TCONS_00057951 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057951
Unique NameTCONS_00057951
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1517

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057951 ID=TCONS_00057951|Name=TCONS_00057951|organism=Clytia hemisphaerica|type=transcript|length=1517bp
TTCTAAAAGCCATCACtggaaacatcaaaacaaagatcgcAGAAAGCGAA
GGTGGAGGTTCATTTTCAACTTGCTTGTGTGTCAGCTAGACTTCCACCAG
ACGACACCATACCCTCTGTTTTGTGACTCTTCCTCGGTGAATTAAGTACC
TTGAAAGAACAGAGACATGTAACTTACAGACAGTATAAATTCATAGACCA
CTACCAAAGACAAATAAAGATGAGAATATTCATCAGTTGAAGGCATCAAG
TAAAGATGTCAAGAGAAAATTgaATGTCAACACTGTCTCATCAGTTAAGA
AGAATGTCTTCATCAGGCTCAATAACAAATCTTGATCTTAACTCCAATAC
CGAGAATGACACATCACCATTACGTCAAACTCAAACAGTCAAAACCAAAT
ACTATTTCTTTAAAGTTTTACAATTTCTTCATTTTGGCGTTGTCATGTTT
TACTTGTGGGCAGGATTGGTTGAGTTCATTAATAATCCACCATTTTTTGA
TGCATATGGTGATGCTCTCACAAATATGAATAAACTACCAGAGGGAATAT
TTGCGAATGACCCAAGGCAAAGACAAGCAGGAAATTTGAGATTGATGGAT
CTTCCAATCCTTCTCATGTTGCTTGCGTATGCTGGCGTCGCAACATGGCT
CAAATATCAAGGGCTGGCTTGGTTACTAACTTTCTCTATAACCATTGCTT
TTATTTTCTTCTGGGTCGTTAACTTTTGGGCCCAAGGGGCCTTCGATTGG
AGATATTACTCATCACGGATGTCAGGGTTGGAGCTGCAGGTTTCTGCATT
AGCGTTGAGTTGCACTAACATATTAATGGTTATGTTTTATAAACGAAGAC
GTCTTCCTTTCAAGTTTAAGTCAAGCCTTCCAATCGAACGTCTTGGCTTT
TTACATCTCTCCTTCAACTTTTGTGCAATCTTCCTTATCATGTTCACGTC
CATGTTGATGTGGTTCACTAAAATGTATATTTCATGGGCGTGTTTCAAAG
ATCAGAATGAGTTACTTGGACTTTGTCAAGTGACGAATCAGGTACAATGC
TATCCGTGTCAAACATGCACAGAAGAAGGAATCAATAAATGTTACAAACG
AGAAATTGACGAAACGCTCTTCTCGTGCAATACAAAATATCCAAAAGAAG
ctaaaaagGGAGCATTTTGCATCTTCAATTATAACATGAGTACAGTGGAA
TTCTTAACAATTTTCGCCTATATTGGAGGACTGTGTGTTTTCCTGAGTAA
CTTTATCAAATTGGTTGGACATTACATATTACGTGTGTTATTCATGTTTT
ACGAATGGTGTTTAAATCGATGTAATCGAACCAGTCGGATGATTGATAAC
CACCGACAACGATTAGTACAACGTAGACAGTTAAGAGAACACAGGATGAA
TTGCGATCGGCAATTATTAACCGATTCTATATCGCCCATACAGTCACCTA
GAGAACTTCATAATCCAGTCGGTTCGCCAGGTGGCTCCACTAACGCATCA
GGTGGATTAAGTCCTCG
Run BLAST on NCBI

protein sequence of TCONS_00057951-protein

>TCONS_00057951-protein ID=TCONS_00057951-protein|Name=TCONS_00057951-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MSTLSHQLRRMSSSGSITNLDLNSNTENDTSPLRQTQTVKTKYYFFKVLQ
FLHFGVVMFYLWAGLVEFINNPPFFDAYGDALTNMNKLPEGIFANDPRQR
QAGNLRLMDLPILLMLLAYAGVATWLKYQGLAWLLTFSITIAFIFFWVVN
FWAQGAFDWRYYSSRMSGLELQVSALALSCTNILMVMFYKRRRLPFKFKS
SLPIERLGFLHLSFNFCAIFLIMFTSMLMWFTKMYISWACFKDQNELLGL
CQVTNQVQCYPCQTCTEEGINKCYKREIDETLFSCNTKYPKEAKKGAFCI
FNYNMSTVEFLTIFAYIGGLCVFLSNFIKLVGHYILRVLFMFYEWCLNRC
NRTSRMIDNHRQRLVQRRQLREHRMNCDRQLLTDSISPIQSPRELHNPVG
SPGGSTNASGGLSP
Run BLAST on NCBI

transcript from alignment at scaffold_302:79109..83747-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057951 ID=TCONS_00057951|Name=TCONS_00057951|organism=Clytia hemisphaerica|type=transcript|length=4639bp|location=Sequence derived from alignment at scaffold_302:79109..83747- (Clytia hemisphaerica)
TTCTAAAAGCCATCACTGGAAACATCAAAACAAAGATCGCAGAAAGCGAA
GGTGGAGGTTCATTTTCAACTTGCTTGTGTGTCAGCTAGACTTCCACCAG
ACGACACCATACCCTCTGTTTTGTGACTCTTCCTCGGTGAATTAAGTACC
TTGAAAGAACAGAGACATGTAACTTACAGACAGTATAAATTCATAGACCA
CTACCAAAGGTAAGAAATGACAATATGCGTAAAACTTAAAACTGCTAAAA
ACAGAAAAATATGGTGTCGTCGTGCATGTGAGCGAGAGAAGTATTTACTT
TTACTTGTGAACTGAACCCTATACACCCATCAACCTTTAGTTCAATTAGT
TGTCTGTACACAGACCCAGTATCTATGGCTGATTTCAAAATCGATTGCTG
TGGAGGGTTTGTTGTCATTGTCTTTTCTCATTTGAGATTTTTTAAACCAA
TCTCTTGGCTGGCTGGCGGCTGGCTGGCGGCCGGCTGGGATGCTGATGGA
GTGTTGGTGGTGAGGAGAAGGGAGGCAATGAAAACTTTCTTTCATTTTTA
TTTTGCCAGACAAATAAAGATGAGAATATTCATCAGTTGAAGGCATCAAG
TAAAGATGTCAAGAGAAAATTGTAAATAAAGCATCTTTTTTAAAGAAAAG
ACAATAATCTAACTGATTAAAAACCATTCATTTTGTTAGCAATGCAACTT
TTTTATTCAACAAGTAACTTTTATTATTGCTGTGTTGCAAACGTATCCTG
TGGTACCACAGCTACAAAATTCGAAAAAATCAATATTTGCTATGGGGTCA
GAGAATTTTTTTCTGAGTTTTCTGTATGGCAGCACCCATTTTTAGAAATC
AGTTAAAAAATGACTTTCTAGGGTGCTTACATTCTTTATTGTACAACCTG
GTGATCTCGATAGAAAGGAAAGAATTATATTTGGCTGTCTCTCAATTTCT
ATAACCTCACTCTGATGATGTGACAGAGAGGGGTAAAATGTTTTTGGATG
ATAAAAACTGAAACGGTTATTTCTTCATACTTTTTTTTATTTAAAGGAAT
GTCAACACTGTCTCATCAGTTAAGAAGAATGTCTTCATCAGGCTCAATAA
CAAATCTTGATCTTAACTCCAATACCGAGAATGACACATCACCATTACGT
CAAACTCAAACAGTCAAAACCAAATACTATTTCTTTAAAGTTTTACAATT
TCTTCATTTTGGCGTTGTCATGTTTTACTTGTGGGCAGGATTGGTTGAGT
TCATTAATAATCCACCATTTTTTGATGCATATGGTGATGCTCTCACAAAT
ATGAATAAACTACCAGAGGGAATATTTGCGGTAAGAAATCATTTTCAAAT
TATATATGAAATAAGTTAATTTTTGGATTTTTATTATGAAATCATTTTGA
TGTAAATAAATTGGTACTGTATCTTTTTATTTTGCTTTATCTTTAGAATG
ACCCAAGGCAAAGACAAGCAGTAAGTAAAATTAAAATTACGATATAGAAC
TTCTATAAAAATTTGAAAGGTAACTTTATAGTTGTTCCTTCTTTACTTTG
ACCTTCTTTTTATTATGTAATTTTTTAAAGAGCATTATGTCTGGTTTTTA
GGGAAATTTGAGATTGATGGATCTTCCAATCCTTCTCATGTTGCTTGTAA
GTTTCCATCGGATTTTATCAAATTCAATCTATGATATGATTTCGTAATTT
AGCGATGACATATGAAAAGTGTTTTAATCATTGTGCTTGAACATTTTTTT
CATGAGCAATTTTTCTAACTCAGCAGCGCTGAAAAATCCATACAATGTAT
CTCTAGGACTTTTTTATATTTTAATTTATTCGTATAAACTTGCATAGTAC
CCCAGCTATTTAAATTTGATTATGATTGTACATCCTTGTATATAATGCGC
GTTTGCAATAAAAGGAAATGAAAATTAAGTAATTAACCACAAAATGACTG
CGCTGTTGTTATTCTTTGTATTTTGTTCATAGGCGTATGCTGGCGTCGCA
ACATGGCTCAAATATCAAGGGCTGGCTTGGTTACTAACTTTCTCTATAAC
CATTGCTTTTATTTTCTTCTGGGTCGTTAACTTTTGGGCCCAAGGGGCCT
TCGATTGGAGGTATCTTTATATATGATTTTTTTTGTTTTTTGGTACATTT
TCCGTTCAGCCTTTGGAATATGCATTTTGATTGATGAAATTTATCAGATT
ATTGTTGACCTCAAAGTATTGAAATAAAGTCCGGTAGAGTTGGTTATAAT
TTCACTGAAACCTTGAGAAAAGTCCCAAAAAGCTGAAATTTGGCACAGCT
GTCTCTAATAGGATGACTAACTACCAGAAAAAAAGCCCCGTCCATAGGGC
ATTAGGAAACCATTTTCCGACCGAAAATTGAAAAGGATGCTTTTTTAGGG
TTGTAAAGGCTAGCAAATTTCAGCTTGTTGGGAATTTCCAATGTTAAACG
ATAATTATTCTACTGGATTAATGCAGTCTGTTAGAATTAGTTGGAATTCA
ACTGAAATAATCAGAAAACTAAGTAAAATGTTTTATTCTTTGCCAAGAAA
CGTCTTATTTTATTTATCTAGATATTACTCATCACGGATGTCAGGGTTGG
AGCTGCAGGTTTCTGCATTAGCGTTGAGTTGCACTAACATATTAATGGTT
ATGTTTTATAAACGAAGACGTCTTCCTTTCAAGTTTAAGGTTAGTTAATA
AATGCTTTGGGACTTACATATGGGAACTTATTTTGATTTATTCACAGTGA
AAAAACCCTAAAAGCTTCACAAAAGAAGATGCTTTGTATAGATCTATCCC
TGAAATAACTTTCAATTTTGAATTACTTTTCAAATTTAAACATTTTGTTT
TAAGCTTTGATGCAAAAATGAACTCTCTGTTATTTCAGTCAAGCCTTCCA
ATCGAACGTCTTGGCTTTTTACATCTCTCCTTCAACTTTTGTGCAATCTT
CCTTATCATGTTCACGTCCATGTTGATGTGGTTCACTAAAATGTATATTT
CATGGGCGTGTTTCAAAGATCAGAATGAGTTACTTGGACTTTGTCAAGTG
ACGAATCAGGTTAGTTAAAGTTGTACAACTTTATATTTGTACAAACCTAT
TTGTCATGAAATGGTTCCTGCAAACACCTCGCCTTACTGAGTAAGAAATG
ATTTAAGTCACTTCTGTAATCTAGATAGGGGCTTAACTTCTGAGTATTTT
TCTCACTGGCAACGAATTTAATGTAATTGTTCATTTTTCCTAAGTGTTCC
ACAGTAACCGAGACACCTGGTTGATACACCCCTCTCACAGACCTGGTGGG
ACCCCTTCCCACTGGGAAAATTGACCTATGACAATAATCAAATAATTAAA
TCCTCACTGCAAAATAGTGTGCTATTTTTTCCATCCCAATTTCTGACGCG
AAAACAATGGATTTTAAAATCCCCAGCTATAAAAAAGCATGGGAATATCA
ATTTATCAGTCATTTTTATTCCGGCTGACTGACAAAATACTACCAAGTTT
ATGAGAAAGGGGTGTGTTGATCCATTTTAAGAACTCCTTATACTTGGTCT
GCGTCTCTGAAGTTGCACCGATATAGGTTTTTTTCTTTCCAACGTTCAGG
TACAATGCTATCCGTGTCAAACATGCACAGAAGAAGGAATCAATAAATGT
TACAAACGAGAAATTGACGAAACGCTCTTCTCGTGCAATACAAAATATCC
AAAAGAAGCTAAAAAGGTAAAAAGAATCAACTATTCTAATATGTCACTGT
ATAGGTGAACAACCGCTAAACAATCAATTATACCAAGGATCGACTTACCT
CTCGTAAAATGATACCACGGCGTAAAAAACAACCCTAAATTTTCAATTTT
GGGATCATTTGCATCATTAAGTCTATGTAAAATCTTTTCAAAATGTTGAC
TTTGCGTTGCATTTCATTTTGCAGGGAGCATTTTGCATCTTCAATTATAA
CATGAGTACAGTGGAATTCTTAACAAGTAAGTACATTCTTATATTTTTTT
TCGCTCGCAATACTTAATTAGTGCACGATTTAACGTCCATTATTCCTAGC
AGCTGGAGTTGGAGATAATCCTCAGATGATTGTACGCTAGGCTGTTCTAT
CATCAGCCATGTCGAGAGTTGCATTTATCAAGTTGATGTATGGTAACGAA
TAAAATAATGGTAACGAATTGACAAACTTGATCTTCAAACTTATTATAAG
GCAAAGAGAATGGAAACCGAAATAAAAGAAACATTATATTTAAGATTGAT
CAAAACTTTGAGGCTTATTTAAGCCTTATTTCTTTGATTAAGGCAAACTA
TGTGATGACATTTGTACAATTTTTCGTTTAAGTTTTCGCCTATATTGGAG
GACTGTGTGTTTTCCTGAGTAACTTTATCAAATTGGTTGGACATTACATA
TTACGTGTGTTATTCATGTTTTACGAATGGTGTTTAAATCGATGTAATCG
AACCAGTCGGATGATTGATAACCACCGACAACGATTAGTACAACGTAGAC
AGTTAAGAGAACACAGGATGAATTGCGATCGGCAATTATTAACCGATTCT
ATATCGCCCATACAGTCACCTAGAGAACTTCATAATCCAGTCGGTTCGCC
AGGTGGCTCCACTAACGCATCAGGTGGATTAAGTCCTCG

Coding sequence (CDS) from alignment at scaffold_302:79109..83747-

>TCONS_00057951 ID=TCONS_00057951|Name=TCONS_00057951|organism=Clytia hemisphaerica|type=CDS|length=11178bp|location=Sequence derived from alignment at scaffold_302:79109..83747- (Clytia hemisphaerica)
TTTTCGCCTATATTGGAGGACTGTGTGTTTTCCTGAGTAACTTTATCAAA
TTGGTTGGACATTACATATTACGTGTGTTATTCATGTTTTACGAATGGTG
TTTAAATCGATGTAATCGAACCAGTCGGATGATTGATAACCACCGACAAC
GATTAGTACAACGTAGACAGTTAAGAGAACACAGGATGAATTGCGATCGG
CAATTATTAACCGATTCTATATCGCCCATACAGTCACCTAGAGAACTTCA
TAATCCAGTCGGTTCGCCAGGTGGCTCCACTAACGCATCAGGTGGATTAA
GTCCTGGAGCATTTTGCATCTTCAATTATAACATGAGTACAGTGGAATTC
TTAACAAGTACAATGCTATCCGTGTCAAACATGCACAGAAGAAGGAATCA
ATAAATGTTACAAACGAGAAATTGACGAAACGCTCTTCTCGTGCAATACA
AAATATCCAAAAGAAGCTAAAAAGTCAAGCCTTCCAATCGAACGTCTTGG
CTTTTTACATCTCTCCTTCAACTTTTGTGCAATCTTCCTTATCATGTTCA
CGTCCATGTTGATGTGGTTCACTAAAATGTATATTTCATGGGCGTGTTTC
AAAGATCAGAATGAGTTACTTGGACTTTGTCAAGTGACGAATCAGATATT
ACTCATCACGGATGTCAGGGTTGGAGCTGCAGGTTTCTGCATTAGCGTTG
AGTTGCACTAACATATTAATGGTTATGTTTTATAAACGAAGACGTCTTCC
TTTCAAGTTTAAGGCGTATGCTGGCGTCGCAACATGGCTCAAATATCAAG
GGCTGGCTTGGTTACTAACTTTCTCTATAACCATTGCTTTTATTTTCTTC
TGGGTCGTTAACTTTTGGGCCCAAGGGGCCTTCGATTGGAGGGAAATTTG
AGATTGATGGATCTTCCAATCCTTCTCATGTTGCTTAATGACCCAAGGCA
AAGACAAGCAATGTCAACACTGTCTCATCAGTTAAGAAGAATGTCTTCAT
CAGGCTCAATAACAAATCTTGATCTTAACTCCAATACCGAGAATGACACA
TCACCATTACGTCAAACTCAAACAGTCAAAACCAAATACTATTTCTTTAA
AGTTTTACAATTTCTTCATTTTGGCGTTGTCATGTTTTACTTGTGGGCAG
GATTGGTTGAGTTCATTAATAATCCACCATTTTTTGATGCATATGGTGAT
GCTCTCACAAATATGAATAAACTACCAGAGGGAATATTTGCGTTTTCGCC
TATATTGGAGGACTGTGTGTTTTCCTGAGTAACTTTATCAAATTGGTTGG
ACATTACATATTACGTGTGTTATTCATGTTTTACGAATGGTGTTTAAATC
GATGTAATCGAACCAGTCGGATGATTGATAACCACCGACAACGATTAGTA
CAACGTAGACAGTTAAGAGAACACAGGATGAATTGCGATCGGCAATTATT
AACCGATTCTATATCGCCCATACAGTCACCTAGAGAACTTCATAATCCAG
TCGGTTCGCCAGGTGGCTCCACTAACGCATCAGGTGGATTAAGTCCTGGA
GCATTTTGCATCTTCAATTATAACATGAGTACAGTGGAATTCTTAACAAG
TACAATGCTATCCGTGTCAAACATGCACAGAAGAAGGAATCAATAAATGT
TACAAACGAGAAATTGACGAAACGCTCTTCTCGTGCAATACAAAATATCC
AAAAGAAGCTAAAAAGTCAAGCCTTCCAATCGAACGTCTTGGCTTTTTAC
ATCTCTCCTTCAACTTTTGTGCAATCTTCCTTATCATGTTCACGTCCATG
TTGATGTGGTTCACTAAAATGTATATTTCATGGGCGTGTTTCAAAGATCA
GAATGAGTTACTTGGACTTTGTCAAGTGACGAATCAGATATTACTCATCA
CGGATGTCAGGGTTGGAGCTGCAGGTTTCTGCATTAGCGTTGAGTTGCAC
TAACATATTAATGGTTATGTTTTATAAACGAAGACGTCTTCCTTTCAAGT
TTAAGGCGTATGCTGGCGTCGCAACATGGCTCAAATATCAAGGGCTGGCT
TGGTTACTAACTTTCTCTATAACCATTGCTTTTATTTTCTTCTGGGTCGT
TAACTTTTGGGCCCAAGGGGCCTTCGATTGGAGGGAAATTTGAGATTGAT
GGATCTTCCAATCCTTCTCATGTTGCTTAATGACCCAAGGCAAAGACAAG
CAATGTCAACACTGTCTCATCAGTTAAGAAGAATGTCTTCATCAGGCTCA
ATAACAAATCTTGATCTTAACTCCAATACCGAGAATGACACATCACCATT
ACGTCAAACTCAAACAGTCAAAACCAAATACTATTTCTTTAAAGTTTTAC
AATTTCTTCATTTTGGCGTTGTCATGTTTTACTTGTGGGCAGGATTGGTT
GAGTTCATTAATAATCCACCATTTTTTGATGCATATGGTGATGCTCTCAC
AAATATGAATAAACTACCAGAGGGAATATTTGCGTTTTCGCCTATATTGG
AGGACTGTGTGTTTTCCTGAGTAACTTTATCAAATTGGTTGGACATTACA
TATTACGTGTGTTATTCATGTTTTACGAATGGTGTTTAAATCGATGTAAT
CGAACCAGTCGGATGATTGATAACCACCGACAACGATTAGTACAACGTAG
ACAGTTAAGAGAACACAGGATGAATTGCGATCGGCAATTATTAACCGATT
CTATATCGCCCATACAGTCACCTAGAGAACTTCATAATCCAGTCGGTTCG
CCAGGTGGCTCCACTAACGCATCAGGTGGATTAAGTCCTGGAGCATTTTG
CATCTTCAATTATAACATGAGTACAGTGGAATTCTTAACAAGTACAATGC
TATCCGTGTCAAACATGCACAGAAGAAGGAATCAATAAATGTTACAAACG
AGAAATTGACGAAACGCTCTTCTCGTGCAATACAAAATATCCAAAAGAAG
CTAAAAAGTCAAGCCTTCCAATCGAACGTCTTGGCTTTTTACATCTCTCC
TTCAACTTTTGTGCAATCTTCCTTATCATGTTCACGTCCATGTTGATGTG
GTTCACTAAAATGTATATTTCATGGGCGTGTTTCAAAGATCAGAATGAGT
TACTTGGACTTTGTCAAGTGACGAATCAGATATTACTCATCACGGATGTC
AGGGTTGGAGCTGCAGGTTTCTGCATTAGCGTTGAGTTGCACTAACATAT
TAATGGTTATGTTTTATAAACGAAGACGTCTTCCTTTCAAGTTTAAGGCG
TATGCTGGCGTCGCAACATGGCTCAAATATCAAGGGCTGGCTTGGTTACT
AACTTTCTCTATAACCATTGCTTTTATTTTCTTCTGGGTCGTTAACTTTT
GGGCCCAAGGGGCCTTCGATTGGAGGGAAATTTGAGATTGATGGATCTTC
CAATCCTTCTCATGTTGCTTAATGACCCAAGGCAAAGACAAGCAATGTCA
ACACTGTCTCATCAGTTAAGAAGAATGTCTTCATCAGGCTCAATAACAAA
TCTTGATCTTAACTCCAATACCGAGAATGACACATCACCATTACGTCAAA
CTCAAACAGTCAAAACCAAATACTATTTCTTTAAAGTTTTACAATTTCTT
CATTTTGGCGTTGTCATGTTTTACTTGTGGGCAGGATTGGTTGAGTTCAT
TAATAATCCACCATTTTTTGATGCATATGGTGATGCTCTCACAAATATGA
ATAAACTACCAGAGGGAATATTTGCGTTTTCGCCTATATTGGAGGACTGT
GTGTTTTCCTGAGTAACTTTATCAAATTGGTTGGACATTACATATTACGT
GTGTTATTCATGTTTTACGAATGGTGTTTAAATCGATGTAATCGAACCAG
TCGGATGATTGATAACCACCGACAACGATTAGTACAACGTAGACAGTTAA
GAGAACACAGGATGAATTGCGATCGGCAATTATTAACCGATTCTATATCG
CCCATACAGTCACCTAGAGAACTTCATAATCCAGTCGGTTCGCCAGGTGG
CTCCACTAACGCATCAGGTGGATTAAGTCCTGGAGCATTTTGCATCTTCA
ATTATAACATGAGTACAGTGGAATTCTTAACAAGTACAATGCTATCCGTG
TCAAACATGCACAGAAGAAGGAATCAATAAATGTTACAAACGAGAAATTG
ACGAAACGCTCTTCTCGTGCAATACAAAATATCCAAAAGAAGCTAAAAAG
TCAAGCCTTCCAATCGAACGTCTTGGCTTTTTACATCTCTCCTTCAACTT
TTGTGCAATCTTCCTTATCATGTTCACGTCCATGTTGATGTGGTTCACTA
AAATGTATATTTCATGGGCGTGTTTCAAAGATCAGAATGAGTTACTTGGA
CTTTGTCAAGTGACGAATCAGATATTACTCATCACGGATGTCAGGGTTGG
AGCTGCAGGTTTCTGCATTAGCGTTGAGTTGCACTAACATATTAATGGTT
ATGTTTTATAAACGAAGACGTCTTCCTTTCAAGTTTAAGGCGTATGCTGG
CGTCGCAACATGGCTCAAATATCAAGGGCTGGCTTGGTTACTAACTTTCT
CTATAACCATTGCTTTTATTTTCTTCTGGGTCGTTAACTTTTGGGCCCAA
GGGGCCTTCGATTGGAGGGAAATTTGAGATTGATGGATCTTCCAATCCTT
CTCATGTTGCTTAATGACCCAAGGCAAAGACAAGCAATGTCAACACTGTC
TCATCAGTTAAGAAGAATGTCTTCATCAGGCTCAATAACAAATCTTGATC
TTAACTCCAATACCGAGAATGACACATCACCATTACGTCAAACTCAAACA
GTCAAAACCAAATACTATTTCTTTAAAGTTTTACAATTTCTTCATTTTGG
CGTTGTCATGTTTTACTTGTGGGCAGGATTGGTTGAGTTCATTAATAATC
CACCATTTTTTGATGCATATGGTGATGCTCTCACAAATATGAATAAACTA
CCAGAGGGAATATTTGCGTTTTCGCCTATATTGGAGGACTGTGTGTTTTC
CTGAGTAACTTTATCAAATTGGTTGGACATTACATATTACGTGTGTTATT
CATGTTTTACGAATGGTGTTTAAATCGATGTAATCGAACCAGTCGGATGA
TTGATAACCACCGACAACGATTAGTACAACGTAGACAGTTAAGAGAACAC
AGGATGAATTGCGATCGGCAATTATTAACCGATTCTATATCGCCCATACA
GTCACCTAGAGAACTTCATAATCCAGTCGGTTCGCCAGGTGGCTCCACTA
ACGCATCAGGTGGATTAAGTCCTGGAGCATTTTGCATCTTCAATTATAAC
ATGAGTACAGTGGAATTCTTAACAAGTACAATGCTATCCGTGTCAAACAT
GCACAGAAGAAGGAATCAATAAATGTTACAAACGAGAAATTGACGAAACG
CTCTTCTCGTGCAATACAAAATATCCAAAAGAAGCTAAAAAGTCAAGCCT
TCCAATCGAACGTCTTGGCTTTTTACATCTCTCCTTCAACTTTTGTGCAA
TCTTCCTTATCATGTTCACGTCCATGTTGATGTGGTTCACTAAAATGTAT
ATTTCATGGGCGTGTTTCAAAGATCAGAATGAGTTACTTGGACTTTGTCA
AGTGACGAATCAGATATTACTCATCACGGATGTCAGGGTTGGAGCTGCAG
GTTTCTGCATTAGCGTTGAGTTGCACTAACATATTAATGGTTATGTTTTA
TAAACGAAGACGTCTTCCTTTCAAGTTTAAGGCGTATGCTGGCGTCGCAA
CATGGCTCAAATATCAAGGGCTGGCTTGGTTACTAACTTTCTCTATAACC
ATTGCTTTTATTTTCTTCTGGGTCGTTAACTTTTGGGCCCAAGGGGCCTT
CGATTGGAGGGAAATTTGAGATTGATGGATCTTCCAATCCTTCTCATGTT
GCTTAATGACCCAAGGCAAAGACAAGCAATGTCAACACTGTCTCATCAGT
TAAGAAGAATGTCTTCATCAGGCTCAATAACAAATCTTGATCTTAACTCC
AATACCGAGAATGACACATCACCATTACGTCAAACTCAAACAGTCAAAAC
CAAATACTATTTCTTTAAAGTTTTACAATTTCTTCATTTTGGCGTTGTCA
TGTTTTACTTGTGGGCAGGATTGGTTGAGTTCATTAATAATCCACCATTT
TTTGATGCATATGGTGATGCTCTCACAAATATGAATAAACTACCAGAGGG
AATATTTGCGTTTTCGCCTATATTGGAGGACTGTGTGTTTTCCTGAGTAA
CTTTATCAAATTGGTTGGACATTACATATTACGTGTGTTATTCATGTTTT
ACGAATGGTGTTTAAATCGATGTAATCGAACCAGTCGGATGATTGATAAC
CACCGACAACGATTAGTACAACGTAGACAGTTAAGAGAACACAGGATGAA
TTGCGATCGGCAATTATTAACCGATTCTATATCGCCCATACAGTCACCTA
GAGAACTTCATAATCCAGTCGGTTCGCCAGGTGGCTCCACTAACGCATCA
GGTGGATTAAGTCCTGGAGCATTTTGCATCTTCAATTATAACATGAGTAC
AGTGGAATTCTTAACAAGTACAATGCTATCCGTGTCAAACATGCACAGAA
GAAGGAATCAATAAATGTTACAAACGAGAAATTGACGAAACGCTCTTCTC
GTGCAATACAAAATATCCAAAAGAAGCTAAAAAGTCAAGCCTTCCAATCG
AACGTCTTGGCTTTTTACATCTCTCCTTCAACTTTTGTGCAATCTTCCTT
ATCATGTTCACGTCCATGTTGATGTGGTTCACTAAAATGTATATTTCATG
GGCGTGTTTCAAAGATCAGAATGAGTTACTTGGACTTTGTCAAGTGACGA
ATCAGATATTACTCATCACGGATGTCAGGGTTGGAGCTGCAGGTTTCTGC
ATTAGCGTTGAGTTGCACTAACATATTAATGGTTATGTTTTATAAACGAA
GACGTCTTCCTTTCAAGTTTAAGGCGTATGCTGGCGTCGCAACATGGCTC
AAATATCAAGGGCTGGCTTGGTTACTAACTTTCTCTATAACCATTGCTTT
TATTTTCTTCTGGGTCGTTAACTTTTGGGCCCAAGGGGCCTTCGATTGGA
GGGAAATTTGAGATTGATGGATCTTCCAATCCTTCTCATGTTGCTTAATG
ACCCAAGGCAAAGACAAGCAATGTCAACACTGTCTCATCAGTTAAGAAGA
ATGTCTTCATCAGGCTCAATAACAAATCTTGATCTTAACTCCAATACCGA
GAATGACACATCACCATTACGTCAAACTCAAACAGTCAAAACCAAATACT
ATTTCTTTAAAGTTTTACAATTTCTTCATTTTGGCGTTGTCATGTTTTAC
TTGTGGGCAGGATTGGTTGAGTTCATTAATAATCCACCATTTTTTGATGC
ATATGGTGATGCTCTCACAAATATGAATAAACTACCAGAGGGAATATTTG
CGTTTTCGCCTATATTGGAGGACTGTGTGTTTTCCTGAGTAACTTTATCA
AATTGGTTGGACATTACATATTACGTGTGTTATTCATGTTTTACGAATGG
TGTTTAAATCGATGTAATCGAACCAGTCGGATGATTGATAACCACCGACA
ACGATTAGTACAACGTAGACAGTTAAGAGAACACAGGATGAATTGCGATC
GGCAATTATTAACCGATTCTATATCGCCCATACAGTCACCTAGAGAACTT
CATAATCCAGTCGGTTCGCCAGGTGGCTCCACTAACGCATCAGGTGGATT
AAGTCCTGGAGCATTTTGCATCTTCAATTATAACATGAGTACAGTGGAAT
TCTTAACAAGTACAATGCTATCCGTGTCAAACATGCACAGAAGAAGGAAT
CAATAAATGTTACAAACGAGAAATTGACGAAACGCTCTTCTCGTGCAATA
CAAAATATCCAAAAGAAGCTAAAAAGTCAAGCCTTCCAATCGAACGTCTT
GGCTTTTTACATCTCTCCTTCAACTTTTGTGCAATCTTCCTTATCATGTT
CACGTCCATGTTGATGTGGTTCACTAAAATGTATATTTCATGGGCGTGTT
TCAAAGATCAGAATGAGTTACTTGGACTTTGTCAAGTGACGAATCAGATA
TTACTCATCACGGATGTCAGGGTTGGAGCTGCAGGTTTCTGCATTAGCGT
TGAGTTGCACTAACATATTAATGGTTATGTTTTATAAACGAAGACGTCTT
CCTTTCAAGTTTAAGGCGTATGCTGGCGTCGCAACATGGCTCAAATATCA
AGGGCTGGCTTGGTTACTAACTTTCTCTATAACCATTGCTTTTATTTTCT
TCTGGGTCGTTAACTTTTGGGCCCAAGGGGCCTTCGATTGGAGGGAAATT
TGAGATTGATGGATCTTCCAATCCTTCTCATGTTGCTTAATGACCCAAGG
CAAAGACAAGCAATGTCAACACTGTCTCATCAGTTAAGAAGAATGTCTTC
ATCAGGCTCAATAACAAATCTTGATCTTAACTCCAATACCGAGAATGACA
CATCACCATTACGTCAAACTCAAACAGTCAAAACCAAATACTATTTCTTT
AAAGTTTTACAATTTCTTCATTTTGGCGTTGTCATGTTTTACTTGTGGGC
AGGATTGGTTGAGTTCATTAATAATCCACCATTTTTTGATGCATATGGTG
ATGCTCTCACAAATATGAATAAACTACCAGAGGGAATATTTGCGTTTTCG
CCTATATTGGAGGACTGTGTGTTTTCCTGAGTAACTTTATCAAATTGGTT
GGACATTACATATTACGTGTGTTATTCATGTTTTACGAATGGTGTTTAAA
TCGATGTAATCGAACCAGTCGGATGATTGATAACCACCGACAACGATTAG
TACAACGTAGACAGTTAAGAGAACACAGGATGAATTGCGATCGGCAATTA
TTAACCGATTCTATATCGCCCATACAGTCACCTAGAGAACTTCATAATCC
AGTCGGTTCGCCAGGTGGCTCCACTAACGCATCAGGTGGATTAAGTCCTG
GAGCATTTTGCATCTTCAATTATAACATGAGTACAGTGGAATTCTTAACA
AGTACAATGCTATCCGTGTCAAACATGCACAGAAGAAGGAATCAATAAAT
GTTACAAACGAGAAATTGACGAAACGCTCTTCTCGTGCAATACAAAATAT
CCAAAAGAAGCTAAAAAGTCAAGCCTTCCAATCGAACGTCTTGGCTTTTT
ACATCTCTCCTTCAACTTTTGTGCAATCTTCCTTATCATGTTCACGTCCA
TGTTGATGTGGTTCACTAAAATGTATATTTCATGGGCGTGTTTCAAAGAT
CAGAATGAGTTACTTGGACTTTGTCAAGTGACGAATCAGATATTACTCAT
CACGGATGTCAGGGTTGGAGCTGCAGGTTTCTGCATTAGCGTTGAGTTGC
ACTAACATATTAATGGTTATGTTTTATAAACGAAGACGTCTTCCTTTCAA
GTTTAAGGCGTATGCTGGCGTCGCAACATGGCTCAAATATCAAGGGCTGG
CTTGGTTACTAACTTTCTCTATAACCATTGCTTTTATTTTCTTCTGGGTC
GTTAACTTTTGGGCCCAAGGGGCCTTCGATTGGAGGGAAATTTGAGATTG
ATGGATCTTCCAATCCTTCTCATGTTGCTTAATGACCCAAGGCAAAGACA
AGCAATGTCAACACTGTCTCATCAGTTAAGAAGAATGTCTTCATCAGGCT
CAATAACAAATCTTGATCTTAACTCCAATACCGAGAATGACACATCACCA
TTACGTCAAACTCAAACAGTCAAAACCAAATACTATTTCTTTAAAGTTTT
ACAATTTCTTCATTTTGGCGTTGTCATGTTTTACTTGTGGGCAGGATTGG
TTGAGTTCATTAATAATCCACCATTTTTTGATGCATATGGTGATGCTCTC
ACAAATATGAATAAACTACCAGAGGGAATATTTGCGTTTTCGCCTATATT
GGAGGACTGTGTGTTTTCCTGAGTAACTTTATCAAATTGGTTGGACATTA
CATATTACGTGTGTTATTCATGTTTTACGAATGGTGTTTAAATCGATGTA
ATCGAACCAGTCGGATGATTGATAACCACCGACAACGATTAGTACAACGT
AGACAGTTAAGAGAACACAGGATGAATTGCGATCGGCAATTATTAACCGA
TTCTATATCGCCCATACAGTCACCTAGAGAACTTCATAATCCAGTCGGTT
CGCCAGGTGGCTCCACTAACGCATCAGGTGGATTAAGTCCTGGAGCATTT
TGCATCTTCAATTATAACATGAGTACAGTGGAATTCTTAACAAGTACAAT
GCTATCCGTGTCAAACATGCACAGAAGAAGGAATCAATAAATGTTACAAA
CGAGAAATTGACGAAACGCTCTTCTCGTGCAATACAAAATATCCAAAAGA
AGCTAAAAAGTCAAGCCTTCCAATCGAACGTCTTGGCTTTTTACATCTCT
CCTTCAACTTTTGTGCAATCTTCCTTATCATGTTCACGTCCATGTTGATG
TGGTTCACTAAAATGTATATTTCATGGGCGTGTTTCAAAGATCAGAATGA
GTTACTTGGACTTTGTCAAGTGACGAATCAGATATTACTCATCACGGATG
TCAGGGTTGGAGCTGCAGGTTTCTGCATTAGCGTTGAGTTGCACTAACAT
ATTAATGGTTATGTTTTATAAACGAAGACGTCTTCCTTTCAAGTTTAAGG
CGTATGCTGGCGTCGCAACATGGCTCAAATATCAAGGGCTGGCTTGGTTA
CTAACTTTCTCTATAACCATTGCTTTTATTTTCTTCTGGGTCGTTAACTT
TTGGGCCCAAGGGGCCTTCGATTGGAGGGAAATTTGAGATTGATGGATCT
TCCAATCCTTCTCATGTTGCTTAATGACCCAAGGCAAAGACAAGCAATGT
CAACACTGTCTCATCAGTTAAGAAGAATGTCTTCATCAGGCTCAATAACA
AATCTTGATCTTAACTCCAATACCGAGAATGACACATCACCATTACGTCA
AACTCAAACAGTCAAAACCAAATACTATTTCTTTAAAGTTTTACAATTTC
TTCATTTTGGCGTTGTCATGTTTTACTTGTGGGCAGGATTGGTTGAGTTC
ATTAATAATCCACCATTTTTTGATGCATATGGTGATGCTCTCACAAATAT
GAATAAACTACCAGAGGGAATATTTGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036535XLOC_036535Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057951-exon-scaffold_302-1575043694:83539..83747TCONS_00057951-exon-scaffold_302-1575043694:83539..83747Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:83127..83188TCONS_00057951-exon-scaffold_302-1575043694:83127..83188Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:82418..82701TCONS_00057951-exon-scaffold_302-1575043694:82418..82701Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:82278..82301TCONS_00057951-exon-scaffold_302-1575043694:82278..82301Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:82102..82146TCONS_00057951-exon-scaffold_302-1575043694:82102..82146Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:81638..81765TCONS_00057951-exon-scaffold_302-1575043694:81638..81765Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:81059..81176TCONS_00057951-exon-scaffold_302-1575043694:81059..81176Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:80689..80859TCONS_00057951-exon-scaffold_302-1575043694:80689..80859Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:80032..80148TCONS_00057951-exon-scaffold_302-1575043694:80032..80148Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:79772..79823TCONS_00057951-exon-scaffold_302-1575043694:79772..79823Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1575043694:79109..79415TCONS_00057951-exon-scaffold_302-1575043694:79109..79415Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:83539..83747TCONS_00057951-exon-scaffold_302-1510915933:83539..83747Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:83127..83188TCONS_00057951-exon-scaffold_302-1510915933:83127..83188Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:82418..82701TCONS_00057951-exon-scaffold_302-1510915933:82418..82701Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:82278..82301TCONS_00057951-exon-scaffold_302-1510915933:82278..82301Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:82102..82146TCONS_00057951-exon-scaffold_302-1510915933:82102..82146Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:81638..81765TCONS_00057951-exon-scaffold_302-1510915933:81638..81765Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:81059..81176TCONS_00057951-exon-scaffold_302-1510915933:81059..81176Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:80689..80859TCONS_00057951-exon-scaffold_302-1510915933:80689..80859Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:80032..80148TCONS_00057951-exon-scaffold_302-1510915933:80032..80148Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:79772..79823TCONS_00057951-exon-scaffold_302-1510915933:79772..79823Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1510915933:79109..79415TCONS_00057951-exon-scaffold_302-1510915933:79109..79415Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:83539..83747TCONS_00057951-exon-scaffold_302-1491911889:83539..83747Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:83127..83188TCONS_00057951-exon-scaffold_302-1491911889:83127..83188Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:82418..82701TCONS_00057951-exon-scaffold_302-1491911889:82418..82701Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:82278..82301TCONS_00057951-exon-scaffold_302-1491911889:82278..82301Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:82102..82146TCONS_00057951-exon-scaffold_302-1491911889:82102..82146Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:81638..81765TCONS_00057951-exon-scaffold_302-1491911889:81638..81765Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:81059..81176TCONS_00057951-exon-scaffold_302-1491911889:81059..81176Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:80689..80859TCONS_00057951-exon-scaffold_302-1491911889:80689..80859Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:80032..80148TCONS_00057951-exon-scaffold_302-1491911889:80032..80148Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:79772..79823TCONS_00057951-exon-scaffold_302-1491911889:79772..79823Clytia hemisphaericaexon
TCONS_00057951-exon-scaffold_302-1491911889:79109..79415TCONS_00057951-exon-scaffold_302-1491911889:79109..79415Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057951-proteinTCONS_00057951-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_302supercontigscaffold_302:79109..83747 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.648299	0.251706	0.174413	0.226434	0.36558	0.274949	0.539722	0.434406	0.344036	0.307836	0.791704	0.31742	0.271004	0.321236	0.877839	1.09412	0.6238	0.991069	0.981097	0.712877	0.59686	2.11298	0.716314	1.05541	0	0	0.300632	0.794516	0.604662	2.41393
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057951 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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