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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057528 ID=TCONS_00057528|Name=TCONS_00057528|organism=Clytia hemisphaerica|type=transcript|length=980bp
gttcaaattatagaaagattcgaataatagaggttcgaattaaaatGTTC
TGtatttatttacaatatttttcaaaaaaaataaagatcccttgcaataa
aaatttattaaatcCAAACCAAACTAACgaaacaaaaacagaacaaagga
aattccacaaaaataCATTGCAATCCAGGAGGAGATCGCATCTTCAAGAT
CAAAAGATTAGGCTAAATAGAGCAGAGCCTAAATAGTCAAGCCAATAGCC
AACTCTTTGAATCATGCTATTTTTGTTTAGTTCTACAAAATTGCCGACAA
GAAACATTTTACAAAAGTCACTTAATTTTCTAGTTCTCGAACAAACCATT
TGCTCGtggaaaaaatacaaaagataAACTCATGTCATTACCAGGCGTTG
TTAAAATCAACTGAGGAACGATAACATAAGTTTGTGCAGTATGATGTCCA
ATTTGGAACGGAGTTCATTGACCAAATATAATCTTCTCTCCAATTTGGAC
AGGAGAAAGTTTTAATCCATCGAGTTTAATTCAGGAGGGTATAAGGCAAA
TATGAAAATGATCATTAGATTAGTACCTCTGTCACCGAAATTACCCGAGA
AAAAGGTGTCTTTGATTTCGATTGAATGGCCAGTTAAGTAAGGAAAAGGC
AAGTGGCAATGCATTTTTGCATGTAATAAGCAATCCATCCACAATCCCTT
CTCTTCGAAgataattttaatttacatCCAGTATTTGGCGGTGTTTAAAA
CCAGGAACGTCATAAGTCCCATTGACACAGTCATTGTCCAAACAGCAACT
TTGACAAGAGGATTCGTTGTCTGGTTGCTGCCAAGCAACGCTAACTGCTT
CCCATAGGTATCTCTGACCTCAGTTAAGGGGATCAATGAAGTGTCGGTAA
ATAAAAGGCCTTTCGTTTCCGTGATATTCGATCCGGTTTTTGATTGTAGG
ATCGATACAGTAGTTCAGCATGGTGAATCT Run BLAST on NCBI transcript from alignment at scaffold_291:4860..5839 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057528 ID=TCONS_00057528|Name=TCONS_00057528|organism=Clytia hemisphaerica|type=transcript|length=980bp|location=Sequence derived from alignment at scaffold_291:4860..5839 (Clytia hemisphaerica)
AGATTCACCATGCTGAACTACTGTATCGATCCTACAATCAAAAACCGGAT
CGAATATCACGGAAACGAAAGGCCTTTTATTTACCGACACTTCATTGATC
CCCTTAACTGAGGTCAGAGATACCTATGGGAAGCAGTTAGCGTTGCTTGG
CAGCAACCAGACAACGAATCCTCTTGTCAAAGTTGCTGTTTGGACAATGA
CTGTGTCAATGGGACTTATGACGTTCCTGGTTTTAAACACCGCCAAATAC
TGGatgtaaattaaaattatcTTCGAAGAGAAGGGATTGTGGATGGATTG
CTTATTACATGCAAAAATGCATTGCCACTTGCCTTTTCCTTACTTAACTG
GCCATTCAATCGAAATCAAAGACACCTTTTTCTCGGGTAATTTCGGTGAC
AGAGGTACTAATCTAATGATCATTTTCATATTTGCCTTATACCCTCCTGA
ATTAAACTCGATGGATTAAAACTTTCTCCTGTCCAAATTGGAGAGAAGAT
TATATTTGGTCAATGAACTCCGTTCCAAATTGGACATCATACTGCACAAA
CTTATGTTATCGTTCCTCAGTTGATTTTAACAACGCCTGGTAATGACATG
AGTTtatcttttgtattttttccaCGAGCAAATGGTTTGTTCGAGAACTA
GAAAATTAAGTGACTTTTGTAAAATGTTTCTTGTCGGCAATTTTGTAGAA
CTAAACAAAAATAGCATGATTCAAAGAGTTGGCTATTGGCTTGACTATTT
AGGCTCTGCTCTATTTAGCCTAATCTTTTGATCTTGAAGATGCGATCTCC
TCCTGGATTGCAATGtatttttgtggaatttcctttgttctgtttttgtt
tcGTTAGTTTGGTTTGgatttaataaatttttattgcaagggatctttat
tttttttgaaaaatattgtaaataaataCAGAACattttaattcgaacct
ctattattcgaatctttctataatttgaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057528-exon-scaffold_291-1491911889:4860..5839 | TCONS_00057528-exon-scaffold_291-1491911889:4860..5839 | Clytia hemisphaerica | exon |
| TCONS_00057528-exon-scaffold_291-1510915933:4860..5839 | TCONS_00057528-exon-scaffold_291-1510915933:4860..5839 | Clytia hemisphaerica | exon |
| TCONS_00057528-exon-scaffold_291-1575043694:4860..5839 | TCONS_00057528-exon-scaffold_291-1575043694:4860..5839 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_291 | supercontig | scaffold_291:4860..5839 . |
Blast
The following BLAST results are available for this feature:
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