataattgcgAAATGTTGTTTGTGCCTTCGCTAcggtggagtgtatga
cgtaactcgcgcggcaacaaactcgccttctgttggctgatcatattggg
cgttttggcgtaACCACCCTCGAAGCGGCGGGCGCCTATATCATTCGGCA
ACTCTGTCCACCATTTTAAATGAGTTAACAATAGATCCAAAAGGGCGCCC
TCATCAAGGAAGATCATTTGCtctggtctccggctttgggaagtagtaat
gttttcgattgtttttgatggaaaatggtaagaaacttaagtttacaagt
gtcactTAGTTTTTGCCGGCTTATAGAATGGAAGGATCCTGGATGGTGAA
CTTCTATCACTTATAGATTGACATCCTCTGCTACAAATTCTTCTGTGAAA
TACTAAGTAAATGATAATCTGTTTTACAATACAACttaatcaaatatcaa
caaataattctacgtgtaaaaatgaagatcatacctGTCTGTATTGTTGT
TGTGTGTAGCTAGTGATGTTCAAGAGCAACTCTTTAATTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057408-exon-scaffold_288-1491911889:26237..27479 | TCONS_00057408-exon-scaffold_288-1491911889:26237..27479 | Clytia hemisphaerica | exon |
| TCONS_00057408-exon-scaffold_288-1510915933:26237..27479 | TCONS_00057408-exon-scaffold_288-1510915933:26237..27479 | Clytia hemisphaerica | exon |
| TCONS_00057408-exon-scaffold_288-1575043694:26237..27479 | TCONS_00057408-exon-scaffold_288-1575043694:26237..27479 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:26237..27479 . |
Blast
The following BLAST results are available for this feature:
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