TCONS_00057542 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057542
Unique NameTCONS_00057542
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057542 ID=TCONS_00057542|Name=TCONS_00057542|organism=Clytia hemisphaerica|type=transcript|length=151bp
GTTTTCGGGGAAAACGGGCTCACATAATCGGGAAATCGGGCACACAGAAT
CGGGAAATTGAGAAATTATGCTTTAAAAATTCATGAGATTTCTCATAAAA
TCTATTAGAAAATCTAAACAAGTGTTTCCAGAATGTCAAAGATATTCCTC
T
Run BLAST on NCBI

transcript from alignment at scaffold_291:236975..237125

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057542 ID=TCONS_00057542|Name=TCONS_00057542|organism=Clytia hemisphaerica|type=transcript|length=151bp|location=Sequence derived from alignment at scaffold_291:236975..237125 (Clytia hemisphaerica)
AGAGGAATATCTTTGACATTCTGGAAACACTTGTTTAGATTTTCTAATAG
ATTTTATGAGAAATCTCATGAATTTTTAAAGCATAATTTCTCAATTTCCC
GATTCTGTGTGCCCGATTTCCCGATTATGTGAGCCCGTTTTCCCCGAAAA
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036279XLOC_036279Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057542-exon-scaffold_291-1491911889:236975..237125TCONS_00057542-exon-scaffold_291-1491911889:236975..237125Clytia hemisphaericaexon
TCONS_00057542-exon-scaffold_291-1510915933:236975..237125TCONS_00057542-exon-scaffold_291-1510915933:236975..237125Clytia hemisphaericaexon
TCONS_00057542-exon-scaffold_291-1575043694:236975..237125TCONS_00057542-exon-scaffold_291-1575043694:236975..237125Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_291supercontigscaffold_291:236975..237125 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057542 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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