TCONS_00057648 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057648
Unique NameTCONS_00057648
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1620

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057648 ID=TCONS_00057648|Name=TCONS_00057648|organism=Clytia hemisphaerica|type=transcript|length=1620bp
GGCAACTTCCTCGCTAAAAGACATGGTGTTATATTACAAAAACAATTCAT
TTCCATGCAAAGTTGTCAACAAAGTGTGTCTTTCTTGTCACAAAGAATTG
CCATATGATGGATTGGACGATTCCATTATCAACATGGAGAAGTTTCTCAT
CCATCACACGGTCCTCAGAGATTATATGTTTCATTTCCTGAATGGAAACA
GTTGTACCATGTTCAGTTATTATGAAGTTATGATGGCTGTTCAGAAAGAT
AGTGGAGATTTGGAATTGAAGTCTTGGTACGCATATCTGAAACTTCTTGA
CGTGTCATTTACCTCAAGTGCCGAATGCGATAAATGTGGCAAGGTCCCTA
ATATTGTTGTATGTGATGCCACCGGGATGGGTTTTCAAAAGAAGTTCCTG
GCTTCTGGGCTGTGCGATACCGTACGAAGCAAGCCAATGCAAAGATATTC
AAAGCATGGCAGTAGACTAGCGATCGACGATGCACCTTTCAGAAAACGTT
TCAGGCGTTGGCTTGATGGGAAAATGAATCCTGCTGCCTCTCAAGCGTTC
AGAAAAGACCTCCAGAACCTCAATAAACAGATCCACAAGGTCATTGAATG
GGGTTACACCAAGTACCAAACTGACAGTCGCTTTCCAAAAGCTTTTAAGG
ACGTCCTTCGTTTGTTTGCATCTGCTTCTCCCGTTTGTTCTTATTTCCCT
CCTAACGAAGATTCGACGAAACTTTCAATGAAAATGCTGGATGAAAACGT
TAAAGCAGACAGTGAGACGATGCGTCAGATCCAAGAAGTCTTCCCATTGT
TCCACTCGCTGCTCTCCATCCTACCTTGTTGCCTTCCCGGTGTTTGGAAA
GGGCTTCTGCTTTATCTCTATGACAAGGCAAATGACCCTTTTATCAACGC
AAGTGTTATCAACACTCCGAAACACCCGAAATCTGCTGAAATCAGCAGTT
TCCCAAATCTACCAAAATTACGCAAGCGTGGTTTCTTTGAGATGGATTTC
GACAAAACAAAACAAAAGGATTGTCGAAAGAACCACACTGGCCATCGAAA
TTTGACCTCCGGAATATTTACCCTTTACTGTCAGCATGGTGTTTGTCTTG
GTTACCAAATAATGGCAAAAAAGGAATCACCTGACGTTCCCTTCACAATT
TTCAGAACAAGATTTCCTAAAGCACCGGGCATGATAATTTACGATAATGC
TTGCAACTTGCATACTTATGCACTAAACCGAGACCCGCTATTCTTCCAAC
ACACAAAATTTGTCGTCGATCGTTTTCATTGGAGGAACCATACAGCTTGT
TCATTTGGCTACTGCATGAAACTTTACTCAACGATGCAACACATTAACTC
GGAAGTAAACGAACAAGAGAACTCTAGAGTGAAAAAATTGAAGACGCAGC
TTGCCTACATGACACCTGAAAATTTTATTCGGCACTGTGACTTATTTTTC
TGGCACAGAAATCAAAAACGTATGCCATTCTAATAATATTAtaatttttg
taactttttctgAGGGAAAATTGATGCTTCACCTAATTtagaattgttct
taatttagCGTGAAACCTTTTTTATATCTAATTCACAATATCAAATTTGA
TCTTGTAATTAgtgtgaaag
Run BLAST on NCBI

protein sequence of TCONS_00057648-protein

>TCONS_00057648-protein ID=TCONS_00057648-protein|Name=TCONS_00057648-protein|organism=Clytia hemisphaerica|type=polypeptide|length=493bp
ATSSLKDMVLYYKNNSFPCKVVNKVCLSCHKELPYDGLDDSIINMEKFLI
HHTVLRDYMFHFLNGNSCTMFSYYEVMMAVQKDSGDLELKSWYAYLKLLD
VSFTSSAECDKCGKVPNIVVCDATGMGFQKKFLASGLCDTVRSKPMQRYS
KHGSRLAIDDAPFRKRFRRWLDGKMNPAASQAFRKDLQNLNKQIHKVIEW
GYTKYQTDSRFPKAFKDVLRLFASASPVCSYFPPNEDSTKLSMKMLDENV
KADSETMRQIQEVFPLFHSLLSILPCCLPGVWKGLLLYLYDKANDPFINA
SVINTPKHPKSAEISSFPNLPKLRKRGFFEMDFDKTKQKDCRKNHTGHRN
LTSGIFTLYCQHGVCLGYQIMAKKESPDVPFTIFRTRFPKAPGMIIYDNA
CNLHTYALNRDPLFFQHTKFVVDRFHWRNHTACSFGYCMKLYSTMQHINS
EVNEQENSRVKKLKTQLAYMTPENFIRHCDLFFWHRNQKRMPF
Run BLAST on NCBI

transcript from alignment at scaffold_296:8213..12003-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057648 ID=TCONS_00057648|Name=TCONS_00057648|organism=Clytia hemisphaerica|type=transcript|length=3791bp|location=Sequence derived from alignment at scaffold_296:8213..12003- (Clytia hemisphaerica)
GGCAACTTCCTCGCTAAAAGACATGGTGTTATATTACAAAAACAATTCAT
TTCCATGCAAAGGTTTGTTAAAACATTCACTTCAATAAATTAATTAAACT
TCAATAAACATCCTACAAATTAAATATTTATATTTCGTCCTCTAAATTAT
AGTAAAATTGCGGCTTATAGTAAAGCGGCTTTATTTGAAACAAGATTTTT
TCTCCTATGAAAATTATTTTTTTGAAGATTTTCACCAAAGTGGCATAAAA
CTGCCAGTACCATAATAAAGAAAGTGTCTTTTCTTCCTGACGACTTACTT
ATTAAATAATTTTGATCTACGTTCAACAAGAGATAAGTTACAAAATAAAA
TTTTCATATATTGAAAAATATTGCCATATTTCCANGAGATAAGTTACAAA
ATAAAATTTTCATATATGGAAAAATAGTGCCATATTTCCAAATTTTTGCT
AATGAATTATATTTTATCCCTTCTAGTTGTCAACAAAGTGTGTCTTTCTT
GTCACAAAGAATTGCCATATGATGGATTGGACGATTCCATTATCAACATG
GAGAAGTTTCTCATCCATCACACGGTCCTCAGAGATTATATGTTTCATTT
CCTGAATGGAAACAGGTACATAGTTTCCTCCCCCTTTATAAATGTTCTAA
TTTTGCCAATTTTTTGAAGTGTNTAGTTTCCTCCCCCTTTATAAATGTTC
TAATTTTGCCAATTTTTTTAAGTGTGGGGGGAAATGAAAAACTTCAAATG
GGGGGAAACCAAGAGAGGGGAACCATAAATTTTGGAAATTTTGATTGAAA
ACTTTAAACTTGATTTAAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
GCAACCCAGGAGGACACCATGCAGGTAAAAGAAAACTTTATCGACTCTGC
TTTTACAGATAAAATTTGACTCGTACTCATTTGTTTAGGAAAATCCTACT
TATGATATATATTGAACATGGCATTGATGATTTTTCTAACAATTGCTTTT
TAACAACAATTTCTTCAGTTGTACCATGTTCAGTTATTATGAAGTTATGA
TGGCTGTTCAGAAAGATAGTGGAGATTTGGAATTGAAGTCTTGGTACGCA
TATCTGAAACTTCTTGACGTGTCATTTACCTCAAGTGCCGAATGCGATAA
ATGTGGCAAGGTCCCTAATATTGTTGTATGTGATGCCACCGGGATGGGTT
TTCAAAAGAAGTTCCTGGCTTCTGGGCTGTGCGATACCGTACGAAGCAAG
CCAATGCAAAGATATTCGTTAGTATTATATTCACTTTTTAAATCTCGAAG
AAAATAGCACAATTGCATTTAAAGTAAAAATTGGTCAACGGTGTTATGTT
ATTTACGCCTAAATATGAAAATATCCATCAAAATGTCCAATCCAGGCCAG
ATTAATATTGGTCTCAGCTCTGTTTCAAAAAATGATTACTGGCTTATATA
GATAAGACCAAACTTTCTATGATAATTTTAGACAAACCTTTGTGTATAGT
TAGTCGCTTGATACCTTTCTAGAAGGTAAAGTGAAACACTGTTTAATACT
AATAGTCCTTATTTTTCTAGAAAGCATGGCAGTAGACTAGCGATCGACGA
TGCACCTTTCAGAAAACGTTTCAGGCGTTGGCTTGATGGGAAAATGAATC
CTGCTGCCTCTCAAGCGTTCAGAAAAGACCTCCAGAACCTCAATAAACAG
ATCCACAAGGTCATTGAATGGGGTTACACCAAGTACCAAACTGACAGTCG
CTTTCCAAAAGCTTTTAAGGACGTCCTTCGTTTGTTTGCATCTGCTTCTC
CCGTTTGTTCTTATTTCCCTCCTAACGAAGATTCGACGAAACTTTCAATG
AAAATGCTGGATGAAAACGTTAAAGCAGACAGTGAGACGATGCGTCAGAT
CCAAGAAGTCTTCCCATTGTTCCACTCGCTGCTCTCCATCCTACCTTGTT
GCCTTCCCGGTGTTTGGAAAGGGCTTCTGCTTTATCTCTATGACAAGGCA
AATGACCCTTTTATCAACGCAAGTGTTATCAACACTCCGAAACACCCGAA
ATCTGCTGAAATCAGCAGGTATTCTAGCTTATTTTCAAAATATTGTACTA
TTTGATTTCCTTTATCAATTGGATGGATTTGGAAAATAGACCAAAATTGA
AAAAATCTCTATCAAATATAGAATTAAGATAAAACTGAAGTTTAAAAGAA
AAGTATTGTCTCCTATTTAGAGAATGTGGACGATTATTGACGACTTCTAT
GATCTTTATCTCGTAAATTGTGAACACCTTTCATTTTAGTTTCCCAAATC
TACCAAAATTACGCAAGCGTGGTTTCTTTGAGATGGATTTCGACAAAACA
AAACAAAAGGATTGTCGAAAGAACCACACTGGCCATCGAAATTTGACCTC
CGGAATATTTACCCTTTACTGTCAGCATGGTACGTCCTATTTCAGGTTTA
CAAATTTCTCCTGATGAAAAAAAGTTTGAACAAACATATACTTACCAATT
TTTACCTAATAGACCGATCTAAATAATAATATTCACACAAGTTACTTAAA
CTTTACGATACCAAATTCATTTGCACTCTTTATATGACAAGCATCGCGCT
GTATTCATCTTACCTTCATTTTCAGGTGTTTGTCTTGGTTACCAAATAAT
GGCAAAAAAGGAATCACCTGACGTTCCCTTCACAATTTTCAGAACAAGAT
TTCCTAAAGGTTTCGTTACCCTTTGTTTTTTTTTTTGTCTCTCTGACTCT
GATGGCCTCAGTTGCATTGTTGAATATTTGAGTAGTCCTGGCGGTTTTCA
AAAGGATCCTCAACCCTGAATTTGAATTAGAAATTGAAAATTTTTGCACT
CCTTAGAAAGAATATTGAATCTGCCGCTTCGACTTAATAGAACGTATCTT
AATAGAACGTGTCTTGACCATCATGTACATTTTTTGAAAATTAATTTTAC
TATTTTTTCAGCACCGGGCATGATAATTTACGATAATGCTTGCAACTTGC
ATACTTATGCACTAAACCGAGACCCGCTATTCTTCCAACACACAAAATTT
GTCGTCGATCGTTTTCATTGGAGGAACCATACAGGTTAGTCCAACGTTAA
AAAAAAGTGAAAAAAAATAAATAAAACAATAGTAGTCTGAATAATACCAT
CGAATTACCTCTGTCTGAATAACCAAATTGTTAAGAGATTTCGATTGTGT
TCAAAATCTAACAGCCAGAACGTTTTCAATTAAAAATGCATACAAAAGTT
AACTTTGACTTTATTGGTTAGCTTTTAGCCGTCAGAATGTGTTGTAGATG
TATATTAATTTCTTATATAGAGAATTAAAAAAGTTATATGCAAAACCTCT
TAAAAATTCGTTTTAGCTTGTTCATTTGGCTACTGCATGAAACTTTACTC
AACGATGCAACACATTAACTCGGAAGTAAACGAACAAGAGAACTCTAGAG
TGAAAAAATTGAAGACGCAGCTTGCCTACATGACACCTGAAAATTTTATT
CGGCACTGTGACTTATTTTTCTGGCACAGAAATCAAAAACGTATGCCATT
CTAATAATATTATAATTTTTGTAACTTTTTCTGAGGGAAAATTGATGCTT
CACCTAATTTAGAATTGTTCTTAATTTAGCGTGAAACCTTTTTTATATCT
AATTCACAATATCAAATTTGATCTTGTAATTAGTGTGAAAG

Coding sequence (CDS) from alignment at scaffold_296:8213..12003-

>TCONS_00057648 ID=TCONS_00057648|Name=TCONS_00057648|organism=Clytia hemisphaerica|type=CDS|length=11856bp|location=Sequence derived from alignment at scaffold_296:8213..12003- (Clytia hemisphaerica)
CTTGTTCATTTGGCTACTGCATGAAACTTTACTCAACGATGCAACACATT
AACTCGGAAGTAAACGAACAAGAGAACTCTAGAGTGAAAAAATTGAAGAC
GCAGCTTGCCTACATGACACCTGAAAATTTTATTCGGCACTGTGACTTAT
TTTTCTGGCACAGAAATCAAAAACGTATGCCATTCTAACACCGGGCATGA
TAATTTACGATAATGCTTGCAACTTGCATACTTATGCACTAAACCGAGAC
CCGCTATTCTTCCAACACACAAAATTTGTCGTCGATCGTTTTCATTGGAG
GAACCATACAGGTGTTTGTCTTGGTTACCAAATAATGGCAAAAAAGGAAT
CACCTGACGTTCCCTTCACAATTTTCAGAACAAGATTTCCTAAAGTTTCC
CAAATCTACCAAAATTACGCAAGCGTGGTTTCTTTGAGATGGATTTCGAC
AAAACAAAACAAAAGGATTGTCGAAAGAACCACACTGGCCATCGAAATTT
GACCTCCGGAATATTTACCCTTTACTGTCAGCATGAAAGCATGGCAGTAG
ACTAGCGATCGACGATGCACCTTTCAGAAAACGTTTCAGGCGTTGGCTTG
ATGGGAAAATGAATCCTGCTGCCTCTCAAGCGTTCAGAAAAGACCTCCAG
AACCTCAATAAACAGATCCACAAGGTCATTGAATGGGGTTACACCAAGTA
CCAAACTGACAGTCGCTTTCCAAAAGCTTTTAAGGACGTCCTTCGTTTGT
TTGCATCTGCTTCTCCCGTTTGTTCTTATTTCCCTCCTAACGAAGATTCG
ACGAAACTTTCAATGAAAATGCTGGATGAAAACGTTAAAGCAGACAGTGA
GACGATGCGTCAGATCCAAGAAGTCTTCCCATTGTTCCACTCGCTGCTCT
CCATCCTACCTTGTTGCCTTCCCGGTGTTTGGAAAGGGCTTCTGCTTTAT
CTCTATGACAAGGCAAATGACCCTTTTATCAACGCAAGTGTTATCAACAC
TCCGAAACACCCGAAATCTGCTGAAATCAGCAGTTGTACCATGTTCAGTT
ATTATGAAGTTATGATGGCTGTTCAGAAAGATAGTGGAGATTTGGAATTG
AAGTCTTGGTACGCATATCTGAAACTTCTTGACGTGTCATTTACCTCAAG
TGCCGAATGCGATAAATGTGGCAAGGTCCCTAATATTGTTGTATGTGATG
CCACCGGGATGGGTTTTCAAAAGAAGTTCCTGGCTTCTGGGCTGTGCGAT
ACCGTACGAAGCAAGCCAATGCAAAGATATTCTTGTCAACAAAGTGTGTC
TTTCTTGTCACAAAGAATTGCCATATGATGGATTGGACGATTCCATTATC
AACATGGAGAAGTTTCTCATCCATCACACGGTCCTCAGAGATTATATGTT
TCATTTCCTGAATGGAAACAGGCAACTTCCTCGCTAAAAGACATGGTGTT
ATATTACAAAAACAATTCATTTCCATGCAAAGCTTGTTCATTTGGCTACT
GCATGAAACTTTACTCAACGATGCAACACATTAACTCGGAAGTAAACGAA
CAAGAGAACTCTAGAGTGAAAAAATTGAAGACGCAGCTTGCCTACATGAC
ACCTGAAAATTTTATTCGGCACTGTGACTTATTTTTCTGGCACAGAAATC
AAAAACGTATGCCATTCTAACACCGGGCATGATAATTTACGATAATGCTT
GCAACTTGCATACTTATGCACTAAACCGAGACCCGCTATTCTTCCAACAC
ACAAAATTTGTCGTCGATCGTTTTCATTGGAGGAACCATACAGGTGTTTG
TCTTGGTTACCAAATAATGGCAAAAAAGGAATCACCTGACGTTCCCTTCA
CAATTTTCAGAACAAGATTTCCTAAAGTTTCCCAAATCTACCAAAATTAC
GCAAGCGTGGTTTCTTTGAGATGGATTTCGACAAAACAAAACAAAAGGAT
TGTCGAAAGAACCACACTGGCCATCGAAATTTGACCTCCGGAATATTTAC
CCTTTACTGTCAGCATGAAAGCATGGCAGTAGACTAGCGATCGACGATGC
ACCTTTCAGAAAACGTTTCAGGCGTTGGCTTGATGGGAAAATGAATCCTG
CTGCCTCTCAAGCGTTCAGAAAAGACCTCCAGAACCTCAATAAACAGATC
CACAAGGTCATTGAATGGGGTTACACCAAGTACCAAACTGACAGTCGCTT
TCCAAAAGCTTTTAAGGACGTCCTTCGTTTGTTTGCATCTGCTTCTCCCG
TTTGTTCTTATTTCCCTCCTAACGAAGATTCGACGAAACTTTCAATGAAA
ATGCTGGATGAAAACGTTAAAGCAGACAGTGAGACGATGCGTCAGATCCA
AGAAGTCTTCCCATTGTTCCACTCGCTGCTCTCCATCCTACCTTGTTGCC
TTCCCGGTGTTTGGAAAGGGCTTCTGCTTTATCTCTATGACAAGGCAAAT
GACCCTTTTATCAACGCAAGTGTTATCAACACTCCGAAACACCCGAAATC
TGCTGAAATCAGCAGTTGTACCATGTTCAGTTATTATGAAGTTATGATGG
CTGTTCAGAAAGATAGTGGAGATTTGGAATTGAAGTCTTGGTACGCATAT
CTGAAACTTCTTGACGTGTCATTTACCTCAAGTGCCGAATGCGATAAATG
TGGCAAGGTCCCTAATATTGTTGTATGTGATGCCACCGGGATGGGTTTTC
AAAAGAAGTTCCTGGCTTCTGGGCTGTGCGATACCGTACGAAGCAAGCCA
ATGCAAAGATATTCTTGTCAACAAAGTGTGTCTTTCTTGTCACAAAGAAT
TGCCATATGATGGATTGGACGATTCCATTATCAACATGGAGAAGTTTCTC
ATCCATCACACGGTCCTCAGAGATTATATGTTTCATTTCCTGAATGGAAA
CAGGCAACTTCCTCGCTAAAAGACATGGTGTTATATTACAAAAACAATTC
ATTTCCATGCAAAGCTTGTTCATTTGGCTACTGCATGAAACTTTACTCAA
CGATGCAACACATTAACTCGGAAGTAAACGAACAAGAGAACTCTAGAGTG
AAAAAATTGAAGACGCAGCTTGCCTACATGACACCTGAAAATTTTATTCG
GCACTGTGACTTATTTTTCTGGCACAGAAATCAAAAACGTATGCCATTCT
AACACCGGGCATGATAATTTACGATAATGCTTGCAACTTGCATACTTATG
CACTAAACCGAGACCCGCTATTCTTCCAACACACAAAATTTGTCGTCGAT
CGTTTTCATTGGAGGAACCATACAGGTGTTTGTCTTGGTTACCAAATAAT
GGCAAAAAAGGAATCACCTGACGTTCCCTTCACAATTTTCAGAACAAGAT
TTCCTAAAGTTTCCCAAATCTACCAAAATTACGCAAGCGTGGTTTCTTTG
AGATGGATTTCGACAAAACAAAACAAAAGGATTGTCGAAAGAACCACACT
GGCCATCGAAATTTGACCTCCGGAATATTTACCCTTTACTGTCAGCATGA
AAGCATGGCAGTAGACTAGCGATCGACGATGCACCTTTCAGAAAACGTTT
CAGGCGTTGGCTTGATGGGAAAATGAATCCTGCTGCCTCTCAAGCGTTCA
GAAAAGACCTCCAGAACCTCAATAAACAGATCCACAAGGTCATTGAATGG
GGTTACACCAAGTACCAAACTGACAGTCGCTTTCCAAAAGCTTTTAAGGA
CGTCCTTCGTTTGTTTGCATCTGCTTCTCCCGTTTGTTCTTATTTCCCTC
CTAACGAAGATTCGACGAAACTTTCAATGAAAATGCTGGATGAAAACGTT
AAAGCAGACAGTGAGACGATGCGTCAGATCCAAGAAGTCTTCCCATTGTT
CCACTCGCTGCTCTCCATCCTACCTTGTTGCCTTCCCGGTGTTTGGAAAG
GGCTTCTGCTTTATCTCTATGACAAGGCAAATGACCCTTTTATCAACGCA
AGTGTTATCAACACTCCGAAACACCCGAAATCTGCTGAAATCAGCAGTTG
TACCATGTTCAGTTATTATGAAGTTATGATGGCTGTTCAGAAAGATAGTG
GAGATTTGGAATTGAAGTCTTGGTACGCATATCTGAAACTTCTTGACGTG
TCATTTACCTCAAGTGCCGAATGCGATAAATGTGGCAAGGTCCCTAATAT
TGTTGTATGTGATGCCACCGGGATGGGTTTTCAAAAGAAGTTCCTGGCTT
CTGGGCTGTGCGATACCGTACGAAGCAAGCCAATGCAAAGATATTCTTGT
CAACAAAGTGTGTCTTTCTTGTCACAAAGAATTGCCATATGATGGATTGG
ACGATTCCATTATCAACATGGAGAAGTTTCTCATCCATCACACGGTCCTC
AGAGATTATATGTTTCATTTCCTGAATGGAAACAGGCAACTTCCTCGCTA
AAAGACATGGTGTTATATTACAAAAACAATTCATTTCCATGCAAAGCTTG
TTCATTTGGCTACTGCATGAAACTTTACTCAACGATGCAACACATTAACT
CGGAAGTAAACGAACAAGAGAACTCTAGAGTGAAAAAATTGAAGACGCAG
CTTGCCTACATGACACCTGAAAATTTTATTCGGCACTGTGACTTATTTTT
CTGGCACAGAAATCAAAAACGTATGCCATTCTAACACCGGGCATGATAAT
TTACGATAATGCTTGCAACTTGCATACTTATGCACTAAACCGAGACCCGC
TATTCTTCCAACACACAAAATTTGTCGTCGATCGTTTTCATTGGAGGAAC
CATACAGGTGTTTGTCTTGGTTACCAAATAATGGCAAAAAAGGAATCACC
TGACGTTCCCTTCACAATTTTCAGAACAAGATTTCCTAAAGTTTCCCAAA
TCTACCAAAATTACGCAAGCGTGGTTTCTTTGAGATGGATTTCGACAAAA
CAAAACAAAAGGATTGTCGAAAGAACCACACTGGCCATCGAAATTTGACC
TCCGGAATATTTACCCTTTACTGTCAGCATGAAAGCATGGCAGTAGACTA
GCGATCGACGATGCACCTTTCAGAAAACGTTTCAGGCGTTGGCTTGATGG
GAAAATGAATCCTGCTGCCTCTCAAGCGTTCAGAAAAGACCTCCAGAACC
TCAATAAACAGATCCACAAGGTCATTGAATGGGGTTACACCAAGTACCAA
ACTGACAGTCGCTTTCCAAAAGCTTTTAAGGACGTCCTTCGTTTGTTTGC
ATCTGCTTCTCCCGTTTGTTCTTATTTCCCTCCTAACGAAGATTCGACGA
AACTTTCAATGAAAATGCTGGATGAAAACGTTAAAGCAGACAGTGAGACG
ATGCGTCAGATCCAAGAAGTCTTCCCATTGTTCCACTCGCTGCTCTCCAT
CCTACCTTGTTGCCTTCCCGGTGTTTGGAAAGGGCTTCTGCTTTATCTCT
ATGACAAGGCAAATGACCCTTTTATCAACGCAAGTGTTATCAACACTCCG
AAACACCCGAAATCTGCTGAAATCAGCAGTTGTACCATGTTCAGTTATTA
TGAAGTTATGATGGCTGTTCAGAAAGATAGTGGAGATTTGGAATTGAAGT
CTTGGTACGCATATCTGAAACTTCTTGACGTGTCATTTACCTCAAGTGCC
GAATGCGATAAATGTGGCAAGGTCCCTAATATTGTTGTATGTGATGCCAC
CGGGATGGGTTTTCAAAAGAAGTTCCTGGCTTCTGGGCTGTGCGATACCG
TACGAAGCAAGCCAATGCAAAGATATTCTTGTCAACAAAGTGTGTCTTTC
TTGTCACAAAGAATTGCCATATGATGGATTGGACGATTCCATTATCAACA
TGGAGAAGTTTCTCATCCATCACACGGTCCTCAGAGATTATATGTTTCAT
TTCCTGAATGGAAACAGGCAACTTCCTCGCTAAAAGACATGGTGTTATAT
TACAAAAACAATTCATTTCCATGCAAAGCTTGTTCATTTGGCTACTGCAT
GAAACTTTACTCAACGATGCAACACATTAACTCGGAAGTAAACGAACAAG
AGAACTCTAGAGTGAAAAAATTGAAGACGCAGCTTGCCTACATGACACCT
GAAAATTTTATTCGGCACTGTGACTTATTTTTCTGGCACAGAAATCAAAA
ACGTATGCCATTCTAACACCGGGCATGATAATTTACGATAATGCTTGCAA
CTTGCATACTTATGCACTAAACCGAGACCCGCTATTCTTCCAACACACAA
AATTTGTCGTCGATCGTTTTCATTGGAGGAACCATACAGGTGTTTGTCTT
GGTTACCAAATAATGGCAAAAAAGGAATCACCTGACGTTCCCTTCACAAT
TTTCAGAACAAGATTTCCTAAAGTTTCCCAAATCTACCAAAATTACGCAA
GCGTGGTTTCTTTGAGATGGATTTCGACAAAACAAAACAAAAGGATTGTC
GAAAGAACCACACTGGCCATCGAAATTTGACCTCCGGAATATTTACCCTT
TACTGTCAGCATGAAAGCATGGCAGTAGACTAGCGATCGACGATGCACCT
TTCAGAAAACGTTTCAGGCGTTGGCTTGATGGGAAAATGAATCCTGCTGC
CTCTCAAGCGTTCAGAAAAGACCTCCAGAACCTCAATAAACAGATCCACA
AGGTCATTGAATGGGGTTACACCAAGTACCAAACTGACAGTCGCTTTCCA
AAAGCTTTTAAGGACGTCCTTCGTTTGTTTGCATCTGCTTCTCCCGTTTG
TTCTTATTTCCCTCCTAACGAAGATTCGACGAAACTTTCAATGAAAATGC
TGGATGAAAACGTTAAAGCAGACAGTGAGACGATGCGTCAGATCCAAGAA
GTCTTCCCATTGTTCCACTCGCTGCTCTCCATCCTACCTTGTTGCCTTCC
CGGTGTTTGGAAAGGGCTTCTGCTTTATCTCTATGACAAGGCAAATGACC
CTTTTATCAACGCAAGTGTTATCAACACTCCGAAACACCCGAAATCTGCT
GAAATCAGCAGTTGTACCATGTTCAGTTATTATGAAGTTATGATGGCTGT
TCAGAAAGATAGTGGAGATTTGGAATTGAAGTCTTGGTACGCATATCTGA
AACTTCTTGACGTGTCATTTACCTCAAGTGCCGAATGCGATAAATGTGGC
AAGGTCCCTAATATTGTTGTATGTGATGCCACCGGGATGGGTTTTCAAAA
GAAGTTCCTGGCTTCTGGGCTGTGCGATACCGTACGAAGCAAGCCAATGC
AAAGATATTCTTGTCAACAAAGTGTGTCTTTCTTGTCACAAAGAATTGCC
ATATGATGGATTGGACGATTCCATTATCAACATGGAGAAGTTTCTCATCC
ATCACACGGTCCTCAGAGATTATATGTTTCATTTCCTGAATGGAAACAGG
CAACTTCCTCGCTAAAAGACATGGTGTTATATTACAAAAACAATTCATTT
CCATGCAAAGCTTGTTCATTTGGCTACTGCATGAAACTTTACTCAACGAT
GCAACACATTAACTCGGAAGTAAACGAACAAGAGAACTCTAGAGTGAAAA
AATTGAAGACGCAGCTTGCCTACATGACACCTGAAAATTTTATTCGGCAC
TGTGACTTATTTTTCTGGCACAGAAATCAAAAACGTATGCCATTCTAACA
CCGGGCATGATAATTTACGATAATGCTTGCAACTTGCATACTTATGCACT
AAACCGAGACCCGCTATTCTTCCAACACACAAAATTTGTCGTCGATCGTT
TTCATTGGAGGAACCATACAGGTGTTTGTCTTGGTTACCAAATAATGGCA
AAAAAGGAATCACCTGACGTTCCCTTCACAATTTTCAGAACAAGATTTCC
TAAAGTTTCCCAAATCTACCAAAATTACGCAAGCGTGGTTTCTTTGAGAT
GGATTTCGACAAAACAAAACAAAAGGATTGTCGAAAGAACCACACTGGCC
ATCGAAATTTGACCTCCGGAATATTTACCCTTTACTGTCAGCATGAAAGC
ATGGCAGTAGACTAGCGATCGACGATGCACCTTTCAGAAAACGTTTCAGG
CGTTGGCTTGATGGGAAAATGAATCCTGCTGCCTCTCAAGCGTTCAGAAA
AGACCTCCAGAACCTCAATAAACAGATCCACAAGGTCATTGAATGGGGTT
ACACCAAGTACCAAACTGACAGTCGCTTTCCAAAAGCTTTTAAGGACGTC
CTTCGTTTGTTTGCATCTGCTTCTCCCGTTTGTTCTTATTTCCCTCCTAA
CGAAGATTCGACGAAACTTTCAATGAAAATGCTGGATGAAAACGTTAAAG
CAGACAGTGAGACGATGCGTCAGATCCAAGAAGTCTTCCCATTGTTCCAC
TCGCTGCTCTCCATCCTACCTTGTTGCCTTCCCGGTGTTTGGAAAGGGCT
TCTGCTTTATCTCTATGACAAGGCAAATGACCCTTTTATCAACGCAAGTG
TTATCAACACTCCGAAACACCCGAAATCTGCTGAAATCAGCAGTTGTACC
ATGTTCAGTTATTATGAAGTTATGATGGCTGTTCAGAAAGATAGTGGAGA
TTTGGAATTGAAGTCTTGGTACGCATATCTGAAACTTCTTGACGTGTCAT
TTACCTCAAGTGCCGAATGCGATAAATGTGGCAAGGTCCCTAATATTGTT
GTATGTGATGCCACCGGGATGGGTTTTCAAAAGAAGTTCCTGGCTTCTGG
GCTGTGCGATACCGTACGAAGCAAGCCAATGCAAAGATATTCTTGTCAAC
AAAGTGTGTCTTTCTTGTCACAAAGAATTGCCATATGATGGATTGGACGA
TTCCATTATCAACATGGAGAAGTTTCTCATCCATCACACGGTCCTCAGAG
ATTATATGTTTCATTTCCTGAATGGAAACAGGCAACTTCCTCGCTAAAAG
ACATGGTGTTATATTACAAAAACAATTCATTTCCATGCAAAGCTTGTTCA
TTTGGCTACTGCATGAAACTTTACTCAACGATGCAACACATTAACTCGGA
AGTAAACGAACAAGAGAACTCTAGAGTGAAAAAATTGAAGACGCAGCTTG
CCTACATGACACCTGAAAATTTTATTCGGCACTGTGACTTATTTTTCTGG
CACAGAAATCAAAAACGTATGCCATTCTAACACCGGGCATGATAATTTAC
GATAATGCTTGCAACTTGCATACTTATGCACTAAACCGAGACCCGCTATT
CTTCCAACACACAAAATTTGTCGTCGATCGTTTTCATTGGAGGAACCATA
CAGGTGTTTGTCTTGGTTACCAAATAATGGCAAAAAAGGAATCACCTGAC
GTTCCCTTCACAATTTTCAGAACAAGATTTCCTAAAGTTTCCCAAATCTA
CCAAAATTACGCAAGCGTGGTTTCTTTGAGATGGATTTCGACAAAACAAA
ACAAAAGGATTGTCGAAAGAACCACACTGGCCATCGAAATTTGACCTCCG
GAATATTTACCCTTTACTGTCAGCATGAAAGCATGGCAGTAGACTAGCGA
TCGACGATGCACCTTTCAGAAAACGTTTCAGGCGTTGGCTTGATGGGAAA
ATGAATCCTGCTGCCTCTCAAGCGTTCAGAAAAGACCTCCAGAACCTCAA
TAAACAGATCCACAAGGTCATTGAATGGGGTTACACCAAGTACCAAACTG
ACAGTCGCTTTCCAAAAGCTTTTAAGGACGTCCTTCGTTTGTTTGCATCT
GCTTCTCCCGTTTGTTCTTATTTCCCTCCTAACGAAGATTCGACGAAACT
TTCAATGAAAATGCTGGATGAAAACGTTAAAGCAGACAGTGAGACGATGC
GTCAGATCCAAGAAGTCTTCCCATTGTTCCACTCGCTGCTCTCCATCCTA
CCTTGTTGCCTTCCCGGTGTTTGGAAAGGGCTTCTGCTTTATCTCTATGA
CAAGGCAAATGACCCTTTTATCAACGCAAGTGTTATCAACACTCCGAAAC
ACCCGAAATCTGCTGAAATCAGCAGTTGTACCATGTTCAGTTATTATGAA
GTTATGATGGCTGTTCAGAAAGATAGTGGAGATTTGGAATTGAAGTCTTG
GTACGCATATCTGAAACTTCTTGACGTGTCATTTACCTCAAGTGCCGAAT
GCGATAAATGTGGCAAGGTCCCTAATATTGTTGTATGTGATGCCACCGGG
ATGGGTTTTCAAAAGAAGTTCCTGGCTTCTGGGCTGTGCGATACCGTACG
AAGCAAGCCAATGCAAAGATATTCTTGTCAACAAAGTGTGTCTTTCTTGT
CACAAAGAATTGCCATATGATGGATTGGACGATTCCATTATCAACATGGA
GAAGTTTCTCATCCATCACACGGTCCTCAGAGATTATATGTTTCATTTCC
TGAATGGAAACAGGCAACTTCCTCGCTAAAAGACATGGTGTTATATTACA
AAAACAATTCATTTCCATGCAAAGCTTGTTCATTTGGCTACTGCATGAAA
CTTTACTCAACGATGCAACACATTAACTCGGAAGTAAACGAACAAGAGAA
CTCTAGAGTGAAAAAATTGAAGACGCAGCTTGCCTACATGACACCTGAAA
ATTTTATTCGGCACTGTGACTTATTTTTCTGGCACAGAAATCAAAAACGT
ATGCCATTCTAACACCGGGCATGATAATTTACGATAATGCTTGCAACTTG
CATACTTATGCACTAAACCGAGACCCGCTATTCTTCCAACACACAAAATT
TGTCGTCGATCGTTTTCATTGGAGGAACCATACAGGTGTTTGTCTTGGTT
ACCAAATAATGGCAAAAAAGGAATCACCTGACGTTCCCTTCACAATTTTC
AGAACAAGATTTCCTAAAGTTTCCCAAATCTACCAAAATTACGCAAGCGT
GGTTTCTTTGAGATGGATTTCGACAAAACAAAACAAAAGGATTGTCGAAA
GAACCACACTGGCCATCGAAATTTGACCTCCGGAATATTTACCCTTTACT
GTCAGCATGAAAGCATGGCAGTAGACTAGCGATCGACGATGCACCTTTCA
GAAAACGTTTCAGGCGTTGGCTTGATGGGAAAATGAATCCTGCTGCCTCT
CAAGCGTTCAGAAAAGACCTCCAGAACCTCAATAAACAGATCCACAAGGT
CATTGAATGGGGTTACACCAAGTACCAAACTGACAGTCGCTTTCCAAAAG
CTTTTAAGGACGTCCTTCGTTTGTTTGCATCTGCTTCTCCCGTTTGTTCT
TATTTCCCTCCTAACGAAGATTCGACGAAACTTTCAATGAAAATGCTGGA
TGAAAACGTTAAAGCAGACAGTGAGACGATGCGTCAGATCCAAGAAGTCT
TCCCATTGTTCCACTCGCTGCTCTCCATCCTACCTTGTTGCCTTCCCGGT
GTTTGGAAAGGGCTTCTGCTTTATCTCTATGACAAGGCAAATGACCCTTT
TATCAACGCAAGTGTTATCAACACTCCGAAACACCCGAAATCTGCTGAAA
TCAGCAGTTGTACCATGTTCAGTTATTATGAAGTTATGATGGCTGTTCAG
AAAGATAGTGGAGATTTGGAATTGAAGTCTTGGTACGCATATCTGAAACT
TCTTGACGTGTCATTTACCTCAAGTGCCGAATGCGATAAATGTGGCAAGG
TCCCTAATATTGTTGTATGTGATGCCACCGGGATGGGTTTTCAAAAGAAG
TTCCTGGCTTCTGGGCTGTGCGATACCGTACGAAGCAAGCCAATGCAAAG
ATATTCTTGTCAACAAAGTGTGTCTTTCTTGTCACAAAGAATTGCCATAT
GATGGATTGGACGATTCCATTATCAACATGGAGAAGTTTCTCATCCATCA
CACGGTCCTCAGAGATTATATGTTTCATTTCCTGAATGGAAACAGGCAAC
TTCCTCGCTAAAAGACATGGTGTTATATTACAAAAACAATTCATTTCCAT
GCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036363XLOC_036363Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057648-exon-scaffold_296-1575043694:11942..12003TCONS_00057648-exon-scaffold_296-1575043694:11942..12003Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1575043694:11389..11527TCONS_00057648-exon-scaffold_296-1575043694:11389..11527Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1575043694:10637..10885TCONS_00057648-exon-scaffold_296-1575043694:10637..10885Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1575043694:9836..10333TCONS_00057648-exon-scaffold_296-1575043694:9836..10333Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1575043694:9475..9614TCONS_00057648-exon-scaffold_296-1575043694:9475..9614Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1575043694:9195..9278TCONS_00057648-exon-scaffold_296-1575043694:9195..9278Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1575043694:8820..8942TCONS_00057648-exon-scaffold_296-1575043694:8820..8942Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1575043694:8213..8537TCONS_00057648-exon-scaffold_296-1575043694:8213..8537Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:11942..12003TCONS_00057648-exon-scaffold_296-1510915933:11942..12003Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:11389..11527TCONS_00057648-exon-scaffold_296-1510915933:11389..11527Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:10637..10885TCONS_00057648-exon-scaffold_296-1510915933:10637..10885Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:9836..10333TCONS_00057648-exon-scaffold_296-1510915933:9836..10333Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:9475..9614TCONS_00057648-exon-scaffold_296-1510915933:9475..9614Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:9195..9278TCONS_00057648-exon-scaffold_296-1510915933:9195..9278Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:8820..8942TCONS_00057648-exon-scaffold_296-1510915933:8820..8942Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1510915933:8213..8537TCONS_00057648-exon-scaffold_296-1510915933:8213..8537Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:11942..12003TCONS_00057648-exon-scaffold_296-1491911889:11942..12003Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:11389..11527TCONS_00057648-exon-scaffold_296-1491911889:11389..11527Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:10637..10885TCONS_00057648-exon-scaffold_296-1491911889:10637..10885Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:9836..10333TCONS_00057648-exon-scaffold_296-1491911889:9836..10333Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:9475..9614TCONS_00057648-exon-scaffold_296-1491911889:9475..9614Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:9195..9278TCONS_00057648-exon-scaffold_296-1491911889:9195..9278Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:8820..8942TCONS_00057648-exon-scaffold_296-1491911889:8820..8942Clytia hemisphaericaexon
TCONS_00057648-exon-scaffold_296-1491911889:8213..8537TCONS_00057648-exon-scaffold_296-1491911889:8213..8537Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057648-proteinTCONS_00057648-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_296supercontigscaffold_296:8213..12003 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.402299	0.637495	0.227752	0.278524	1.3224	1.23254	1.26072	1.33159	1.03822	0.866081	2.42002	0.787041	1.25417	1.35457	1.6419	2.06845	2.45379	2.26355	0.694936	1.28658	1.89621	2.24111	1.06668	1.41534	0.566909	1.42149	0.965356	0.662306	0.865133	0.653967
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057648 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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