TCONS_00058249 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058249
Unique NameTCONS_00058249
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1883

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058249 ID=TCONS_00058249|Name=TCONS_00058249|organism=Clytia hemisphaerica|type=transcript|length=1883bp
GATTTTCAACTCTCTAAGAACCTTGGATTTAATTTTAAACGAATCATTCT
ATCTGCCTTCGATAGCACTCTTGATGATAGTACAATCTTTTAGAATGGAG
TTTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACGAA
TGCTTCATCTTGCCCAACTCGTTCCAATGTTATCACATTCGATGACATCA
AACACTCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTT
ATTGGCGCTACAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGA
AGAAGAATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATC
ATGGAAACACAAGAATGATCATTTTCAGAGGAACCGACGGACTCACCCAA
CTTCTACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAATCAATTA
TGGACAAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTTTTGAGT
TGGTTTACCGGTACACATTACCGTATATTCAAGATCCGAAACGGAAATAC
ATTATCACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGATGGCAAT
AAAGGGAGCTGTTTATCATAAATCTTTATTGGCAAACCCTCAATCGAGTT
TGATAACATTTGGTCAACCACGAGTTGGTGATGCAGCATATGCTAAACTC
CATGATCAAATGGTGCCGACATACCGAAAAATCAGAGTAGTTTTCATGTC
TGATCCTGTCACTAAACTCCCTCCTTATGTGGCTGGATACAGACATCATT
CTAGAGCTGTATATTTGGGTCGTGGACTATTCAGTTTTTGGGGTAAGAAG
CGAAGCCTGGTAGAACAAGAAATCCAAGACGAAATTGCAGACCCTGACTT
TGAAGACAACGTCGATTCCGCTGATAATGATTACATAGAACCAAGAAGTA
AACGGTTTTTCTTCCCAAAGAGTTATTATATGCAAGTCTGTGGAAAAGGA
GAGGCTAAATCATGTGTCGTCCATCTCAATTCCATTGCTCCAAACCTTCT
TCATCACGCCATGTTGTTTTATAGTAACGCTTTGGAAAGTTCAAGTCTCA
AATTTTGGACTATCAAAAGTGAACGAAAATCAAGTTGGGAAGATGCTTTT
ATTGCAAGCTGTCATGGAGAATAACTTTCACTGGATCCCTTGGATGGGGC
TGaaatcatacacgtttttttataagaacatccaaaatttttgaagcctt
cggatatcCTTAACTTTTTAGGTTAtaagtcaaaaaattttcgtaaaatg
ttcttattttctcccttttgtgaccattttgacACATTTTCCTAAAGAAT
CGGGTTttttcgagtccgcaaagcctataaatgttcttatcttgttctta
gcattttggccatcgaagctttattttcttacatagtttgttcttataaa
aaaacgtgtaggggTCTAAAATAGGAAATATAGTGGTagaaataagattt
ttcaattttccctacgattttagaaatttcaaacttaattTTGGAAATAT
ACTTTTTCTCTCTCCCCCAATAGGTAAAAACACGatagttttcaaaatat
ccACTGAATTTTGGAGTGGACAAGAGATTTTGGAATATACCCATCAATTA
GAAATAGACTTCACTCTTCAATCTTCACTTTAATACatccccttttcaca
gacccactgggaacccttcccactggaaaattgaccaaaatatcgtcccc
agtggaaaattatactcttatttttgtccccgctgaaaataatcagataa
gcaaatcctcattTCAAAATGTTGTGCTATTCGTTTCGTCCCCACTGAAT
CTTTCTGGTTTGAAAACAATTGAGCAGTAgtat
Run BLAST on NCBI

protein sequence of TCONS_00058249-protein

>TCONS_00058249-protein ID=TCONS_00058249-protein|Name=TCONS_00058249-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
IFNSLRTLDLILNESFYLPSIALLMIVQSFRMEFLIYLIGIFSIAVFSTN
ASSCPTRSNVITFDDIKHSARASREVYKDDKAVIGATIRKTPYKIVRVFE
EELFEKGEGIRVAIADHGNTRMIIFRGTDGLTQLLREGASVLKGQHEINY
GQNRVQVLKFFWSAFELVYRYTLPYIQDPKRKYIITGHSLGGALASMMAI
KGAVYHKSLLANPQSSLITFGQPRVGDAAYAKLHDQMVPTYRKIRVVFMS
DPVTKLPPYVAGYRHHSRAVYLGRGLFSFWGKKRSLVEQEIQDEIADPDF
EDNVDSADNDYIEPRSKRFFFPKSYYMQVCGKGEAKSCVVHLNSIAPNLL
HHAMLFYSNALESSSLKFWTIKSERKSSWEDAFIASCHGE
Run BLAST on NCBI

transcript from alignment at scaffold_309:544518..554571+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058249 ID=TCONS_00058249|Name=TCONS_00058249|organism=Clytia hemisphaerica|type=transcript|length=10054bp|location=Sequence derived from alignment at scaffold_309:544518..554571+ (Clytia hemisphaerica)
GATTTTCAACTCTCTAAGAACCTTGGATTTAATTTTAAACGAATCATTCT ATCTGCCTTCGATAGCACTCTTGATGATAGTACAATCTTTTAGAATGGAG TTTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACGAA TGCTTCATCTTGCCCGTAAGTATATAAAgtcaatgttttattttttgtct cagacattttttaaagaagaattcgctgaaaaattgttggaaaatatatt tattttagcCATAACTCCCCCCCCCTTCGTACAGACCCCGTGAGATTTAA TttgccagtgggggtaaaaataccGAACCAAAACTCAacggggattgata tttccattttgctcatgactggggatttgaatCTCATATTGTTTTTGAgc aagaaaattcagtgggatggaaaaaatagcacaataatttgcagtgagga ttggcttatctgattatttccagtggggacaaaaattggaggacaATTTT CCACCAggaacgatattttggtcaattttttccaatggaAAGGCTTCCCT TTAGGGCTGTGAAAAGGGAGCTATAATTTGAAATGATGAAAACCAGAAgc ttatcatgtttttatttaaaaattggaTATTCGAACTTCATAAAAAAGGT TACTCGGCAGACTGTAAAAATCTATCAACAAGATAAgatcttaaaaaaat tatatctagTTAATAAAATTAGAAAGTTAACTATATAGAGAGCGAGTTGA TTGGATTGGTTTGTATAGGGCCCGGGAGGGGGTACTAAGGCAAAATGGGT TAAGGGGATGCGCCGCTGgacagggtaccttttttaacctccacgagtcc caggtagggttgcaaaaacaccaatatagaaaaatcagtccctcgcaggg tgcctatttttggaaaatttgcgggaaaagtagaaaaatttagaaaattt tggaatttcagtcccattcagggtcacttttttcgcaaatttccgCAAAC AAACCAGTTTAATATTTCCGTATGGCTGCTATAGATGAAGAAAACTCGTA CCTAGAGCGACTTGCACcccttttttgttattttgttactGAGAACAAAC AAAATTCTATCAAAGTTGGTATCGAAGGTACAGGGttcatttttcaacca tttCTCAACCGTTACAATCAATCCCagaaatgggctattccagaaaaaat ttgcacccaactttcgaccctcggagaaaacaaagaaatattttgtgaat tttacgacccttaccgggataaatttgaccaattttgaccaaatttcgat ctttctgggcgtaaaaagttgaaattttcctatttctcctacccttagtg ggactgaaattagattttctaatttttcagactTTGGAAATcctaaaaag gtacccttaagggcaacacataccgtaccctccatttagCTAAcaccacc cccccccccgggatttgcacccctatgttgaggaggtacTATTTGGAAAG GTGTCCTcctgaattttttaaaaaaatttcaggaccAGCATGGACTttca acctcattttactgaaGGATTTTTACACTCGGCAAGGAGACACCCtgagt tttttattttccaaagcaccatagacctcctcaacatagggggtacagac tatttctggaatagcccaatctgttatattcatttttcaaagcCTGTAAT ATTCATATTGAATTGGATCATAAATCTTATTAAGGATATCTTCTTAGTCG ATTCTCTAGATATTTATGAACTCTGCTCTAGGAACATACcagttaaaaat tttcaatgaaatttgatgTCCTAAATTTTTTAACGTTTTAGCCTAAAAGT GTTCCTAAACATTCTAAAatcactattttgtgagtattttgatgtgattt ttgttttagagttcgTAAAGcttctcaaaatgttcttaattttttcttaa tatCGTGGCCATCAAACCCTTTTGTTCCTATAAAGTATGTTCTTAGTATA AAGCAAGATTTGATAGGATAATGGTAATTTTATCACTGTCCCTTCAAACA AGCATCATAATCCTGCCCCATGATGAGCATCAGTTTAATGAAAGTTTTTG TCTGGTATGTCAATCTGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggaccct ttgagagactttttcctaaattttggtccactttttccaaattttggttt gattttcaccaaattttggtcaaaatttttggaaatcgtgatcctttgag agagaaatttttgattttcgtgattttgggaccctttcagagactaactt ttgaatttatacccctttgagagacttttgaggaatgagaaaNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCAATCTGGGTA TGCGTCcctcttttttataaattattgAGAGTCGTCTAAACCACATTGAG GTTTGCTGGATTCACGGTGTCCCCACTGCACACACAAATGACCTCAAATC ATGAAGAACAGTGAAGAAGATAGTGCTCAATAACAAGTAGAGCTAAATCA TTTCATGTATTTCTcttcaaatattaaaaacaaacattacACTGTGTTTC ACGCACAAGGCGATCATCAGATGtggataaaaatttttctaCGAACAAAT TCTACTTGTAGAAATCGAAATACCTAGTCCCAAAGGGAATATCTAAATAA AGCGttaaaatataaaacataatAGGATAGTGATTACATAATGTACAtga ttaaaaagttgaaaaggtgCATATAAAACTATCAACTATCAACGACCCGG GCAAATTTTACATTGGTCTCACTGGCAACACGTTCAAGGATCGTTGGAAC ACACACAAATACACACTGAGACACGAAGATNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCAGGCGTCACTGACCCAATTCTCTCCTG GGAAATTATTGATCAAGCTGCATCATACAAAAATGGAACAAAAACGTGCA ACCTTTGTTTGGCAGAAAAATTTCACATTGGCTgtgtttagaccagcctg gcgtTTGTAAtagcttgcagtattcttttgaattctattgttccgcgcaa ttgttcggtttgtcaaatgcctaatgatgccagcgtgttggcattacgtt ggcatttgaaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa cgttggcatttgaaatgccattttgagcaaaggaatccccttttctggca tttcaaatcaaacaaaggaaccaaaacaaagagaaaaaatgacatttttg aatttttatttgcacgttttttattcagttctttctatagattgtaaaat ttgcaaaatttgccatagcctagccctacggcaaaaagtttcagtcttaa tgaNCAAACTAGTGaacaaaaaaactgaattaGTCTCTAAATGCAGGCAT ACAAACAGATTCATTCTAAAGAACTATAAATCAGTCCCTCCGGACAAATA GCTTTTATATGcaccttttcaactttttaatcaTGTACAATATGTAATCA CTATCCTattatgttttatattttaaCGCTTTATTTGGATATTCCCTTTG GGACTAGGTATTTCGATTTCTACAAGTAGAATTTGTTCGtagaaaaattt ttatccaCATCTGATGATCGCCTTGTGCGTGAAACACAAATGACCTctat ttttacacttttttctattgtttataggtgcgaaaaaaagactgagatag ttttagggtggtaaaacagaCGAAAAAATTACCACgcagcaattggcggc tacggttgaaaaggtgtagtGCATTCCATGGCACGTTGTACCTTTCTTAA AAACACCCGCATTTTTTCTCTTCGAGAAAATTTCTAATTAATCTCACTTT ATGATCTTTAGAACTCGTTCCAATGTTATCACATTCGATGACATCAAACA CTCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTTATTG GCGCTACAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGAAGAA GAATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATCATGG AAACACAAGAATGATCATTTTCAGAGGAACCGACGGGTAACATACTGATT TTTTCATGTTCTTAATGggttattccagaaaaaatttgtaccccctatgt tgaagagatctttttttaagaagataaccccctggatttttttccaattt ttcaggacccccttggatttttttctcccatttttttggaccaccctgga ttttcgacctcgttatacttaccaccctggattttcaaccccgggggggg ggtactagggttggcgaatgaggggtatgtgcggacgggacctccgaaaa ccgacccttagagagattgatttttgctgaaaaggtgacccttagagaga ctttgaaagatgaaaaaaccgACACATAGctatcatccatttttgcctaa gtacccctcccccgGGTTTTCAACCCAATTTTACTGACCACTCTGGATTT TATCATCCACCTTGgagtttttattttccaaaccaCCCTGGAAGTCACAt ttcctcaacatagggggtacagactatttctggaataaccTGCAGCCATA GTTCGGAGGCACACAACGGCTTCTCCCTGAATTCCTCAAGTTACCCTTGA TCATTGAGCATCAAGAGGCATCAACCTTACTGGAGATTGAACCTAAGCCT TGCACTCCTTTAGCACCACAGAGCGCTGTTCTTGATAAGTTTAGAAATTA AATTACAAAtataatcataaaatatgaAGGACGGGTGCAATTGAatttgt tttagtttttaaaCACATCGGGTGCTACCAAATggttgcaaaaaaaacaa agaaactgaACTACCAATCTTGAACTtgcttctttctttttcaagccAGC CTCATTCAGCTTCTACGCGAGGGAGCAAGATGCAAGAGTCCAAAAACATA GGCTAATAGAAACCAAAGTACTAAAAGGTTTATCGGTATAGttatggaca aaatatttgggaCAAAGGGGATCTccctgcaaaatttcaaacaccacaaa tgatttttaagtgcgTTAAACTACatttggaaagtagagttttaacatga gacttgagacttaggaccttaggatctcaagatttaaaagttcaaatttt tttttcaaaagaagccaccgaaccccttcaaaatcgaaatattcaatgaa agaaagtggaagtgctaaaataacAATCCTGGtccaaactttaaattctg aaaaacgctagaatacactaaaatgtcaatatatttcgaccatgattgta cttaAATGAACATTACCTCTTTCCTTTTTCCAATCCTCTAGGCTCACCCA NaaccatgattgtagttaaatttttcctttttccaaTCTAGACTCACCCA ACTTCTACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAATCAATT ATGGACAAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTTTTGAG TTGGTTTACCGGTACACATTACCGTATATTCAAGATCCGAAACGGAAATA CATTATCACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGATGGCAA TAAAGGGAGCTGTTTATCATGTAAGCTGTGTCCAATGTCGTTATGCGTAA TTTCCTTTTCTGTTTGTCTTTGCgtgattttagttttttattcGTCAGAG GATAAACTATGGGCGTGATAAGGggtcattgatttcaaagcccctTTGGG CCTAGGTTTTTTAATAAAAGGAGCATGTTTATCATGTGAGTTGTTTCCAA TACCTCTGGACATTACTAACCAAATCTTTTAAGAGCCCTACCCCAGCGAA TTACATGATTGGGACCTATTTACATTCTATCATGTAATCAAGATTTTAGC GTGATGCATGATAGGACAAAACATTCGAGGGTTGATATTTGATTTGGGCT TTTGTTCCCCTTAATGATGAACAATTTTAGTGATTGTTTTTTCGTGAAGA AGAAAACACGGGGATGATGGGGCGATGAAGAGTGtccgtggggggggggg gggggggggggggggggggcttttttaaAACCCTTTATATGACTCTGTAG ATCTTTcctaaaagttatgtttttgatgtttttgagctATTCTAAATTAC TTTGGCCTAGTTCATTGCTCCCTGGAGCAATTTCAAagcctcaaaaaatt ttttaaccctTAGCACACATATTCTTtgacaaaatttcttttcatataTT TCTAGTAATTTCCAATGgctaaatttagaaatttcaaagcTCTTTTGAAA GTCTGAAAATAGGTTTCTAACTTTTTCCCTTTGCATATGACTTCATTGTA TTTATGAAAGCTTTTTACTCCAGATTTCTAACAAAGATACCTGTTTTGCC TAAAAGCGGCATTCCAAGGTGATAAAGAAGAGAAGTGAAGATTTCACATT TCCTaatgcattgctctgattactcCAATGACAGACCTGTAATGTTTGAC CTAAACTTACTTCCAATAAACCATAAAATTTTGTGGAGAATACTTCTCTA TGGGGAAGCAAATTTCAGTTTTACTTCAAATTATGCCATATCAAGCATAA CAATAAAATTCATTCGTGACACCGaccgttttgggggaccgttgTTTTAG TTTGCTTGCTATACGCCTATCCTAAGGTTATAAGGGCTGATAAAATGGCT TTTTGTAGCGTAAAATTAACTTAGATTGGTAACTAGGCTAAATTAGATTT TTCACTTAGTTACctcaatatttgaaaataaatattagACTTTTGGATAA AAACTTTGGTCGAAACAGTTTTGAGAAAGAACATTGAGAAATAGAAAACG TCGAGTAACCATACATGATATGGCTAAActaatttgattagttgtttcac gagcccgaccgaccctgaaatcccaaaaatcgaaataagaattaaattaa atttgcagtagaacatttttatttcattgctTTCATTGCTTTAAAGACTG TCAagttggtagtttttccaatgttttgagaattttatgttcgattttat caaagaatttgatctttttgtgtctttttatttaatatttcgcacttttg tcaagatgtagttgtttttgctgcctttttaggagattttaaaggtgaaa ttctacttttattttaattttttcgccGACCAACCGActctcttttttgg gtagcttggcccgtaaaacaacaaattagatTGGCCTCGCATTAGAAATT GATAATCAATATCAAAATAAGTactctaaaaataaaatcatcctAATTCG AACTCGCTTAAATGTTAACAAAATCTCTGACACCATGACACCATTTGGTA AATCTCTCTCTCTTTATACAGTGTAGTCTTCTTAACTCAAAcatctataa ctcgaatgtcttcttaactcgaacacgtTTCATGGTCTTTTTTGAAGATT GCACCAACACGAAGCACCGTGTAACAATtgttagacgatcctatcgtcta cacaagatcacttaAAATCGCCCACTTGgggcggagtaagcagtggtGGA GGTGTTTACGTTTGTTCCAAGCTCTACCGTCACTATATTTTCCATTAACC GTCCTAACACCCTGACTATTCTGCACATATATTATCCCTCGTTTACTATC GCTCTAAcagacgatagcatcgtctaaacGATTGTAAGTTACACAATTGT AAGTGATCAGTTCTTAATTTCAGGAAGATTACGCTCGATTTTTGTGAGTT TTCttagaattctttttgattCTATCTATTTCACTCATTCATTTTGTATA GAAATCTTTATTGGCAAACCCTCAATCGAGTTTGATAACATTTGGTCAAC CACGAGTTGGTGATGCAGCATATGCTAAACTCCATGATCAAATGGTGCCG ACATACCGAAAAATCAGAGTAGTTTTCATGTCTGATCCTGTCACTAAACT CCCTCCTTATGTGGCTGGATACAGACATCATTCTAGGTATGTTCCTAGTC ATGGTACgcatcactgcaatgtcttcgacATCACCCCATAGAatcaacag ctgattggttgtaagtgacataagatcagtcaatacgtcacttgcaacca atcagatGTCGAGTCCCTGTAATGTTAGGAGACAATGGtggcaatggtgc atatcatgaatttcttTAGTGAGATAAATTCTCACGAGTTCTATTTTTAC GTTCCCGCAaatattgatgtttttttatgttttcagaGCCATTTTTGACT GCATTTTTTaactgattaaaaaaaaatagatcttTTTAGTTCGCGAAATA TCGTTATTATTTTTCCGGTGAACTGTTGTTATGGTGGACTGTCGTGCATC CGAGCATCTAGCATTTGAATCTGTCGGTTATGTAAAGTAATTCTCAGTTC CCTTCTCTTCCATATTTCATTATAGAGCTGTATATTTGGGTCGTGGACTA TTCAGTTTTTGGGGTAAGAAGCGAAGCCTGGTAGAACAAGAAATCCAAGA CGAAATTGCAGACCCTGACTTTGAAGACAACGTCGATTCCGCTGATAATG ATTACATAGAACCAAGAAGTAAACGGTTTTTCTTCCCAAAGAGTTATTAT ATGCAAGTCTGTGGAAAAGGAGAGGCTAAATCATGTGTCGTCCATCTCAA TTCCATTGCTCCAAACCTTCTTCATCACGCCATGTTGTTTTATAGTAACG CTTTGGAAAGTTCAAGTCTCAAATTTTGGACTATCAAAAGTGAACGAAAA TCAAGTTGGGAAGATGCTTTTATTGCAAGCTGTCATGGAGAATAACTTTC ACTGGATCCCTTGGATGGGGCTGaaatcatacacgtttttttataagaac atccaaaatttttgaagccttcggatatcCTTAACTTTTTAGGTTAtaag tcaaaaaattttcgtaaaatgttcttattttctcccttttgtgaccattt tgacACATTTTCCTAAAGAATCGGGTTttttcgagtccgcaaagcctata aatgttcttatcttgttcttagcattttggccatcgaagctttattttct tacatagtttgttcttataaaaaaacgtgtaggggTCTAAAATAGGAAAT ATAGTGGTagaaataagatttttcaattttccctacgattttagaaattt caaacttaattTTGGAAATATACTTTTTCTCTCTCCCCCAATAGGTAAAA ACACGatagttttcaaaatatccACTGAATTTTGGAGTGGACAAGAGATT TTGGAATATACCCATCAATTAGAAATAGACTTCACTCTTCAATCTTCACT TTAATACatccccttttcacagacccactgggaacccttcccactggaaa attgaccaaaatatcgtccccagtggaaaattatactcttatttttgtcc ccgctgaaaataatcagataagcaaatcctcattTCAAAATGTTGTGCTA TTCGTTTCGTCCCCACTGAATCTTTCTGGTTTGAAAACAATTGAGCAGTA gtat

Coding sequence (CDS) from alignment at scaffold_309:544518..554571+

>TCONS_00058249 ID=TCONS_00058249|Name=TCONS_00058249|organism=Clytia hemisphaerica|type=CDS|length=5865bp|location=Sequence derived from alignment at scaffold_309:544518..554571+ (Clytia hemisphaerica)
ATTTTCAACTCTCTAAGAACCTTGGATTTAATTTTAAACGAATCATTCTA
TCTGCCTTCGATAGCACTCTTGATGATAGTACAATCTTTTAGAATGGAGT
TTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACGAAT
GCTTCATCTTGCCCAACTCGTTCCAATGTTATCACATTCGATGACATCAA
ACACTCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTTA
TTGGCGCTACAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGAA
GAAGAATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATCA
TGGAAACACAAGAATGATCATTTTCAGAGGAACCGACGGACTCACCCAAC
TTCTACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAATCAATTAT
GGACAAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTTTTGAGTT
GGTTTACCGGTACACATTACCGTATATTCAAGATCCGAAACGGAAATACA
TTATCACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGATGGCAATA
AAGGGAGCTGTTTATCATAAATCTTTATTGGCAAACCCTCAATCGAGTTT
GATAACATTTGGTCAACCACGAGTTGGTGATGCAGCATATGCTAAACTCC
ATGATCAAATGGTGCCGACATACCGAAAAATCAGAGTAGTTTTCATGTCT
GATCCTGTCACTAAACTCCCTCCTTATGTGGCTGGATACAGACATCATTC
TAGAGCTGTATATTTGGGTCGTGGACTATTCAGTTTTTGGGGTAAGAAGC
GAAGCCTGGTAGAACAAGAAATCCAAGACGAAATTGCAGACCCTGACTTT
GAAGACAACGTCGATTCCGCTGATAATGATTACATAGAACCAAGAAGTAA
ACGGTTTTTCTTCCCAAAGAGTTATTATATGCAAGTCTGTGGAAAAGGAG
AGGCTAAATCATGTGTCGTCCATCTCAATTCCATTGCTCCAAACCTTCTT
CATCACGCCATGTTGTTTTATAGTAACGCTTTGGAAAGTTCAAGTCTCAA
ATTTTGGACTATCAAAAGTGAACGAAAATCAAGTTGGGAAGATGCTTTTA
TTGCAAGCTGTCATGGAGAATAAATTTTCAACTCTCTAAGAACCTTGGAT
TTAATTTTAAACGAATCATTCTATCTGCCTTCGATAGCACTCTTGATGAT
AGTACAATCTTTTAGAATGGAGTTTTTAATCTATTTGATTGGGATATTTT
CAATTGCAGTTTTTTCGACGAATGCTTCATCTTGCCCAACTCGTTCCAAT
GTTATCACATTCGATGACATCAAACACTCAGCGCGAGCGTCAAGAGAAGT
CTACAAAGATGATAAAGCAGTTATTGGCGCTACAATCCGCAAAACACCAT
ACAAGATTGTAAGAGTTTTTGAAGAAGAATTATTTGAGAAAGGAGAAGGA
ATTCGTGTGGCGATTGCAGATCATGGAAACACAAGAATGATCATTTTCAG
AGGAACCGACGGACTCACCCAACTTCTACGCGAGGGAGCAAGTGTCTTGA
AAGGTCAGCATGAAATCAATTATGGACAAAACAGAGTTCAAGTTCTCAAA
TTTTTCTGGTCAGCTTTTGAGTTGGTTTACCGGTACACATTACCGTATAT
TCAAGATCCGAAACGGAAATACATTATCACTGGTCATTCCCTTGGAGGTG
CATTGGCCTCAATGATGGCAATAAAGGGAGCTGTTTATCATAAATCTTTA
TTGGCAAACCCTCAATCGAGTTTGATAACATTTGGTCAACCACGAGTTGG
TGATGCAGCATATGCTAAACTCCATGATCAAATGGTGCCGACATACCGAA
AAATCAGAGTAGTTTTCATGTCTGATCCTGTCACTAAACTCCCTCCTTAT
GTGGCTGGATACAGACATCATTCTAGAGCTGTATATTTGGGTCGTGGACT
ATTCAGTTTTTGGGGTAAGAAGCGAAGCCTGGTAGAACAAGAAATCCAAG
ACGAAATTGCAGACCCTGACTTTGAAGACAACGTCGATTCCGCTGATAAT
GATTACATAGAACCAAGAAGTAAACGGTTTTTCTTCCCAAAGAGTTATTA
TATGCAAGTCTGTGGAAAAGGAGAGGCTAAATCATGTGTCGTCCATCTCA
ATTCCATTGCTCCAAACCTTCTTCATCACGCCATGTTGTTTTATAGTAAC
GCTTTGGAAAGTTCAAGTCTCAAATTTTGGACTATCAAAAGTGAACGAAA
ATCAAGTTGGGAAGATGCTTTTATTGCAAGCTGTCATGGAGAATAAATTT
TCAACTCTCTAAGAACCTTGGATTTAATTTTAAACGAATCATTCTATCTG
CCTTCGATAGCACTCTTGATGATAGTACAATCTTTTAGAATGGAGTTTTT
AATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACGAATGCTT
CATCTTGCCCAACTCGTTCCAATGTTATCACATTCGATGACATCAAACAC
TCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTTATTGG
CGCTACAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGAAGAAG
AATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATCATGGA
AACACAAGAATGATCATTTTCAGAGGAACCGACGGACTCACCCAACTTCT
ACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAATCAATTATGGAC
AAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTTTTGAGTTGGTT
TACCGGTACACATTACCGTATATTCAAGATCCGAAACGGAAATACATTAT
CACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGATGGCAATAAAGG
GAGCTGTTTATCATAAATCTTTATTGGCAAACCCTCAATCGAGTTTGATA
ACATTTGGTCAACCACGAGTTGGTGATGCAGCATATGCTAAACTCCATGA
TCAAATGGTGCCGACATACCGAAAAATCAGAGTAGTTTTCATGTCTGATC
CTGTCACTAAACTCCCTCCTTATGTGGCTGGATACAGACATCATTCTAGA
GCTGTATATTTGGGTCGTGGACTATTCAGTTTTTGGGGTAAGAAGCGAAG
CCTGGTAGAACAAGAAATCCAAGACGAAATTGCAGACCCTGACTTTGAAG
ACAACGTCGATTCCGCTGATAATGATTACATAGAACCAAGAAGTAAACGG
TTTTTCTTCCCAAAGAGTTATTATATGCAAGTCTGTGGAAAAGGAGAGGC
TAAATCATGTGTCGTCCATCTCAATTCCATTGCTCCAAACCTTCTTCATC
ACGCCATGTTGTTTTATAGTAACGCTTTGGAAAGTTCAAGTCTCAAATTT
TGGACTATCAAAAGTGAACGAAAATCAAGTTGGGAAGATGCTTTTATTGC
AAGCTGTCATGGAGAATAAATTTTCAACTCTCTAAGAACCTTGGATTTAA
TTTTAAACGAATCATTCTATCTGCCTTCGATAGCACTCTTGATGATAGTA
CAATCTTTTAGAATGGAGTTTTTAATCTATTTGATTGGGATATTTTCAAT
TGCAGTTTTTTCGACGAATGCTTCATCTTGCCCAACTCGTTCCAATGTTA
TCACATTCGATGACATCAAACACTCAGCGCGAGCGTCAAGAGAAGTCTAC
AAAGATGATAAAGCAGTTATTGGCGCTACAATCCGCAAAACACCATACAA
GATTGTAAGAGTTTTTGAAGAAGAATTATTTGAGAAAGGAGAAGGAATTC
GTGTGGCGATTGCAGATCATGGAAACACAAGAATGATCATTTTCAGAGGA
ACCGACGGACTCACCCAACTTCTACGCGAGGGAGCAAGTGTCTTGAAAGG
TCAGCATGAAATCAATTATGGACAAAACAGAGTTCAAGTTCTCAAATTTT
TCTGGTCAGCTTTTGAGTTGGTTTACCGGTACACATTACCGTATATTCAA
GATCCGAAACGGAAATACATTATCACTGGTCATTCCCTTGGAGGTGCATT
GGCCTCAATGATGGCAATAAAGGGAGCTGTTTATCATAAATCTTTATTGG
CAAACCCTCAATCGAGTTTGATAACATTTGGTCAACCACGAGTTGGTGAT
GCAGCATATGCTAAACTCCATGATCAAATGGTGCCGACATACCGAAAAAT
CAGAGTAGTTTTCATGTCTGATCCTGTCACTAAACTCCCTCCTTATGTGG
CTGGATACAGACATCATTCTAGAGCTGTATATTTGGGTCGTGGACTATTC
AGTTTTTGGGGTAAGAAGCGAAGCCTGGTAGAACAAGAAATCCAAGACGA
AATTGCAGACCCTGACTTTGAAGACAACGTCGATTCCGCTGATAATGATT
ACATAGAACCAAGAAGTAAACGGTTTTTCTTCCCAAAGAGTTATTATATG
CAAGTCTGTGGAAAAGGAGAGGCTAAATCATGTGTCGTCCATCTCAATTC
CATTGCTCCAAACCTTCTTCATCACGCCATGTTGTTTTATAGTAACGCTT
TGGAAAGTTCAAGTCTCAAATTTTGGACTATCAAAAGTGAACGAAAATCA
AGTTGGGAAGATGCTTTTATTGCAAGCTGTCATGGAGAATAAATTTTCAA
CTCTCTAAGAACCTTGGATTTAATTTTAAACGAATCATTCTATCTGCCTT
CGATAGCACTCTTGATGATAGTACAATCTTTTAGAATGGAGTTTTTAATC
TATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACGAATGCTTCATC
TTGCCCAACTCGTTCCAATGTTATCACATTCGATGACATCAAACACTCAG
CGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTTATTGGCGCT
ACAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGAAGAAGAATT
ATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATCATGGAAACA
CAAGAATGATCATTTTCAGAGGAACCGACGGACTCACCCAACTTCTACGC
GAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAATCAATTATGGACAAAA
CAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTTTTGAGTTGGTTTACC
GGTACACATTACCGTATATTCAAGATCCGAAACGGAAATACATTATCACT
GGTCATTCCCTTGGAGGTGCATTGGCCTCAATGATGGCAATAAAGGGAGC
TGTTTATCATAAATCTTTATTGGCAAACCCTCAATCGAGTTTGATAACAT
TTGGTCAACCACGAGTTGGTGATGCAGCATATGCTAAACTCCATGATCAA
ATGGTGCCGACATACCGAAAAATCAGAGTAGTTTTCATGTCTGATCCTGT
CACTAAACTCCCTCCTTATGTGGCTGGATACAGACATCATTCTAGAGCTG
TATATTTGGGTCGTGGACTATTCAGTTTTTGGGGTAAGAAGCGAAGCCTG
GTAGAACAAGAAATCCAAGACGAAATTGCAGACCCTGACTTTGAAGACAA
CGTCGATTCCGCTGATAATGATTACATAGAACCAAGAAGTAAACGGTTTT
TCTTCCCAAAGAGTTATTATATGCAAGTCTGTGGAAAAGGAGAGGCTAAA
TCATGTGTCGTCCATCTCAATTCCATTGCTCCAAACCTTCTTCATCACGC
CATGTTGTTTTATAGTAACGCTTTGGAAAGTTCAAGTCTCAAATTTTGGA
CTATCAAAAGTGAACGAAAATCAAGTTGGGAAGATGCTTTTATTGCAAGC
TGTCATGGAGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036697XLOC_036697Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058249-exon-scaffold_309-1491911889:544518..544682TCONS_00058249-exon-scaffold_309-1491911889:544518..544682Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1510915933:544518..544682TCONS_00058249-exon-scaffold_309-1510915933:544518..544682Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1575043694:544518..544682TCONS_00058249-exon-scaffold_309-1575043694:544518..544682Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1491911889:548929..549153TCONS_00058249-exon-scaffold_309-1491911889:548929..549153Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1510915933:548929..549153TCONS_00058249-exon-scaffold_309-1510915933:548929..549153Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1575043694:548929..549153TCONS_00058249-exon-scaffold_309-1575043694:548929..549153Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1491911889:550459..550687TCONS_00058249-exon-scaffold_309-1491911889:550459..550687Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1510915933:550459..550687TCONS_00058249-exon-scaffold_309-1510915933:550459..550687Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1575043694:550459..550687TCONS_00058249-exon-scaffold_309-1575043694:550459..550687Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1491911889:552869..553053TCONS_00058249-exon-scaffold_309-1491911889:552869..553053Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1510915933:552869..553053TCONS_00058249-exon-scaffold_309-1510915933:552869..553053Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1575043694:552869..553053TCONS_00058249-exon-scaffold_309-1575043694:552869..553053Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1491911889:553493..554571TCONS_00058249-exon-scaffold_309-1491911889:553493..554571Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1510915933:553493..554571TCONS_00058249-exon-scaffold_309-1510915933:553493..554571Clytia hemisphaericaexon
TCONS_00058249-exon-scaffold_309-1575043694:553493..554571TCONS_00058249-exon-scaffold_309-1575043694:553493..554571Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058249-proteinTCONS_00058249-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:544518..554571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (18.8133 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.124123 0.120532 0.24328 0.957646 0.500235 1.05513 0.906607 6.96498 3.0603 8.77547 18.8133 2.79388 4.88467 1.76472 1.13456 0.127014 0.601409 1.28049 1.5363 0.314647 0.241077 0.166314 0.221502 0.286019 0.529164 0.495326 0.0626324 0.481524 0.239334
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR002921Fungal_lipase-like
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058249 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
20040060080010001200140016001800Sequence
Match NameE-valueIdentityDescription
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