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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057911 ID=TCONS_00057911|Name=TCONS_00057911|organism=Clytia hemisphaerica|type=transcript|length=457bp
ACGTTTTTCAGCATCAGAAGGTCTGAAAACAATGTAATACTTTCTTTGAG
AGTCTATTAATGATGaacatttttggtaaaaatgtGTTATAAGGATTTCT
GAATGCTCTTCCACGATCCTTGAAACCTGAATCTCGCACATCCTGCGAAA
ACTGATAGACCGATATCCATAAATTCGTAGTTTGTTTGAACTGAATATAG
GTGTAATTAGAAATATCGTAAAGGAAAGTTATCCGAAGCGCGAGAGCTTT
AAGCTACATTCATCAGGCAGACAACAGACACGTTCACCTCTTGCATCTTG
AGACTTCCTGAATTAACTGAAGTTTATATAATGGAAAAAATAGACTATTT
ATTCTCATCCAGCGTCGATCAATCACGGTTTTGACTTTGATGGATACTGC
TAGCACGAAAACAAACGTTACAAGTAAATCAGCCAGGTCATTATGAAAGA
AACACCA Run BLAST on NCBI transcript from alignment at scaffold_302:152..1514+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057911 ID=TCONS_00057911|Name=TCONS_00057911|organism=Clytia hemisphaerica|type=transcript|length=1363bp|location=Sequence derived from alignment at scaffold_302:152..1514+ (Clytia hemisphaerica)
ACGTTTTTCAGCATCAGAAGGTCTGAAAACAATGTAATACTTTCTTTGAG
AGTCTATTAATGATGaacatttttggtaaaaatgtGTTATAAGGATTTCT
GAATGCTCTTCCACGATCCTTGAAACCTGAATCTCGCACATCCTGCGAAA
ACTGATAGACCGATATCCATAAATTCGTAGTTTGTTTGAACTGAATATAG
GTGTAATTAGAAATATCGTAAAGGAAAGTTATCCGAAGCGCGAGAGCTTT
AAGCTACATTCATCAGGCAGACAACAGACACGTTCACCTCTTGCATCTTG
AGACTTCCTGAATTAACTGAAGTTTATATAATGGAAAAAATAGACTATTT
ATTCTCATCCAGCGTCGATCAATCACGGTTTTGACTTTGATGGATACTGC
TAGCACGGTGAGTATATAATTGAGCATCTACTTTTTATATGATTAAAATT
ACTATATCCACAATTTTAGCAACAAAGAAAAGGCAACAGCATGAATTCAT
TCAGAACATTACATAGAATCGCAGTGCTGCGAAATTCTGCAACTTAAGCC
TTGTCAAATTCCACAACATTATCAAATTTGGAAGCCAGCTAAATTTGATA
CAGTGCTTGCCTTTTCCAAGAACGGGCACCACACACACCACAGGGTGCTG
CGCTGCCTCTGGATGAACGGAGTCTCAAAATCAATATTATAGTTTACTCC
AGGCACTAGttgacagtatagacctaactcttcacacaagaattacggga
aacgcatgtttggactttgtaccctatgctgcactcaagcacttaagcca
aagtcccgcaaaggcgggacaaaaatcagttttttgaagtttgcaaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATA
gagaagtaaaaaatacaacttttctatttttcctttttttttgcaaaagt
tctaggaatgaaaataaagggataatgataattgaatactatccattgat
tagggtggtcagaggaaatttcaaacttacttgcagaataccaaaccaac
tttaatggaaagccataaccatcagaagaaaaatgaggggtcatttaccg
taggtcggggaaacttcggacagattttcaagttttttctttatttctcc
tGGAATATGAAAAAAAGATCAACCAGACTTACTGTACATAACATTTGTGT
TATTGTCTTTCAGAAAACAAACGTTACAAGTAAATCAGCCAGGTCATTAT
GAAAGAAACACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057911-exon-scaffold_302-1491911889:152..558 | TCONS_00057911-exon-scaffold_302-1491911889:152..558 | Clytia hemisphaerica | exon |
| TCONS_00057911-exon-scaffold_302-1510915933:152..558 | TCONS_00057911-exon-scaffold_302-1510915933:152..558 | Clytia hemisphaerica | exon |
| TCONS_00057911-exon-scaffold_302-1575043694:152..558 | TCONS_00057911-exon-scaffold_302-1575043694:152..558 | Clytia hemisphaerica | exon |
| TCONS_00057911-exon-scaffold_302-1491911889:1465..1514 | TCONS_00057911-exon-scaffold_302-1491911889:1465..1514 | Clytia hemisphaerica | exon |
| TCONS_00057911-exon-scaffold_302-1510915933:1465..1514 | TCONS_00057911-exon-scaffold_302-1510915933:1465..1514 | Clytia hemisphaerica | exon |
| TCONS_00057911-exon-scaffold_302-1575043694:1465..1514 | TCONS_00057911-exon-scaffold_302-1575043694:1465..1514 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_302 | supercontig | scaffold_302:152..1514 + |
Blast
The following BLAST results are available for this feature:
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