TCONS_00057502 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057502
Unique NameTCONS_00057502
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length113

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057502 ID=TCONS_00057502|Name=TCONS_00057502|organism=Clytia hemisphaerica|type=transcript|length=113bp
ATAAatgttgatttattttttactactttatctGAAGTTATTCATTATTA
TGAACCAAATTATAACAACATCTATATCTCTGGAGATTTCAATCTTGAAC
CTACTGAtttgaa
Run BLAST on NCBI

transcript from alignment at scaffold_289:408448..408560

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057502 ID=TCONS_00057502|Name=TCONS_00057502|organism=Clytia hemisphaerica|type=transcript|length=113bp|location=Sequence derived from alignment at scaffold_289:408448..408560 (Clytia hemisphaerica)
ttcaaaTCAGTAGGTTCAAGATTGAAATCTCCAGAGATATAGATGTTGTT
ATAATTTGGTTCATAATAATGAATAACTTCagataaagtagtaaaaaata
aatcaacatTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036243XLOC_036243Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057502-exon-scaffold_289-1491911889:408448..408560TCONS_00057502-exon-scaffold_289-1491911889:408448..408560Clytia hemisphaericaexon
TCONS_00057502-exon-scaffold_289-1510915933:408448..408560TCONS_00057502-exon-scaffold_289-1510915933:408448..408560Clytia hemisphaericaexon
TCONS_00057502-exon-scaffold_289-1575043694:408448..408560TCONS_00057502-exon-scaffold_289-1575043694:408448..408560Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_289supercontigscaffold_289:408448..408560 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057502 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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