TCONS_00058117 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058117
Unique NameTCONS_00058117
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058117 ID=TCONS_00058117|Name=TCONS_00058117|organism=Clytia hemisphaerica|type=transcript|length=3298bp
GTTTCAGTCCCTCTAATGGTTACCATAGTTAGGAAGGGGGTTGATCCCAT
ttaatttaaatcctgaagggCTAGAAATGAAACTGTTGTGCGATTGAAGG
TAGTTACATCCCACCAAAGTTTTGTGCGCCGCCCTTTGCGGTTTGCATAG
AAACGCCAGATTATTAAGCATTTGTTAGCATTTACAAATTACAATAATAT
GTCAGCTCGCTGCACTAGGTTCAATCCCTCGTCCATATATTATACTATAC
ATGCTCAACAGTGCTCAAACCttagtaaaaaaatttttttcagtgataaA
AATATGTCGCACAAAGAAATTGTATCTGGTATAAATAAATTTACAAAGCA
GGGAAAACGTCAATCAACAACTTATCAATCTGAAAGTATCTACACTTCAA
AGAAACCCAAAAAGATTCCAAAGACACTTGACTTTAACCTAACAGCCTTT
GAAAcaagagttgaaaatgttgacaaTGAAATAGATGGATCGTGTCTGAA
TCTAATTGGTGTTGGACGGCTGTCAATATCAGCTGATTCTGATGCTGAAG
AGGTCAAAGAAAAAATTGTCagaattgtttcaaaaatgaaatatattctT
CCGTCTGCAAACCTAAACCAATACATGTTCATTAAAAGGAAAGGTAAAGC
CAACAAATTTCTACTTGAAGTAACTGATGATGACTATCAATACAATGCAA
GTGCATTGAAGAATCTTAAGACTAAGGATGCCAGTACAGTCTATATACTT
TATGATAAAAATGTTATTGACGAAGATGCAAAGAAAAAGACCAAGATGAA
ACCGTCTGAAAAGCCAAATCAAGCcatcaaatctttcaaatctaAAATCA
TGGAAAACAATGACGAAGATGCTGACAGTGACGATTGTTCTTCGAATGAT
GAGGGGAGCTCAATTGATTCAATAAAGTCGAAAATTGACAACTTGTTTGC
ATTAAAGCCCAACAAGAAAAAGGAATCAAGTATTGATCTTACAGATGAAG
AACCTACTCAAGGTGGAAGTAATTTGGgAGAAGCAAAAATTGTATACAAC
AACTTAATGCTGGCAGTAACAGTTTTGGCAAACATTGACAAATTTTTAGA
GACCATGGATGTCATTTTAAGAGATAAAAAGAACGAGTtacaagaaattg
aaattgcACTTGGCATGGCACTCCTTTGCATACAATACCCCAGAGAAGAC
ATTTGGGATGTTGCTTTTGATGACTTAAGTGACATTTTAAGTCTCACGAA
AGACAGTAAACAAACAATAAATGACATATTGTTCTTGATTTTGAATGCTA
TCAATCATATTGATTGTAAGatCTGGTCAGAGAATTTCCTCCCGATTTTT
ACCAGTTTACTCCAAACTAAAACATGGAATGAAGAATATCACGATATAAG
TGAAGATGCCAATTGTACAATAGTCAAAATGCCATATGCATATAAATGCA
GGTCTTTTGAAGATGTCTTCGATAAGTTCAGGGCAAGAAGCACAATAGAA
ACTCCATCATCCCTCAAAGAAAATGTAACTTCTGaatCAATGTTCCAGCG
AAAATATTTCTCTTCTACACCACCAGTCTTACTTCTTTCTATGGAATGGT
TGTTGCAAAagGGTATGGTTCTTGATTCGAAAGCAAAGCTGCCAGCTTAT
CTACTGGAAGATGTAGAAAACAGCTGCATGGACGAATACAGAATCAAAAT
GGTTGTTGTGACACATCAAAATCATTCGAATGTGTTAGTTCAATCGAATG
ACCTTGTTTGGAGAATATATGGAAacggaaaattgaaaataaagacCAAA
TTTCAAGAACTTTTACATTTTGAATGTGTTACAATCGactTGATCGTTTA
CAATAAAGATTGCAAGCTTTTAATGGCAGTCGAAACTGACCTTTTGGGAA
ATGGGAAGTTTTTAATGGACAGAttacaagaaagaaaacaatcaatgaca
aCAACAGCTAGTAAAGCTCTGGGCTCTCAACATGGTTCAAAAGGAAAAgA
CTTAGAAGGAATCATGAAACGACACCTCGGCACTATTTATGGTCAGCAAA
AACTGAAAGATCAAACCATGGTACTGGCAAGAAGagctttttttgacaaa
aaacggGGAAGATCTACAGACATTTCTCGCCTGCATATGCTGTTTGTAGG
AAACCCAGGAGCAGGAAAAACAATGGCTGCAAGATGCATGGCAGGTATTC
TTAAAGATATTGGAATTTTGAAGAAGGGACATCTAGTGGAGGTTCAACGC
TCCGAACTGGTGTCCCCCTACATTGGTGGTACAAGCCAAAAAACAAAGGC
AgtgttgaaaaaagcaaaagGGGGGGTTTTGTTTATCGACGAAGCATACC
GGCTCAGTTCTGTTGTTGGCAAAGATTACGGTAAGGAAGCCGTCGAAACT
TTGATGTCTGAGATGACGGAACCAGATTGCCCATTGATGATCTTTGCGGG
TTACGAAAAGGAAATGATGGAGTTTGTCAATGTCAACTCAGGCCTTCAAC
GGCGAATTAAACATAAATTCGCTTTCATTGACTTTTCACCCAACGATTTG
GAAACCATCACAATAAAAAAGCTGAGCTCTAGTTTTCCACGCTTTCCACC
ATTCAAGACTGGAGAACTGTTAAACGAATGTTTTCGGAAGCTCTCCAAGG
AGGTAATTTCTAAGCACAATGCTGCCCTGTGCACCGACCTGATCGACCAG
ATCCAAACCGCTCAGGAATCAAGGTTGCCTCAGGACTGCTCTGACGCGGA
CCTTCGAAAAGTCACCGAGGATGACCTAAAGATCGGCATTGAAGCTTTTT
TAAAATGCCACGAAGTAAAACCAACGAATGAAAAGTTGGACTCTGGGGAT
GGCGATATCAATGAGCCAGAGGTGTGTTGGAGATGTAAAAGAAGCATGAA
AGAAGGCTCGGATGATGAATTTACACCACCAAGGGTCGTTCCCGAAATAG
TTGTGAATGTAAATGGCTAAAACGATTGAATTTTACTCGGCGTGTTGTGT
TGAAATTTTGTTCTATATTTTATTTTAGGGTCTCTTGTCTCTTTTGTTTC
TTTGCGTGGAATTTTTGACCTCGCGAAACTTtatctcgcgaaagttaatc
cgctTAAAGTATATCTATTAAGCTTTGATGTCTTTTtgcaaataataaat
aaataattacaACAGGAATGCCATGTTATATGCTATGCTATTTTCAGAGA
ACTGTCACCATTCTTGTACAGCGATGCcagttttttttgtaatttctttt
gtttctcaTAGACAGATAAATTTACATTTCGTCAATTTGTATCCTtcg
Run BLAST on NCBI

transcript from alignment at scaffold_306:87504..96617-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058117 ID=TCONS_00058117|Name=TCONS_00058117|organism=Clytia hemisphaerica|type=transcript|length=9114bp|location=Sequence derived from alignment at scaffold_306:87504..96617- (Clytia hemisphaerica)
GTTTCAGTCCCTCTAATGGTTACCATAGTTAGGAAGGGGGTTGATCCCAT
TTAATTTAAATCCTGAAGGGCTAGAAATGAAACTGTTGTGCGATTGAAGG
TAGTTACATCCCACCAAAGTTTTGTGCGCCGCCCTTTGCGGTTTGCATAG
AAACGCCAGATTATTAAGCATTTGTTAGCATTTACAAATTACAATAATAT
GTCAGCTCGCTGCACTAGGTTCAATCCCTCGTCCATATATTATACTATAC
ATGCTCAACAGTGCTCAAACCTTAGTAAAAAAATTTTTTTCAGTGATAAA
AATATGTCGCACAAAGAAATTGTATCTGGTATAAATAAATTTACAAAGCA
GGGAAAACGTCAATCAACAACTTATCAATCTGAAAGTATCTACACTTCAA
AGAAACCCAAAAAGATTCCAAAGACACTTGACTTTAACCTAACAGCCTTT
GAAACAAGAGTTGAAAATGTTGACAATGAAATAGATGGATCGTGTCTGAA
TCTAATTGGTGTTGGACGGCTGTCAATATCAGCTGATTCTGATGCTGAAG
AGGTCAAAGAAAAAATTGTCAGAATTGTTTCAAAAATGAAATATATTCTT
CCGTCTGCAAACCTAAACCAATACATGTTCATTAAAAGGAAAGGTAAAGC
CAACAAATTTCTACTTGAAGTAACTGATGATGACTATCAATACAATGCAA
GTGCATTGAAGAATCTTAAGACTAAGGATGCCAGTACAGTCTATATACTT
TATGATAAAAATGTTATTGACGAAGATGCAAAGAAAAAGACCAAGATGAA
ACCGTCTGAAAAGCCAAATCAAGCCATCAAATCTTTCAAATCTAAAATCA
TGGAAAACAATGACGAAGATGCTGACAGTGACGATTGTTCTTCGAATGAT
GAGGGGAGCTCAATTGATTCAATAAAGTCGAAAATTGACAACTTGTTTGC
ATTAAAGGTTACTTATTTTCTTTCTTCTTGGTAAGACTTTGACAGACTTG
CTTGTGGAAGGGTGTAACCTTCTACCAAACATTTTATAACAGTATTTTTA
GACATCAAATAAAAAAACCTTTCTTTGACAGTCAGTTCTCTTTTTGAAAT
TTAAATTAATGTAAATCCTTTTAGTCAGTACTCGAATGTCCTCCCATATA
ATTGATATTAAAATGCTCCTTTCACCTTGGGTACTAAATTCCTGTACATT
TGCATTACAGCCCAACAAGAAAAAGGAATCAAGTATTGATCTTACAGATG
AAGAACCTACTCAAGGTGGAAGTAATTTGGGTAAGTAACTTATTTATTCA
TTACACTTTTTTATAAGCAGCCAACCCTAAAGTTAGGGGTGATAGATTCT
GCTATTATAATAATCTGCACCATGATGGCTGGCCTCATTTTTGATACAGA
GTGACATGGGGGCTGCCTCTTTTTTGTGTTGGGTTTGGCCTTTCTTCTAG
GTCCCTGAGAATTGATGGGAGCTAGACCCCTCTGCATTCCATGTATGTAG
TGATACTTCGTTTCAGTCTGAAACTATGCTTAGCTGTGTGCTTATCAGAG
TAATAAAATTGAAAGGTTTGTTAATTTTGACCGCTGGATTTGGACACAAT
ACTTTTTAATGATAATCAACAGTTTTTATTGACTGCCTAAATATTGAATG
TCTAAATATCGATAGTAAGCACTTTATATTGACTGTCAATCTGTTTTTCT
GACAGTCGATATCTAATTCTTTATAACATCAATTTATATCCTTGACTGTC
AAGAGAAAGATAATATAATTATTATCAAATCAAGTATCATTTTTAAACTA
ATTTTTCCTATTTTGAGGTGACTGACAAAACACATTATTTGGACCTGAAG
CCGCAAGGTTTATTCATTTTGCCACTTTTTTATCAGCTTATGATAACAAT
CCACAAGCCCATAAAAGTGACTGCTGACAATTTACCTTTGGTGAGACAAT
TAAATAGATATTGTATATTATTATTTAATTATTTATCTTTTTAAGGAGAA
GCAAAAATTGTATACAACAACTTAATGCTGGCAGTAACAGTTTTGGCAAA
CATTGACAAATTTTTAGAGACCATGGATGTCATTTTAAGAGATAAAAAGA
ACGAGTTACAAGAAATTGAAATTGCACTTGGCATGGTATGAACCCCCAGT
TTTTCATTATCCTCAAATTTTTATGTGCACAATCAGCAAAATTAATTGAC
TGTATCTCTAAAATATGTTTTACTTGATTTTAAACTTCTTTGTTTTGTTT
ACAAGGTCATTAAAACATGATCAAAAACATAATTAAAATTTAAGGATTCA
TTAATTTTTTTTGCTATTAATTAGTTAATTATTAATTGTTAATTAATTAA
TTGTAAAATGATTTTGCTCTTTTCTGCTTTTAAAGGCACTCCTTTGCATA
CAATACCCCAGAGAAGACATTTGGGATGTTGCTTTTGATGACTTAAGTGA
CATTTTAAGTCTCACGAAAGACAGTAAACAAACAATAAATGACATATTGT
TCTTGATTTTGAATGCTATCAATCATATTGATTGTAAGGTAGGTATTGTG
CGTTTTTTTCCAGTACAATTGGTTTTCAATTTAATTAGAAATCAATTTCT
TCAGACTCTTGCTCTTTGAAAAGTAACCATTAGTACATAAATAATCATAT
CTTAACCTATTGGTATTCTATTTATCAACTGCTTGCTAATCTGGTCTGGG
GAAATAAATTAAATCTTTCTTTCTCAAAGTATTCAACACCTATCTACTGT
AATTAGATAAATTATCAAATCAAGAAACTATGCAGTTTTTTTACTGTAAA
ACTTTAGGCGGGAAATGGGATTGAAATGAGAGTTTTCGATGATTTAACAT
TTGTAAGCACTAGGTAATACACAGAAAATTCCCTTTAGAAAATTAACAAA
CAAACTTCACTTTGAAAATGGTCAGAATATTTGATATTTAATTTTAGATC
TGGTCAGAGAATTTCCTCCCGATTTTTACCAGTTTACTCCAAACTAAAAC
ATGGAATGAAGAATATCACGATATAAGTGAAGATGCCAGTAAGTATCTTA
TTTTTTTACTTTCTTCTGTTATTTGAATATTATTATGTACTCAGGTATGA
GAACATTTAAAAAATAATTAGATGAAAAGTTTTCCAATGTTTTTAGTAAC
TTTAGTCTTATTCAAATCAGTAAAGTTTTAAGTATAAAAGACTTTAGTGT
AATCATTTAGTCACTCTGGGCATCTGACAATAATGTTGATTTTTTCCCCC
TACTTTTTAATACACAGATTGTACAATAGTCAAAATGCCATATGCATATA
AATGCAGGTCTTTTGAAGATGTCTTCGATAAGTTCAGGGCAAGAAGCACA
ATAGAAACTCCATCATCCCTCAAAGAAAATGTAACTTCTGGTGAGTAGTT
CCGGATTACTGTAAGGGAATAAATTAATGTGAGAATAAATTAAGGTGGAA
TAAATCAATGTGGAATTAATTAATGCAAATTTGATCCTAATTCACATTAT
TAGATTCCGCAACACTTACAATTTTTGGTCATTCGCATTAATTATTTCCG
CAAAACATAAAAATTTTCAGCTTTCATTCGCATTAAATAATTCTGCATTA
ATTTATTCTTGCATTAGTTTATTCCCTTAAGGTAGGCAAGTATTGCCCAT
TTTGTGATTTTTTGCCAGAACCCCTAGGGAAAAAAATGGTAAAAATAAAT
CCCCACAGCAATTGATTAATTTTTAAAGTAGTTAGGTCCTTGAAATGGAA
ATTAGAAGTTTTACCTTAAAGCTCAATTCTTACTGAGACAACTTCTTCTT
TTTAATTATTCCAGCAGAGATTTTTTTCTACTATGGATTTCATATTTCTT
TAGAATCAATGTTCCAGCGAAAATATTTCTCTTCTACACCACCAGTCTTA
CTTCTTTCTATGGAATGGTTGTTGCAAAAGGTAAAATTTTTTTATTAATT
TAATAGCCAAGGAGAAACTCCTCAAAATGACAGATTTAGCAGATTTAGTG
TTTTGTATTATTCAAGTCATAAAATAACCCTGTCAAAGAAAATAAAGCTG
TCAGGATTTCTGGAATTTACAACTGGGTCTCCAAATGATACTATACATAC
TGAAGTTAACCATTCTTTTAATTTGACTAGGGTATGGTTCTTGATTCGAA
AGCAAAGCTGCCAGCTTATCTACTGGAAGATGTAGAAAACAGCTGCATGG
ACGAATACAGAATCAAAATGGTTGTTGTGACACATCAAAATCATTCGAAT
GTGTTAGTTCAATCGAATGACCTTGTTTGGTGAGTATGTTATTTGAGAAA
ATCAATGAAACATATGTATATTCATTATATACCTGTAAATAAATGACGCT
TCGCAATGTTGAATATTATTCATACCACCTTGGTTTAAAAAATCATGATA
ACCAATGCTTCTCAAATGTTTTTTCTATCCTCAAATGCGATGATGACATT
AAAAAACATTCTTCAACAAAAAACCGCTATTGTGAAAGTTTATAAAAGTG
AAAGGAGGTCTTTCTTACCCTGGGCTAGAAACCCAAATTTAAATGAAAAA
TAAAAATAAAAAAATAAATTGGCATATTTTTACATCAAAGAAATGCAGTG
AACACTGAGAACATTACAAATACATTTTCTCTAAAGGTATGGTGTTTTTG
GGACTTGACATTTTGCAAAAAAACATGAAAGATTAAATTTGTGTTCTCAG
TGTTTACAGGACTTTTTTGATTGGAATAAACGGGTCCTAAATATCTGCTT
ATTATTCTTTTCTTTAGGAGAATATATGGAAACGGAAAATTGAAAATAAA
GACCAAATTTCAAGAACTTTTACATTTTGAATGTGTTACAATCGGTAAGG
GTTTACTTTTGTTCAGGGACATTATTGTGTCCTAGCAGATTTTACATTAC
ACACTTTATTTTATGATAATAGGTTCTATAAGAATATAAGGTTAAAAATT
GCCTAAATTGTAAGGATATCTTAAGAATATTCCCAGCATGAGTTTCGTGT
AAATTAAGTTTTTGTCAAACACAAAATTATGGAAATCAAAATAAGACAAT
ATCTAACTAAAGATATGCCATGAAATAACCCGAGATGAGCTGGAGTTTTT
ACAAGATGCTTAACTGATTGGTTATTTCTAAACCATAGGGACGACGCGTT
CTTTAGGAAAAGTAATAAATACGTTTGTCTCAACATTTAACGATCAATAG
AGTCATCAAAGAGCTTGTAAAAACTCCAGCTTGACCCGAAATAACACAAT
GATACTAAAAATATATGCCTTAACATCAACATGTACATGGAAAGTTTAAA
CAGAAACTTTTTTCTGATCCTGAAAGATTATAATATTTTATTTTGCTAAA
TCATAAGAATACTTCACCGTCAATGAAAAACACTATTTTTATTTTATAAA
AAGTGCTTGTTTAAAGCTTACAGTGTTTCTAGAAAATACCCGAAAGTTAT
GTTCACTTTTATATATTTTTCTTTTTAGACTTGATCGTTTACAATAAAGA
TTGCAAGCTTTTAATGGCAGTCGAAACTGACCTTTTGGGAAATGGGAAGT
TTTTAATGGACAGGTAATCATTTTAAATAATTTAATCGTAGAATTTTATA
TACATTTATATACATTACATTTACATAGAATATTTCAACTTCTTGTAAAA
AGAACCAATATACTTTTGGAGATCAAGAAATTAATGGTGAAAATTAATAA
ATAAATAAATAGGTCTGACAGGTGGCTATTAAACTCTTCCTTTATTAGGT
TTCTTCTGGCATCCAAGGACAATACCAGATAAAAGGAGCTATAATAGTAA
TTAAATGTGTTTACGATATATAATTCTGTTAAGACGTTTGTTTTTCTTTT
ATTCTCTTGATTTTGTCATTTAGATTACAAGAAAGAAAACAATCAATGAC
AACAACAGCTAGTAAAGCTCTGGTAAGTTTATTACTGTAGTTTGTCTAAA
ATAACGCGATGCAGAAATTAAACATTTTGGAAGGCACACACAGAAAATGG
GACTGAAAACAATTATTAGATTTCCAATTTCAATTTCAATTTCATCCAGT
TACATCACGTGTTAATGCTCGAACAAAATAATAATTAATCGTTTCCTTGG
GACATCTAGATTAAATCTACCATTGAAGAAAGACAAAATTTGATGAAATG
AAATTACAATGTTCATAAAATTCTTTTCCCAACATTTTTGATGAAACTTA
GAAGAATTACCCCCATATTTTGTAACGTCAATCGTTTGAATGACAACATT
CGAAAACCCCATTATGCGTGATGTTTTAGACAAATTACATGTTTTTTTAT
AAGCATATGAAAATTTGAAGGTCAGGCTCGTCGATATGCTTTGTTCTTAA
ACAATAGATCTATTGTTTTAAAGGGTTTAATTTGGGTCTCAGTATGCTTA
TAAGTGTTATGATTATAACAAGAAAAACATGTATGGTAACACAGAGATTG
GTTGTTGATATTTCCAGATTTATTTTTCCAGAATTTTTGATACAATGGTA
TTTTAGATATTCTATTATAATATTGCTCGAGCTTTTTTAATGGTTTGTTT
TTAAGGAATAGGTGTCTCGTTACCACGTTGTTGACTTTAGGACAGTTCAG
TAAATTCAGTTAAAAGATATGTTAAATTTACACTTTTGTAGGGCTCTCAA
CATGGTTCAAAAGGAAAAGGTTTGTCTTTTTTTATTCTTCTTACTTAATA
AGTATAATATCTTGATAATTTCCTGTTTTGGTTTTCACCCCACGTAAAGC
AGTAACAAGGTTCTTAGAAACAACCCTAGTTGACGTGTTTCAATAATATA
CCTTGAGGAAAGTAATTTCGCAAATTTTGCCCTAATCTTCCGTAAGACTA
ATCACAAACAAGTAATTCTTGAAAATTTCTGTCCGTCAAATTTACTAAAA
ATGATAGAAAAGTCAAGCATATAGCACAAAAAGATAGTAAAAGTGAGCAA
ATACGTTTACTATCCAATAACAACTACTTTCCTTCTTTTTAGTCAAAAAA
TGGGTGAAGAAACATTTGATTTTTATTTAATTTGCGAAAGAAAATTATTT
TCGTGAAACTCAAAAAAGCACTTGATTTGCAAAGTATTCTTCCACGAAAC
ACAATTTTGGAGAGCGTAATAATTTGCAAATTAATTCTTCCCTTAAAGAA
CATTTATAGTACATCCGTAAATTAATAAATAATATATATATATATTTTTT
AGAAGACTTAGAAGGAATCATGAAACGACACCTCGGCACTATTTATGGTC
AGCAAAAACTGAAAGATCAAACCATGGTACTGGCAAGAAGAGCTTTTTTT
GACAAAAAACGGGGAAGATCTACAGACATTTCTCGCCTGCATATGCTGTT
TGTAGGAAACCCAGGAGCAGGAAAAACAATGGCTGCAAGATGCATGGCAG
GTAGGTGTCCCTACATTTTTATTAGTACTAGTAAATCGCATGTTTTGAAG
TACAATTATCGATTCACGAGTTACAAGGAGAAAATTGTAATTTGTCCGAT
TCCGTAGGACGAATATCGATTACCTTAAAGATACTAAATTTCGTCCGTAC
TAATTTTCGTGCAGAAAATTTGCGTTAAAGAACAAATTTAGTGAAAAATA
AATTCTTAAAAGAAATCTCTTAAATTTCTATTTTTTTGCCGACCGACCGA
CCCACATTTTGAAACTGCTTCGCCCGTAAAACAACAAATCAATTTGGACT
CGCTTAAATTCAATGAATAAAAGAGCTTTTTGAAAAATTATTTTTTTGTT
CTATTGAGTTTTGTTTCCTCTTTCACAACAAAAGAATTAAGGGGTCAAGC
CCAAACGTTAGTTCTCCTTTAAAGAAAATAGGTAAAAAATTCGAGTCTGT
GTTTGACATTTAAAGTGTAATTCTTCGGAAAGAACAATAACAGATTAATA
TTTTACTCAAAATCCTTCTCAACCAATGTGATTTGAGTAATAGTGATTAA
ATTTACAATTTCAAAATCAATGGGCTGTTTCAATTTCCTTTTATTTATAA
TCACTTTCAGGTATTCTTAAAGATATTGGAATTTTGAAGAAGGGACATCT
AGTGGAGGTTCAACGCTCCGAACTGGTGTCCCCCTACATTGGTGGTACAA
GCCAAAAAACAAAGGCAGTGTTGAAAAAAGCAAAAGGGGGGGTTTTGTTT
ATCGACGAAGCATACCGGCTCAGTTCTGTTGTTGGCAAAGATTACGGTAA
GGAAGCCGTCGAAACTTTGATGTCTGAGATGACGGAACCAGATTGCCCAT
TGATGATCTTTGCGGGTTACGAAAAGGAAATGATGGAGTTTGTCAATGTC
AACTCAGGCCTTCAACGGCGAATTAAACATAAATTCGCTTTCATTGACTT
TTCACCCAACGATTTGGAAACCATCACAATAAAAAAGCTGAGCTCTAGTT
TTCCACGCTTTCCACCATTCAAGACTGGAGAACTGTTAAACGAATGTTTT
CGGAAGCTCTCCAAGGAGGTAATTTCTAAGCACAATGCTGCCCTGTGCAC
CGACCTGATCGACCAGATCCAAACCGCTCAGGAATCAAGGTTGCCTCAGG
ACTGCTCTGACGCGGACCTTCGAAAAGTCACCGAGGATGACCTAAAGATC
GGCATTGAAGCTTTTTTAAAATGCCACGAAGTAAAACCAACGAATGAAAA
GTTGGACTCTGGGGATGGCGATATCAATGAGCCAGAGGTGTGTTGGAGAT
GTAAAAGAAGCATGAAAGAAGGCTCGGATGATGAATTTACACCACCAAGG
GTCGTTCCCGAAATAGTTGTGAATGTAAATGGCTAAAACGATTGAATTTT
ACTCGGCGTGTTGTGTTGAAATTTTGTTCTATATTTTATTTTAGGGTCTC
TTGTCTCTTTTGTTTCTTTGCGTGGAATTTTTGACCTCGCGAAACTTTAT
CTCGCGAAAGTTAATCCGCTTAAAGTATATCTATTAAGCTTTGATGTCTT
TTTGCAAATAATAAATAAATAATTACAACAGGAATGCCATGTTATATGCT
ATGCTATTTTCAGAGAACTGTCACCATTCTTGTACAGCGATGCCAGTTTT
TTTTGTAATTTCTTTTGTTTCTCATAGACAGATAAATTTACATTTCGTCA
ATTTGTATCCTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036628XLOC_036628Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058117-exon-scaffold_306-1575043694:95661..96617TCONS_00058117-exon-scaffold_306-1575043694:95661..96617Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:95338..95407TCONS_00058117-exon-scaffold_306-1575043694:95338..95407Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:94483..94622TCONS_00058117-exon-scaffold_306-1575043694:94483..94622Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:94080..94232TCONS_00058117-exon-scaffold_306-1575043694:94080..94232Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:93580..93670TCONS_00058117-exon-scaffold_306-1575043694:93580..93670Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:93228..93350TCONS_00058117-exon-scaffold_306-1575043694:93228..93350Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:92688..92764TCONS_00058117-exon-scaffold_306-1575043694:92688..92764Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:92339..92487TCONS_00058117-exon-scaffold_306-1575043694:92339..92487Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:91774..91850TCONS_00058117-exon-scaffold_306-1575043694:91774..91850Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:91055..91139TCONS_00058117-exon-scaffold_306-1575043694:91055..91139Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:90696..90744TCONS_00058117-exon-scaffold_306-1575043694:90696..90744Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:89949..89976TCONS_00058117-exon-scaffold_306-1575043694:89949..89976Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:89218..89412TCONS_00058117-exon-scaffold_306-1575043694:89218..89412Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1575043694:87504..88607TCONS_00058117-exon-scaffold_306-1575043694:87504..88607Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:95661..96617TCONS_00058117-exon-scaffold_306-1510915933:95661..96617Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:95338..95407TCONS_00058117-exon-scaffold_306-1510915933:95338..95407Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:94483..94622TCONS_00058117-exon-scaffold_306-1510915933:94483..94622Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:94080..94232TCONS_00058117-exon-scaffold_306-1510915933:94080..94232Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:93580..93670TCONS_00058117-exon-scaffold_306-1510915933:93580..93670Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:93228..93350TCONS_00058117-exon-scaffold_306-1510915933:93228..93350Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:92688..92764TCONS_00058117-exon-scaffold_306-1510915933:92688..92764Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:92339..92487TCONS_00058117-exon-scaffold_306-1510915933:92339..92487Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:91774..91850TCONS_00058117-exon-scaffold_306-1510915933:91774..91850Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:91055..91139TCONS_00058117-exon-scaffold_306-1510915933:91055..91139Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:90696..90744TCONS_00058117-exon-scaffold_306-1510915933:90696..90744Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:89949..89976TCONS_00058117-exon-scaffold_306-1510915933:89949..89976Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:89218..89412TCONS_00058117-exon-scaffold_306-1510915933:89218..89412Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1510915933:87504..88607TCONS_00058117-exon-scaffold_306-1510915933:87504..88607Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:95661..96617TCONS_00058117-exon-scaffold_306-1491911889:95661..96617Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:95338..95407TCONS_00058117-exon-scaffold_306-1491911889:95338..95407Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:94483..94622TCONS_00058117-exon-scaffold_306-1491911889:94483..94622Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:94080..94232TCONS_00058117-exon-scaffold_306-1491911889:94080..94232Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:93580..93670TCONS_00058117-exon-scaffold_306-1491911889:93580..93670Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:93228..93350TCONS_00058117-exon-scaffold_306-1491911889:93228..93350Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:92688..92764TCONS_00058117-exon-scaffold_306-1491911889:92688..92764Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:92339..92487TCONS_00058117-exon-scaffold_306-1491911889:92339..92487Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:91774..91850TCONS_00058117-exon-scaffold_306-1491911889:91774..91850Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:91055..91139TCONS_00058117-exon-scaffold_306-1491911889:91055..91139Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:90696..90744TCONS_00058117-exon-scaffold_306-1491911889:90696..90744Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:89949..89976TCONS_00058117-exon-scaffold_306-1491911889:89949..89976Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:89218..89412TCONS_00058117-exon-scaffold_306-1491911889:89218..89412Clytia hemisphaericaexon
TCONS_00058117-exon-scaffold_306-1491911889:87504..88607TCONS_00058117-exon-scaffold_306-1491911889:87504..88607Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_306supercontigscaffold_306:87504..96617 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.516833	0	0.236578	0	0.645672	0	0.740067	0	0	0	0.582785	1.71917e-08	0.350712	0	0.357474	0.995825	0	0	0.402994	0	0.801719	0	0	0.491184	0	0.00858437	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058117 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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