TCONS_00057912 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057912
Unique NameTCONS_00057912
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057912 ID=TCONS_00057912|Name=TCONS_00057912|organism=Clytia hemisphaerica|type=transcript|length=3166bp
cggcacagtgacaagtcgttactagcaaccctgaccctacctaactgtta
gttaatcaattccaaacgacaaaacccccggaaaggtgactatcagcgat
ccgtggataaaaaaataaaaaaatgaaaaataaaaaaatgaaggtaactt
tgggtgatccgatataactttctccaaagaaaaacaaaattcgtACAGAT
CACAATTTCTTCGggAATGAATAGATGATTAAAgaaatcgatcaaaaaca
aaacagtacAATAAACACATGATAAATATATTTGGTTGGTCAACATGGGA
GGTACTGTTACCAAATGTTGGATGAGCCAGCCACCTTATGCTCGATACCA
TTCTAATTCCAAAGTCGAAAACGAGGTTGACCTGGAGAACGTTTTAGGAT
CTTTATTAGAAATGGATCCTTCTTTACAAGACCGTGAAGAAGGTGTTGGA
AAAATTAATTCATGGATTGAAGAGATTTCTTCAGAAATTCAAATGAGTGG
ACCACAACTAGAGATCAGTCGCTGGAAATGTATTAAATACTGGGAAGCcc
aacatgtgtctgatatttATGGAAACGGTAAAGAAGCCGTTAAATTAACT
GGGTCTTGCGTACGATTCTACTTTGAGAATTCACATAAAGAGGATGTTCT
TCCTAGACTTGTGATCGAACATTGCGGGAAAACGTTACAAATTAAAAGTC
GCAGACAGTCTAAAAGTAAATCTTCCAAAGCAGTCCCTATTTGGATGAAA
AATATAAGGGAGTTGAAATGGAACCCTTTCCACGGAGTGGTCCGACGTAG
GAATGATCATGGTGCATCTTTCATCAGCAACAATGACACCACGGAAATGT
TAACCACCAGGTATGGCTAGCTGGCATTAAATCTCCAttcttttttaaag
ttttctttccTATATAGATTCTATATCCTTTTTGATGTACATATTGTATA
TACGTCCTTTTCTGCTTTTTCCTAACTTGCTAGAAATGTATCATTTTGAA
TCAACTACATGTTTTTGGGCTAACTGCTATGGAATGTTTGTCTGAAGCAT
GTCTagttaattttgattttttctgttcgtgttttgtttttatttaaaag
atttgaAGGTTATAAAGTCGAGCTTACTATTTCTTAGCATGATATAGTTT
TGTAcgaatgttttcttttatttgtgtTTGCATGTTTAGATAACAAAGTA
CACACATACCGACCCATAAACACTCTCTCTACATGTCTCcgtcaaaacaa
acaaacaaacctaAGTCGTTTTTGTACATATATAGAATAGATTCTCATAG
ATTatcatttaaaatttatttttccctccaaaattataatttatatattt
gattctttttaactagaaaatttttaaaaaacctttCATCATCAAAAAGT
TTATGAAGTTAATTTGATCAGCATTTGAAATTGCTATAAAATAGTACTGT
TATTATAGAAAAATTTTGTACATaaacaataaagtttttttttgagattt
ttccaaTAACTTTTCTGTAGATTTTTCCAATATCTTTTCTGTAGATTTTT
CCAGACTTTAGATTTTTATCAACTGTAGCAGGAAGTATAAAAAGTGGTCC
GCCATAATCATCATTTGACTGAAATTAGTTGATTTATTTTCCACGTTGTG
TTTTAATTGTAGGTATTTTGTCCATGCTAATTACTCGAAACCTTTAAGAT
ACTTATAGAAGCATAACTTTCGATCAGGAAAGATAAGATCCTGTAATTAA
GAATCTTTGAATAATAAAAAGAATGTTAAGCCGTTAGGAtatttgttcaa
tttttcaatcaaagagACGCCTGTTGGATTTCCTATGTTGTGCATTTGTA
GATTTTGTGgccttttgaaattttatcacTCCATCTAGAAGCACGACAAA
ACAAACcatgttttgaaaaacaattttaaaactgATTGTTAAGCACGCTT
AAATAGTCTGTATTGTCATTGTCTACGATTTTTATATATTTCGAAGAGGT
TCATTTATATCCCCTGCTTTGAtgatctttcaatttttctttagacAAAC
TCTTAAACCCTGCAAAGATTCCCTTCAAAAGGATTCCTACATTTCCAAGC
TGCGAAATCCATGTTTGCGTTTTGTTTTATGAATGCTGAAAATACTTCGG
CTGCAATATTTCGAACAGGCATAANCGTCTCTATTGTCATTGTCTACGAT
TTTTATATATTTCGAAGAGGTTCATTTATATCCCCTGCTTTGAtgatctt
tcaatttttctttagacAAATTCTTAAATCCTGCAAAGATTCCCTTCAAA
AGGATTCCTACATTTCCAAGCTTCGAAATCCATGTTTGCGTTTTGTTCTA
TGAATGCTGAAAATACTTCGGCTGCAATATTTCGAACTGGCATAAAATGC
ATTTAATACATTCTCTAGGTAGAGCAGTCCCGACAGTCCATACGACTTGT
TTTTTGATTGACTTATCGACTTTCTGAGCTGTTGTTAGTATGAGCACGTA
CTTACCTTAAAGAGAATGACGAAAGCTAAATAGGGGGTCCTGAGATTTGT
TCCAGTTCCATGGTATATTCGCTGACGTCAGCACGGGTTTTAATTGGTTT
AAAAGATTCGaaagagaaaacgaaagtttttttgagttatgaacgtttat
tttcgaacgtttttctGACGTTAAGACATAATAGCGTCTTCTTTTTCGAA
CTCCAAACCAGaattgacgtcacaaaaacaaaaaaaaacaatattaagCC
TTTTGTCGTTCTCTTTAAATGAATTAAATTTACCTTGAATTTATTTCACg
atttgtttattcttgccaaaTCACTCTAGAATCACGAAAAGAAAAGGTGG
AGGTATAAATATGTTGATTCTCATTCTCAACTCGCGAAAAATTCGTTACC
TAAATAAAGTACAACAAAGTCGATACTGTCGTCCTTGActatttcatcaa
aaatttcatcctCGATCATGTTATCTATTTTGAAGTGCCATCCTTCTGTA
AAAAAATGTAATCCGTCGGAAAAGGTTTCATGATTATTTAGATTTATAGT
CTATTTTAGAAAATTATAGATGCTTATATATATTGAAAAAGATCATTTAC
Gttattttcatagatttttccaaatatttttagtttttttgtgttatata
aattgaaataatttct
Run BLAST on NCBI

protein sequence of TCONS_00057912-protein

>TCONS_00057912-protein ID=TCONS_00057912-protein|Name=TCONS_00057912-protein|organism=Clytia hemisphaerica|type=polypeptide|length=191bp
MGGTVTKCWMSQPPYARYHSNSKVENEVDLENVLGSLLEMDPSLQDREEG
VGKINSWIEEISSEIQMSGPQLEISRWKCIKYWEAQHVSDIYGNGKEAVK
LTGSCVRFYFENSHKEDVLPRLVIEHCGKTLQIKSRRQSKSKSSKAVPIW
MKNIRELKWNPFHGVVRRRNDHGASFISNNDTTEMLTTRYG
Run BLAST on NCBI

transcript from alignment at scaffold_302:24557..35773+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057912 ID=TCONS_00057912|Name=TCONS_00057912|organism=Clytia hemisphaerica|type=transcript|length=11217bp|location=Sequence derived from alignment at scaffold_302:24557..35773+ (Clytia hemisphaerica)
cggcacagtgacaagtcgttactagcaaccctgaccctacctaactgtta gttaatcaattccaaacgacaaaacccccggaaaggtgactatcagcgat ccgtggataaaaaaataaaaaaatgaaaaataaaaaaatgaaggtaactt tgggtgatccgatataactttctccaaagaaaaacaaaattcgtACAGAT CACAATTTCTTCGgggtaactttttattttgtttgacagtttgatgtttt tactttttttaaatattcctttttttatttaaagattGAATAATAAGCAC GTGTTTTTGAAGATGGTGAATAGAGATCCATTTTAGCTGTTTAGTGAATT GTgacacagcattttttgagttttgtgtAGTAGAGAGCAGAGGTCAGTAT TGTTATttgtttgtgtttgtttttataagtAATAAGATTCCctcactaag attcttgtcattTTTCCTGGGATAACTGGcattggaaagggtttgttttg aaagatagggaaaatcttgtgtttacttacTTTATATAGAAAAGTGCGCC TAACTGCCAGTACTTAAGTTAAGTCACACTTTAGCATCCCTGCCGAAATG CTGTATAGAAAGATTAGTGCTacaaaagcgctatatcgttttcttgactc gcaagcaaagAAATGCgctgcaaaacttctaaagggattcatgaaaaaat aacccagcgctttttaaccagacggtgtcaatcgaacgaatcaaacgccg catcaatcgaacgcaattgaacgcaatcgaataattgcaattcgattgtc gaacgcaatcgaatcgcaatcgaatattacccaggatttgatgttcgatt gcTGCGATTACGTTGGATTGTAtgcgattacgttcgattgtattcgatta ctacgttcgattgattcaattgtattagattttattcgctttagtatggt acttaagcgctcggccgcccatgctaagaagctctaacagagtgatccaa tttaatttaatcacaatcaaactcatcgagcataatcgtaatcgaacgga atcgaagattaatccaatgtaattgacaatcaatcgaaccaatcgaacat agtcaacaatcaatcgaaccaatctaaccttactcaaacgcaatggaaca caatcgaatattacccaggaatcggccgttcgattgagattcgattacgc tcgaaaatcgaatcgcaattattcgatcaaattcgattacgtttgattgg ttcgattgcaatttttgttcgaagttgttcgaatgacaccgtctggtttt aatgaaattaagtttttcaaaaactgtgagaaattgcctaaaatttgagt cGTAGATGAAAATGTTTGAGCCAAGCCGATATTAGCTGGGAGACCCAACT TCTCTGTCtatgtggtttcaaaaaaatatcaaagtatagacagtagtagc cgggaattatacaagatgcaagaaTTAATCGCAGAATTTNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNGGATTTTAACAGGATAGAAATATGTTTGTacagagtatgg tctccagactaAGCCGATATCTGTGTTCGGAGACTTGGGCAAATTCGTGC GATCACATTTACACGTTTCTCGTCGCAAAGATTTGTTCCTTTTGCGGTGT GAAAGCCTACCTGTGAGAGTATCCGACTATCCGATTTTTTTGCTAGAAAa gttaccgtgagtggtcctaaatccgacagccctgcctaaatccgatgggg tctttcgaagatacaaactaaaataaaaacaaatctttcgcTGTGATGCA ATCTGAACCAATTaaatcaaataataataattgcttcttatacaaaacat aattttttattacaaaattgttaacgttttaaacacgaacAACAGAATCA GAATAATAggggtaattatttttacaagtcgcacttttttgatcacatta taattgacatcttgacattatagttatcttgttagatgttttgtttcgaa agttcttgcaatagtttattgttgaACTTGGaaagggaatgtttgtaaac atagaattttttttcatagcagttatttggggggtcggatttaggcaggg ctgtcggatttaggaccactcacagtaCAAAGGAATCTTTAGTGATGAAA TTGGAATTATACAAAAGGAAGACGTATATACATGCCAACAGCAGACCCAA TAGGCTGATTTGGCAAAATCCATTAAGGCACTATCTTCAACCAAATCTCA CGCAAGGcctagcgactccagaagtcacaAAACTTTTGCTGACATCAagc aaaatgtttaatttttcagtgaactttgaacccttctaactttttttcta tgtatacTAAAGCGTTCCAGTTTTAATAAAAGAAAGCCCCTGATCTTAGC TTTCTAACAGTATATTACACTCAGGCGAGTTACGGTGTGTCCAACTCCAA TGCAAAACAATAGCACTTATTTTAGGGTGCTCatttatacatcaaaagaa gcgtattccAACGTACATTAACAAAATACACCTCATCAGAAATTCTACAA AAACAATTGCGCTAAAATGGATCCGTTGTaattgggaggtaaacataaat ggtAGCGCGAGTAGCGCTAAAAGTTCCCGCGTAAAACAAGAACTCATTTG CTTATATCTGGTTTGTTTATATGTTcttaaaaatacactgaatttgaaaa aaaaagataaaaaaaaagctttcaagatgctagcagaagctataagaaag agaaaaacaacaacttcggtggttcttcagttgatttggaggctcttttg gcatcaatattttggatgttttgtaaggctttttgcctgaaaaccgcaat atcgtgctttgtttacctcccaaaaagtgttgcgtagcaacaacgcgagg aggtggaatttccgatgaggtgtacagccctgtgaatccaggtcggcatt cggcaatGCCGACTTGAAAGCTGACGTAACTTGaattgtgttatcatttg ataacacatgataatcgagcttcattccattctctttataaaacataaaa caattATAGAGCAGCTGAATTTGTTAGTTCGTTAATTTTCTTcctatttt gtctttgtcgacctaaacaagctacttaggacggctttcatggctggaac ccccccTGGCCGcaggggggggctaaaaggtcgagcagcgattggtacct gattttagcctgtggctaggggggactaattatgttaggggtcacctaaa ttttttcagatggacctgggggctacattctatgtttggtgattgAATTA TAAGCAGCCTACCAGACCATAGGTTGGCATTCCTCaacttatattttaat ctaagcaatgctcaaaaactgacaatttggtatctaatatattatctgTA GTGCCGTAGCatgggggggggcaaggggaACTATAACcctaataattttt tcaaaaatggctattttgcaaagtttttctttttgaatttgtcataattg tcttataagtgcatgctttgagtgcattttcaagcaatctagagctcaaa tttccaaaattttcccccgagggccaaaccatggttggccctagcctggg aatccatgctatgatttcttctttgataaactgatggcgaaatgtatagc atggtatgggttgagagtttgaatttctcagatcNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNtgatggcgaaatgtatagcatggtatgggctgagagtttgaatttctc agatcctaataacggttgaaaacatagccaatcaaattttgttattcttt tacttgtcacactttcttagagaaagcgcaactttcgaaatttggttttt atcttagtaagtgaggacagcgctaaattcgtatttcccactgtaaaaaa tgtgagtccaatattggactcataGCTCGAACctgtcttgtgtacatcaa attataaaaaaaacacacgacgggtctcctgtctaggttggccctcgcgg tatcactaaacttcagccccctaatatgaaaatgcttcctacggcactga tctgtaaaaattctttaatcatgttgcatttacttagataaaaaatctgt cgGCAAGCAATCTGCACCCTGACTTGATAATCTGGCAGTAACCTTCAGTA CTTAACTTATCTCTAatttcttagggcatttattctatttagcaataagc taaactaactgttgtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggctttgccgacctaaaatg acctctaggtcggcaaaatttAGGTTTTGGTCGGCACTCAAGTGCCGAta tgattttgtctgaattcacaGGGCTGGGTGTATTGCTGTGttggaattat tttttgcaACCAAAAAAAGTTATGGTTTTTGACGTCATAACGgcgacgtc ataaaaattgaatatctcgagaaaaactcatcaaaatcacttcaaatttt caccaaaagttTAAATCGATAAAGTTTATTGATACTATTTTTcggtgaaa atttgaattgattttgattagtatttcttgagatattcaattttaaattt ttatgacgtcatcgttatGACGTCAAAAACCATGTTTTTGGGTAATTATT CCAACACAGCAATTTTGTTAATGTACGTTggaatacgcttcttttgatgt atggTTTATGAATGATTACCCTAAAATGAGTGCTATTGGTTTGCATTGGA GTTGGACACGCCATAACTTGCCAGAGCACTGTGACGACAAACTGGTAAAT TGTAAATTGCCAACgtttttgcaacatttcaaaattgaaatgggagaaaa aaatttccaacttttaaCGAATaaatgtttctggaaatggaggaaaacat agttgaaggctgaaactttgaatgtttatcagaaaaatggtgaggaattc aaaaatcaaattcgctaattttagttctttcatcATAAACCTATTCTTCT CTAAATGTGATAAAAATACTAGAATGTAAAATAACATGTTATTTTCTAGA CATTTTGATGTCGCTATGATCATAATTACTAGCAAAAATGAAagtgtaca atttttttccctTCATAAACTAAAACTGAGTGAtctcaaaataaaaagag aAGTAATTATATCTAATAATTGTATGATTCCACTGTGTGATTCTCTCTTT TACAAAAGTTatcttttttaaacaaagaGAAGATCGTTATTCTGAATGAG TTGAATATCAGACCCTAAATCAAAGTCAAGGTATGAATGGAACCTCTGAA GTTTTTAACTTCTCAACAATAGTATGAACTTAAATATAAATGATccagtt cttaaaaaaaacagaagCAATGTTCTCAGAGAAGGATCTAAATATCAGCT TAGATTAGGACTTAGGACTTTGTCTCTGTAGAGCTCTTTGTTTCATATAG TTAAGTTCATTTTGGTTGAATCCTGTGAGCTGATTAGAAATGATTTCAAA GCTTGTTATCGATTTTTTCTTACAATTGACATTGTATATACTAACGGATT ACTGAGAATTATTTACTCGAGACCCCAACATTTCAAGTTGGTATGTACAA GCACTAAGAACGCCTCACATAGCCAACAATCTACAAagtctcaaatgaga aaaaccTTCAGCTACTTAGGAAACAGTACTGGTTTGTTAGACTTACCtca tttaaaagaaattttgagaaatgttGGGAAGGCTCCTTAGAAAATCATTT CTCAATTATTCTTTTGTCTAGAAATTTGATTAAACTGTCTGAAAATTTGC AATATAGACAACAGACCTCCTGAAATTCATGAAAATCTAGTCACTTTACA AGGGATTTACAAGGCTACTGACAATACCAGGTTTACACAGAAtgtaaatt tggatttttttttcattctcccGATGGAAAACAGAAACAGTACTTttcaa tgatttaaaaaaaaatatggtGTAGCCAGGGCCTTATTTTTGACTCACCA GCCTAGAAGTTTGGCACCTTCTTTTGGGACATGTAGGGCTAAACTAGGTT GAGTGAaagacttcaaattttcaactttttttaaacgTTACTTTGTTAAA GGTGAACAccttttggcaaaaaaaaagttCCTAAGGATATACTCAACTGC TGAGTAAATAAGCCTTCACTTGtcaatcaaaatgtttttttttaagtcaa TCCTTTTAtcccaaacaaacaaacttactTTTGAATATTTGGAACTTTGC AAAAAAAGTTATATCAGgaacatttttctattttctaatttggaattgaa attAAATCTTATCTCAAACTCTCCCCTAAAAAGTTATTAAACTTTCatct ttttgttttccttttgtATTATTACTTTCCCCCTTTATTTGATTAAAAAT GAAGTCTGTTTTGGTCTTGTTCTACGTTTTTTAGAAGAAGatacaaatgt tataatttgtGAAAAAGGGAAATGTAGTAATAATAGAGTCCTCAAGCTGC TTCTTTTCGCTTTGAACTCATATCTCCTGTCTATCTGAACCTTGTTTTAT CATTTGTGTTGATTAGAATCTATTTTGGCACTTCTTTTTGGAACAGGAAA TGTAATTAATAATTGACGTTTGAACTCCTTTTATGAAGTACATGTCTAAA CTTTTATAATCAGTTAAGATAATCGAAAGGATCTAAGTTTTACTGCTAGT ACACATCATTTCTGAAACATCTTGGCTTAAAAATCTTTCTTAGTTATTTT CAATGNAGTTAAGATAATCGAAAGGCTCCAAGTTTTACTGCTAGTACACA TCATTTCTGAAACATCTTGGCTTAAAAATCTTTCTTAGTTATTTTCAATG ATACTTTTGCCACCCTTTTGCTATCGGCCTGTAGATTTCCTTTAAATCGA GGGTCGAACTTGATAATGACAGGATGTCAATTAACTCAACCTACATTATC ATCATAATTGCTTTTCATTGCTTTAAAATATTGATTGGTTTTGTTAAATG AAAATTGATCTCAATGTCTTTAATGTAAGGTTTTGTAATGATTGTTTTTA TGATGTATAACATTGTGTAGATTGTAAGATTCGTGCATAAATTTATGTGA CGTGGTTTTTAGATTCTTTCTGTATCATACTTCAGATTTTCAAATCAACA AATCCCTTTACATACTTTATAATATTTGTCTGTAAATACTAATTGCTTGA TATTTTACCGTTGTAGAATGAATAGATGATTAAAgaaatcgatcaaaaac aaaacagtacAATAAACACATGATAAATATATTTGGTTGGTCAACATGGG AGGTACTGTTACCAAATGTTGGATGAGCCAGCCACCTTATGCTCGATACC ATTCTAATTCCAAAGTCGAAAACGAGGTTGACCTGGAGAACGTTTTAGGA TCTTTATTAGAAATGGATCCTTCTTTACAAGACCGTGAAGAAGGTGTTGG AAAAATTAATTCATGGATTGAAGAGATTTCTTCAGAAATTCAAATGAGTG GACCACAACTAGAGATCAGTCGCTGGAAATGTATTAAATACTGGGAAGCc caacatgtgtctgatatttATGGAAACGGTAAAGAAGCCGTTAAATTAAC TGGGTCTTGCGTACGATTCTACTTTGAGAATTCACATAAAGAGGATGTTC TTCCTAGACTTGTGATCGAACATTGCGGGAAAACGTTACAAATTAAAAGT CGCAGACAGTCTAAAAGTAAATCTTCCAAAGCAGTCCCTATTTGGATGAA AAATATAAGGGAGTTGAAATGGAACCCTTTCCACGGAGTGGTCCGACGTA GGAATGATCATGGTGCATCTTTCATCAGCAACAATGACACCACGGAAATG TTAACCACCAGGTATGGCTAGCTGGCATTAAATCTCCAttcttttttaaa gttttctttccTATATAGATTCTATATCCTTTTTGATGTACATATTGTAT ATACGTCCTTTTCTGCTTTTTCCTAACTTGCTAGAAATGTATCATTTTGA ATCAACTACATGTTTTTGGGCTAACTGCTATGGAATGTTTGTCTGAAGCA TGTCTagttaattttgattttttctgttcgtgttttgtttttatttaaaa gatttgaAGGTTATAAAGTCGAGCTTACTATTTCTTAGCATGATATAGTT TTGTAcgaatgttttcttttatttgtgtTTGCATGTTTAGATAACAAAGT ACACACATACCGACCCATAAACACTCTCTCTACATGTCTCcgtcaaaaca aacaaacaaacctaAGTCGTTTTTGTACATATATAGAATAGATTCTCATA GATTatcatttaaaatttatttttccctccaaaattataatttatatatt tgattctttttaactagaaaatttttaaaaaacctttCATCATCAAAAAG TTTATGAAGTTAATTTGATCAGCATTTGAAATTGCTATAAAATAGTACTG TTATTATAGAAAAATTTTGTACATaaacaataaagtttttttttgagatt tttccaaTAACTTTTCTGTAGATTTTTCCAATATCTTTTCTGTAGATTTT TCCAGACTTTAGATTTTTATCAACTGTAGCAGGAAGTATAAAAAGTGGTC CGCCATAATCATCATTTGACTGAAATTAGTTGATTTATTTTCCACGTTGT GTTTTAATTGTAGGTATTTTGTCCATGCTAATTACTCGAAACCTTTAAGA TACTTATAGAAGCATAACTTTCGATCAGGAAAGATAAGATCCTGTAATTA AGAATCTTTGAATAATAAAAAGAATGTTAAGCCGTTAGGAtatttgttca atttttcaatcaaagagACGCCTGTTGGATTTCCTATGTTGTGCATTTGT AGATTTTGTGgccttttgaaattttatcacTCCATCTAGAAGCACGACAA AACAAACcatgttttgaaaaacaattttaaaactgATTGTTAAGCACGCT TAAATAGTCTGTATTGTCATTGTCTACGATTTTTATATATTTCGAAGAGG TTCATTTATATCCCCTGCTTTGAtgatctttcaatttttctttagacAAA CTCTTAAACCCTGCAAAGATTCCCTTCAAAAGGATTCCTACATTTCCAAG CTGCGAAATCCATGTTTGCGTTTTGTTTTATGAATGCTGAAAATACTTCG GCTGCAATATTTCGAACAGGCATAANCGTCTCTATTGTCATTGTCTACGA TTTTTATATATTTCGAAGAGGTTCATTTATATCCCCTGCTTTGAtgatct ttcaatttttctttagacAAATTCTTAAATCCTGCAAAGATTCCCTTCAA AAGGATTCCTACATTTCCAAGCTTCGAAATCCATGTTTGCGTTTTGTTCT ATGAATGCTGAAAATACTTCGGCTGCAATATTTCGAACTGGCATAAAATG CATTTAATACATTCTCTAGGTAGAGCAGTCCCGACAGTCCATACGACTTG TTTTTTGATTGACTTATCGACTTTCTGAGCTGTTGTTAGTATGAGCACGT ACTTACCTTAAAGAGAATGACGAAAGCTAAATAGGGGGTCCTGAGATTTG TTCCAGTTCCATGGTATATTCGCTGACGTCAGCACGGGTTTTAATTGGTT TAAAAGATTCGaaagagaaaacgaaagtttttttgagttatgaacgttta ttttcgaacgtttttctGACGTTAAGACATAATAGCGTCTTCTTTTTCGA ACTCCAAACCAGaattgacgtcacaaaaacaaaaaaaaacaatattaagC CTTTTGTCGTTCTCTTTAAATGAATTAAATTTACCTTGAATTTATTTCAC gatttgtttattcttgccaaaTCACTCTAGAATCACGAAAAGAAAAGGTG GAGGTATAAATATGTTGATTCTCATTCTCAACTCGCGAAAAATTCGTTAC CTAAATAAAGTACAACAAAGTCGATACTGTCGTCCTTGActatttcatca aaaatttcatcctCGATCATGTTATCTATTTTGAAGTGCCATCCTTCTGT AAAAAAATGTAATCCGTCGGAAAAGGTTTCATGATTATTTAGATTTATAG TCTATTTTAGAAAATTATAGATGCTTATATATATTGAAAAAGATCATTTA CGttattttcatagatttttccaaatatttttagtttttttgtgttatat aaattgaaataatttct

Coding sequence (CDS) from alignment at scaffold_302:24557..35773+

>TCONS_00057912 ID=TCONS_00057912|Name=TCONS_00057912|organism=Clytia hemisphaerica|type=CDS|length=576bp|location=Sequence derived from alignment at scaffold_302:24557..35773+ (Clytia hemisphaerica)
ATGGGAGGTACTGTTACCAAATGTTGGATGAGCCAGCCACCTTATGCTCG
ATACCATTCTAATTCCAAAGTCGAAAACGAGGTTGACCTGGAGAACGTTT
TAGGATCTTTATTAGAAATGGATCCTTCTTTACAAGACCGTGAAGAAGGT
GTTGGAAAAATTAATTCATGGATTGAAGAGATTTCTTCAGAAATTCAAAT
GAGTGGACCACAACTAGAGATCAGTCGCTGGAAATGTATTAAATACTGGG
AAGCccaacatgtgtctgatatttATGGAAACGGTAAAGAAGCCGTTAAA
TTAACTGGGTCTTGCGTACGATTCTACTTTGAGAATTCACATAAAGAGGA
TGTTCTTCCTAGACTTGTGATCGAACATTGCGGGAAAACGTTACAAATTA
AAAGTCGCAGACAGTCTAAAAGTAAATCTTCCAAAGCAGTCCCTATTTGG
ATGAAAAATATAAGGGAGTTGAAATGGAACCCTTTCCACGGAGTGGTCCG
ACGTAGGAATGATCATGGTGCATCTTTCATCAGCAACAATGACACCACGG
AAATGTTAACCACCAGGTATGGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036519XLOC_036519Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057912-proteinTCONS_00057912-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057912-exon-scaffold_302-1491911889:24557..24771TCONS_00057912-exon-scaffold_302-1491911889:24557..24771Clytia hemisphaericaexon
TCONS_00057912-exon-scaffold_302-1510915933:24557..24771TCONS_00057912-exon-scaffold_302-1510915933:24557..24771Clytia hemisphaericaexon
TCONS_00057912-exon-scaffold_302-1575043694:24557..24771TCONS_00057912-exon-scaffold_302-1575043694:24557..24771Clytia hemisphaericaexon
TCONS_00057912-exon-scaffold_302-1491911889:32823..35773TCONS_00057912-exon-scaffold_302-1491911889:32823..35773Clytia hemisphaericaexon
TCONS_00057912-exon-scaffold_302-1510915933:32823..35773TCONS_00057912-exon-scaffold_302-1510915933:32823..35773Clytia hemisphaericaexon
TCONS_00057912-exon-scaffold_302-1575043694:32823..35773TCONS_00057912-exon-scaffold_302-1575043694:32823..35773Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:24557..35773 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.78301 4.83551 1.50103 1.96206 9.21209 7.67235 7.81198 8.46682 4.39231 5.04098 4.93464 2.86248 8.51809 6.14123 5.1393 4.27041 7.81913 7.54185 6.51506 6.47261 6.36995 7.13265 4.59742 6.10941 8.53423 9.87075 11.6214 7.7451 2.34589 2.13906
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057912 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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