TCONS_00058242 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058242
Unique NameTCONS_00058242
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2708

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058242 ID=TCONS_00058242|Name=TCONS_00058242|organism=Clytia hemisphaerica|type=transcript|length=2708bp
GTGAAACTCCATCTACAGAGAAAGGAGGTAAATTATGGATCGAATGGAGT
TCACTAGAAGTCGTATACCAGTCCAAACGCTAAGCAAACGAATCGACGGT
CGACTCTCCAATGGTGCGTCTGCATCGAATACTAAACGGAATTCCGGTAT
CTTTCCGGACTACGACATGCAAGATGGTAGACTAAGCCACGAAACTGAAG
AGGATAGAATGGATTACGAAGAAATGAAACGTCTACGAGAGAAGGTTCAA
AGGCTAGCGGAGGAGAAACGTTTACTAGAAAGCTCTCTAACAGAAGTTGT
CCAAGAAAAGACGGTGGTCCATGCTGAACATCAAAGTACCGTTAATAAAA
TGTCCGTTCTCGAAAATGAAGTTCTGACGCTGAAACAACAGGTTGGAATT
TATCAAGAAGATTtaacaaaaacgaaaaagaagaacaatAAACTGAAAGA
TAAACTTGAAGAAGTCTCCGTATTACAGGCACACAACCAGACGCCTCCAA
CCAACACCTCCTTATTCAGTGAGCTAGAGATGTCAATGTCAGAAGCAGAT
ATGAATCTTCATCACCAGAACAACGTTAGCACGCCTTTAAAACATCAAAT
GTCAGATGATGAAGATGTTCCAGATATTTTTGTTACCACGCCTAACAACC
GTGATTTAAATAGGATCTCATCAGAGTTACGTGAAGTTTACCTGAAGCTG
ATCTCATTGAAACATAAACTAAAAGACGAGGATGATTCCGCGCGGACGGA
TAATGGCGaagattatgacgtcatcactgcTGACATGGTATCGAGGCTGG
TAGATCAAATCATTCATTTGATTCAAGAACGAATTTTGTCACTTGGGATT
ATTGACCCACGAACTGAAAGTCCAAGGCTTGGTTCGGAGAATGGGGACGA
GACATGTTCGTTACCAGACTCCAGACATTCTGATACTGAAGTTGAACTCT
TAGAACAACAATTAGTGGAGTTAAACCAACTTTTGAACGAGAAGAATACC
GAATGTGAAGACAAGAAAAAAGAATTACATGCTCTTCAAGCCACTGTTGT
TGTTCAGGAAGAAAAAGCTGACATCTTGGAAGTTAAGGCCAACAAACAAG
AGAGAGAAATCGAAGCATTGCGTTCAGAAAGAGATTTGTTGTTATCTGAT
AAAACGATGGAAGAAAAGTTGAAACAAGTTCTTGAGGAGAGAGATGAAGC
TATCAAAAGAGCGAACGATCTTCAAGCCCACGAAGAACAGCACACAAGTG
ACATGAAGAAACTGAACAATCAACTTATTTCAGCTGTACAACAAAAATTA
GAACTTTCTGAGCAGCTAGAAGAATGGCAGTTTGACATGGCTTCACTGAT
CGATCAACAATTGACGTCACAAATCAAGAACGAACAAAAACGTTCGAGAA
AGCGAACAAACAGTGGTAGTCAACAGCAAcagcagcaacaacaacaaaaa
gtcaAGTCTTACTTAACCAGATTCTTTTCAAGGAAAAATAGTAATGCAAA
TAGCAAGGAACCGAGTCGAACCAATACACCGAACCTTCAGTCCCCTGTTC
CACCAAAATAAAAGCTTGAGCTGGATGTTATGATGGAGAATGACTGCTAC
CGTTTTAAAGAAGTTTGGTTCTTGTTCTATGGTGACAGATCACACGGGAG
AGAAAAATCGCTCGCTTGTCGATAAAACTGTATCGACGGATAATGCTTCG
AGCAAAATAGATGGTATGTTGGTTGGAATATCCATTCGTTGAGGATTCCG
TTCTGCAGGCGGATAAAGGCTTTTCTCTAAACCTATACAGAACCGAAAGA
ATATGGTATTTTTGGCAAATAAAAAGGATTTTCTCATGATGAAAACAATC
ATGTAAGGACGTAACAAAGACAACCAGGGTTGGTAAAAATCACACGTCAT
TGCTTGTTGACATCTTTTTAACGTCTTGTTGACATCCCTTGACGTTTGGA
TATTGTTACCTTCAAATAGCACCATTAAATTATAAAGggaaagtgaaaat
tttgaaagatgacATTTTTAAAATGACATTGAATATCTTTTGCCTGAAAA
GTCAGATCAGTGAAAAGCGAAAACAAAAATGACAATGGAAAAGACATTGA
GAAGGAGCTAGATGCCCGcttgaaaagtttaaaaatgtataaagttttaa
ttttttgaatattcaTCAGTTCTATTAAAATTATGTCGCCGGTGAACCTT
AATCTAGGTACCCAAACTCGAACTCAGTCTTATAGCtcgctttttgataa
ttctggATAGCACTCACGAAAGTTTGCAAAGTGGTGCAAtgggctctggg
tacgagattgtcAGGGTAGCTTACCTGATAAAGGAGGGGTGATACCCCAT
TTGTAATAAAAAAGTTAGAATTCCAACAATCAAAGACTGTTTGATTTTCT
CTGAAATTTTGATTCTACACACACATATACTGTATATTGTTTGACCAGAT
TAAATTTTGACTTGAGTTTTAACGCTTTTAAGTTCGTTGCGTTCCTTCAT
TCCCCAACTATCAAGAATAATGTTTGAGTCATCAAATTTGCTAGGAAAAT
TGTTTTAGGCTACATACattttttattggaaaaattatttggttttttgt
aaatatgaaatacgaaaaaattgtatttattgaattttattgcttttttg
tCACCCTCATTacattatttcttattttttgtataagaaaatcTGATATT
TATTAACT
Run BLAST on NCBI

transcript from alignment at scaffold_309:493519..506220+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058242 ID=TCONS_00058242|Name=TCONS_00058242|organism=Clytia hemisphaerica|type=transcript|length=12702bp|location=Sequence derived from alignment at scaffold_309:493519..506220+ (Clytia hemisphaerica)
GTGAAACTCCATCTACAGAGAAAGGAGGTAAATTATGGATCGAATGGAGT
TCACTAGAAGTCGTATACCAGGTGATGACCTTTGTTTACGTGACCGAAAG
AGAAACGAATCGATATAGTTTGGTTTTGGGAGAGAATGGCTGCACTGACA
TCATTAAAATATTGTTTCTGTCTATTTATTTGCTTTTCCTTCTTCTATCT
CTGTGTGTTTTCCTTTACTGCccatctgtctgtctgtctgtctttctttt
tattgattcttgATATCCCAAGAGAATCATCTACTTAATTATCGATTACT
GCTGATTGCACCAGCAGCTTCTTGTTTTCCCTTCGACGTCTTTTCAATGT
CTGTCCTACGTTCGTGACGTTCAAAACGTTTATACAACATTAAATGGACG
TTTATACAACATTGTATGCCGTTTGGGACATCACTCTGGTTTGTTTACTT
TGATTTCTCCAGCCATCTCTCCCAAAACCACCCTTTCGTTTCTCACGCCC
TTATGCCTCGATTATTATTCATCAATTCAGGTTAAAGCCTATAACGCGGA
ACTGGCTAATCAAGTCCAAACGCTAAGCAAACGAATCGACGGTCGACTCT
CCAATGGTGCGTCTGCATCGAATACTAAACGGAATTCCGGTATCTTTCCG
GACTACGACATGCAAGATGGTAGACTAAGCCACGAAACTGAAGAGGATAG
AATGGATTACGAAGAAATGAAACGTCTACGAGAGAAGGTATCTAAATATG
ATTTTTCGTGAAATATTGATATACAACAATAGTTGaattatattgagaat
tttgtgtattttaaacgtttttcaaaattttgagttgGGGTGAGAATCGC
CATTTTAGTATACTTCAAATTTATAGTACTGGTATTTGGACCTGGCATTT
GGACCTTGAGAATGTAGTctcgcggtcaggcgcgtgccactttattattc
aatTATTCCTCTAAActtgattcaatttttttaatacctttttctattgt
ctataggtgctaAAAAAAATGAACGGGATGGTTTTAAGGACAAAAAATTA
CCCGtgtggcaattggcggctacggtcgaaaagttgTATAGGCCTAATTT
TTCatccttttcttcattttatagGTTCAAAGGCTAGCGGAGGAGAAACG
TTTACTAGAAAGCTCTCTAACAGAAGTTGTCCAAGAAAAGACGGTGGTCC
ATGCTGAACATCAAAGTACCGTTAATAAAATGTCCGTTCTCGAAAATGAA
GTTCTGACGCTGAAACAACAGGCTAGTACAGCTatcttctttttaataat
ttgagAGCTGGGGAGAAGTGTCGCTGTCTTAATGGTGTAACATGATTGCC
TCCATGGTGTAGCGTAATTGAAACAAGGTGTTAGACTCCTTAAACCCCAG
ACGGCTCCACCGACAGCAACCAATTGAACAAATGCCTTTACGCTTTAGAA
TGGTTTTCGTACAGCGTGCAAAATATTTTCGCAAAACTCAGTTCTCCTTT
TAACTTTCGAGTAAAACATACAGTTGACGccctctaattcgacgttctac
tattcgataggcttccttattcgatgaaatttgaagttcccgtcaacaag
aaacaagaaaaaacgacgctcccttattcgataaactctcttattcgatg
aatATCCAatttcccttgaagatcgaattatagagcgtcaactgtattta
ctTCATCATCCATGTTCAGGTTGGAATTTATCAAGAAGATTtaacaaaaa
cgaaaaagaagaacaatAAACTGAAAGATAAACTTGAAGAAGTCTCCGTA
TTACAGGTAAGCCTATCCTTAGgattttttcaattaaaagataGAGTCAT
CAAGATCGAATACGGCTTGAGAAAATCTATAAGAACACGAGCCCTTGATG
GGCAAAATACTCAGAACAAGTTAAGtacattctaaggctttttggactct
aaaacatccaatCTTTAGAAAATTGCACAAATATAATGATATAATGGTGG
AATtaagtcaaaaagttaagaacattcacgaaggcttcaacaattttgaa
tgttcttataaaaaacatgtatcttcCAATATCTGTTAAAATCTTTCGTG
GGATGCAACCCGCACGTGGTTGATCAAAAATTGAGAGGGGCCTTGTTACT
AATTATATCACCATGGTAATTTGGCAGCCATTTTGATTAAAGATTTGGCA
CGGAGGAAATTTTGTAATAACTTCCTTAGAGATACTGTGGTGATTAATCT
TCAGAAACTCGTAAACAATGGAGGAATTCGTCAATCTATCGTAATTTGAA
AGAAGTTATGATAAAGTAGTCATATAAAATCAAGTTTTTATTGGGTTCAG
AACTTAACAAGTTTTCTTGACAAATCTTGGCCCTGAGACCAAAAATCCTT
GAGAAGGTGGATATGCacgtttttaataagaacaaactatataagaacat
aaggcttcgaaataagaacatgttaagaacatttttaggcttgaagcCCA
AAAAGTTGAACATCCTAAGGctaaaaaaatttggatgttcttataaaaaa
aacctatatttgataaaaatttgaaaccaaTAAAGTTGTTATCGGGTTCA
GAACTCAACAAGTTTTCTTGGCAGACCGAAGCTATATTATTTTTGGTCGA
CCCGAACTGGGGACGCAGCTGAAATTCTCAAAATGTTAGCCCAAGATTGC
GGTTGCCCATAAGAAATTTAGTATGTGTGGCTTTGTAAAACGAAAGCCAT
ATCACTTTTTAATAATTCTTTGATTTTGTCACCTGATAAAACTCATTTTC
TCACGTTATTCTATGACAACAATATTTTCCATTTATAGAGATTAAGTCAT
AAATCATTTCAGCGCATCTCTATACTTTATATAGTTCATAAAACTTTCAA
GTTATCATTTAAGTCTATGAAAACTTGAACCTTGGCGATTTTAAGTGATG
TAATCTACTTGATTTAACGAGAATCTTTAGGCAATTTTATGGGACGCCCT
CCTCTCGATTAAAATTGAGCTTTTAGAGGGTATTAAAAAACATGAAGGAA
TTTACATGACATTAATCAACTGCGTGTTTAAATGTTAAGCTACCATGTTT
GTATTGTTTATTAATTAGCCTGCAATTTTGTTTTGACATGACCACTCTGT
TGTTAAGCACTAAATAGAATGTTATTAATTTTTTGATGGTAttttaattc
tcttttttttcctctCTGATGTGTCTGATGTGATGTTATCGGgatgttat
attatgctgagaCGGAGAAATGTTTTGAgaaatgtcgactttgctttTGA
CTTATTATGCGTTTTAGATGATATTGCTTCAACCTTTACAAAATTatgta
tttttagttttttatgttaaaggttttgttaaaaaaaaagagtgatatcg
tttgcttactcttcaattttaattcacaagcttaaatttctcaattggat
tgacacagatgtggggCAAGAAAGAAAGAGGAAAGAGGaataaacaacat
tttttgcttatatcagcataatattgTACTGTTTATAATTTCTTAATAAT
GTCACTTGTATTTTTTctcattcttttttttgttgtttatttatcGTCAA
AGTTGCAAATAATCGAATatcataataaataataaagaaaacaaaaacac
aaaGCCAAAATGCGAATGCCAACAGAGGAGGTATTGTTTGTGATATGTAT
CTTGTGGAGGTGTTAATAGTGTTAAtaccagggtggtctggaaaatgaaa
attcaaggGGGTTCGGTTTTTCGAGTGTGAAAATGGTCAGTAAAAtaagg
ttgaaaatccagggtgttCAGTAAAACGAGGTTAAAAATCCAGAATTCCA
ATAAATTAGAAGAAAATTCCAGGGGGGCTCtactttccgaaaaaaacttc
ctcaacaacaaaaataattttgaaatagtcttttaaaggttttgtctagg
aatctacacattttttaagaacattcaaaaactttaaaacctccaggtgt
tcttaacttttcaagtttgaaaccttaaaatgttctgaaattTTAATATC
ACCATTTTCTtagtgcacgtttttttatgagaacacaGTCCAATTTCCTA
ACAAATAGGGTGTTTTAGaatctttaaaatgttcttaacttgctcttaat
attttagccatcgaagccttatgtttttagatagcttgttctcataaaaa
aaacttttaccttGCACCTGACTCTCTCCTTCTACCACTCTCCAAGAAGT
GAAATAAATAATCATTTAAAAGTGAATCCAAAAGTAATACTTAACTTTTC
TTTCATCTGCAGGCACACAACCAGACGCCTCCAACCAACACCTCCTTATT
CAGTGAGCTAGAGATGTCAATGTCAGAAGCAGATATGAATCTTCATCACC
AGAACAACGTTAGCACGCCTTTAAAACATCAAATGTCAGATGATGAAGAT
GTTCCAGATATTTTTGTTACCACGCCTAACAACCGTGATTTAAATAGGGT
AAGTACCTCACCAAAAgccgggatttttcattcccTACTGCCAAGGTCTT
CGAAAGAAACCCAAAAACCTGGcctccaaacattcgaaaaagtggAATCT
GGTGAAATAGACATTACATACAACGTAGAAAAAAGCTGTGACGACTAGTA
AAGGCTAGGGTAAGTTGAGATTTTCAGCGGTGCGCAACCTGGGCAGATTT
TATTACGGAACCATGGCTGGAGTTAATACTTGTCATGCGCGGTGTATCAT
GATCCGCTACGTCGTCGCAACATACACcaaacgttatatggacgttgtat
TGTTGTTTAGTGTGTAAGCTGGGATTTGGAACTAGTGTATAGCATAGCCC
TTTAACTTTTAACTACATGTAAAGGAGACTCAGACCAGCTTATTCGTAGG
TAAAAAAAACCTCCCTGACCTCTTCAGCTTGGCCCCCGCTTGGCCTTTTT
TTTAATACTTCGatagtctgaatcacagacccCTACATAAACCACATGTA
ATCTATAAGGAGGACGAATCCGTTAGTGAATGCTAGCAGCCTTAAACTTT
GACGAATTTTCCTTTAAACGGCATAACGTAAAGTATCAGCTCTTAGCAAA
CAAACTATAGCCTAAAAAAACCTAGTCCAGGTCTAGAGTCGATGACTGTT
ATTCCTGTTTCCCTGATTTCGCTGGTTAAGAATCCTGTCAGTTTCAAATA
AAACAGATTTTCAATTAACCATGATCAacccaaattgaaattttttggtg
tcTCCTAAAGACGTcttactttttttagttttctcacTCATTTTCACTTC
TGTTATCCAACAGATCTCATCAGAGTTACGTGAAGTTTACCTGAAGCTGA
TCTCATTGAAACATAAACTAAAAGACGAGGATGATTCCGCGCGGACGGAT
AATGGCGaagattatgacgtcatcactgcTGACATGGTATCGAGGCTGGT
AGATCAAATCATTCATTTGATTCAAGAACGAATTTTGTCACTTGGGATTA
TTGACCCACGAACTGAAAGTCCAAGGGTAGGTTTATTGGTGTAAAATTCA
TTTTCTGAAAGCTCAGATTCAGGAATAAACTAACTCTACTACTACACTGG
AATCGTTTATAATTCATGTAATACAGTGTTATTGTTGTTATATAATAATA
CAATAATCGTAACGagataatatcagtttttatACTATAATTTGTTCTTT
ACATAGTTTTTGCTTATTTCCTACTACGACCAAATTAATTGTCTAGCATG
TTAGGACTACCCGACTACCAAAAAATCAATATAATTGCGAGAATAATTAa
aacgaaaatgtttgaaattttctggtaTTCATTTTTTTATCTATGAGTCA
TAGTCTGTGTATGAGCTATTAAATAAATTGACTGAATATGCTTGTTTCCG
ACGGATTTCGAGGAAATTACATATTAATCCTCAGCCTTCCGATTGACACA
AATTATCTTcgcttgaaatcaaaatttcctaaattcTCCACATACTTTGT
CAGAGTGTGATCTTTTTCTTCCCATTTGATGACTTTATAATACAAATTTT
ATTTAAAGCAATTGACACATATATCAGCTCATAGTATTCTAGGAAATCTA
AACCGGCCTTAGTATGTTCCTTATAAGTTAATATCTTTCTTTTCcctttg
aaaacatgatttacaGCCTCTTAAATTCNaataatatctttcttttctct
ttgaaaacatgattttacAGCCTCTTAAATTCCAATTTAATATTGTAAAA
GTGTTCTAAACTGTCATAAAAAATTGGTTTCGCGAATGTAGCTATTGTTG
CAGATtgttgggctattccagaaaaaaaatgtacTCCTTATGTTGAAGAG
GTCTTTAGTGGGAAAGGTGACCTCCTggaatttttttcccaattttttaa
GACCCccttttggaccaccctggattttcgacctcgttttGTTCACGATT
CATgattttcaacctcattttacctaccaccctggattttctaCCTAATT
TTCATttaccaccctggatttttacactcgaaaaaccaggcccccttgga
tttttaatttttcagaccaTCCTGGACgacacacctcctcaacataaggG
TGCAAACtaactatttctggaatagctgAAATAGCCCACCATAACTTTGG
TactatttataacaaaaatctTTCATAAACCCATTGTTTTAATGACTgaa
atgttttgttcttttccAGCTTGGTTCGGAGAATGGGGACGAGACATGTT
CGTTACCAGACTCCAGACATTCTGATACTGAAGTTGAACTCTTAGAACAA
CAAGTAAGATAACTTATATCTACCATAGCCCGCCCAGTTTAATCTGGATA
ATGTTTTTTCACAAGAATCAATTCCAAGATCCTTGTCAAAACTTCGTTTC
CTTGTACCAGATAGTCGTAGACAAGTTCCTGATCGCTAGACTAGATCCGG
ATTTCTCTTTTTACTATTTGTGGGGATTTGAAACTGCTTTTCATAGTATT
CATTCAGATTTTAATATTCATATTTACCATCACACAAACGCCAAACTTCG
AAAATTATGGCGcgtgaaaaaaaacattcaatcgTCATTCCAAAAACAGA
ATAAATCtcaaggtttcactttttttgcttgtgaataaggttaaagattt
ttttctagatTCCGGATCCCTAGACTAGGTATAGATCTCTCTGTTAAAGC
TATTCCTGGAGGgaatattgaaaatataacTCATAAGTAAggaagtctgc
gaccgcagtcggaggcgacccgaaggctcctctttcgatagctatctacc
cgaaggtaggggagggcgccactctttctccctggattgttcCATTTACC
CTTGAactttctcttaattgctgagcatcaagcagagaggcatcaagtac
cattttgggaatctttggtatgacccggctgggggttgaacccaaacctt
gcgcaccgtagcgggatgctctaccactgcactacggtcgctcaTACATC
ATAACTCATACATCCATTcaagttttctttcttttttcttttccttttag
TTAGTGGAGTTAAACCAACTTTTGAACGAGAAGAATACCGAATGTGAAGA
CAAGAAAAAAGAATTACATGCTCTTCAAGCCACTGTTGTTGTTCAGGAAG
AAAAAGCTGACATCTTGGAAGTTAAGGTAGCTTGTTTAAATATCGTTTCT
GTtttacacacccctgtctcgtaGCCTCGGTAGAAGTTTTTCtctcagtt
ttttttttcactcttttTCTTGGCGTCATACAGCGACATTAGaagggggg
ttgtacttttacggtgtgacgggattggccctattttagtacggtattac
gggactttacgaaaaaagagacgagaaaacggtattttaaagtCAGACAT
TGACGGTATTTAGCCTTACTTTTTGTCATTATGTCAGTATTTTAATctct
acaaaccggtgtgacggtgttattttttttaattttcgggattccgggat
tcagcaaaaattttgaaccTCCTACAAACCCCCCTTTAGAAGATTTATCA
TAACGATATTATTTTATTTGTCCCTTAGGCCAACAAACAAGAGAGAGAAA
TCGAAGCATTGCGTTCAGAAAGAGATTTGTTGTTATCTGATAAAACGATG
GAAGAAAAGTTGAAACAAGTTCTTGAGGAGAGAGATGAAGCTATCAAAAG
GTAATGGAAGAGTTAAATCGGATTACTGAAATTCACCTGTTTCATTTCCT
ATCTCTcatcctatttttctctttcctGACTGGTGTCTGAAACAGCCTAA
CTAAGTTTTTAATTTATGATACCTGCAACTCAtatttcgaccaatcaaat
tatACCCAAGGGTTCTAGGTTTAGGAGGTGACGGgcatgtccgagccgaa
aatcggaAATCGACCTTTTGACATTTATGAGACCCTTAAGAGacttttgc
caaagattttCAACAAATCATGAACCATGGAGAGGGAAATTCACGATTTt
tgtgaccctttgagagactagcCTATGAATATGTATTcctttgagggact
tttgaCAAAGACATACCTGTCACTTGTTTTGCCTAAGTATATTTTAGGCT
GATATTATTTGTGTctatgaaaaagtcaaaatcaaattttcagtAATCTT
GGAGACAATCGTTCCTTGTAAACCTATCTTCCTCATCATTTAAGGGCTTA
TGGGTGTATTTTTATTACGAAGACTAAATTTTAATTTCCACTTCACCGAT
AGAGCGAACGATCTTCAAGCCCACGAAGAACAGCACACAAGTGACATGAA
GAAACTGAACAATCAACTTATTTCAGCTGTACAACAAAAATTAGAACTTT
CTGAGCAGCTAGAAGAATGGCAGGTATGTGTCATTTTTTATTCATCTCTA
AAAACTCGGTATAGCAAATACCTCACACAAAAAAGTACTCTGATATCCCG
AATAGTAGGTGGTCAGAATAAACAGGGGGGTCCGAAGTTTTACTCTAAAC
CCTGCCCTCCTACCCCCATCCAAAGAAATTATAGAATACGGTAACTATAA
GCTACAATCAATTTATTTAGAGCAATTCAGCTTGcgatagctgaaaatat
ttttaaaaataagatgGAATATTATtgagcgggggggggggggggggtta
tttTAGACCATATAGTAATATATTTTTCCTTGTTACTGTGAAAGGAAAAA
TCGTAAACGCTAGTGTGAGCTATATCCGGAAAAAAGGGGTATGAATAAAG
CGTACACTATGTGttcacgtttttttctttttcttcactcgctgaaaatt
tttgaaaatacactGAGGTATTAACCTaaaattttgacactttttaaCAG
TTATTTTTTGACTATGATTTAGGGAGAATTTGTTCATGAAATAATCTTTA
CTTCTTCCGCCTCTACAGTTTGACATGGCTTCACTGATCGATCAACAATT
GACGTCACAAATCAAGAACGAACAAAAACGTTCGAGAAAGAGAACAAACA
GTGGTAGTCAACAGCAAcagcagcaacaacaacaaNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc
tcagttttttttttcactcttttTCTTGGCGTCATACAGTGACATTAGaa
ggggggttgtacttttacggtgtgacggaaTTGGCCCtattttagtacgg
tattacgggactttacgaaaaaagagacgagaaaacggtattttaaagtC
AGACATTGACGGTATTTAGCCTTACTTTTTGTCATTATGTCAGTATTTTA
ATctctacaaaccggtgtgacggtgttattttttttaattttcgggattc
cgggattcagcaaaaattttgaaccTCCTACAAACCCCCCTTTAGAAGAT
TTATCATAACGATATTATTTTATTTGTCCCTTAGGCCAACAAACAAGAGA
GAGAAATCGAAGCATTGCGTTCAGAAAGAGATTTGTTGTTATCTGATAAA
ACGATGGAAGAAAAGTTGAAACAAGTTCTTGAGGAGAGAGATGAAGCTAT
CAAAAGGTAATGGAAGAGTTAAATCGGATTACTGAAATTCACCTGTTTCA
TTTCCTATCTCTcatcctatttttctctttcctGACTGGTGTCTGAAACA
GCCTAACTAAGTTTTTAATTTATGATACCTGCAACTCAtatttcgaccaa
tcaaattatACCCAAGGGTTCTAGGTTTAGGAGGTGACGGgcatgtccga
gccgaaaatcggaAATCGACCTTTTGACATTTATGAGACCCTTAAGAGac
ttttgccaaagattttCAACAAATCATGAACCATGGAGAGGGAAATTCAC
GATTTttgtgaccctttgagagactagcCTATGAATATGTATTcctttga
gggacttttgaCAAAGACATACCTGTCACTTGTTTTGCCTAAGTATATTT
TAGGCTGATATTATTTGTGTctatgaaaaagtcaaaatcaaattttcagt
AATCTTGGAGACAATCGTTCCTTGTAAACCTATCTTCCTCATCATTTAAG
GGCTTATGGGTGTATTTTTATTACGAAGACTAAATTTTAATTTCCACTTC
ACCGATAGAGCGAACGATCTTCAAGCCCACGAAGAACAGCACACAAGTGA
CATGAAGAAACTGAACAATCAACTTATTTCAGCTGTACAACAAAAATTAG
AACTTTCTGAGCAGCTAGAAGAATGGCAGGTATGTGTCATTTTTTATTCA
TCTCTAAAAACTCGGTATAGCAAATACCTCACACAAAAAAGTACTCTGAT
ATCCCGAATAGTAGGTGGTCAGAATAAACAGGGGGGTCCGAAGTTTTACT
CTAAACCCTGCCCTCCTACCCCCATCCAAAGAAATTATAGAATACGGTAA
CTATAAGCTACAATCAATTTATTTAGAGCAATTCAGCTTGcgatagctga
aaatatttttaaaaataagatgGAATATTATTGAGCGGGGGGGGGGAGGG
CGGTTATTTTAGACCATATAGTAATATATTTTTCCTTGTTACTGTGAAAG
GAAAAATCGTAAACGCTAGTGTGAGCTATATCTGGAAAAAAGGGGTATGA
ATAAAGCGTACACTATGTGttcacgtttttttctttttcttcactcgctg
aaaatttttgaaaatacactGAGGTATTAACCTaaaattttgacactttt
taaCAGTTATTTTTTGACTATGATTTAGGGAGAATTTGTTCATGAAATAA
TCTTTACTTCTTCCGCCTCTACAGTTTGACATGGCTTCACTGATCGATCA
ACAATTGACGTCACAAATCAAGAACGAACAAAAACGTTCGAGAAAGCGAA
CAAACAGTGGTAGTCAACAGCAAcagcagcaacaacaacaaaaagtcaAG
TCTTACTTAACCAGATTCTTTTCAAGGAAAAATAGTAATGCAAATAGCAA
GGAACCGAGTCGAACCAATACACCGAACCTTCAGTCCCCTGTTCCACCAA
AATAAAAGCTTGAGCTGGATGTTATGATGGAGAATGACTGCTACCGTTTT
AAAGAAGTTTGGTTCTTGTTCTATGGTGACAGATCACACGGGAGAGAAAA
ATCGCTCGCTTGTCGATAAAACTGTATCGACGGATAATGCTTCGAGCAAA
ATAGATGGTATGTTGGTTGGAATATCCATTCGTTGAGGATTCCGTTCTGC
AGGCGGATAAAGGCTTTTCTCTAAACCTATACAGAACCGAAAGAATATGG
TATTTTTGGCAAATAAAAAGGATTTTCTCATGATGAAAACAATCATGTAA
GGACGTAACAAAGACAACCAGGGTTGGTAAAAATCACACGTCATTGCTTG
TTGACATCTTTTTAACGTCTTGTTGACATCCCTTGACGTTTGGATATTGT
TACCTTCAAATAGCACCATTAAATTATAAAGggaaagtgaaaattttgaa
agatgacATTTTTAAAATGACATTGAATATCTTTTGCCTGAAAAGTCAGA
TCAGTGAAAAGCGAAAACAAAAATGACAATGGAAAAGACATTGAGAAGGA
GCTAGATGCCCGcttgaaaagtttaaaaatgtataaagttttaatttttt
gaatattcaTCAGTTCTATTAAAATTATGTCGCCGGTGAACCTTAATCTA
GGTACCCAAACTCGAACTCAGTCTTATAGCtcgctttttgataattctgg
ATAGCACTCACGAAAGTTTGCAAAGTGGTGCAAtgggctctgggtacgag
attgtcAGGGTAGCTTACCTGATAAAGGAGGGGTGATACCCCATTTGTAA
TAAAAAAGTTAGAATTCCAACAATCAAAGACTGTTTGATTTTCTCTGAAA
TTTTGATTCTACACACACATATACTGTATATTGTTTGACCAGATTAAATT
TTGACTTGAGTTTTAACGCTTTTAAGTTCGTTGCGTTCCTTCATTCCCCA
ACTATCAAGAATAATGTTTGAGTCATCAAATTTGCTAGGAAAATTGTTTT
AGGCTACATACattttttattggaaaaattatttggttttttgtaaatat
gaaatacgaaaaaattgtatttattgaattttattgcttttttgtCACCC
TCATTacattatttcttattttttgtataagaaaatcTGATATTTATTAA
CT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036696XLOC_036696Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058242-exon-scaffold_309-1491911889:493519..493589TCONS_00058242-exon-scaffold_309-1491911889:493519..493589Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:493519..493589TCONS_00058242-exon-scaffold_309-1510915933:493519..493589Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:493519..493589TCONS_00058242-exon-scaffold_309-1575043694:493519..493589Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:494083..494255TCONS_00058242-exon-scaffold_309-1491911889:494083..494255Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:494083..494255TCONS_00058242-exon-scaffold_309-1510915933:494083..494255Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:494083..494255TCONS_00058242-exon-scaffold_309-1575043694:494083..494255Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:494643..494789TCONS_00058242-exon-scaffold_309-1491911889:494643..494789Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:494643..494789TCONS_00058242-exon-scaffold_309-1510915933:494643..494789Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:494643..494789TCONS_00058242-exon-scaffold_309-1575043694:494643..494789Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:495238..495324TCONS_00058242-exon-scaffold_309-1491911889:495238..495324Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:495238..495324TCONS_00058242-exon-scaffold_309-1510915933:495238..495324Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:495238..495324TCONS_00058242-exon-scaffold_309-1575043694:495238..495324Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:497831..498016TCONS_00058242-exon-scaffold_309-1491911889:497831..498016Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:497831..498016TCONS_00058242-exon-scaffold_309-1510915933:497831..498016Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:497831..498016TCONS_00058242-exon-scaffold_309-1575043694:497831..498016Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:498832..499044TCONS_00058242-exon-scaffold_309-1491911889:498832..499044Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:498832..499044TCONS_00058242-exon-scaffold_309-1510915933:498832..499044Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:498832..499044TCONS_00058242-exon-scaffold_309-1575043694:498832..499044Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:500238..500321TCONS_00058242-exon-scaffold_309-1491911889:500238..500321Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:500238..500321TCONS_00058242-exon-scaffold_309-1510915933:500238..500321Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:500238..500321TCONS_00058242-exon-scaffold_309-1575043694:500238..500321Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:501069..501194TCONS_00058242-exon-scaffold_309-1491911889:501069..501194Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:501069..501194TCONS_00058242-exon-scaffold_309-1510915933:501069..501194Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:501069..501194TCONS_00058242-exon-scaffold_309-1575043694:501069..501194Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:501597..501718TCONS_00058242-exon-scaffold_309-1491911889:501597..501718Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:501597..501718TCONS_00058242-exon-scaffold_309-1510915933:501597..501718Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:501597..501718TCONS_00058242-exon-scaffold_309-1575043694:501597..501718Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:502271..502313TCONS_00058242-exon-scaffold_309-1491911889:502271..502313Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:502271..502313TCONS_00058242-exon-scaffold_309-1510915933:502271..502313Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:502271..502313TCONS_00058242-exon-scaffold_309-1575043694:502271..502313Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:504220..504297TCONS_00058242-exon-scaffold_309-1491911889:504220..504297Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:504220..504297TCONS_00058242-exon-scaffold_309-1510915933:504220..504297Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:504220..504297TCONS_00058242-exon-scaffold_309-1575043694:504220..504297Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1491911889:504843..506220TCONS_00058242-exon-scaffold_309-1491911889:504843..506220Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1510915933:504843..506220TCONS_00058242-exon-scaffold_309-1510915933:504843..506220Clytia hemisphaericaexon
TCONS_00058242-exon-scaffold_309-1575043694:504843..506220TCONS_00058242-exon-scaffold_309-1575043694:504843..506220Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:493519..506220 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.83509e-05	4.24273e-05	0.119865	0	3.28713	3.65502	2.55285	2.27425	1.84699	0.154233	0.0468973	0.674825	0.00982957	0.0595282	0.508413	0.00708959	0.246656	1.00381	0.0396368	1.58648	0.000125293	0.00022613	6.45879e-05	2.73022e-05	0.739038	2.4549	0.000494421	1.1518	2.05008e-06	3.60763e-05
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058242 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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