TCONS_00058512 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00058512
Unique Name	TCONS_00058512
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	916

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_311:104039..114850-

transcript sequence

>TCONS_00058512 ID=TCONS_00058512|Name=TCONS_00058512|organism=Clytia hemisphaerica|type=transcript|length=916bp
AATCTTTTAAGCGGAAATATATTTTGCTTATGTCAGCAACAAAAATGGTA
TCGTGACTGCGATCCTCAAGTCGGACGAAGGCGgctatattttttcattt
ttgatttgctGCCAAGATTGGAGATCGAAAACCATGGGAAGAAGACGTGC
TAAAAGGAAGCCACCACCCAGAAGAAAGATGGTTGGAACATTGGAAAGTC
AATTCAACTGTCCATTTTGCAATCATGAGCAATCCTGTGATGTAAAAATg
gaCAAAGTTCGAAACGTGGGGCATATTTCGTGTCGCGTATGCTCGGAAGA
TTATCAAACCAATATCACATATCTTTCGGAACCTGTGGATGTTTACAGTG
ATTGGATTGATGCGTGCGAAGAAGCCAACAATTGACATGTTTTGAAGAAT
TTGATTTTATGAGattttatacAAAATGGGAAGCGGAAAGCGAACGTTAT
ACTCGATTACATCACCAAGCTGATCCACTATTTTTATCGTGTATATAATT
TTTTATACGAAGAACTAGAAGAAAATGGCGTCCCTTCCTAATCGATAACC
GGTGCTGAATAATCCGTTTAacatcaaacaaagattttcaagtattttta
ttgtgttttaaagagaaaaagaaCCATTTTCATGTAAATAATAAGTATAA
TACAAGAAAGTGTTTTATCGTTCTATCgaagtttaaaggttttgttttta
aataaaagtgatatcgtttgcttactcatcaattttaatttataagattt
ttcacattggattgacatggatgtggagtaagattggccagaaaggggaa
aaaacaacatttttttgcctatatcagcataatataacaatagggagaca
ctatcctgatatgaaatatgtgtctgatatgaaacgggaacacttatgta
aaaataaaacctttaa

Run BLAST on NCBI

transcript from alignment at scaffold_311:104039..114850-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00058512 ID=TCONS_00058512|Name=TCONS_00058512|organism=Clytia hemisphaerica|type=transcript|length=10812bp|location=Sequence derived from alignment at scaffold_311:104039..114850- (Clytia hemisphaerica)
AATCTTTTAAGCGGAAATATATTTTGCTTATGTCAGCAACAAAAATGGTA
TCGTGACTGCGATCCTCAAGTCGGACGAAGGCGGCTATATTTTTTCATTT
TTGATTTGCTGCCAAGATTGGAGATCGAAAACCATGGGAAGAAGACGTGC
TAAAAGGAAGCCACCACCCAGAAGAAAGATGGTTGGAACATTGGAAAGTC
AATTCAACTGTCCATTTTGCAATCATGAGCAATCCTGTGATGTAAAAATG
TAAGAAGATTTTTTATCGTTTAAATTATCGGCAGCAGGTCCAAAATGCAT
AAAACATAATGCATATTGCATAAGTCATAATGCATAATATTTGAAGAATA
TAAATTTTAGCGGCTATAATAAACAGGGGGGGTCGGTACTAAAATTTCAG
ACATCATCATGACTTTTAGGCTGATGGAAATTAATGATATGTTTACCGTA
ATGACGATTTTCAGAATTCGATGCGGCCAAGTTTTCACTATTCATTATTC
ATTATTTTCCCATAAACATTTATTTTTACCAGATTTTTCGTTTCCTCTTG
TGTCTCCGGAACTCTCGTGTTTTTATTGATTCTTTTGGTTATCCCGTTTG
AACGAGCTTAAAGAGATAAATCTTTTTCTTCCCGCTAGAGAATTATATAA
TGTTAGGGGTCACCCACATATCGATGTTTCCTGCAACTAACGTCATTGTG
ACGCGAGGGTGTGGGGGGGTCAGAGCCTATGACGCTAAGAAATTTCAACA
GAATATCGATTTTCAAACCTGTAACATTTTGTATTCCATCCTTCGCTACA
CCTGCCAGTTAGTCACACTAGCGTCCCGCCAAAATGCGTATCAATGATTA
ATGCTGCGAAAGCGCTATATCGTTTACTTGTTTCTTGTTTAAACTGTTTA
TCGTTTATCGTTTATTTTGTTTCCAACTTTCAAGTTTTAATTAATATTGT
CTTGCAAACTTGATTCAGGTAACTCTCATCCTTGTTGTTGAAATGTATCC
TGTAGATGACTGATGTTGTTTTTTCTGAAAGCTTAATTTCCTAGTGTGAC
TAACTGCCTGCCATCTTAATTCAAACGCATAAAATATAACAGAGATGATA
TCCAATACCCTTTCGTTACGTTTGTAGGATTATGTTATTATCTCCCTAAT
CATAAAAACAGAGATACCGCAATAAAGAATAGATGGGCCGTATTTTGATA
TACAAGGGCCGCGCTGAGGAACTGGGGAGGAACAAAATGTGAAAGTCATT
AAGTCAAAACCACTTGTTTTTAAACCGTGCGAAACGAAGCACAAAAATCA
ATGTGGCTGGAATATCAATATCTGTAATAGAGAAGAAAAATTACTTTCAT
CGATTTTTGGTATATTTATGTAAATGACGCTAAGAAAGGGGGGTGGGGGG
GTTCTTCAGATAGCATCACAATGACGTTAGTTGCAGGAAAAATCGATATG
TGAGTGACCCCTTATCTCCACAATATGACAAAATTAAATTCACACGGTAA
AGACTACTAGAGGGCCGTTCGGGTTGTTAACAATCTAAAAAAGCCACGGG
CCGTTTGTTTTGATATCAACTTCGAAAATTTTTGTTCTCTGCTCAAGTGG
GAAGAAAAATAATGACAACTTTTCGAGAAAATGGCAAATAATGACAACTT
GATGCGGCAGGTTTTTATTCATAACATTAAATTCCATCGGCCTTAGTGAC
GTGGTGGTATTACAAAAAAAGCCTAAAAGCATTTTAGTACCATGTCCAGA
CGGTGTCAATCGAACGAATCGAACGCCGAATCAATCGAACGCAATTGAAC
GCAATCGAATAATTGCAATTCGATTGTCGAACGCAATCGAATCGCAATCG
AATATTACCCAGGATTTGCTGTTCGATTGCTTCGATTACGTTCGATTGTA
TTTGATTACGTTCGATTGATTCAATTGTATTAGATTTTATTCGCTTTGGC
ATGGTACTTAAGCGCTCGGCCGACCACGCTAAAAAGCTCTAACAGAGTGA
TCCAATTTAATTTAATCGCAATCAAACTCATCGAACATAATCGTAATCGA
ACGAAATCGAAGATTAATCCAATGTAATTGACAATCAATCGAACCAATCT
AACCTTACTCAAACGCAATCGAACACAATCAAATCAAATATTACCCAGGA
ATCGGCCGTTCGATTGAGATTCGATTACGTTCGACAATCGAATCGCAATT
ATTCGATCGGGTTCGATTACGTTCGACAATCGAATCGCAATTATTCGATC
GCGTTCGATTACGTTCGATTGGTTCGATTGCGATTTTTGTTTTGTTGTTC
GATTGACACCGTCTGGCCATGTGTACTAAAATCCCAAATTAGGTGGGGTC
TTCAAGAAATTTAAGAAAAAATTTAGTACATGAGTACTAAAAACCACCAA
ATTTTAGCGGTTAGTGTAAAACACAGGTCACAGGTCACAGGTCACGGGTC
ACAGGTCACGGGTCACAGGTCACGGGTCACAGGTCACAGGTCATACAAAT
TACAGACCGGAAAACTGTAACGCACTTGTAACATACAACTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTGTGAAATAGCTATTTTCCTGTTAGGGGCTGTTTAAGGCA
AAGGTGAGATCGATATTCGAATATTTCTTTATTCTTTGTATATAACATTC
GTAACATGCGAACATTGAAAAGATAACTTTTTTGCATGTGTGATATAGAT
GTAATATATAATACAAAGTATTACAGGTCCATGTTATACACGGCATAAAA
CGCGAAATCACGTGGTAAACACGTGGGTAGATTTTTAGCTTTAAAATAGT
TCTAGATCAATAAAATACCTTTGGAATTATATCATTGACATTAACAACTG
TTTTTCAAACATTTTCTTTGTATTTTACAGTAATCAAAGCTGACCTGTCA
ACACTGACCTGTGACCTGTGACCCGTGACCTGTGACCTGTGACCTGCGTT
TTACACCAACCGAAATTTTAGGAAATTTAACTATTGACTGAGCATTTTAG
GCAAAATGAAAAAACAAAAACTCTCTATATAAGATTTAAATATGTCCCTG
TGTCACAAATTAAGCAAAAATTTTGTCCCCAGTGGTAAAATACCCTTGAA
TTTCAGCCCCACTGGGAAATTGACTTTGATTTCATCCCCACTCAAAATTC
CATGTTTAAAAATTGCACTCCAAAACCATATCCCCACTGGGTTTTTAACC
TTGGAACAATAGAATTTCTATCCCCATTAGCATTTCAATAGGAAATTTTA
TCTCAACTGAAGAAAAAGGTTCCTCTGGGGCCGTGAAACACCCATGTTTC
AATTTAATTGTTCTGCTTTTATGTACTATGGAATAAAAAATGTTTTCGAA
GTTGAATGCTTTGTTTTTTGTAAAGAACCGTGGATAACTAGATAGAAAAG
AAATAGCAAGCTGTAAATTAGAGGTAAAAAATAACCAATCAATATTTGCA
ATAACTAAAGTAGAGCAGAGCAAAAGTGTCTTGACTGTTTCTGAGTCTTT
ATCTAGAATAGATAGAGATAGATCAGGTTCATTGACAGCTTAAATAACCA
GAGTTGGCATTTTTTTGAAAGTCCAAAGACCCGCATTCTTTNCAGAATTC
AGTCAAAATATAATCAAAGTGATTGCAGTTCTTCCTGACACTAAAGCTTG
AAAAGTTCCTTCTAAAACTACGAAAATTGATTTTCATGGTGACATGTGAA
ACTTTTGTTGAATCATCAAAAGTATATGTTAGAATAATCTAACTAGACAT
TTTTCTAGCAGCTAGAATGACTGCATGACTAAATCTCCAAAATCCTCTCC
ATCCGAATCCAAATTTATAATAATAGCACCATTTTTAGGGGTGTTCGTAT
TTACCCCTTAATTTTAACTGTCCCGTAATTACCCCAGATGACTATATATA
TATGTAGAAAAAACACGAAAATATTTCCTCTGTATATTACCGTAAGTTGG
TCTAATATCGACATCCCTCGTCTAATTCGACACCCTTCTTTAGAGAAAGG
ATTATTCCTCTCTGACTNCCCCCCCCCCCCCCCCTGTAATAAAGTGAATT
TGAAAGATAATACTTTCAACAAAACAAATATACCATTTTCTACCAGAAAA
TAAAGGGTACCATTTTCTACCAGAAAATAAAGGGTAGAAAGCTTTAAATT
TGAATTTTGGATGATGAAGAAAATCCATGATCCACTGAAAATGCTTGTCT
CCATTTTGATTTTCATAGTTGTATTTTACAGAACGTAGTCTAGTCATCTG
GGGTAATTACGGGACGATTTTGACATATTTGAGCATTACTCTAAAAGTAT
TAATCCTAGAGATCCGATTTTTTGATATTTCATTTATCAGAGTATGACCT
TTACACAAGATTTATTACTTTTCCTTGAATATAAGTAGATGCTCCTAAAA
ATTATTCTAAAGNGAAAAACAGTTTCAACCTTTCTATAAATTTCAGCTGA
TAAAAAGGGTGTCAGAATTAGAGGAGGGGTGTCGACATTAGACCAAGTTA
CGGTACTTTTCTAAAACTAGAAAACGTAAATTTTATAGCAAGATCTTTAT
TCTTGGTTTTCTCAGCAGAGACAGAGATCTTTTCGAACAATTGCTAATAA
ATTTCAACGGGTTTTCCTTCTTACAAAGCATTACCGTAAGGGGTCACTCA
CATATCGATTCTTCCCACGACTAACGTCAAATTGAAGCTAATTTGAAAAC
CACTTAATGTCAAAGTTTAAAAATTATCAAAAATCGATGAAACTCTAAAT
TTTCGCATTCACTTTCATCGTCGCTTCGTCAGCCATCTTTAATTTTGCTA
CGGCTTGCTCAGTTTACATTTAAAAAGTAACAGAGATAATTTCAAAACTT
CTTTCGGAAAGTTGCCTCCGTTATCTCCGTAATCATAATCAACAGAATAG
CGGCATTTTACAAAAAAAGACCGAGCATCGGCAAAATTCAAGGGCCGTGC
GGACAGTCTAAACAAAAGGAACTCGAGACATAAACATCAGGCTGTTTGTT
TTGATTAGAATTGCTCTATAAAATAGCGAACTGAACGAATAAAAAAGGAG
GAAAAGAAATATGGAAAGTAACATTTGTCATGGAATGAAAGTCTCAAAAA
TCGATATATCTGGTGAAATTTCTTAGCGTCACAGACTCTAACCCCCCACC
CCTTAGCGTCAATTTGACGTTAGTCGTGGGAAAAATCTATATGTGAGTGA
CCCCTAACTTGGTCTAATATCGACATCCCTCCTCTAATTTCGACACCCTT
TTTATCAGCTGAAATTGATAGAAAGGTTGAAACTGTTTTTCTTGGCTTAG
TGGTCACAGAGGGTCTGGGAATTAGACGAGGGATGTCGATATTAGAATGC
TTTTGTGAATGCTTTTTGTTAGATAAGCCAATATCTATCTATATATTTCA
TACTAAAAGGTCCTAGGACCCATTATCCGTACATTTGTTTGCTTAAGAAA
ATGAAATATGAATAAATAAATAAATGAAATGTTAAGAGCAATAAAATATT
TTAAAATTTTAATTAATGCTTGATAAGGAGAAAAGAATGAATATCCAGCC
AATATAAATTAAAGAGCTTCATCACAGATGTTTGCCGCAAGCAAAAGTTG
GTAATGCAAAGTTTCACAAAATCGCATTTAGCAGACACAAAAAAAAACTC
CATAATGGCGGCATAATGTGAGAGAGCAATCAGAATACAAAATAAACAAA
TTTCAAAGGCTCATTGTAAGTGATTGAGTGAAGCTATCATCAAAAAATAA
AAATAAAACAAACCTTTAAACTTTTCAATAATCCAAATAAACAAAATATT
TCAAATGAATTGATGTTAAGTTTGAAAACAAGCACCATTTCCATCGTACA
CTTTTAGAGCAAAAAGCAGCATTTCGCTGAAATCTGCTGCTCTTTCCGGG
AAAATAATTTCTCAGAATGTCAGAGAGTCTGGTGCTGAATATATAGTTTA
GTGGGTCAAGCTTGTTTTAGTTCTCTATCTTTAGATAAAGCCTGAAAACC
TCTTCTGAAACGGGGGTATAAACGATCTTTGTCTATTTTGAAGTCGTACA
ATCTTTTACTTTTTAAAACCACTTAGATTCAGTTTTTGAGTATAATAACA
AAGATATTTAACCAAAATTTGTTTCATTAAAGCTCTTTTCTTTCAGCGAA
ATAAGCCTTTAGTCAAAAGTCGCAAAGTTTCCCAGGTGTTGGGCCGGTAA
ATCAGGTCTTGGGCAGCTAAATCAGGGCCTGGGCCGCTTACAGAAAAAAA
TTTGCGGTGGCGGTGGTATGGCTGAGTTTCTGGNAAATTTTCGCATTCAC
TTTCATCGTCGCTTCGTCAGCCATCTTTAATTTTGCTACGGCTTGCTCAG
TTTACATTTTAAAAATAATGGAGATAATTTCAAAACTTCTTTCGGAAAGT
TGCCTCCGTTATCTCCGTAATCATAATCAACAGAATAGCGGCATTTTACA
AAAAAAGACCGACCAACGGCAAAATTCAAGGGCCGCGCGGATAGTCTAAA
CAAAAGGAACTCGAGACATAAACATTGGGCTGTTTGTTTTGATTAAAATT
GCTCTATGAAATAGCGAACCGAACGAATAAAAAAGGAGGAAAAGAAATAT
GGAAAGTAACATTTGTCATGGAATGAAAGTCTCAAAAATCTATATTTGAC
TAAATAAGCCTTTAGTCAAAAGTCGCAAAGTTTCCCAGGTGTTGGGCCGG
TAAATCAGGTCTTGGGCAGCTAAATCAGGGCTTGGGCCGCTTACAGAATA
AAATTTGCGGTGGCGGTGGTATGGCTGAGTTTCTGGTCAAAAAAGAGCGC
TACGTACATGTTTTTCTTTTTCATTGCATTTATATAAGCATATCTAGGCT
AAATATTGCACAAATTTAAGCATAGGCTAAGCATTGCCTTGAGCTTACAA
AAAATGTGTTTTCCTGAACCAAGCACTGTTTTTTGCTGGGATTGTTTAGG
ATTATGGGAATTTCCCTAAAGTTTCAGCTTGGGATATAAGCATCCTTATA
AGCATTTTTCAGCCTTGTCAAGTCCTCAACCTAAGCCTCTCTGAGCCTGT
TTTCGAATTTTTGTAAGCTTATTAAAAAAACATGTAACGGACCTCTCCGG
CTCTGGAATGCCATAAATTGGTCTAAAAACTGGCTTCACAAATATTTCAA
ACGTCATTCCAACGAAACCATGGGGTGTTTTACCAATTTTTTTTATTAAA
ACGCGATAAAAAAGCAGGTTTTGTCTAACAGGGCTACAAGTGCCTATGAT
TGATATAAATGAAACAATTCACGTATTTTTCCAGGGTGTGAATTTTTAGC
TTTCCTCCCTTTTCTTCATGTTTGCCAGGGAGTTTTCATTCATAGAGACT
CATGAGACTCATGAGACCGACTAACTCAACATTGATTTTTGCAAATCCCC
AAGATTNAGACTCATGAGACCGACTAACTCAATATTGATTTTTGCTCATC
CCCAAGATTGGCGAACTATCGTTTTTGCTAATTTACAGCTTTTCTTGATC
TTTAATTGCTTTCTTTTGTCGATTGCTTGCGTCATCAACGACTCGCGAGT
CGAATAAGAAATATTTGCAGTTAGAGCCCATGAAAGTCACCACATTTTTA
TGAGAGTAATGACAGGAGTCATATCCTCAAGTGCAGATAGAGTTTTCACT
GTAGCTGGAACAACCGTTACTTTTGCATGGCGGACAATGCATAACATTTT
TTTTTTTTGCTGATAGTTGCCCAGGAAGTTTTTGTACAAAATTATTCATA
TCTTTTTTAACGCACACTGAAGAGATATTTTTGTTATGAATGATGTTTCT
TGTTTTGAGGGAGAATATATTTCTTGATGTAATTTGAAAGACCATCGTAT
TTTGTATTTATTTTCATTTTATTTTATTTTCAGGGACAAAGTTCGAAACG
TGGGGCATATTTCGTGTCGCGTATGCTCGGAAGATTATCAAACCAATATC
ACATGTATCCTTTTCTTCTTTAAAAAGAGTACCTTTTCCTCTCAGTGAAG
TATCTAAATAGGTTTTCCCGTCTCAAAATTCTGCACAATTCACCTTGATT
TGAAAACTGTTTAAAAAGAGCATATTTTAGAAAATAACTGAAAAGAATAG
AAAATACTCTTTCTGAGGCATTCTTGACATTTCTTTCCAAATTGTGTCGG
GCAATTTTTCATGCCCTTTTATTTCCAATTACCAGAAGCTGCCCTATTCT
GAAATCACTAAAATGTTGGTAAAAATAGCCTTTTCAGTCGAAAAATACTA
AAAAAGTACCTTTTTTGGCTAGCAATAGCCGTTGCCCTGCCTTTCTAAAA
TATGACCTATACGTATAGTGAAACATTTCCCAGGCAAGTACAAATATATC
GTAATTGATCGAGTTTTCAATTGGAGTTATTGCTTACTAGCCATATGTCT
TTTAATGAAATAATGACAAGTGTCGATGAAAAATGAAAATTATACTCTGT
TTCAACTGAACTGAACTGTACCCACCGACCTTTATATAACTCTGGACCAA
GTTTTTCAATCCTGGCCAAGAAAAATCTTTGATCAGAGTTTTTTTTTTAA
AGTGGTATCCTAATAGTAGCATTACTCAATAGCGGTGAAAATGCATCGAG
AGCGCTAGATCTACTTTTCCTGGAATACTTTTGATGACGTAGCACCGTTA
GACGTCAATAGCTTGGTCCAGGGATATATGAAGGTCAGTGAAAGTACCCC
ACCACATGTTAGTTTCCTTGACTACCATTTGTTTGGTTATCAAAAGATCT
TTCGGAACCTGTGGATGTTTACAGTGATTGGATTGATGCGTGCGAAGAAG
CCAACAATTGACATGTTTTGAAGAATTTGATTTTATGAGGTACACAATTC
TTATAGTTAGATAGTCATTAATTATAAAAAACCCTGGTCTGGCAATGTAT
TGTTTTAACTTTTTGTTCAATTTTCTTTTGTTACTAACAAAAAACAAGTT
GCGATTTGCATACTTTTTGATCACGTTACCAAAATCTCCTCTTGGGATTG
GTCCATTTTCTAATCAAGTGATTAAAAAGTTTGCAAATCGATTTTGGGAC
GTAAGCTCCATCTTTTAACAATAAAAAGAGAGAAAAGCCTTTCAGGCCAG
TGTTTTTATAATGACTATGATAGAATGAGCTCAAAAAAGGCCCTGATCTC
GAAATAAATCATACGTGGCTGGGGTTTGACACAGGTTCCTTTTGGGTCCA
AGAACTACCAAAAAAAACAAGCAGTCAATTTGAAAAGTTTTGTACCCTTT
TGGGGACATTTTATGATGACGTCTATTTTCAATACAAACCCCTTCAAACA
AGATTTTCAAAAAGTTTTGAAAAATAAGTTTTCTATCTGAAAGATCCTGA
GAAATAGCTAGATAACAAAAAAGTTGTTATTTTTTTAATTTTTGTTTATT
AGACCCCCTACTGTATTCATGATATGCACCACTGGAGAGCCTTCTGAGAA
CTTTTAAAATTTTCCACCCAATACGTCACTTTTTCTATTGTTTAAGTGAC
GTATTGGGTGGAAGATTTCAGAAGTTCTCAGAAGGCTCTCCAGTGATCTC
CAGTGATGCATATCATGAATTGCAATGTCTTCCACGGACCCAATAGCTGA
TTGGTTGAAAGTGACGTATTGACTGATTTTACGTCACTTACAGCCAATCA
GCTATTGGGTCTGATGTAATGTCAGAAGACATTGCAGCGATGCATATCAT
GAATACTTGCCCTTTGACGTAAATTATTAACACTGTACTGGCTTCTTTGT
GAGTATCACTTCCCAGGTACTTTTCACAATTATATTTTGTAATTCTTCAA
AACAAGCTTTGAAATTCTTTAGAGACATTTTTATCATAACACTGTTTATT
ATTTTTCAGATTTTATACAAAATGGGAAGCGGAAAGCGAACGTTATACTC
GATTACATCACCAAGCTGATCCACTATTTTTATCGTGTATATAATTTTTT
ATACGAAGAACTAGAAGAAAATGGCGTCCCTTCCTAATCGATAACCGGTG
CTGAATAATCCGTTTAACATCAAACAAAGATTTTCAAGTATTTTTATTGT
GTTTTAAAGAGAAAAAGAACCATTTTCATGTAAATAATAAGTATAATACA
AGAAAGTGTTTTATCGTTCTATCGAAGTTTAAAGGTTTTGTTTTTAAATA
AAAGTGATATCGTTTGCTTACTCATCAATTTTAATTTATAAGATTTTTCA
CATTGGATTGACATGGATGTGGAGTAAGATTGGCCAGAAAGGGGAAAAAA
CAACATTTTTTTGCCTATATCAGCATAATATAACAATAGGGAGACACTAT
CCTGATATGAAATATGTGTCTGATATGAAACGGGAACACTTATGTAAAAA
TAAAACCTTTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_036863	XLOC_036863	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00058512-exon-scaffold_311-1575043694:114602..114850	TCONS_00058512-exon-scaffold_311-1575043694:114602..114850	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1575043694:106447..106517	TCONS_00058512-exon-scaffold_311-1575043694:106447..106517	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1575043694:105562..105654	TCONS_00058512-exon-scaffold_311-1575043694:105562..105654	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1575043694:104039..104541	TCONS_00058512-exon-scaffold_311-1575043694:104039..104541	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1510915933:114602..114850	TCONS_00058512-exon-scaffold_311-1510915933:114602..114850	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1510915933:106447..106517	TCONS_00058512-exon-scaffold_311-1510915933:106447..106517	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1510915933:105562..105654	TCONS_00058512-exon-scaffold_311-1510915933:105562..105654	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1510915933:104039..104541	TCONS_00058512-exon-scaffold_311-1510915933:104039..104541	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1491911889:114602..114850	TCONS_00058512-exon-scaffold_311-1491911889:114602..114850	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1491911889:106447..106517	TCONS_00058512-exon-scaffold_311-1491911889:106447..106517	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1491911889:105562..105654	TCONS_00058512-exon-scaffold_311-1491911889:105562..105654	Clytia hemisphaerica	exon
TCONS_00058512-exon-scaffold_311-1491911889:104039..104541	TCONS_00058512-exon-scaffold_311-1491911889:104039..104541	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_311	supercontig	scaffold_311:104039..114850 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
70.901	66.5627	182.842	210.89	117.954	94.9837	73.3052	75.1375	63.4835	53.6278	49.2632	45.9849	30.1497	39.4336	37.0091	36.1875	59.769	61.4341	17.6767	21.5954	46.5918	43.1076	65.066	49.8728	37.0094	42.2779	42.4862	30.5715	42.5277	39.7627

Blast

[Close]

BLAST of TCONS_00058512 vs. Swiss-Prot (Human)
Match: ELOF1 (Transcription elongation factor 1 homolog OS=Homo sapiens GN=ELOF1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.968e-32
Identity = 53/68 (77.94%), Postives = 58/68 (85.29%), Query Frame = 2

Query:  179 MVGTLESQFNCPFCNHEQSCDVKMDKVRNVGHISCRVCSEDYQTNITYLSEPVDVYSDWIDACEEANN 382
            M GTLE+QF CPFCNHE+SCDVKMD+ RN G ISC VC E++QT ITYLSEPVDVYSDWIDACE AN 
Sbjct:   16 MTGTLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACEAANQ 83

The following BLAST results are available for this feature:

BLAST of TCONS_00058512 vs. Swiss-Prot (Human)

BLAST of TCONS_00058512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ELOF1	1.968e-32	77.94	Transcription elongation factor 1 homolog OS=Homo ...	[more]

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TCONS_00058512 (transcript) - C. hemisphaerica