TCONS_00058258 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058258
Unique NameTCONS_00058258
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1566

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058258 ID=TCONS_00058258|Name=TCONS_00058258|organism=Clytia hemisphaerica|type=transcript|length=1566bp
TTAAAATTCAAAGTAATTTTTCGACTTTGTGTCTATAAGCAGCACTCTCT
CTACTGTGCGCTGTTTTTGTTGTAGCAGAATGCTGTATAGATAGGAACGC
AGAATTCAATTAAAAGAGAAATCATTTGGAATTTAACAGTGTGTGTGTGC
ATCGTTCCTTTTTTATCAGTTTATGTGCTGTTGTACTGAGCTACAGAAAA
TTATGTTTAATATCAAGTTGTTTGTCAGGGGTTTTTGAGCTGAGAGGAAG
ActtaaacttgattttcttaaaCATGACTAAAGGCGACGATGACAAACCG
AAGAGACTTAGCCTTCGAGAGAGGATGGCACTCCGTGGAGGGGACGGAGA
GGAGGAGACCACCATTATAACCACTACAACCACTACTGACACCCAACTAA
AGAAATATCGACAATCGAGAGAAGTAAGCGAAGAAGAGGCTATTGAGAAA
AGTACCACGCGTAAAGTCATCCGATTGGATGAGAACGGAAATGAAGAAGT
GACCGTTAGAGAAAGACACCTCATCAATACTGATGAGGAACAAGTGAAAC
GGGAGGTCTCACGAAAATCCAAAAATTATGAGTCTTTGCCAGAAGAAGAT
GAAACACCCTCCAAcgataaaaacaacaacaaacgaAACGCTGAAATCAC
CATCGAGCCTCAAGAAAAAACCATTGAACAACGCCGACAAGAACGTGCCG
AACGTCGTGCCAGTAGACGGAAAGAATCTGACACACCGCCGTCAAGCGTT
GAAAAGACGGTGACAGTTCAAACGTCCATTTCTACCACGGATAATGGAGT
CGAAAATGTCAAGACCACGCGCACAAGCCGTTTCTCGAGAGGCTCAACGA
AGGAGAGTGAAAAAGTTGAACAGAAAACGGTGGAAGTCAAAATGGAAGCT
AAACCTGTGAAGATGGAAGCTAAAGAAATCAAAGTGGAAACAAAAGTTGA
AGCAAAAcctgaagaattgaaaaaagagGAACCTAAAAAAGTTATTGAGG
AAAAAATTGAAGTCAAGGAGGAAAAAACTGTTGAAAGTGCGAAAGTTGAG
GAACCAGCGAAAGTTGAGGAAACGAGGAGAAGTTCGAAAGTGGAAGAAGC
TCCTAAAAATGAAGTTAAAGATAAATTATcatctttaaagaaaaatcaat
ttgaaagtaACAAAGGTAATTCAAGGAACAGGCCAGGCTCCATGGTAgac
ttcaaatcaaaatttgaaaacaaatccaATACGAACGCAGTCAACAAAAG
ACCCGTCTCTATGAACATTAAATCGAAATTCGAACAAGACACAAAACCTG
CTAATAAATTCGAACTTCGTAAAACCACATCCGTTCCTTTGAAACCATCA
GCGTTGAAAACCTCTACCAATAAAGTTGAATCCGATAAGAATGGAGTACA
CACAGAGAAAACCGTCACCAAGACAGATGCAACTATCGGAGAAGGAGCCT
CCAAGAAAGAAGTCAAAGAGATCAAGTCAGTGGAAACCAAAGACACGGCT
ACAACCCATGCTGAAAAAACCACCACCATCACAGAAACCAAAACTAAAGG
AGGAAGCACTACTGNN
Run BLAST on NCBI

transcript from alignment at scaffold_309:602810..616504+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058258 ID=TCONS_00058258|Name=TCONS_00058258|organism=Clytia hemisphaerica|type=transcript|length=13695bp|location=Sequence derived from alignment at scaffold_309:602810..616504+ (Clytia hemisphaerica)
TTAAAATTCAAAGTAATTTTTCGACTTTGTGTCTATAAGCAGCACTCTCT
CTACTGTGCGCTGTTTTTGTTGTAGCAGAATGCTGTATAGATAGGAACGC
AGAATTCAATTAAAAGAGAAATCATTTGGAATTTAACAGTGTGTGTGTGC
ATCGTTCCTTTTTTATCAGTTTATGTGCTGTTGTACTGAGCTACAGAAAA
TTATGTTTAATATCAAGTTGTTTGTCAGGGGTTTTTGAGCTGAGAGGAAG
ActtaaacttgattttcttaaaCATGACTAAAGGGTAGGTAACACTTCTT
TTCTAGCTGACCGTCctttttataagtttcccatttccgcactgagattt
ttgtcactttttcgaaatctttccgCTATTTNtataagtttcccatttcc
gcactaagatttttgtcactttttcgaaatctttccgCTATTTGTCCCAG
GATAACTGGAAAGCGATTGGAAAGAGTTTTTTCTAAAGGTagggaaaatc
ttgtgtttactaaCGAAACTGCCCAATTTTCCAAAGCTCATTTTTTAACT
ACccgaagtcctggtctttttccgaTAGAAAAGTAccaaaggaatcttag
tgtgGAAATGAGAAACTTATAAAAACGACGCTATTTTTTCTTGGATATGC
CCTTACCGGCGTATAGGGATTGTTTTTAAAAGTACAAACACTGATGTGCC
GTGAGAAACATTACGTCATCGGAGGGAGTAAGGACGAGATTGTCAACAGA
GtcaactacaatcatggttgtaatatttgagaaaaaagattaATTCCCAC
AAAATTTTATAGCCACAAAAGATTTTGGAGTGCTCTAACTTAGGTTAGAA
GGGTAGAGCTTTAACTCTgattttaacgctagacttaaggacaaaagttc
aaaatggtccaataaggctcagaatatagcctgatAAACCCAGAATATAG
TCGATAAACCCCTCTTAAATTAAAATATTCGATTACATTGAACAGATAGC
CCAAAAGTAACTTTCTCAcccgaacttcaaattttggaaaacgACGAAAT
TACCAATTTCTCAACGTATTTCAAAGCATAGATTGTAGATAGAAGCTTGA
TGTAGAACATATAAAGGGAGATTTGGAATTTCATTTCATTCAGAGTCATA
TTGGCAAAGAAGTACCATCATTCATCCCACACAGGGTCTATTTATCAAAC
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATtcgaacct
aagagtaatttgAATTCATCAATAAAACCCAATAATTACCTCTGGGATAA
ATTCTTCAGACTTCAGGTTTCGTACTTGCAATCTTTTAGttagaaacttt
tgaaacaCTAATCAGAAAGACCTCAAAATATATCTATACAAATTTTATCT
TTGAAAGGGTGCTGCAGAATTGAGCATACGTGATTAATTTTATCTTACtt
ctttcaattttcatccTTTCAAGCTTTCAATTAGGAACTTTTGAAATGCT
GATCAGAAAGACCTTAAAATATATCTATACAAATTTTATCTTTGAACAGA
TGCTGCAGAAACGAGCATAGCGTGATTAACTTTATCTTACTTCTATCATC
GACAGTGATCCTTGTCAAACTTTTTGAGATAAAGAATGAAATTAGATTAA
TGCTTTCGACCTTTGATAATCTGACAAAGTagattctttgaagaaaaaga
aggatgGTCCTACATACCACAATAACATAGAATTGTCTGCCAGAGCAACT
CCCTGTCTGTCTACTTCTGTTTTCAAATGTCCCTGTGAAAACATATACtg
tgctatagtctaagacaaatcactatctaagaaataagcctaAAGCCGAG
AaagttttttgccgaaaagagtttacagtcggtagagtttgccacATTTT
TGCGTTTCTTCAAAACTCTCCCgccgtttttttttttccttaaaCCACCA
TACCGCCATAATTTCCCGCCTTTTCTATCACTGTAACAGAAGATGACATC
TTCTCGTGAAAACGATGATTGTGAGATTTTTTTTGCGGGGTGACTGTAAA
GATATAGNCCTTAAACCGCCATACCGCCATAATTTCCCGCCTTTTCTATC
ACTGTAACAGAAGATGACATCGTCTCGTTAAAAACGATGATTGTGAGATT
TTTTTTGCGGGTTGACTGTAAAGATACAGTGATTGAAGTTTAGACGAATA
TTCCATGAGGAGACTAACATGAGGAAAATTATGATCTTTTTTTAGTTAta
cccacagatatcttatataaagcACTAGATAGAGCTTCTCTGTATAGGGA
ATCGGATTATTAATCGGGGTGGAATAGCTTTAtctagttttttatataag
atatctgtggttatACCTCgataaaaatggagaaaaaggTAACATTAGGA
TTCTTCCACTTAACCAGAAAAGTCTtccatttatatttttaaatctCTCG
TTAAGCTAAAGTTACAATCTCTCACAGTGGATCCATGAGCCTATTTATTG
TTCATTTTTTGTCAGCTTAGATTTTGTTAAGCCTTTTTTTGAGTGTTGTa
tttaaaactttgaaatttgtgaaaaatcaaCCAGCTTGCaccttttgttt
tataagaacattaaggcttcgatggccaaaatgttaagaacaagttaagc
tTCCCGGACTATAAAAcactatttcttaggaaaattgacgaaaatactca
aaaaatggcgaaaataaaaacatgttgctaagaacatttttaggcttaaa
acccaaaaagttaagaacatccgaaagcttcaaaaattgtggatgCTCTT
ATAAGAGTAGCATCATACATTCGATTTGTGCTGGTATCGCttcaaattaa
aataattatttggTCCGATAGTTGCTAATTACCAAATAACCTTCATTAAA
TAATATGTTAATATGATAAACTTTTCTTTATATTCCTTCATTCTGCAGCG
ACGATGACAAACCGAAGAGACTTAGCCTTCGAGAGAGGATGGCACTCCGT
GGAGGGGACGGAGAGGAGGAGACCACCATTATAACCACTACAACCACTAC
TGACACCCAACTAAAGAAATATCGACAATCNtcactatctaagaaataag
cctaAAGCCGAGAaagttttttgccgaaaagagtttacagtcggtagagt
ttgccacATTTTTGCGTTTCTTCAAAACTCTCCCGCcgttttttttttcc
ttaaaCCGCCATACCGCCATAATTTCCCGCCTTTTCTATCACTGTAACAG
AAGATGACATCGTCTCGTTAAAAACGATGATTGTGAGATTTTTTTTGCGG
GTTGACTGTAAAGATACAGTGATTGAAGTTTAGACGAATATTCCATGAGG
AGACTAACATGAGGAAAATTATGATCTTTTTTTAGTTAtacccacagata
tcttatataaagcACTAGATAGAGCTTCTCTGTATAGGGAATCGGATTAT
TAATCGGGGTGGAATAGCTTTAtctagttttttatataagatatctgtgg
ttatACCTCgataaaaatggagaaaaaggTAACATTAGGATTCTTCCACT
TAACCAGAAAAGTCTtccatttatatttttaaatctCTCGTTAAGCTAAA
GTTACAATCTCTCACAGTGGATCCATGAGCCTATTTATTGTTCATTTTTT
GTCAGCTTAGATTTTGTTAAGCCTTTTTTTGAGTGTTGTatttaaaactt
tgaaatttgtgaaaaatcaaCCAGCTTGCaccttttgttttataagaaca
ttaaggcttcgatggccaaaatgttaagaacaagttaagctTCCCGGACT
ATAAAAcactatttcttaggaaaattgacgaaaatactcaaaaaatggcg
aaaataaaaacatgttgctaagaacatttttaggcttaaaacccaaaaag
ttaagaacatccgaaagcttcaaaaattgtggatgCTCTTATAAGAGTAG
CATCATACATTCGATTTGTGCTGGTATCGCttcaaattaaaataattatt
tggTCCGATAGTTGCTAATTACCAAATAACCTTCATTAAATAATATGTTA
ATATGATAAACTTTTCTTTATATTCCTTCATTCTGCAGCGACGATGACAA
ACCGAAGAGACTTAGCCTTCGAGAGAGGATGGCACTCCGTGGAGGGGACG
GAGAGGAGGAGACCACCATTATAACCACTACAACCACTACTGACACCCAA
CTAAAGAAATATCGACAATCGAGAGAAGTAAGCGAAGAAGAGGCTATTGA
GAAAAGTACCACGCGTAAAGTCATCCGATTGGATGAGAACGGAAATGAAG
AAGTGACCGTTAGAGAAAGACACCTCATCAATACTGATGAGGAACAAGTG
AAACGGGAGGTCTCACGAAAATCCAAAAATTATGAGGTACTTCCATTTTT
TGTGACCGATCTATGTTTTCCAAGGTAgccagtctgttcctctaaagaat
aCTGCATTgcaacacgcatgcgtaatttgtcgttcttttaaccCTATGTA
GTTTATTTCCGTGATaaacaaaaaagaatgaatTCGTAGGGGTGGACTAA
CTAACCGGCTCGGAGTTGTGGACAGCAAAAATTGTCGTTcattatgaaat
ttgtcgttctttttgtctatttttagtaaatgtaggattctttagataaa
acCCCTCAGCACCCTTTATTCTAAAATGGCTTGCACTTTGCTTGCTTGCT
TGATTTTCTCACTTTGTCTGCATCCTAAGCATTCGCGTTTTGAAACCTTT
CGGTTGCATACTTGTTGCTACACAACTTGTAATGGTTTCGTGGCTACAAA
GCATTTATACACCCATTTTTATATAGAGGATAAAGTATTTGAAAAGGCtt
caaaaagataaataaaataaGAACACGCAAATCAAGGATCAAAATATGGT
AAAAAATACTTTGATaggcataaaattctcaaaagcaATTTGAGGCCCAC
AAAATATGAGCTGAACCTCAAGAAAAATGTACTTGTTCTCATAACAAAGA
GTGTCAGGGTAACCAATGGCAATTCATGAAACATATTGATCAATTGCAAT
ATCTTATTTTCAACTCGTTGATGCTTTTGTATactcctgtgtcacagacc
tgcttgaagcccagccccactggaaagattgacaaaaatttcgtccccgg
tgggaaaataccctggaatttcagccctacTTGGAAATTGgctttcatcc
ccattcgaaattcaatgggTTTAAAAACTGCACTTTCAAAACCAATGCCT
TGgaacaaaggaatttctatccccaccggggctgtgagaaaaacaaaaac
aaaaacaaaatcagagGCGCTACTGAGGGAATTCAGTCAGTGGCTCGTCA
CAGCTGTCATTCTTTTTATAGTGATCATGTGATCAGAATGgagtaatatt
ttttcattatgGTAAATTATACCACAAGATCATCCATCTGTAATCACATT
GCTTATCTTACgaattaactttgtatcatttTCGAAGCCATATTTGGTAT
TCTCCATCATGTTATTACACGCATGCATCAAGTTATCGAAAAATCCGATT
TATTTTTCTCTCTACCTTCTAATGCGATGATTCATTCCAGATTACATATT
TGTCTTTCAAAATCTCCAGAAACTAAAACGTATATCTACTAGCATTCTTT
TTGGTTAGTGTGGAAATTTTCTCTAACGACTTTGCCTTCAAAGGCCTTCA
AATATCGAAATACCTCTTATGATGGCAAGCCTAATAGAGACGAATGAGAA
ATCTAACTGtacgcgtttttttatataagaacaaactatataagaacata
aagcttcaatgacgaaaatgttaagaacaacttaagaacattttaaggct
ttgcagactctaaaatacccaatttcttaggaaaatgaacaaaaatactc
acaaaatggtaaaaataagaacatgttaaggcctaaaactcgaaaagtta
agaacatctaacTAATTAAAGTCTCGATCCAAACAAGTTAATTAAGAATT
taagcaaaacaaaatggccTTCTTCAAAGTCAAGAGGAAAAGGTGAAATC
AATTTGCACCAATTATAAGTTATGATACATCGGTTGGCACTTCAATCAGG
AaggatatataaaaattttatcgCTTTACataaatttgtctttttatGGA
GATCTTCATTTATTTCCATCTTTATAAAGAAATATCCTCGGCATGTTTCT
CATTCTCTTTAATTGTTTCCTTTctcgatacacgtttttttataagagca
aactatataagaacataagtcttcgttggccaaaatactaaaaacaagtt
aacaacattttaaggctttaattaaaccaatttcttaggaaaatgaacaa
aatattcaaaaaatggagaaaatatgAACATgcgaagaacatttttaggc
tttaaaacttaaaaagtttatcccaaggcttcaaaaattttggatgtttt
tatagaggaaagaaaacgtgtatcttGTCATTAGAATTCCTTCGTCTTTA
AATTTTGGCAAGTTAGTTTTGTTGTTGAATTTTTCTGATTCTTCtaacat
cttctttttcaacCTCTAAACTTTACAATTCAATTAATCTGGACATTTGA
CATAATGGGCGTGGCTCTTCCATAAGATGTCCTAGAAATAAAACTTTATG
ACGTCAATTTCTTCGAATTTCTGAAACTCTGTCAACACCGACTCTTTTCT
TTCtgtaaccactgacctttacataccctggaccaagtttctcaaNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNaagaacatttttaggctttaaaacttaaaaagtttatcc
caaggcttcaaaaattttggatgtttttatagaggaaagaaaacgtgtat
cttGTCATTAGAATTCCTTCGTCTTTAAATTTTGGCAAGTTAGTTTTGTT
GTTGAATTTTTCTGATTCTTCtaacatcttctttttcaacCTCTAAACTT
TACAATTCAATTAATCTGGACATTTGACATAATGGGCGTGGCTCTTCCAT
AAGATGTCCTAGAAATAAAACTTTATGACGTCAATTTCTTCGAATTTCTG
AAACTCTGTCAACACCGACTCTTTTCTTACtgtaaccactgacctttata
taccctggaccaagtttctcaaccGATCCCGGTCAAGCAATATCTTtgtt
tggagttttttgaaaagtggtaccctaatggtggcactactcaatagcgg
tgtaaatgcatcgatagcgctagatctactttccctcgaaaacttttgat
gatgtgcgccgttagacgttaataatttttaacactgaaatggcttcttt
acggctATACCAATTCAAAGAAAACtttgatcaaagatggcggatatatc
ttggtccagggatatacaAAGGTCAGTGCTTGTGACTTCTCAACCAAAAT
AGTTCCTCTCACTCAAGTGCGGTCTTAACTATCATGATATAAGAATGCTG
CAATAAATTTTGTATCGAAACGATAATTTGTCTAATGTATAAGCGAATCA
ATTAGCAGAGAGATTAGTCGACCTCTTAAATGCTATTTGATGAGTATAAA
CTAACCGAACGAAACCAAATAATCCCTCCACTCTTGTTCCTCTTACAATC
ACTTAAACATACTTGACGTCTGAAAGATCACCCTTTAAAAGACGACATAA
ATATTTAGTCCGTAATTCGATCGCAGTCCTATCAAAAAATGATAGATCCT
TCTTATGGTTTGATTATAAGAAGGCTTACAAGAGAGAAGGGTTGAGTACA
GACAGACAACATTTTCTAATTACCGCAGTAAACGGAAATATCAACTCTTC
CTTGTTTTCATTTAATTGGTTGAGctgatgatgatgaaagttattGTTTT
CGTTTCTCGTATACATCTACAGtgtgttttgaaagttggtgTATTTTGTT
GACATTTTGTTTGTGTTGTGNCGTATACATCTACAGTGTGTTCTGAAAGT
TGGTGTATTTTGTTGACATTTTGTTTGTGTTGTGTAAAGAACGTTTTGTT
GTTTCATATTTGTCGAATTGACATTTTTCTCTTGTTTGACACTGTTTTAT
TACAAATCATACTTAAAGACGATCGCTCATCTATATTAGAAAGTTCAGTC
ACTTTTTTGAGACAGAATTGGACTTGTTATACAACGTGTTCATTACACTT
GACTTCAGTTatcaaacaatttttatttGGTCATCCATCATCAATTCTAA
AGATTCTTTTGGTGAATACGTTGGCTAtataaagatttgtttttatgGAG
TAAGTGTTTACCGTTCAAACAGACGTTTCATGATTTATATTATTTGATGG
TTTTATACGTATCCAAGTGGAGGATTTGTAATTGACACTCTCGCTCGCTC
TCTTTATCTCTCTTCAATTTGACGTACAAAACTTTCCTTCGCTCACGTAT
TCGTTTCTCACTTATTAGTTTTTGGTGTTTTGACTGGAAATCGTCTGAAT
TCTTCTTGGCGTTATTCCGTAGGATTGAAAAGTGGAAGATTTACTGGAAT
TTTTCGGACTCAGAATTGAATTGACTGTTTGTTCAACACTTGTATACGTT
TTGATGacacttttgaaaaattacatatacaTATAGAAGTAAATCTATCC
TATGTTAACATTGCAATCAAGTGTCGATTGGAAAGCTACCATTTTTATTG
GTCGTTTATTAAGTCAACTTTAGTGGACGGGTTTGTGTGTATGTGACTTT
ATAAAAAGTGTTGTTCGAAAAAAGATAATGTCATTGATCAAGATGAGGTC
CAAAGCATTCGAATCATCTTCTGTTGGCAAGGGGATTGTGggtaataaaa
atgacaaagCATTGCTTATCAATCAACCTATCTCTATGCGAATCAAGTAC
TGGGTAAGGTGATTCTTCTTTGGCTGAtgttttagaccatgttcgcacgt
gacagTTCCATTTCGCTCCAAAACGGAATGAAGCCGTGGTTCTAGTTAGA
AGTGACGGAAGACTTGTATGTAACCAagagaatggcttcatttcgtttcg
gagcgaaacggaaccgtcacgtgcgaatATGGCctcagaccatgttcaga
cgttacggtttcgtatcaCTCCGGCATGGCTTCCGTTACAGATtgagagt
gttcatattggtttcggaacgttttggagcaagaaaacggagcagttccc
ttccgatgaaaaaagtggaacgaaaacgtttcgatctgttttggaTTGTA
ACGCCTACTTTTTtaacgtttcgaattttgacgttcacacttgtttcggg
accgtttcgtttcggaatgatacggaacagtaacgtctgaacatggtttC
AAGCTTGGTTCAATCAAAAACTCAATGTCTTTCTGGGGAGTGCACTGACC
GTATTGGAAGCTAATTTGAAAAGGTTTTACTGGGATAATCTTTCGTGATT
GAAAACGGAAATCACTCCAAATTATCACTACTTACTTGCCTAAAAAAGAT
ATCCTTTGTCTCTTAGGAACTTCCTGAAAGCATTTTTGCATGTGTAAAGC
TCACAATTCTTCAGTTAGAAATCTTTATGATTGAAAAACGGAAATCACTC
CAAATTATCACTACTTACATGCCTAAAAACGGAAAAAtgtgttatgtttt
attttgattttggttaCACATCTCAAGGCTGTTTCATTTACatgcctaaa
aagatattctttgTTTCTTAGGAACTTTCtgaaagcattttttcatgtgC
AAAGCTCATAATTCTCCAGTTAGAAATCTTAAAAACGTACTCCATATAGA
AAGGAGTGTTGTAAGATGTTGTATATGATTTTATGATCTGCTTACACTTT
AAAGCTTCAAATTCTTTCTCGGAGCTAAAGCAGGTCTGTAAAATCTGTCT
AAGAGgtgtttttgtttatcttttctttatgaaaaatactctacacgttt
tttttttataaaacgtgTACAtatcttttaagaaaaattccACAGCCAAT
AGATTAAAATGTGACTTTTTATGGAAACAAATATGGTCGGNCAAAATCTg
tgtttttgtttatcttttctttATGAAAAATACTCTACAtatcttttaag
aaaaattccACAGCCAATAGATTAAAATGTGACTTTTTATGGAAACAAAT
ATGGTCgggttttcattttcttcattaTGAACATTTGGATCAATTTTTGC
CTGATATGCACCATCTTGTCCtgcttttttaaatttccaaagtgtcaaaa
atactgcttgaaaaaacttgcttttccgtgtgtgtgtgtgtgtataTATA
ATATTGATATCGCTTTTTAGGTTTATGCAACCTTATTGTAAAGCATCCGa
tttcttgatatgcgtaagtcaagattacgtcatttttcatatcagaaaca
cccaaaaacaccggaatttatatttttagtaACACTCAGGTGTTTTCGGG
TGtctccgataggaaaaatgacgtaatctcgAATTACGCATTTTAAGAAT
TACTAAAGCCTTCAACTAAGATTGCCATTAGAAATACCTGAAAAGTGGTA
TTTTTGGTATTGTCTAGTAAAAGTTATTTTCNTTCTATTGCCATTAGAAA
TACCTGAAAAGTGGTATTTTTGGTATTGTCTAGTAAAagttattttcttg
aaaatcaaTACACGGGCAACTTTGAGGCTTGTACCCTGAAAATTCCTATA
ACAAACAGTAAATCCAAAATCGGGTGCGGGTTACTTTTATTAAAAATGGa
tatcatataacattacattTTGAACTAGGCTTCTGCTTATTCTCTAGCTA
AAAGAGTTtcttatataggaagtatatctatagatgtctgcgattcagac
taacttTCAACCTACACTTGTCGGGAAAATTTATTAGCAGTTTCTGCTTA
GCTGACAGAGTCTCCTATTTTCGTACTTAAAATAAACCCTTTTTTTGAAT
AACAACTTGGATGTTTCCATGACAACCTGTTACATTAAATCCGTTAGACA
catcaaaacattgaaagtaaaatatttctcctTGACACCCAAACATCAGC
TTGCAAATAAAGTACTTGAGTTGAGACAGGCACATTCAAGCACTCTCTGG
AAGTACacgtcattttttataagaacaaactatacaagaacataaggctt
cggtggccaaaatgctaagaacaagttaagaaagttaagaacatccgaag
gcttcaaaaaattttgaaaaaattcttatacaaaaaaaacgtgtacattg
cATATAAGtagatgttttttataagcatactttttttgaaaacacgcTCA
GTTATGCTTAGCTTGTATTTTGGAATCGAGCTCAAATCATGTTTTTGCTT
ATTtcttctgaagaaaaaaaatggttcgtttaaaatggaaaagaaaaacg
AATTTTCCCAAGCACATAACCCATGACTTATGACCAAATGACCTCAATGA
AGCTCACTGACATGCTTATgatataagtaagtaagtctgcgaccgcagtg
agaagtgacccgaaggctcctctttcgatagctatctacctgaaggtagg
ggagggcgccactctttctccctggatttatCCACTTACCCtattgatcc
ttctcttaattgctagCATCAAGCAGaaccggatgctctaccactgcacc
acGGCTCGCTAATGATATActtattttttcaccaaatccaGGTGtcaagt
atgcttataaacgtgatgcttataaaaagaaaaatatcattgCTCAAAAT
ATAATCCTACGCTGAAAACTACTAAATAACTTCTTACTCCATAtcatata
cactttttttataagaacaaattatataagaacaaacttgaCACCCACAC
ATCAGCTTGCAAACAAAGTACTTGTGATAGGTACAAatatatttataaga
acaaactatacaagaacataaggcttcgatggcaaaaaatgttaagaaca
agttaagaaaaaaaattgggagagtcttattaaaaaacgtgtactcgaAC
TGAAGCCGATCTCTATTACATGGATGCCATACTtctctccataactcgaa
taaaTTGACGTTTCGTGTTCGTGTTATGGAGAAGTCATAGTCTAACCCAT
TCGCTATCTAATATCAGACTATTAATTCATCCTCTGGATTCTTTGTTGAG
ATTTTTGGCAGTGCATCCTTTTATTACCTCCGTTTTATCAGATGACCTAT
GATTTCGAAGTCCAAATTAGTTCAAATTAATAATAGTGGTTTTCTTTTTC
ACTTGTTTCAGTCTTTGCCAGAAGAAGATGAAACACCCTCCAAcgataaa
aacaacaacaaacgaAACGCTGAAATCACCATCGAGCCTCAAGAAAAAAC
CATTGAACAACGCCGACAAGAACGTGCCGAACGTCGTGCCAGTAGACGGA
AAGAATCTGACACACCGCCGTCAAGCGTTGAAAAGACGGTGACAGTTCAA
ACGTCCATTTCTACCACGGATAATGGAGTCGAAAATGTCAAGACCACGCG
CACAAGCCGTTTCTCGAGAGGCTCAACGAAGGAGAGTGAAAAAGTTGAAC
AGAAAACGGTGGAAGTCAAAATGGAAGCTAAACCTGTGAAGATGGAAGCT
AAAGAAATCAAAGTGGAAACAAAAGTTGAAGCAAAAcctgaagaattgaa
aaaagagGAACCTAAAAAAGTTATTGAGGAAAAAATTGAAGTCAAGGAGG
AAAAAACTGTTGAAAGTGCGAAAGTTGAGGAACCAGCGAAAGTTGAGGAA
ACGAGGAGAAGTTCGAAAGTGGAAGAAGCTCCTAAAAATGAAGTTAAAGA
TAAATTATcatctttaaagaaaaatcaatttgaaagtaACAAAGGTAATT
CAAGGAACAGGCCAGGCTCCATGGTAgacttcaaatcaaaatttgaaaac
aaatccaATACGAACGCAGTCAACAAAAGACCCGTCTCTATGAACATTAA
ATCGAAATTCGAACAAGACACAAAACCTGCTAATAAATTCGAACTTCGTA
AAACCACATCCGTTCCTTTGAAACCATCAGCGTTGAAAACCTCTACCAAT
AAAGTTGAATCCGATAAGAATGGAGTACACACAGAGAAAACCGTCACCAA
GACAGATGCAACTATCGGAGAAGGAGCCTCCAAGAAAGAAGTCAAAGAGA
TCAAGTCAGTGGAAACCAAAGACACGGCTACAACCCATGCTGAAAAAACC
ACCACCATCACAGAAACCAAAACTAAAGGAGGAAGCACTACTGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036699XLOC_036699Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058258-exon-scaffold_309-1491911889:602810..603093TCONS_00058258-exon-scaffold_309-1491911889:602810..603093Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1510915933:602810..603093TCONS_00058258-exon-scaffold_309-1510915933:602810..603093Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1575043694:602810..603093TCONS_00058258-exon-scaffold_309-1575043694:602810..603093Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1491911889:607248..607545TCONS_00058258-exon-scaffold_309-1491911889:607248..607545Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1510915933:607248..607545TCONS_00058258-exon-scaffold_309-1510915933:607248..607545Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1575043694:607248..607545TCONS_00058258-exon-scaffold_309-1575043694:607248..607545Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1491911889:615521..616504TCONS_00058258-exon-scaffold_309-1491911889:615521..616504Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1510915933:615521..616504TCONS_00058258-exon-scaffold_309-1510915933:615521..616504Clytia hemisphaericaexon
TCONS_00058258-exon-scaffold_309-1575043694:615521..616504TCONS_00058258-exon-scaffold_309-1575043694:615521..616504Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:602810..616504 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.674352	0.819813	0	0	0	0.314272	0.959356	0.34115	0	0.984781	0.597079	0.888296	0	0	1.22484	3.15135	0	0.525895	15.0535	15.8113	7.02347	13.9078	5.50302	7.68117	3.07562	2.63551	0.13867	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058258 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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