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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057479 ID=TCONS_00057479|Name=TCONS_00057479|organism=Clytia hemisphaerica|type=transcript|length=202bp
TCTTGCATTTCAATTACGATTTTCAGATAATGCCAGCAATACTACTGAGG
agaccaatatggacactgattTTGTACCGCTCATAAGTTCGTATTTAAAG
TCAGAAGAATTCGATCCTTGTTCTTTTCAGCAGCAGTTGAATCTTCCAAA
TGCCGGTGGGTATAATAACAGCACCACCAGTGGTGGTGGCGGTGGTGGTG
NA Run BLAST on NCBI transcript from alignment at scaffold_289:301440..308611- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057479 ID=TCONS_00057479|Name=TCONS_00057479|organism=Clytia hemisphaerica|type=transcript|length=7172bp|location=Sequence derived from alignment at scaffold_289:301440..308611- (Clytia hemisphaerica)
TCTTGCATTTCAATTACGATTTTCAGGTAAGATTATTGGTTACGTATTAT
GTTAATTGAAAACCATATTGAGATGTACTAGACACGGCCCAAAAATTATA
TATGCGATCTTAACAATTTCCCAGCTGGCACACAACGTTGTTTCAACGTT
TATCTAACGTTCACAATGTCCATTTAACGTTAGGTGAACGTTGAAACAAC
GTTGTGTGCCAGCTGGGTTATCACTCGGGCAAGTCAAAGCTTGTCAAAGC
TTGTACAAAAGATTAACAAACAAAATAAATATGGAACGACTAGTTGTTTA
TCTTGTTTTTGGTCATTTTTTTTGTCAATTTCCACGGTTTGAGTGTGATT
GATTCTATTTTATTTATTTTTATCCAAAACCCCTCCTTATTTCCCTGGAC
CTATGTATTATGACTCTATGAGTCATAGACTCTATACGTTGTAAATTTGT
TCGTTGATATTGAAGTACTTTTCCGGTATATAGACGGGTTTACAAAAATT
CATGATTGTGGTTTGGGTTCTTTCGTAAGTTTGCTGATGCTTTTTTAGAT
GTAACGGTTTTCATAAGGGTGTTGACCTTCTAGTGGTTTACATAGTCATC
CTAGGATTGATTTTCAATCGGGATTTGAAAAAAAAACATCGCATGCGTAC
TCTCAATACAATCTTTCCTCTATAGCAAAACATAGAAAAAAAGCGCCGAC
ATCTAGCCGAAAAGCTTGCCGATTCTAGGGTCTACCATACCGTTTACACG
TTTCTTTTATAAGAACATTCATTTAAGCCTTCGGATGTTCTTATCTTTTT
GAGTTTTAAGCCTGAAACATGTTCTTATTTTCACCATTTCTCGAGCATTT
ATCTAGGTTTTGCAATCTTTAAACATTATAGACTTTTGCTTGTCTAATTT
AGTTTTGATCTTGGATATTTAGGGAAGATTTTTAGATTGATGCTTGCGTC
TATACAACTACAACTACAGGAGCTTTTTATATAAATAGGTCAGTCAAGTT
TGAGGGATTATAGACCCCTTTTGATAATGCTAGGACAGAAAATATATATT
GCTTCATGAATTTTCTACCTCGTTCGATTTTTAGATTATAAAGTCAATAT
TTATACAATCAAATAATAACTTTGCAACATATAAGTAGTTTGGAGAGAAA
CATATATCTCCTCGGATGACGTCACCATAAGTTCATTGTATGACCAATCA
GCGTTTTTGTGTGGCATATTTGCTAAGTGACAAAGTGGGAAGAGAGGGGC
TGGAAGTCGTGGGCGAAATTAACAATGATTGCTGTCTATCCAAGCAAAGT
TTTTTATGATCTCATGATTAATAATTTGGGATCATATTTTGAGAATTGAG
TGTCAAATATTTGAATATTTTAAACATTATTATATTTTCCCTGGTCAGCT
TCCCAAGATTTTCTATGAAAATAGAATTACGGCCAAGCCCATTGAGTTTA
AAGCCTGAAGGGCTAGACTAGAATCTCTAACATTTCCAAGGCAAGAAAAA
GAAATCTGCGCTTAGAACACGCCGTAATCATGACGATGAATTGTATCTAG
TGGTTCCCTTGTTTTTGAGGATGCATTTTTTGAAATCTAGTGATAGATTT
TAGTTTTAATCCGGCATTCGTGTAAAAACCAAATGCGCGCGTTCTGGATA
GGAAATAAGTGGCTTCATTTCCCATGCAGGAGTCTCGAGTATAGCCCTTC
GGGTTTGGAAATCAATGGCAAAGGTATACATAGCTTCTAAACCGTTTTTA
CTCGGCGAAAATCTTTTTAAGTACAGTTTATCGTGATTCGATAAGCGCTT
TGTTTATTTCTTCTGCTCTCATTTTCCACTCTTTGAATTTTCTGATTTTC
TTAAGATCTGCTTTATCTTCACATAATTTTCAATCAATTTCTTCATGAAT
TTTCCGTTTTTGAATAAAACTTTGATGTCCAATATCTTTAGAGCCTTATT
GTCGATAAAGTTTCTTGCTTTAGACACCCGTCACTTTGATCAATGGCCTC
AGCATAAATACACCTTTTCAACCGTAGCCCCCAATTGCCGCGCGGACGTT
TTTTTGTCCAATTTACCACGCTAAAACCGTCCCAGTCTTTTTTCCGCACC
TATAGAGAAGGATTGGATCGAGTTTTGGGAGGTAATGAAACATGCACCTA
ACCACGCAACTATGGCCGAAAAGATCTATTGACAAAAAAAAGCAGCGTGA
TTCGTGATATAATTTAGGCTATTCTTTGCAGGCTGAATATGATGATTGCA
TCGATGATGATTGTCACCATGGTGACAAAGAATTCTGAGTGATGGTGGTA
AGAGCGTGGTTGTCGTGGAAAAGCTACCTGGAGCTATGCTTCGGGAGACA
AACAATCCGGAAATTTTGAACATAACTAAAGTATCAATCTCGATAGAGCC
ATGCTAGTTACACAATATTTTGATTTAATACAGTGTACTGTGATGGGTTG
AGCTTTATGAGCCTTTTGTGAGCGCTATTAGAATCAAGGAGGTGAACTGA
TGGAATTGATATAAATGACGAAAACGGAAGTATAACCGCTTTCATTGGAC
ATTAAAAAAGAGAAACACGAAGACCGTTCAAGGGCCGTCCTAAGGTCAAG
GCTCAGTTTGCATTTAATATTTCACCATACCAATGATAAACGTTTTCATT
TTAAAAACAGACTACTATTACGTCATAAACCTTTTATATGTTCAACAAGT
TTTTTTTTTTAATTACTCAGCTTTTTTCTTGATGTTTTGTGTTGTAACAA
GATCATCAATCTTAAGTAAAAGATTTCTCGGAAAAAGTCAGCAGGATAAC
GCTAGACAACTAAAAGTAGATTGTGTCGGGGTAGTGTTTGTAACACACTG
TGACAAGTGGTTCGAATGAAATAGAAGTAGAAGCTGTGTAAGTCGTTATT
CTTAATATGCGTAAGTCATTTTTCTAGCGGAAACACCCGAAAAAAGCCGG
GATTTGACCTCTCTCTGTTACTAAAAATAGAAACACAGAGGTAAAAAACT
GGCTTTTTTGGGTGCTCCCGTTAAAAAATATGACGTCATCTTGACTTACG
AATATCAAGAATTGTATTATTGTTAACCGGTTACTTTTTTGAAGCGGGCT
ATGGCTTTTTGCGCAATGCAATTAGTTTTTTTGCATGACGACGGGCCTAC
ACTTCGCAGAGTTGCCCGTTGCTAGAAAAATTCAAATGAAAATGAACCTC
TGCGTTGACATCATTTGCCTCATTTTTTTAAAAACAATTTTTGATCTCTT
TTTGCTTGTTTTTTTCTCGCTTTTTCCTCTATTTTTTCTGGATAAAGCGC
GAAAAATCAATCGAAGCTGAAGGATATGGTTATCTAATACAATAATGGCC
GTTTTTTCTGGCTGTACTGTGAAATAATTGCTCTCGATCAACGTAACAAC
TTCACAAGCTCGGTTGTTACAATATTTCTCAGTACAGTTCGTCTCGCTCA
CCGGTCATTATTGCATTTGAGTATTTTAGTAATAGAAGATGACGGCATCC
ACCAGGTCCAGTAGCCTATATATATATTTTACACTTTGCAAAATTTTACA
ATCGCACTTTTGATTAGCAACTCGCACTTTAAAACTTTAACTCGTACTTT
TGCACGCAGTCAACCTCGTCCCCATCATGTATCCTCAAGGATTTATTTAC
GTTACTACTGATGATGGACGCGCTAGAGAATATATCAGGCGCTTTTACCT
TCATGAAATCTACGATCGATTCTAAGAGCCTTTTAAAAGATTACAATTAT
GAATCTTTTTCACTAAAAAATGGCTTTCCCTCAATTTTTCGTGGATGTTA
TATTGGCGACGGGTGGGACATGGGCGCAGAGTACTTTTTAACGCTCTATG
TTGTAAAGAGGTCTGGGACCTCAAGGAAATTCCCCGAATTCGGAGGCGCA
TGCGCAAAAGCAAAGAAGGAAGTCATAATTAAGCGGGAGAAAATGAAAGT
AGATTATTCATCATTTTTTTTATCAAGCCAGTGGCAAAGGAATTTCTTTT
CATTATATATAATTAGTTTTGTATGATTCTTTGTGGCATATAATGGCTCA
TTAATCTCGTCATGATGAAATGCCGTCCTCGCAAAAAAGTGAATGTTTTG
TTTTGTTTCAAAATAAACATTTTACGTGATACGTGATTGAAGACACGATT
CGTGACCGAATATCGAGAAAGTCAGAGAAATCAAACCTTAAATGTTAAAT
CAATATATAACTTTATAGATTGGTGATTGGATTGGGTCAGTAGATAGATA
GACTAAATTTTATCATTCTTTTTTTTCTGATACAGAGTGAACAGTATACC
TACATTCGGTAGGGGGGGGGGTACTGGGGTTGTGCTTGAGCTGGCGGTGC
AGTGTGCCACCTGACTCTCAACCCTCTCACCTTGGGATTGCGATATTGGG
ACTAATTTGACCAATTTCTATCTTTCAGGGCAAAAAGTGGAAGTTTTCCT
ATTTTTCCGACCTGGGACTGGGTGGTTGAGAAGTTTGATTTTCATCCATC
CATAGACCTTCTGTCCTGTATATAATTCTGAAATGCCATGTCTAATTCCG
CCTCCGGCATCATAGCAGCTATATGGTCCAAATAAAATAAAACCTTCTGA
ATATAAGTTGTTTAAAAAAATCACTCTATTACTTGAGCCACTTTGCAGAT
CGGATAGTTGCTATGTTGGAATTAGACAAGGTATGTCAGCATTACAAAAA
GTTACCGTACTAACTGGTTATAATTATAATGGATGACATTCGTGCATTCA
TACTCGCCCATACTTCTGCCACAGCAAATGTCTTGATGTTTAGGGTGATG
TTGATAAACCATTAGATGACGGTAGAAAATGGGCTTTATGAGCTTTTCAG
CAGACATATTAAGGATGATGTCCAATAACTCATTCTGTCCAGGGAAAATC
AACTTAACGTTACTTTTTATGTTTATCTGTACATGTCTCCATCAACTCGC
GATTAAATATTCACTGAAGTGGAAACCCTCAAACATTGAGCGTGAAGCTC
AAGCATTTCAACATGTTTCATGCAACTTTTGAACAGTTCGTTGTTGGATT
TTTGGGAAAAGTTTCCCTGATTTTCCTGTTTTTTCCAGAAAATTTTCTGG
ATTTTCTGATTTTCAGAGAAAATTTTTCCCCTGCTTTTCCAATTTTGGGA
AAAGGTTTCACGGATCTGCTGATATTTTCTACCAAAGGTCCTGGGGAGTT
GAAAAATGAGCTTTCAGAAAGTTAAGTTGACCTAAGTCAACAGAAGATTC
TTTTAAATAAACTATTAACCAGCATCTTTTTATTTTCAAATAATATATAA
AGAGCAGTTTAAAATTCTGGGAAGAAGTCTTGCTTATGCTATATATAAAT
TGAAATTTCAATTAGATTTTTTATGTTACTTAAATTTCAACAGAAAGAAA
AGGATGCAGAGAAGGGACCTGAGATTGTTTCCATAATTAATTGTGACATT
TTAAAAATGAAGCGTAAACCCAGTTTTCTTTTCAAAAGTACAAGTATATA
CCTACTCTGCAACATGTCTGAAAAGGAAAAATAGTTTGCTGGCTAAAAAA
ATAAATTTTTGTGGAACAAGTTTTTGCAGAATTTCATTTCACGGTTTTTT
GAAAAATCAGCAAAATTAAATTCCGTGAAACACAAATATTGTCAGGATTT
CAAAAATCACCCCTAAAATTTGTCTTTTCAGCAAAAAATAGGATTAAAAA
TTAAAAATTCCGCAAAACTTCTGAATTTAGATTTTTGGTTATTCACAAAT
TTAAAGCTCATAAATTACAATAGAGGTGTGATTCTTCACACAAAAATTTC
TTCCCTTAACTCTTCGATCATCTTGTGCAGGGAAACAAATTTTTAACTAA
CTTTTTAACTTTTGAAACATTTATCCAATTGACTTGAAATTTAGCAAGTG
TGTACCAAATATGAAATGGCATCTTTGATGAAAATTTTGGCATATCATTG
ATGACGTCATCATTTTTTGAAAATAATTAAAATCGGAACCCCATTTAACC
TAGTAACTTGAATTTTTTTCGCTCAAATTTTTTGAGGCAACTCCAGGTGA
CATAAATTTTTTTTTAATTGCAAAATTTCGCATTTTAATTATTTCTGCTG
ACATCAGCAAAATTAAAAAAAAAATTTATGCAGAAATGTTTCTATTAAAG
ATATGCAGATTTGGATTTCATATTTATACCATCAGCCAAACTTGAGTTAT
TAAAAAAACAAGTTTTGCTGACGTCATCATTTTTTGGTTTTTGCCTAATA
ACTTTTTTGGGTGAAAAAATTAATTTTATTAACAGTGATTTCTGAATTCT
ACATCGTAATACGCTTCTTTAAAGGTATAAATGAATATGTCTAAGGCCCC
CAATTTTCTGCGCCAAACTTATGGCTTTTGGGACATGCCATAAGTTACCA
GAGGTGTAATTTACAGACTGGTCTGCAAAGTATCAAATACTCATGGGAAC
GAATTTTTTCTGTTACTAGTCTCTTTTATTTGACAAAACAGCCTTCAGGA
ACAGATTTCAGTCAAATTGAACAAGTCAATTAAATGATTTTGGTCAAGTT
TTGCAAATCAACTTCAGTTATCCATATCTACTGGTCAAAATTTCAAGGTC
ATAGCAGTTGTCAATCTTGAGATTTTAAGGGGGAGCTCGAGCCCCCCCCC
AAAAATGCTTTCCCTCCAATTAAAAAAATAGGAAGATGCTTGAAGGGTTA
AGGTATCCCTCAAATACCTCAAATGCTTGCACACATTTTGTTACTTTTTT
TCCGAAACCTAAACTTCCATAAAAATTTGATTCAAAACTTACTCAAAAAC
ATTTTTAGGGAAATGGTGTGACGCTTATTGATTATCTTACCAAGCAACAC
CCAATAATAAAGTTTTATTGAATCTCAACAAATTTTTGGATGTTTACATT
TTTAATTTTAACTTTAGCACGATAAAATGATACTGAAGGACACTACTGGC
TGCTGAGTCATGAAATATTTGCATTTGTGATTAATTCTTTAGGAAGATAA
TGCCAGCAATACTACTGAGGAGACCAATATGGACACTGATTTTGTACCGC
TCATAAGTTCGTATTTAAAGTCAGAAGAATTCGATCCTTGTTCTTTTCAG
CAGCAGTTGAATCTTCCAAATGCCGGTGGGTATAATAACAGCACCACCAG
TGGTGGTGGCGGTGGTGGTGNA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00057479-exon-scaffold_289-1575043694:308586..308611 | TCONS_00057479-exon-scaffold_289-1575043694:308586..308611 | Clytia hemisphaerica | exon |
| TCONS_00057479-exon-scaffold_289-1575043694:301440..301615 | TCONS_00057479-exon-scaffold_289-1575043694:301440..301615 | Clytia hemisphaerica | exon |
| TCONS_00057479-exon-scaffold_289-1510915933:308586..308611 | TCONS_00057479-exon-scaffold_289-1510915933:308586..308611 | Clytia hemisphaerica | exon |
| TCONS_00057479-exon-scaffold_289-1510915933:301440..301615 | TCONS_00057479-exon-scaffold_289-1510915933:301440..301615 | Clytia hemisphaerica | exon |
| TCONS_00057479-exon-scaffold_289-1491911889:308586..308611 | TCONS_00057479-exon-scaffold_289-1491911889:308586..308611 | Clytia hemisphaerica | exon |
| TCONS_00057479-exon-scaffold_289-1491911889:301440..301615 | TCONS_00057479-exon-scaffold_289-1491911889:301440..301615 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_289 | supercontig | scaffold_289:301440..308611 - |
Blast
The following BLAST results are available for this feature:
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