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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057412 ID=TCONS_00057412|Name=TCONS_00057412|organism=Clytia hemisphaerica|type=transcript|length=1146bp
CGAGGGCGTTACGGGCGTGAAGGGTGGTTTCTGGGTGTAGTACAGAGGCT
ATAAAATCGCCTCTGTACACCCTCCCCGCCCTGTTAAACAGGTTGGGAGC
GGTTTTTCCTAATACAATTCAAATAAATACCTGGGATGGCCAGGGCGTTT
CCGTCTGAACCAGTACAATAGCAAATTCTATATAATAATCCTATAAATAc
tatgaaaataaatattaaataatCTAAACTATATTCCTATAATCCACATA
ATATAACGTTAACTgtttaaataataatttttttgtaagaacatatTTAT
CTTATGACCTAAGTAATATGAGGTATAATAAGGGAGGAGGGTGGACATTT
TCCATTCCACATAACATAAACCATATCATTCCTATTCCACGGGGTCTCAA
CGACCCCAGAATAGTGTCCTTTTACGTGCCAAAGCTAGGATAGAAATTGT
CTGCTGTCTATGGTGATGACTGATTGAAAGTTAGGGCTGNGGCTAGGATA
GAAATTGTCTGTTGTCTATGGTGATGGCTGATTGAAAGTTAGGGCTGAAA
CCATGGTAGCGACTGTTGTTTTTCTCGTGGgatcgtttttgttttttaaa
acagTTCATTTTTGTTGTGTTGTTCGGTATTGCGTTTCGCTAGTAATTGG
AGGCATTTGATTGGTGGATTCCTTTCGACCAATCGTTGTGAATGTACGGG
GAATGACGTGTCTTTGGCagtaatatatttttcattgtctttttggATAC
CATTGGATATGGAGCGACCCTGCAAACTAATTTTTCTTCAGTTAATGGGC
GTTGAACGCCGTGTGGTCCTGTGCCACATGCCATGTCACCAACCTGGCGA
TCTGTCCAGGGTGTTTAAACGTTAAACCCTTCGACAATAAAAACGGATCC
GTCACGGCTACCAGATGTTGTGGCCGAGTTTGGCGTGGTGCCGACGATTT
CATTTGCTGCTATTGCGTCCCGGTGAGTGGTttcttttccctctttttcc
TTCAGGGGGTTAATCCATCGTAGGTCCTTCTGGGTTGGTTTAAGGTTTAG
TCTTCGTCTTGTTATTTCTGTTTCCTAGCCTGGCATCCAATCCATCCAAC
TTATTTAAATTACTTTCACGGCCCTCCTCCTTTTTACCTATATTAA Run BLAST on NCBI transcript from alignment at scaffold_288:31299..32444 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057412 ID=TCONS_00057412|Name=TCONS_00057412|organism=Clytia hemisphaerica|type=transcript|length=1146bp|location=Sequence derived from alignment at scaffold_288:31299..32444 (Clytia hemisphaerica)
TTAATATAGGTAAAAAGGAGGAGGGCCGTGAAAGTAATTTAAATAAGTTG
GATGGATTGGATGCCAGGCTAGGAAACAGAAATAACAAGACGAAGACTAA
ACCTTAAACCAACCCAGAAGGACCTACGATGGATTAACCCCCTGAAggaa
aaagagggaaaagaaACCACTCACCGGGACGCAATAGCAGCAAATGAAAT
CGTCGGCACCACGCCAAACTCGGCCACAACATCTGGTAGCCGTGACGGAT
CCGTTTTTATTGTCGAAGGGTTTAACGTTTAAACACCCTGGACAGATCGC
CAGGTTGGTGACATGGCATGTGGCACAGGACCACACGGCGTTCAACGCCC
ATTAACTGAAGAAAAATTAGTTTGCAGGGTCGCTCCATATCCAATGGTAT
ccaaaaagacaatgaaaaatatattactGCCAAAGACACGTCATTCCCCG
TACATTCACAACGATTGGTCGAAAGGAATCCACCAATCAAATGCCTCCAA
TTACTAGCGAAACGCAATACCGAACAACACAACAAAAATGAActgtttta
aaaaacaaaaacgatcCCACGAGAAAAACAACAGTCGCTACCATGGTTTC
AGCCCTAACTTTCAATCAGCCATCACCATAGACAACAGACAATTTCTATC
CTAGCCNCAGCCCTAACTTTCAATCAGTCATCACCATAGACAGCAGACAA
TTTCTATCCTAGCTTTGGCACGTAAAAGGACACTATTCTGGGGTCGTTGA
GACCCCGTGGAATAGGAATGATATGGTTTATGTTATGTGGAATGGAAAAT
GTCCACCCTCCTCCCTTATTATACCTCATATTACTTAGGTCATAAGATAA
atatgttcttacaaaaaaattattatttaaacAGTTAACGTTATATTATG
TGGATTATAGGAATATAGTTTAGattatttaatatttattttcatagTAT
TTATAGGATTATTATATAGAATTTGCTATTGTACTGGTTCAGACGGAAAC
GCCCTGGCCATCCCAGGTATTTATTTGAATTGTATTAGGAAAAACCGCTC
CCAACCTGTTTAACAGGGCGGGGAGGGTGTACAGAGGCGATTTTATAGCC
TCTGTACTACACCCAGAAACCACCCTTCACGCCCGTAACGCCCTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057412-exon-scaffold_288-1491911889:31299..32444 | TCONS_00057412-exon-scaffold_288-1491911889:31299..32444 | Clytia hemisphaerica | exon |
| TCONS_00057412-exon-scaffold_288-1510915933:31299..32444 | TCONS_00057412-exon-scaffold_288-1510915933:31299..32444 | Clytia hemisphaerica | exon |
| TCONS_00057412-exon-scaffold_288-1575043694:31299..32444 | TCONS_00057412-exon-scaffold_288-1575043694:31299..32444 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:31299..32444 . |
Blast
The following BLAST results are available for this feature:
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