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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057625 ID=TCONS_00057625|Name=TCONS_00057625|organism=Clytia hemisphaerica|type=transcript|length=854bp
ccgatatcgtctatttcaAATTCTGTATGTGTCACGCTAAAATAGTAGgt
cgatatcgtctattctttTAGTATATAAATATaagtaaatttaattttta
aattacATGATACCTAAATCattaaaaattaattcaaaatatgttgcttt
ttaaacactcctgtgtcacagacccggtggtcCGGAGCGGGGAGCATCCA
CAacttcagccccactgggataTTGACTTTCAATTGAATAATTTCGTTCT
AAGCATCTCCACAGGATTTATCCCCACTGCTGGAAGAAGTtccatcgggg
ctgtgagacgAGGATGTTTAATCTTATCACTAGATAAGATATTTTGTCGA
GTATAAATCAATGAAAGTCGACTTTAACGATGTTATTGTCCATTAAATCA
ATAACTTAACAAATAGTTTTCGTTGACATCATACATTACTGAACGAGCAT
GTCTGCATTTCCGATAAAACAAGTGATAGAAATCAATATCTGGACAACAA
TATTTCTTTTGCCAGTAACATGCGATCAAAGTCACCACAAGACCAAATAA
AATTATCATCACCAGAATTGTGAACACCAAAAGAAAAACGCTGACTTCGG
TACGTGGATAGTTGCGGAAGCTTTTATGGTCAGGTTCTGGATCAAATGTA
TCGAGAATCTCAAATCCGGTTTCATCATTCTCGGTCTTGGCATTTCTTCG
TTTGATTCTATGTTCCCGATCTTTGTTCACAATTTGCGTTTCATCATAAC
CAAAGCTGTTTTTTTGGGACGAAAATTCGAATTCCTGTAATTTTCGAGCA
GATTTAGTAAGTGTTCTTGTATATACGGTGAAGAACGAAATTATAACAAT
GAAC Run BLAST on NCBI protein sequence of TCONS_00057625-protein >TCONS_00057625-protein ID=TCONS_00057625-protein|Name=TCONS_00057625-protein|organism=Clytia hemisphaerica|type=polypeptide|length=151bp
FIVIISFFTVYTRTLTKSARKLQEFEFSSQKNSFGYDETQIVNKDREHRI
KRRNAKTENDETGFEILDTFDPEPDHKSFRNYPRTEVSVFLLVFTILVMI
ILFGLVVTLIACYWQKKYCCPDIDFYHLFYRKCRHARSVMYDVNENYLLS
Y Run BLAST on NCBI transcript from alignment at scaffold_294:115526..116379 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057625 ID=TCONS_00057625|Name=TCONS_00057625|organism=Clytia hemisphaerica|type=transcript|length=854bp|location=Sequence derived from alignment at scaffold_294:115526..116379 (Clytia hemisphaerica)
GTTCATTGTTATAATTTCGTTCTTCACCGTATATACAAGAACACTTACTA
AATCTGCTCGAAAATTACAGGAATTCGAATTTTCGTCCCAAAAAAACAGC
TTTGGTTATGATGAAACGCAAATTGTGAACAAAGATCGGGAACATAGAAT
CAAACGAAGAAATGCCAAGACCGAGAATGATGAAACCGGATTTGAGATTC
TCGATACATTTGATCCAGAACCTGACCATAAAAGCTTCCGCAACTATCCA
CGTACCGAAGTCAGCGTTTTTCTTTTGGTGTTCACAATTCTGGTGATGAT
AATTTTATTTGGTCTTGTGGTGACTTTGATCGCATGTTACTGGCAAAAGA
AATATTGTTGTCCAGATATTGATTTCTATCACTTGTTTTATCGGAAATGC
AGACATGCTCGTTCAGTAATGTATGATGTCAACGAAAACTATTTGTTAAG
TTATTGATTTAATGGACAATAACATCGTTAAAGTCGACTTTCATTGATTT
ATACTCGACAAAATATCTTATCTAGTGATAAGATTAAACATCCTcgtctc
acagccccgatggaACTTCTTCCAGCAGTGGGGATAAATCCTGTGGAGAT
GCTTAGAACGAAATTATTCAATTGAAAGTCAAtatcccagtggggctgaa
gtTGTGGATGCTCCCCGCTCCGgaccaccgggtctgtgacacaggagtgt
ttaaaaagcaacatattttgaattaatttttaatGATTTAGGTATCATgt
aatttaaaaattaaatttacttATATTTATATACTAaaagaatagacgat
atcgacCTACTATTTTAGCGTGACACATACAGAATTtgaaatagacgata
tcgg Coding sequence (CDS) from alignment at scaffold_294:115526..116379 >TCONS_00057625 ID=TCONS_00057625|Name=TCONS_00057625|organism=Clytia hemisphaerica|type=CDS|length=456bp|location=Sequence derived from alignment at scaffold_294:115526..116379 (Clytia hemisphaerica)
TTCATTGTTATAATTTCGTTCTTCACCGTATATACAAGAACACTTACTAA
ATCTGCTCGAAAATTACAGGAATTCGAATTTTCGTCCCAAAAAAACAGCT
TTGGTTATGATGAAACGCAAATTGTGAACAAAGATCGGGAACATAGAATC
AAACGAAGAAATGCCAAGACCGAGAATGATGAAACCGGATTTGAGATTCT
CGATACATTTGATCCAGAACCTGACCATAAAAGCTTCCGCAACTATCCAC
GTACCGAAGTCAGCGTTTTTCTTTTGGTGTTCACAATTCTGGTGATGATA
ATTTTATTTGGTCTTGTGGTGACTTTGATCGCATGTTACTGGCAAAAGAA
ATATTGTTGTCCAGATATTGATTTCTATCACTTGTTTTATCGGAAATGCA
GACATGCTCGTTCAGTAATGTATGATGTCAACGAAAACTATTTGTTAAGT
TATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057625-exon-scaffold_294-1491911889:115526..116379 | TCONS_00057625-exon-scaffold_294-1491911889:115526..116379 | Clytia hemisphaerica | exon |
| TCONS_00057625-exon-scaffold_294-1510915933:115526..116379 | TCONS_00057625-exon-scaffold_294-1510915933:115526..116379 | Clytia hemisphaerica | exon |
| TCONS_00057625-exon-scaffold_294-1575043694:115526..116379 | TCONS_00057625-exon-scaffold_294-1575043694:115526..116379 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_294 | supercontig | scaffold_294:115526..116379 . |
Blast
The following BLAST results are available for this feature:
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