|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057429 ID=TCONS_00057429|Name=TCONS_00057429|organism=Clytia hemisphaerica|type=transcript|length=1162bp
AACCACGTCAGGGATCTTGAAGTGGGAGGCCTAAACCCCAGCCCTCGCTT
TTGGGGATTGTCGGGTCCATGTGTCACCTACGCGCAAGAGCCGTCGTGCG
CCTGACTGACGAAGTAGCATATCAAGGCTCACTGTCATTCCTCTTTAGCG
TGAAGGGCCGCCAATTTGCGATTGGAATGTCAGAAGAAAAAATTCATTAC
AGCTAACCGTCAATTGGCTAAGAGCTAAAATGGTTAGCGTTACTAAATAA
TATTAAGATCGAAATGTTTTCAGTAGTTGCTTTTTCCATGTACAGGCGTT
GACACTAAGTCACTGATATTGAACGCAAAAATTTAGGTAGCGTGGATTGG
GTCGTGACGCCCTCTTCTATAGCGAATACATACAAATAACTTTCCCACTA
TTTGAGTTTTGGCTGTGACTTTTCTCACTTCAATAACATGCATCATTCTT
GTTAGGCGTGGTTATTCTAAAGAAGTTTGTTTCTACAGATCGCCTTAGCG
AGTCcttaaaatttgaatgaatttcAACACGAAATATCCTGCCTCTTGTC
ATCACAGAATACCGTTTTGCACGATGCTGACAAGCTACTATTTTCTACAC
TCTAAATGTGCTTAAGAAGTGGAATTAATCGCTATTTCCTCACCACAAAA
TGTCTGTTTATTTGCTTTTGCCAGTGCTTTGATAACGGACAACCAACCTG
GGGCTCAGCAAACTGATCAACTACCATTGCTTTGCCGTACAAAAGGCCTG
GGCAAGAGGTTGGTTCGGATCACTTGGTTTATTTAATTAGACGGTTGACG
ACAAAAGAGAAAGAAAGCTTGTTTGTTGATTTCATTATATTCCCCGAACA
CTCAAACCTTATTGGTGGAAAATGTCGTCATACGGTAGATATAGCTATTA
TGATTGGTCCGCGAGGCTTAATCATTTGTTTAAAGCGCAACGGGACATAT
ATAGACAGGAGTTTTAGTATAATGTcaatttttgatggaaaattggatGT
GCTATGCTGGGAAAAAGAAGGAGTTGGtgtgttttgatgttttgaagTGG
TTTGTGGAATTATTTGTTAAGGCGTGAAAGCGATTGAAAAGAATTAGCTG
CTTCAGTTTTTGTAGTTTTCTTTATGATACGGTTTACGGGTATCATTTTT
TCTGTACATCAT Run BLAST on NCBI transcript from alignment at scaffold_288:384907..386068 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057429 ID=TCONS_00057429|Name=TCONS_00057429|organism=Clytia hemisphaerica|type=transcript|length=1162bp|location=Sequence derived from alignment at scaffold_288:384907..386068 (Clytia hemisphaerica)
ATGATGTACAGAAAAAATGATACCCGTAAACCGTATCATAAAGAAAACTA
CAAAAACTGAAGCAGCTAATTCTTTTCAATCGCTTTCACGCCTTAACAAA
TAATTCCACAAACCActtcaaaacatcaaaacacaCCAACTCCTTCTTTT
TCCCAGCATAGCACatccaattttccatcaaaaattgACATTATACTAAA
ACTCCTGTCTATATATGTCCCGTTGCGCTTTAAACAAATGATTAAGCCTC
GCGGACCAATCATAATAGCTATATCTACCGTATGACGACATTTTCCACCA
ATAAGGTTTGAGTGTTCGGGGAATATAATGAAATCAACAAACAAGCTTTC
TTTCTCTTTTGTCGTCAACCGTCTAATTAAATAAACCAAGTGATCCGAAC
CAACCTCTTGCCCAGGCCTTTTGTACGGCAAAGCAATGGTAGTTGATCAG
TTTGCTGAGCCCCAGGTTGGTTGTCCGTTATCAAAGCACTGGCAAAAGCA
AATAAACAGACATTTTGTGGTGAGGAAATAGCGATTAATTCCACTTCTTA
AGCACATTTAGAGTGTAGAAAATAGTAGCTTGTCAGCATCGTGCAAAACG
GTATTCTGTGATGACAAGAGGCAGGATATTTCGTGTTgaaattcattcaa
attttaagGACTCGCTAAGGCGATCTGTAGAAACAAACTTCTTTAGAATA
ACCACGCCTAACAAGAATGATGCATGTTATTGAAGTGAGAAAAGTCACAG
CCAAAACTCAAATAGTGGGAAAGTTATTTGTATGTATTCGCTATAGAAGA
GGGCGTCACGACCCAATCCACGCTACCTAAATTTTTGCGTTCAATATCAG
TGACTTAGTGTCAACGCCTGTACATGGAAAAAGCAACTACTGAAAACATT
TCGATCTTAATATTATTTAGTAACGCTAACCATTTTAGCTCTTAGCCAAT
TGACGGTTAGCTGTAATGAATTTTTTCTTCTGACATTCCAATCGCAAATT
GGCGGCCCTTCACGCTAAAGAGGAATGACAGTGAGCCTTGATATGCTACT
TCGTCAGTCAGGCGCACGACGGCTCTTGCGCGTAGGTGACACATGGACCC
GACAATCCCCAAAAGCGAGGGCTGGGGTTTAGGCCTCCCACTTCAAGATC
CCTGACGTGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057429-exon-scaffold_288-1491911889:384907..386068 | TCONS_00057429-exon-scaffold_288-1491911889:384907..386068 | Clytia hemisphaerica | exon |
| TCONS_00057429-exon-scaffold_288-1510915933:384907..386068 | TCONS_00057429-exon-scaffold_288-1510915933:384907..386068 | Clytia hemisphaerica | exon |
| TCONS_00057429-exon-scaffold_288-1575043694:384907..386068 | TCONS_00057429-exon-scaffold_288-1575043694:384907..386068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:384907..386068 . |
Blast
The following BLAST results are available for this feature:
|
