TCONS_00058262 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058262
Unique NameTCONS_00058262
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1686

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058262 ID=TCONS_00058262|Name=TCONS_00058262|organism=Clytia hemisphaerica|type=transcript|length=1686bp
TTattttgtaaacaaacaaaaaaaatcacttttacctaccattttccTGA
CATCAGCTGATCACAGCAAGTTGGCAAGTTGCAACAACCTGTCAGCTCTA
TCATCATGGAAGAATAGCACCGCCGAATGTACATCCTATACTCTCGGTTT
AACACTTTCTAATCATAATGGGTCTAACTGAGTGCAGACAAAAAGGAATA
GGAATCCTCCTTCATTATGAAACAGTCAAAATCATAgacataaaaaacaa
aaaagttggaGCTTTGTATCGATTCATCCAGCTCATAATTATCAGTTATG
TTATTGGATATGTTATAGTGTATAAGAAGGGGTACCAAGAATTCGACGTT
GCAATAAGCACGGTGACAACGAAACTCAAAGGAACCACTTATGTTGACTT
TGGTAAATTTAACTCAACACTTTTCAATGGAATTCGAATATATGATCCAT
CAGATTACGTCATACCTCCACAAGAAACAGATGCAGTCTTCGTGATGACA
AACATGATCTTAACACCAAAACAATCACAAAGCAATTGTCCAGAAGATTC
TAAATTTAAAGATATACATTGTAAAAAGGACAGTGACTGCCCTAAAATGG
TGCCGGTCAAGAACGGCAATGGTGTAAGGACTGGGAAATGTGTATCATCA
GATCGAAATTCATCAATGACCGTTTGTGAAATTTATGGCTGGTGTCCGAC
TGAAGTTGACCAACTTCCCATGCCCAATAATAATTTCAGTGATACAGTAC
CTCTTCTTGATGGCACAAAATATTCCACCATGTTGGTAAAAAACCAAATC
AGTTTTCCAAAGTTCCGCGCCATCAGgaaTAATATCATCCAATTCAACGA
CAGTACATATTTGAAACGATGTCATTATAATTCGGACACTGACCCTTTGT
GTCCGATATTTAACTTAGAAGACATCGTCTCTTCTTGTGGTGATAATTAT
ACAGATGTCGCTTACCAAGGTGCGATATATGGCATCATTATTGAATGGGA
CTGCAATTTAGATCATTCCATCGACGAATGTCTTCCAAAATATCAGTTTA
AGAGGTTGGACGATGTAAATTCGCCGATATCTCCAGGCTATAATTTCAGA
TACGCAGATTATTACGTTGAAGAGGATACACGTTATCGAGTTCTCACCAA
AGCTTACGGTATCAAATTCGAATTACTCGTCCATGGAAAGGCTGGCAAAT
TCAATGTGATTCCTCTCCTAACAAATCTTGGAGCTGGTATGGCGTTGCTG
GGCATTgcgACAGTATGGTGTGATTTCATTGTGATGTACTTGTTGAAGAA
AAGAAATGTTTATCGTGAACACAAATATCAAAGAGTTGATGATGACTCGC
AAGATCCGAAAGGAAATgTTGATGACGACGAAAATGAGTTGGAGAGCGAT
CGCCCTGAAGCAGAGCGTCTCATCAAACCATAGTGTAAAAGGATGTTTGT
TGGTTTTGTATTTTGGTGTAAACTTTGTTAAACGATAGACGAGTTGTAAA
cttatttagtaaaaaaaaactttcgaaaagtAACAGCTAATATCTAtgta
aaaataagattttattgGTGAAATGTTTCGATACACTCGAAAATGTAGTA
GGATaggaaaaagtataaaaatgaaacacctagcttttgtcaatttttta
ctaccatacattttttttaccaaaatatATACACGT
Run BLAST on NCBI

transcript from alignment at scaffold_309:662166..672147+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058262 ID=TCONS_00058262|Name=TCONS_00058262|organism=Clytia hemisphaerica|type=transcript|length=9982bp|location=Sequence derived from alignment at scaffold_309:662166..672147+ (Clytia hemisphaerica)
TTattttgtaaacaaacaaaaaaaatcacttttacctaccattttccTGA CATCAGCTGATCACAGCAAGTTGGCAAGTTGCAACAACCTGTCAGCTCTA TCATCATGGAAGAATAGCACCGCCGAATGTACATCCTATACTCTCGGTTT AACACTTTCTAATCATAATGGGTCTAACTGAGTGCAGACAAAAAGGAATA GGAATCCTCCTTCATTATGAAACAGTCAAAATCATAgacataaaaaacaa aaaagttggaGCTTTGTATCGATTCATCCAGCTCATAATTATCAGTTATG TTATTGGGTAAGTTTTTTACACTTCTTAACAGTTTTAAAATGCGTTCCTT GAAAGTCCTTGTTTTTCTTGACCATGGCATGGGTCTCCACTCTCAGTGAA GTGGTTGGAAGTAGTTGAGTTTTTTgatcaaaatcagttttttgtttata tcagacacaaataaaagaaatatattaaaaagacaaaagaaaatttttgg caTACAAATATCTTAAGACTGCAAACATGGGTTGCCATGAAACTttcaca aacaaacaaaaaagactttgaatgAAGAATCATGCCATCCatcataatag accttttttcaaagaggccaccctgttgaataattatgtagtccagcaga aaaacaatgctaaaaccatgcataattattacaatatgcatgatacagNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNatgcatgatacagtaattatgcatggctttatcattgtt tttatggctggactacataattattcaacaggacgtcctctttgaaaaaa ggtctatgcaaAATgaagaatgtttgaaaaaaaacgctTCTTAACGCTAT AGCCTATAGTGTAAACTTCTTAACGCTGTAGCCTATAGTGtataaatatt tcaaagtttGACCGTGGTTTCCTCGCTTGGTTGGTCCATGAAAACAAGAT GCATCTTTTGACATAGGTCTATATTGTTAAAAAGATTGTCTTTGGATGTC ATTTCATTGGTTTGAATCAGCATATGGTCACACTTTCTTGCTTTCAAAAG GATaacattatcaaaaaataaCTAGAATAAATTTTGGCTcgtgttttcaa aaatcaatctaAAATTGAACTACCACCCACAAACTGTCTCTCTCTACACT CTGCCACCCACAGTGTGGCTGGAACATAATACCCCAAACATTTTTTGGTC ATATTTATTGCAAAATATTGATCCAAAACTTTGGATTTTCGACTCTGAAA ACCTGGCCCGAACATGCACATTCGGTATATATGTGAATAGAGCGgcaaaa aatacaacttttctatttttccttttttgtaaaagttccagaaatgaaaa taaaatgataatgataattgaatactatccactgatgatcagATAAAAGT TTTTCTCCTGTGCAGGAGCTCGCAGGCACTCTGTGAGGCTGGTTTTTCTA TGTTACATTGTTATCCGTTATCAAACTATGCAAACACATAAATTAGCATT TCTTATATTATTatgaattttattattattttggagTATGAATTGAAGTT GCCGAATCATCTAAGCTGAAATGTGTTTAAAAGTGCAGATGTCTTGAATT CGGGACTTTGGATGTCAATAACTTAGGATACAGTAGAATCAATGTTGATa actttgaattgaatttttcaaattcttttcatgATAGCTATTCataaatt aagttttttttatgcAGGAATCCCTTTAAAAATCTTGTTAATTTATACTG TTAACTTTTTAGCTTcaaaatttgttctttttttgggttttatctaaaaa gtttttactttttgagAAAGTGAAAGAAATTGGCAAATTTGAGCCCTCAA GCCTTAGGAATCTGGTTGATTATAACTAAAAATGTATACtctctctttca ttttgaaattcacAAAACCTAGTCTGGCATATCACAAATTGTCACAAATT TTGTTGACATAGTGATATGAATTACATATTTTTGGAATCATGTTAATGAG CTCTTAAGAATAAAATCACaagtttcattaaaaaattccacatattaatt cccctttaaatgaaaatttctagAGGGTTAATTTTTTATAGGCCAGCATA TTTTGTCTTAAGaacagaaaacaaaacaactcatgttaattttttgttgt gCTAATTTCAAGTCTGTTGAATACTTTACCTAATACCTATTTTCACGAAT AGAAATTTATGTAACAAagcatttttataatttttttcttttccacaGAT ATGTTATAGTGTATAAGAAGGGGTACCAAGAATTCGACGTTGCAATAAGC ACGGTGACAACGAAACTCAAAGGAACCACTTATGTTGACTTTGGTAAATT TAACTCAACACTTTTCAATGGAATTCGAATATATGATCCATCAGATTACG TCATACCTCCACAAGTATGTTTCagattcaatagaccttttcataaatta catcacgaacatcacttgcctcgtattcaaacaattaccatgatgatcat gtcccttgagacattaaatgttttttttataaatagaaagtagttttaat aaaacccactgggagttaatcaccatggcaataatttcaaaacgaggcaa gtgatgtttgtgacgtgaCTTATAAGGTCTATCCCTACTTTATCTCTATT TGTATTTGTAGCTGTATCTAATAAAAAAAGATGCTGTAAAACTTTATAAC AACACAATGCTCTACAGAACTTGCaataattgattttaaaaataaattta taaaattcTATTCTGTTCTTCGAGATTCAAACAAAGgtgtattaaaggtt ttgtttttaaaataagagtgatatcatttacttactcatcaattttaaat cacaagtttttttcacattggattgacacagatgtggagcaagattggtc agaaagaggaaaagaaaaacctttttttgcttatatcagtataacataac aataggcagacactgtcctgatatgaaatatgtgtctgacaatatacggg aacacttatgtaaaaacaaaacctttaattattttactgtttttaagttt acaattttatttcattatattatttcgtagaggtcgatagacctttgaag tataattctatgaataaataaataaatcttaCTTTTAATTGTAGTCCGTA TAAGAAgccctggtctggaagccttttgttccaTTCTATTGTTGCGagct tgaacttgcgttgagaaattctttttttgatcatgtgattaacttttgag ccaatcctgagtatttggtaacgtgatcaaaaactgagcaaatcgatttt tataatcgttattaacaaaggaaaaagttaataaaaagttacaacaatag gcttccagaccagggttttttatacggactatcatttaatcaaaaagtaa tatattttagttctttctttcttgtttATTACAGGAAACAGATGCAGTCT TCGTGATGACAAACATGATCTTAACACCAAAACAATCACAAAGCAATTGT CCAGAAGATTCTAAATTTAAAGATATACATTGTAAAAAGGACAGTGACTG CCCTAAAATGGTGCCGGTCAAGAACGGCAATGGTAATCAACCTTTATTAT AATTAGAAAGCTTCTTAAACTCGATACTCAACTCAACCTTGTTTACTGTA AGCCACGGGGGACGTTGGGAGGATACAAATAGGTGTGCGATAATTTTTAC TGATTGGAGGAGaagtaacctgataacagctgttcgtaattttcttacgc gcgcggtaaacctctgaaggcgcttgaaaatcatacagctgaggaaaata gtcctcccgcgaaaatttctacaacaagaatcttgttgtgcgccggaaag ttgaaaactgatacggcgccctattcataaacacaatcacgcaactttgt tgtccaaaaactgagcctgcatatgcttataaacgttatgcttataaaag aaaaaacatgtacattATAAACAATACAAAGATGAAATACAAAACGACGC AATAAAATCGAATACACTGAGACAAAAAGAGACGCAATCCCAAGTGACTG ATGACGTAATATAAAATTGACATTcatcaaaatatatcaaaacaaaggct aGCGGCCGTCACATTTTCCATTTCTATAGCTCAACCAATTTACCTAATAC TTTGCAACTTAATACAAAGTGAAGAAACTTTAAGAGTTTCCGCAAATTAC TGTCTACAAATGCATAAAACTTTGTAATCAAAAGTTTGATTATCAAAATG ACAACTTGTAACTTTCCACTCGTAATTTTGAAGTAATTTTATTGTACTTA ATAATCTTATTGTACTGATTAAACATCGATTGTATTGTATTTCTCCCTTG TAAAGGTGTAAGGACTGGGAAATGTGTATCATCAGATCGAAATTCATCAA TGACCGTTTGTGAAATTTATGGCTGGTGTCCGACTGAAGTTGACCAACTT CCCATGCCCAATAATAATTTCAGGTAAACAAACATATCAACTGCTTTCAA GCAGCATTTTTGATTGGCACTGCCCACGTGTCAAGCACTTAGTagatttc aagtttttgtttactgtTATATTTTTGTTCcataaactttttcaaactta ttttaCAGTGATACAGTACCTCTTCTTGATGGCACAAAATATTCCACCAT GTTGGTAAAAAACCAAATCAGTTTTCCAAAGTTCCGCGCCATCAGGTAAT CTGCAACTGAATGTTCCGTCATTTTACCGTTTTCCTTGGAGGTTCaaatt tgtttgtttcttaAAGTTATTATCACAAAGCTTTTAATGGAAATTCTatc tgaaactttaaaatatCTAATATTGTCCTAAACAAATAGATCACTAGCGA ATTCACTCACTGTATTGAAAAATCGATCACAAGGAGTAAAACCGAGGCAT GTACTTTTTTAATGGGAAAATtttcgcagggattaaatttcgcggttggg ctcATCAGCGAAATTTTgagatttcgcggggacttaattctCATGATGTT GTGTCTTTTTACTGCCAAATTATACAtactggttgttgaaatacgcattc TCCATTGGGACTAAATTTATCCCGAAACCCCGAAATCCTCGAAATTTAAT CCcagcgaaaatttatcccattacgGTGGTTCCAGGGGAACTAAATggtg ttttttgacattttttgtcaaaatacagTTTTATATATCGCTGGAAAGCT TATTCGCTCTTCTGCTTTAAAGTATCTGACAActtaatcttttcttcagg aaTAATATCATCCAATTCAACGACAGTACATATTTGAAACGATGTCATTA TAATTCGGACACTGACCCTTTGTGTCCGATATTTAACTTAGAAGACATCG TCTCTTCTTGTGGTGATAATTATACAGATGTCGCTTACCAAGTATGTTGC ACCTCAACCTTCTCCTttaagacacccccttctcacagatcaaCTGGAAC CCCTTCCAAATAGAAAAATCGGCTAGAATATcgtcccagtggaaaattat ccttcaTTAACCTTTGAACAATATCCGTATGCTGCCGAGTTTACGTACTG AATGAAATACTGTATGACTCTCGTCCGatatttctattttctatatTGCC TGCTctttaaacacccccttctcacagacccactggaaaaattggctaga ATATcgtcccagtggaaaattatcctttaatttttgtccccactgaaaat aatcaaataaaacagtcctcactgcaaaatattatgctatttttctcatc ccactgaattttctgacttgtaaacaaaagaatgaaatccccagccataa aaaaatatgggaatatcaattccTATTGAGTTTCAGTCCGATATTTTTAT CCGCATTGGCttaaaaaatcctaccgggtctgttaGAAAGAAGGGGATAA TGTGGAACTTATTCGTCGTAAAAAGTCGTTTCTGGGGCCGACCGacagtg actgtaccacccctacggattcattcctctttgtttatcacgggaatcaA CTGCATGtggtttaaagaacgacaaattacgcatgcgtgttacaatccag aattctttagaggaacagactgatCGAACAAAATTTCAATCGGACGAAAA TTTGGTTTGAAAAGtgacttttttttctctttttcatctCTAGGGTGCGA TATATGGCATCATTATTGAATGGGACTGCAATTTAGATCATTCCATCGAC GAATGTCTTCCAAAATATCAGTTTAAGAGGTCTGTTCTCAAAGATATTCg aattgaatttttcaataaaatctttCCTCGTGCAATTATATCCTTCTCTT TCtgaagcgaccgtagtgcactggtagagcatccggctccggttcgcaag gttgtgggttcaatcccctgCCGTGTGaaaccaaagatttccaaaatggt attTGATGCCTCTCTTCTTGATGATTAGCAATAGACCTTAtctgagtttt tgatttttctaaaatagcGATGTAttgtgtattacaatagaaatctctta ggaattcctcgagggaattctattgtaatcaatcagaaacaatcccacaa tgcatcagtttttcagaaaaataaaaaactccgataataTCTATTAAGAG AAGTATCAAGGGTAGGGTAGAtggctatcgaaagaggagccttcgggtcg cctctgactgcggtcgcagacttactactACTTTCTGAGGACTACGAACC GACGGATGTATAACTTTTCCTTCTACTTACACCCTTAACATTTCTTTATG ACTAAATTCAGCAAAATGTTATTTTCGTAAGTTTGCGAAAAAGTGGTCAT GTTATTTTCCTATACTTCTTAGGTTGGACGATGTAAATTCGCCGATATCT CCAGGCTATAATTTCAGGTTAGTGACTACTTACATCCAAACCCTTTATAC TCCTCCGTTGACATAGAACAGCATAGAAGTGCAAATCGATGTTTGAtcgg gctattccagaaatagtctatgccctctatgttgaggaggtgtgaggTCT AGTGTggcctggaaaataaaaaatccagagtgttcagtaaaatgaggtaa ataatcgagggtggtccaaaaaatgagGAGAAAGTTCAAGGGGgtcctaa aaaattgaaaatataatcccaaaaaagacctcctcaacattagggataaa atttttttctggaatagcccattggtGGATTTCCAGGaatgtcaaaatgt caaaataacatAAAATGCGTGTAGTAGAGATTAGAATTTTGTTCTAGATA CGCAGATTATTACGTTGAAGAGGATACACGTTATCGAGTTCTCACCAAAG CTTACGGTATCAAATTCGAATTACTCGTCCATGGAAAGGTCAGCGctatt gaataattaaataatttttatttgataaatatCGTGGCTGCCAACGGCAA CGAATCTTTTTCCCGTCCATTTTGCTGAGTTTGCAGCGGTAGGAACCTTC TCACGACTTATAACTTAAAGCCCGTTATTCCATTCAAAACTCATACAGAG GGTGGACGAatcttttcaagcaaaaaaataattcttgaaaatgtgTGGTT ACCTCCtcgaaaattgcaaaatttgcaaaagacccttggaaaaaatcttt cattcCTTAAAGTGGAGTGTTGACGAACTTAAACCAGTCTTTTGGCCCtt gcaattttcaaaatattttttaccccctgaaaaatagaaaacctTTCCTT AGacacccctggaaattcttcttctGGAAAAGTTCGTCCGCCACCTTGTA TGGATATAAAGTGGAATGGCCCATTCTGCCCTTTTCTGTATCATTTATGC TAACCATTCACAAGTTTCAttttgggacgagatggagtttttacaagctc ttattcgatttggttggtcgttaaggctgtcatttttttaaagaacgtgt catttttattacttcaaatgaccaatttattaaagtatcttataaaaact ccatctcatctgttcATTTTACCATTAGGCTGGCAAATTCAATGTGATTC CTCTCCTAACAAATCTTGGAGCTGGTATGGCGTTGCTGGGCATTGTAAGA TTATTTGATCGTTTTTCGATTtccgtttttttaagaaactagttttacca agcagcctcaatagttctatttatactgagacgattaatttgtctgaAAC GAGCTATTTAGAAAATGatggaggagtgtactttccattcatgtttcaat aaataggatctcctccacagatcacattttacaaactactcgtctcagac gatttttccgtctcagtataaatagaactaatgtttcttaagaaatcggc cttttgagctttaaatgtttcttacatgtttctaaactttttgacataat cagcctatttttcatggaaagaaaaaaaccattgttttgattggaaggtt cttaaaaatgttattttctcattctcagccttaGCATgatcttagatgtt tcttagtttttaggcattctgagcctcatgtttcttaaaagtgtgttttt tTTAAACGTGTATCATTTGAAGAGGCAGCCTTGAACAGAATATCCAAATA TACcttatgttttttttcagtGGTAAAATAATTGAGCTAGCAGATGTAGA CTTTTCGCTGGGGAGAATTCCTgaattttttatcctttttatcAAGTTGA TGGTTGATGCGGGGGTGTAAGACTTTCTTTAAACTTATAAGTACCCTGAG AGCATTCACTTCTATTGGAAGGCAGTAGCGTTCTCAGGGATGTCGGAAAA TTTATGTAGGAGAGCACAATTTTATTATGAAGTAATTATCTTTCAATGTT ATCCTACATTGGATATCTCCTACACAAAATGATTTTTACATGGATCTCTC CTATTTTCTACACAAATTTTCCGACACTCCTTAGCTACTGGAAGGTTGTT CTGACAATTCACACCactttcaattcaatttttttccaggcgACAGTATG GTGTGATTTCATTGTGATGTACTTGTTGAAGAAAAGAAATGTTTATCGTG AACACAAATATCAAAGAGTTGATGATGACTCGCAAGATCCGAAAGGAAAT GTACAGGTCTTATTTCTCCTTTCatgttacacccctgtctcacagccccg gtggaactttttccccagtggggataaaaattcctcttaaaatcctaatg gggatagagattctattgttccaaggttaaaaaattcaatggggatggtt ttgcaCAGCAAATTTCGAACACGAAATTTCGAGTGGGATGAAATCacagt caatttcccagtggggctgaaattcaagtgtattttcccaccgaggatga aatttttgcttaattttttcagtggggctggggtccagCGGGtgtgtgac acaggggtgttttatttaaaaagcattttcaaaacatttattcATAAAGA ATTGGTTTTTACATGCATTTCCACTGGAAACAATTGTTTAACCTGTGTCT TTCGCCGTACTATTTTCATGAACCTTGACCGAATCTTAAACAATAAATAA CCCATCGAAAATCATCGACCTTTTAAAGATATCTTCTAAGTAATctatat ttttctttatcaggTTGATGACGACGAAAATGAGTTGGAGAGCGATCGCC CTGAAGCAGAGCGTCTCATCAAACCATAGTGTAAAAGGATGTTTGTTGGT TTTGTATTTTGGTGTAAACTTTGTTAAACGATAGACGAGTTGTAAActta tttagtaaaaaaaaactttcgaaaagtAACAGCTAATATCTAtgtaaaaa taagattttattgGTGAAATGTTTCGATACACTCGAAAATGTAGTAGGAT aggaaaaagtataaaaatgaaacacctagcttttgtcaattttttactac catacattttttttaccaaaatatATACACGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036701XLOC_036701Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058262-exon-scaffold_309-1491911889:662166..662472TCONS_00058262-exon-scaffold_309-1491911889:662166..662472Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:662166..662472TCONS_00058262-exon-scaffold_309-1510915933:662166..662472Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:662166..662472TCONS_00058262-exon-scaffold_309-1575043694:662166..662472Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:664514..664679TCONS_00058262-exon-scaffold_309-1491911889:664514..664679Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:664514..664679TCONS_00058262-exon-scaffold_309-1510915933:664514..664679Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:664514..664679TCONS_00058262-exon-scaffold_309-1575043694:664514..664679Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:665700..665847TCONS_00058262-exon-scaffold_309-1491911889:665700..665847Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:665700..665847TCONS_00058262-exon-scaffold_309-1510915933:665700..665847Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:665700..665847TCONS_00058262-exon-scaffold_309-1575043694:665700..665847Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:666621..666738TCONS_00058262-exon-scaffold_309-1491911889:666621..666738Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:666621..666738TCONS_00058262-exon-scaffold_309-1510915933:666621..666738Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:666621..666738TCONS_00058262-exon-scaffold_309-1575043694:666621..666738Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:666874..666960TCONS_00058262-exon-scaffold_309-1491911889:666874..666960Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:666874..666960TCONS_00058262-exon-scaffold_309-1510915933:666874..666960Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:666874..666960TCONS_00058262-exon-scaffold_309-1575043694:666874..666960Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:667515..667656TCONS_00058262-exon-scaffold_309-1491911889:667515..667656Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:667515..667656TCONS_00058262-exon-scaffold_309-1510915933:667515..667656Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:667515..667656TCONS_00058262-exon-scaffold_309-1575043694:667515..667656Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:668409..668494TCONS_00058262-exon-scaffold_309-1491911889:668409..668494Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:668409..668494TCONS_00058262-exon-scaffold_309-1510915933:668409..668494Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:668409..668494TCONS_00058262-exon-scaffold_309-1575043694:668409..668494Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:669088..669132TCONS_00058262-exon-scaffold_309-1491911889:669088..669132Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:669088..669132TCONS_00058262-exon-scaffold_309-1510915933:669088..669132Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:669088..669132TCONS_00058262-exon-scaffold_309-1575043694:669088..669132Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:669513..669603TCONS_00058262-exon-scaffold_309-1491911889:669513..669603Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:669513..669603TCONS_00058262-exon-scaffold_309-1510915933:669513..669603Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:669513..669603TCONS_00058262-exon-scaffold_309-1575043694:669513..669603Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:670244..670309TCONS_00058262-exon-scaffold_309-1491911889:670244..670309Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:670244..670309TCONS_00058262-exon-scaffold_309-1510915933:670244..670309Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:670244..670309TCONS_00058262-exon-scaffold_309-1575043694:670244..670309Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:671205..671315TCONS_00058262-exon-scaffold_309-1491911889:671205..671315Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:671205..671315TCONS_00058262-exon-scaffold_309-1510915933:671205..671315Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:671205..671315TCONS_00058262-exon-scaffold_309-1575043694:671205..671315Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1491911889:671829..672147TCONS_00058262-exon-scaffold_309-1491911889:671829..672147Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1510915933:671829..672147TCONS_00058262-exon-scaffold_309-1510915933:671829..672147Clytia hemisphaericaexon
TCONS_00058262-exon-scaffold_309-1575043694:671829..672147TCONS_00058262-exon-scaffold_309-1575043694:671829..672147Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:662166..672147 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
67.0207 74.6383 32.1038 22.9827 22.7362 11.8584 37.5847 34.6458 49.9997 33.6331 61.7419 35.5904 69.5979 60.8621 68.7418 73.5995 27.27 33.8176 39.1498 50.8643 26.997 21.0793 28.7898 37.3924 31.9468 33.4348 13.0147 13.0734 38.0875 39.3915
Blast
BLAST of TCONS_00058262 vs. Swiss-Prot (Human)
Match: P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2)

HSP 1 Score: 328.561 bits (841), Expect = 2.028e-106
Identity = 184/405 (45.43%), Postives = 254/405 (62.72%), Query Frame = 3
Query:  174 LTECRQKGIGILLHYETVKIIDIKNKKVGALYRFIQLXXXXXXXXXXXXXXXXXQEFDVAISTVTTKLKGTTYVDFGKFNSTLFNGIRIYDPSDYVIPPQETDAVFVMTNMILTPKQSQSNCPEDSKFKDIHCKKDSDCPKMVPVKNGNGVRTGKCVSSDRNSSMTVCEIYGWCPTEVD-QLPMPNNNFSDTVPLLDGTKYSTMLVKNQISFPKFRAIRNNIIQFNDSTYLKRCHYNSDTDPLCPIFNLEDIVSSCGDNYTDVAYQGAIYGIIIEWDCNLDHSIDECLPKYQFKRLD--DVNSPISPGYNFRYADYYVE-EDTRYRVLTKAYGIKFELLVHGKAGKFNVIPLLTNLGAGMALLGIATVWCDFIVMYLLKKRNVYREHKYQRVDDDSQDPKGNVDD 1376
            +  C       L  Y+T +I+ I+++KVG + R +QL+I++YVIG+V V++KGYQE D  +S+VTTK+KG    +  K       G RI+D +DYVIP QE +++FVMTN+ILT  Q+Q  CPE      + CK D+ C       + NGV TG+CV+   N S+  CE+  WCP E D  +P P          L   +  T+LVKN I +PKF   + NI+    +TYLK C Y++ TDP CPIF L  IV + G ++ D+A +G I GI + WDCNLD +   CLP+Y F+RLD  DV   +SPGYNFR+A YY +      R L KAYGI+F+++V GKAGKF++IP + N+G+G+ALLG+ATV CD IV+Y +KKR  YRE KY+ V+D  Q     +D 
Sbjct:    1 MAGCCAALAAFLFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVIPAQEENSLFVMTNVILTMNQTQGLCPEIPDATTV-CKSDASCTAGSAGTHSNGVSTGRCVAF--NGSVKTCEVAAWCPVEDDTHVPQP--------AFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYDAKTDPFCPIFRLGKIVENAGHSFQDMAVEGGIMGIQVNWDCNLDRAASLCLPRYSFRRLDTRDVEHNVSPGYNFRFAKYYRDLAGNEQRTLIKAYGIRFDIIVFGKAGKFDIIPTMINIGSGLALLGMATVLCDIIVLYCMKKRLYYREKKYKYVEDYEQGLASELDQ 388          
The following BLAST results are available for this feature:
BLAST of TCONS_00058262 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P2RX42.028e-10645.43P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S... [more]
back to top