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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058267 ID=TCONS_00058267|Name=TCONS_00058267|organism=Clytia hemisphaerica|type=transcript|length=703bp
ATTACTTATCTATGTTATAGGTCCCAAATGGTGCATCTGAGCTATCTACC
AATTATATTGCACAAAATATTATCGAGAAAGTGAAAAATGCTGCAAAGAA
AGGCCCATTTTGTCAAGATTGTGTCGCCGAGTCTCCTGCTTCAAACCATT
GCGAAACTTGTGTTTTGAGTTTATGTAAAAAATGCACTGAATATCATCAG
AGTTGTGTTCGCTTTGTTGGTCATAAAATTATTGACATACAAAATGTCAC
AAAGAAAATGTGTAGTCCGAAGCGTTACTGCCCGAAACATAACGAgctgt
tgaaatatttttgtgagCAATGCAAGGTGGTTGTTTGTACTGATTGTATG
GTCAGTGTAGAGCACAAACAACATAACATCTCCTTGGTGTCAGAAACTAC
TGCCAAAGCTAAAGAGGAATTGAAGCAAAAACTTGAAAAGATGAAAGACA
AGAAGCAAACAATGGATGATTGTCTCCAACAAGCAAAGGTTTTTTATAAA
GATGTTATAGATGAAGATAAAGTGAACGTTGAATTAATCAAGAAAACGTT
TAACGAAGTGCGAAATATTCTCGCTGAAAAGGAAGAGCAGCTCATTGCTC
AGGTTCAAGCCCAAAGCATGTTAAAAGGTGAAAATCTTGATAAATTCTCA
AAGGCTGTTCATGCAGTCACTCAGACAGTAAATTATATGGAATCTGTCGT
GAA Run BLAST on NCBI transcript from alignment at scaffold_309:64625..68094- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058267 ID=TCONS_00058267|Name=TCONS_00058267|organism=Clytia hemisphaerica|type=transcript|length=3470bp|location=Sequence derived from alignment at scaffold_309:64625..68094- (Clytia hemisphaerica)
ATTACTTATCTATGTTATAGGTCCCAAATGGTGCATCTGAGCTATCTACC
AATTATATTGCACAAAATATTATCGAGAAAGTGAAAAATGCTGCAAAGAA
AGGCCCTTTCTGTCAAGATTGTGTCGTCCAGTTTCCTGCTTCAAACCATT
GCGAAACTTGTGTTTTGAATTTGTGTAAAAAGTGCACTGAATATCATGAG
AGTTGTGTGAGGTTTGTAAGTCATAAAATTATTGACATACAAAACGTATC
TAAGAAGATTTCTAGTACGAAACGTTATTGTCCGAAACACAACGAGCTGT
TGAAATATTTTTGCCAGCAATGCAAGGTTGTCGTATGTAATGATTGTTGT
ATGATAAGTGCACAACATAAACATCATGATATTACATTGGTGTCGGAAGC
TATAGACAAAGCCAAAGAAGAATTAAATCAAATGCTCAAAAAGATGAGAG
AGAGTGAGTTAACAATGGTTGACTGTCTTGGGGAAGTCAGAGAATTTCAC
CAAAAAGTTGCTGCAGAAGAGGAAAACAATGGTAATATGATCAAACAAGC
TTTTGATGAAATAAGAGTTGTTCTTGCCAAGAAGGAAGAAGAATTGGTAA
AACAGCTTGCAACAATTAGAGTAGACAAAAAGGAGAAGCTTAAATTTGAC
AGATTTTCAACAGCAATCAGCAAAGTTTCCCAATCGGTGCAATATGTTGA
ATCTATCCTGAATGAAGATTGTGATGATCTAGATATCATATGTGATCTCA
CGAAACAATTAGATGAAATCCGCAAGGAATACAGTTTGAATGGTACATTT
ATTGTATCTTCTACACCTTTATATTTGCCATCGAAAGGAAAAACAACGAA
ACCGACACTTCTGAACCTCAAGAATAATGCAATATTAACACTGCATCATA
AAAATGCTGACTCAGGAAGCTCGCTGGGCTTTGATATGAGCTTCGAAAAG
TATTCACACAATCTTAGCAGGAATACATTGATATCTGAGCAAATAAGAGC
CTTGTCATTATCATAATAATTTTTATAACCGGTATTGGATGATAATTATA
AACAAAATATAGTAACTAAAACAATGAGAGGTACATACATACACAATCAT
ATACCAGTTATATTTTGAATACTTATGGTTCTTTGTTTTATAGAATTTTG
ATATCGTATATTTTATAGATATTTGTTGTTGTTTTTTTATCCTGTTTTTA
TTACCACAATTGATATTCTATCATCATTTTATATACCAATCCAAAATAAT
CTTTAAAAAAAACTGTAAATTTATGCTCAGTCAATCATCTAGATTTATAA
GAGAAAATATACATACATCTGTAAAGGAAAAATATAAATGAAAATTCATT
TATCATTTTTCCCTTTCAAAGTTACTAGGAATTTTAAATATAAATTTTTT
GAATTTTTCTATAATATGAGATTTATTTAGCACAGGCTGCGTATGGATAT
ATTTTTCAAGCTCCTTTTTTTAATTCTAGCATTTGAAAAACATTAATTTT
CGTACAACAATGTTTTTATGAACAACTAATTTTTATAAACTTTAAATTCT
ATTTTTCAGTAAATAACGAAAATATTACAATTAAACTAAAAATAACTATG
CTTATTACTTGTTCATTATTGTTTCATTGTTTTGTTGTTTTGTTTGGGGT
ATCAAAAGATTAATGAATTTGAAAGATGCATGAGAGTTACAAAGTTACTT
TTATGGTCGTATCCATCCTTAGGATAAACCGGAATTCAGTCATTGTTTCA
ATGCTGTCAGAAGTTTCACGAATATTATTTTCTTTACACAAAAGAAAGAA
TTTGTAAAATGAAGGGTTGAAACAGGTTGAAAAAGCTCTGCCTAATTGTC
ACTTCTTCTCGCAAATTCTCAAATCTAAGTGTCCCTTGATAATATTCAAC
AGTAATAATCTTTTATTATTCTATTAGACAAAAAGTGGAAAATACGAAAA
AATAAAATGAAAAAGTAAATAACATAATACTATCAGCTGCTTCCAATATA
TAATCCTGAACTGTCACTAGGGCTGGTGTGGACGTTGGACAAGAGTTGGA
ATGTTGCGTTTGTTTGGATCAATTAGTAAAACCAAAGCTTTTGAATTGTA
TGCACACTTTATGTGAGGGATGCATCGACAAACTCATTCAGAGTGGAACT
GTTAAATGCCCTGAATGTCGAGAAGAAACCAAGGTTTGTTTCAATATTTT
AGTGATCTTACTGAATGTTACTTTTACTATAAGATCAATAATAAAAACAT
CGTAAAACATCACTGGTGTCTGTGATGATACAGTGCAGTCAGAACAATGC
ACCTATCAAGCTTAAACAGCAAGGTCATGAGGAGGACTGGTAACAAATTT
ACAGAAAATTATTTTTCAACACGTGCTTTTCCAAGCGATATGTTCAAACG
AAAGCAGCTCAGAAGCTTATCCTAGCCAAAATTCTATTCCCGTTGAGGGA
ATCTCTATGGTGGAGCCCAAACAATTTCTAGCCTATTCATGCGTTTGAAC
TGAGCCATTCGCCTATAGATTGACGTAAAACAGATGATATATTTATAAGA
GATGTGTGTCGTCGGCGCTTTTTTCTAGCTCTCTATTTAAGCGATTGAAA
CAACAACATTAGATAAATGGAAATATTAAAAAAAATTGCTTCTAGACTGG
ACAATTAGTATATCACTAAAGATTAGTACTCTTACTATACTACTTTAACT
TTACATTTTTCACCATTCTCCTCTCAAGCTTGCCCTGCGCCGCTTAAAGG
TTTATAGGTGTATATAGATTACTTATCTATGTTATAGGTCCCTAATGGTG
CATTCGAGCTATCTACCAATTATATTGCACAAAATATTATCGACAAAGTG
AAAAATGCTGCAAAGAAAGGCCCATTTTGTCAAGATTGTGTCGCCGAGTC
TCCTGCTTCAAACCATTGCGAAACTTGTGTTTTGAGTTTATGTAAAAAAT
GCACTGAATATCATCAGAGTTGTGTTCGCTTTGTTGGTCATAAAATTATT
GACATACAAAATGTCACAAAGAAAATGTGTAGTCCGAAGCGTTACTGCCC
GAAACATAACGAGCTGTTGAAATATTTTTGTGAGCAATGCAAGGTGGTTG
TTTGTACTGATTGTATGGTCAGTGTAGAGCACAAACAACATAACATCTCC
TTGGTGTCAGAAACTACTGCCAAAGCTAAAGAGGAATTGAAGCAAAAACT
TGAAAAGATGAAAGACAAGAAGCAAACAATGGATGATTGTCTCCAACAAG
CAAAGGTTTTTTATAAAGATGTTATAGATGAAGATAAAGTGAACGTTGAA
TTAATCAAGAAAACGTTTAACGAAGTGCGAAATATTCTCGCTGAAAAGGA
AGAGCAGCTCATTGCTCAGGTTCAAGCCCAAAGCATGTTAAAAGGTGAAA
ATCTTGATAAATTCTCAAAGGCTGTTCATGCAGTCACTCAGACAGTAAAT
TATATGGAATCTGTCGTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058267-exon-scaffold_309-1575043694:67993..68094 | TCONS_00058267-exon-scaffold_309-1575043694:67993..68094 | Clytia hemisphaerica | exon |
| TCONS_00058267-exon-scaffold_309-1575043694:64625..65225 | TCONS_00058267-exon-scaffold_309-1575043694:64625..65225 | Clytia hemisphaerica | exon |
| TCONS_00058267-exon-scaffold_309-1510915933:67993..68094 | TCONS_00058267-exon-scaffold_309-1510915933:67993..68094 | Clytia hemisphaerica | exon |
| TCONS_00058267-exon-scaffold_309-1510915933:64625..65225 | TCONS_00058267-exon-scaffold_309-1510915933:64625..65225 | Clytia hemisphaerica | exon |
| TCONS_00058267-exon-scaffold_309-1491911889:67993..68094 | TCONS_00058267-exon-scaffold_309-1491911889:67993..68094 | Clytia hemisphaerica | exon |
| TCONS_00058267-exon-scaffold_309-1491911889:64625..65225 | TCONS_00058267-exon-scaffold_309-1491911889:64625..65225 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_309 | supercontig | scaffold_309:64625..68094 - |
Blast
The following BLAST results are available for this feature:
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