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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058102 ID=TCONS_00058102|Name=TCONS_00058102|organism=Clytia hemisphaerica|type=transcript|length=770bp AAAATTTTGCTGAGCCACAAGCTTGCTGGGATATCATCACTCGAATATGT TTGGAAGCACAAGAACCCCTCAAAGATATCAGAATCACTGTCTAAAGTTG TTGCCATAATGAAGGATTTGCTAACACTGTGCAAATCTCACAACATCGAA TCAAATCTTTACAACAGCAATGGCATCAGAGACATCTACAAAGTCATAGG AGAGTCAAGAGCAACCAAATTCCTTGAAATCGTCATCGATGAAGACCCAG ATGATGAAAGGCTATGGAAAAACTTAATTGAATTCCTCGAGCGTGAAGTC AAAATACAGCAACAAAAGCAGCTCGTCCATTATGATCAACATCAATCAAC AACTCCTCCATCTCAACCATTCCGTCCCAGAAAATCTGGACATCACTCAT CAGCCTTCACAGATCAGCACAAATGTTTCATCTGCAATGCAACGGATCAT ACACCAACCCTTGGTCCTCACAATTCCAAGCTCATCCAATACTTCGTGTG TAAAGACTTTGTTGAGATGACACCTGCCAAACGATTCGCAACCCTCAGGA GACTCAACCTTTTTTAACAGTGCCTATTTCCAGGTGCAGATGTCAACACG GGAAAACATCGCGAAGGAAGATGCCAAAAAGACTTCATTTGCCCACACCA GAGTCATGATAATGAGACGTTCCCTGTCAAAAAGCACGTCCTCGTTTGTG AAGAACACAAGACTGAACCTAAGAACATCGAAATGCTCGACAAGTTCAAA TCACGATGCATCTCCAAAAG Run BLAST on NCBI protein sequence of TCONS_00058102-protein >TCONS_00058102-protein ID=TCONS_00058102-protein|Name=TCONS_00058102-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
KILLSHKLAGISSLEYVWKHKNPSKISESLSKVVAIMKDLLTLCKSHNIE SNLYNSNGIRDIYKVIGESRATKFLEIVIDEDPDDERLWKNLIEFLEREV KIQQQKQLVHYDQHQSTTPPSQPFRPRKSGHHSSAFTDQHKCFICNATDH TPTLGPHNSKLIQYFVCKDFVEMTPAKRFATLRRLNLF Run BLAST on NCBI transcript from alignment at scaffold_305:121450..122219 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058102 ID=TCONS_00058102|Name=TCONS_00058102|organism=Clytia hemisphaerica|type=transcript|length=770bp|location=Sequence derived from alignment at scaffold_305:121450..122219 (Clytia hemisphaerica) CTTTTGGAGATGCATCGTGATTTGAACTTGTCGAGCATTTCGATGTTCTT
AGGTTCAGTCTTGTGTTCTTCACAAACGAGGACGTGCTTTTTGACAGGGA
ACGTCTCATTATCATGACTCTGGTGTGGGCAAATGAAGTCTTTTTGGCAT
CTTCCTTCGCGATGTTTTCCCGTGTTGACATCTGCACCTGGAAATAGGCA
CTGTTAAAAAAGGTTGAGTCTCCTGAGGGTTGCGAATCGTTTGGCAGGTG
TCATCTCAACAAAGTCTTTACACACGAAGTATTGGATGAGCTTGGAATTG
TGAGGACCAAGGGTTGGTGTATGATCCGTTGCATTGCAGATGAAACATTT
GTGCTGATCTGTGAAGGCTGATGAGTGATGTCCAGATTTTCTGGGACGGA
ATGGTTGAGATGGAGGAGTTGTTGATTGATGTTGATCATAATGGACGAGC
TGCTTTTGTTGCTGTATTTTGACTTCACGCTCGAGGAATTCAATTAAGTT
TTTCCATAGCCTTTCATCATCTGGGTCTTCATCGATGACGATTTCAAGGA
ATTTGGTTGCTCTTGACTCTCCTATGACTTTGTAGATGTCTCTGATGCCA
TTGCTGTTGTAAAGATTTGATTCGATGTTGTGAGATTTGCACAGTGTTAG
CAAATCCTTCATTATGGCAACAACTTTAGACAGTGATTCTGATATCTTTG
AGGGGTTCTTGTGCTTCCAAACATATTCGAGTGATGATATCCCAGCAAGC
TTGTGGCTCAGCAAAATTTT Coding sequence (CDS) from alignment at scaffold_305:121450..122219 >TCONS_00058102 ID=TCONS_00058102|Name=TCONS_00058102|organism=Clytia hemisphaerica|type=CDS|length=567bp|location=Sequence derived from alignment at scaffold_305:121450..122219 (Clytia hemisphaerica) TTAAAAAAGGTTGAGTCTCCTGAGGGTTGCGAATCGTTTGGCAGGTGTCA TCTCAACAAAGTCTTTACACACGAAGTATTGGATGAGCTTGGAATTGTGA GGACCAAGGGTTGGTGTATGATCCGTTGCATTGCAGATGAAACATTTGTG CTGATCTGTGAAGGCTGATGAGTGATGTCCAGATTTTCTGGGACGGAATG GTTGAGATGGAGGAGTTGTTGATTGATGTTGATCATAATGGACGAGCTGC TTTTGTTGCTGTATTTTGACTTCACGCTCGAGGAATTCAATTAAGTTTTT CCATAGCCTTTCATCATCTGGGTCTTCATCGATGACGATTTCAAGGAATT TGGTTGCTCTTGACTCTCCTATGACTTTGTAGATGTCTCTGATGCCATTG CTGTTGTAAAGATTTGATTCGATGTTGTGAGATTTGCACAGTGTTAGCAA ATCCTTCATTATGGCAACAACTTTAGACAGTGATTCTGATATCTTTGAGG GGTTCTTGTGCTTCCAAACATATTCGAGTGATGATATCCCAGCAAGCTTG TGGCTCAGCAAAATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00058102-exon-scaffold_305-1491911889:121450..122219 | TCONS_00058102-exon-scaffold_305-1491911889:121450..122219 | Clytia hemisphaerica | exon |
TCONS_00058102-exon-scaffold_305-1510915933:121450..122219 | TCONS_00058102-exon-scaffold_305-1510915933:121450..122219 | Clytia hemisphaerica | exon |
TCONS_00058102-exon-scaffold_305-1575043694:121450..122219 | TCONS_00058102-exon-scaffold_305-1575043694:121450..122219 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_305 | supercontig | scaffold_305:121450..122219 . |
Blast
The following BLAST results are available for this feature:
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