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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058399 ID=TCONS_00058399|Name=TCONS_00058399|organism=Clytia hemisphaerica|type=transcript|length=422bp
AGAAAGATAGCTAAGACAATGTGGAGAAGACACCTCAAACCAAACCTAAA
GCTTAAGCCTAGAACAGAAACTTGTAtgttggctaagaacattgccAGTA
AACCAAGGCCGTCAACAGAAGTATTGATAGAGAGGCATACTGCAAGAGCT
AAATTGCAGTTTGATGTTAAACAATCAACAACAGTAGATGTACCTCCACC
TCAAGTTGGCCAATCCTTTGCCGATGAACTTAGTGAaagtgatgaagaag
aaaacagaaATGGGGAAGATAGTGAAAACTCTGAAACTGACTagattttg
tatatattttagtGGGGGGTATTTGATagcaaaaaaattggcacccaagt
tattttgattctcCTACCCCTAATAGCTAATAAGCGTTCCAAAAATGTTT
CTTCTGTCAGTTGACATAAGGC Run BLAST on NCBI transcript from alignment at scaffold_310:198798..201393+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058399 ID=TCONS_00058399|Name=TCONS_00058399|organism=Clytia hemisphaerica|type=transcript|length=2596bp|location=Sequence derived from alignment at scaffold_310:198798..201393+ (Clytia hemisphaerica)
AGAAAGATAGCTAAGACAATGTGGAGAAGACACCTCAAACCAAACCTAAA
GCTTAAGCCTAGAACAGAAACTTGTAtgttggctaagaacattgccAGTA
AACCAAGGCCGTCAACAGAAGTATTGATAGAGAGGCATACTGCAAGAGCT
AAATTGCAGTTTGATGTTAAACAGTaagtatttttacattttttcgacga
gtcaaacaaaaaatgttggaTTGTTGTCAATTGACTGACTctattcaaaa
attgcaatataaaaaataggaaaaatataaaaagatcaaataagaaaaat
ttataGCTACAACAATGATATTTTTAAGAGAACAATTGAAAACTAGGTTA
CATGTCATAATAATCTGCATCTAAAAAACCTGAATAGTTACCACTTGGGT
CAGGGTAGCGTTCTCTGATTATTTTTACTATACATGCAGGTATAACTTTT
TTATTGCCCTTGCCAAGTTTCCCCCAACGCCACATTATATATTGGCGATA
AGCTGTAGACCTCCAACATGCATTTTGGGCTGCATCAAAGGGGTACATCC
AAAGATCACTGTTGTTCCTCATTGCCACCTCAAGTACACTATCATCTAGG
ATCAGACGATCAAACTCTGGATGCTCGTGATTTCTTTCTGCATTTTTACA
gcataaattttctttctcgGTCGGCATTCTTTCACATAAACCACAATTGC
ACCAACTACATTCTGtttctgaaatttttgatacattttgtCTTTCTGTT
TTAACGCTCGACCATGCACTTGGTGACGCTAAGCTAAGCTTTTTTACCAA
AGTTATCAACTCTTCAACTGACTTGTCTTGACAGTATTCCTAATATATTA
AAAAAGAGCTGGTATATTTCTCTCTTAAAATCTCATTCAAAAAACTTAAC
AATTGTCAGTTTAAAACTGATGATTGCAAAGAAATTTGCATGAGACGGGA
TTTCCCAAGAGAGaaattgaagttattctgacaTGCAGGAATATAATCTA
ACCGAATTCAAGAATTATTTATACCTCACATTCTTTTTCTGCTTTTGCTT
TTCTCTCTTCCTGTAATGTTGCCAAATCTTGTggtgttattttctttttc
tttgtctttcTTCTGTTTTGCTATNTTTTTCTGCTTTTGCTTTTCTCTCT
TCCTGTAATGTTGCCAAATCTTGTggtgttattttctttttctttgtctt
tcTTCTGTTTTGCTATTTAGAATAAATTCATAAGGTATTCGCATAGTATT
TTTTCATATATCTTGAGATTAGACCCcaaaatttgaagctttttaatttt
ctaaGATACTGTTTCAGATTGAACTTTCAGTCATGTTGTAAGGATAATGT
TATAGTTCTTGGTTTATCAGATCCTAGAGGACCCTTTTGAAGGCTGTTAT
GAGTCAAATATCACCAGTCTAAAACTAGAGAAAATTTACCTCAGTAGACT
CTGACAAGTTTTTACATTTTGAGGTTGAACAGCGACATATATCTGGTAGG
CATTTCAGATTTGCATTTGCGCATGGACATCTGATGCAAGCCCCCTTACA
AAAACATAAGATGCGAGACTCGTCATCATTGCCGTCATTATCTTCATTGT
CATCACTATCACCATTTTTTTGTTCCTAAAAATTAAGGtgaaagtttttg
tgacaccttaaaGGAACTTACTTTGGCAGGAACTAATCTTGATGAATTTA
GAGAAAATCTGCTAAATTTAATCTTTTGCTCACTTataaatttttgacaa
attttaaaaatacagCATCCTTGCAAAATAAGTCTTAATTCATGTTTTAC
AAACCGTTTCAGAATTTGATTCATTTTCAGTGATCGGAATGTCAAGTTCC
ACCAAATTCACCGCATCCTGAAAAAGATAAATATTTGggaaataaagttt
tgatttcctGTTACTTTTCACTATAAAAAATTCTATTCAGCAGAAATTAC
ATAATTTCcatctttctttcatttttccacACGATTTTGAAACAATGAGA
TGTATTTCAACAATCCAAATTTTTGACAAATGTGATAACTGATCTGAACT
GATTCTAAAAATGCGGCTTCATACCTCTTCAAGTTGATTTTTGCACTTAT
TTTTTTTGCAGCCACATGATTCGTTGCACTTTTGTTTCTTTGACATGCAC
TCACACTTTCTGATACACATGCCTTTGCATTTACCTGCCACTTTTTTCTC
GGGACTTTTGTCATTCAGGGCACTTTGAATTTCCAAATTCACGTTTTTGT
CAACAAATACCCCAATGCTGTTGTTAAGGGCATCTGCCACCCTATTATAA
AATTCAAACAGGATAAACTGTATAACAAATTCATTTATAATTCACAGATC
AACAACAGTAGATGTACCTCCACCTCAAGTTGGCCAATCCTTTGCCGATG
AACTTAGTGAaagtgatgaagaagaaaacagaaATGGGGAAGATAGTGAA
AACTCTGAAACTGACTagattttgtatatattttagtGGGGGGTATTTGA
TagcaaaaaaattggcacccaagttattttgattctcCTACCCCTAATAG
CTAATAAGCGTTCCAAAAATGTTTCTTCTGTCAGTTGACATAAGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058399-exon-scaffold_310-1491911889:198798..198970 | TCONS_00058399-exon-scaffold_310-1491911889:198798..198970 | Clytia hemisphaerica | exon |
| TCONS_00058399-exon-scaffold_310-1510915933:198798..198970 | TCONS_00058399-exon-scaffold_310-1510915933:198798..198970 | Clytia hemisphaerica | exon |
| TCONS_00058399-exon-scaffold_310-1575043694:198798..198970 | TCONS_00058399-exon-scaffold_310-1575043694:198798..198970 | Clytia hemisphaerica | exon |
| TCONS_00058399-exon-scaffold_310-1491911889:201145..201393 | TCONS_00058399-exon-scaffold_310-1491911889:201145..201393 | Clytia hemisphaerica | exon |
| TCONS_00058399-exon-scaffold_310-1510915933:201145..201393 | TCONS_00058399-exon-scaffold_310-1510915933:201145..201393 | Clytia hemisphaerica | exon |
| TCONS_00058399-exon-scaffold_310-1575043694:201145..201393 | TCONS_00058399-exon-scaffold_310-1575043694:201145..201393 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_310 | supercontig | scaffold_310:198798..201393 + |
Blast
The following BLAST results are available for this feature:
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