|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058633 ID=TCONS_00058633|Name=TCONS_00058633|organism=Clytia hemisphaerica|type=transcript|length=972bp
GTGTTCTTCAGAAAAAATAAACTAATCATTCTACACTATTGCGGTAGAAA
AAGTAGATATCTTTTAATAGCTCAAACAAGTACAGGGGGACTCAAAATGG
TGGAGGATACAcgttaggcgtacaaactttcgcgagcagaaactttcgcg
aggacgaaaaatcacgaaattcacgacatttacttgcgcgaatttaacga
aaatttattttcgcgagcataaactatcgcgaatcaagacataatattga
gaattttcacatgaaaaaatggcttaaagggacaaatacttcttgtaTTG
GCtagaaacatttgtcctttgacttattagtcttttagcaggctaaaaag
tgccataaaagctacattttattcaaagtttgaagttttatagAGTTTCT
ATTTCTGTCAAGAATaaaagcataaactttcgcgaatggccatTCTAGAA
ttcttaaagacatttactttcgcgaaaatcgcgaaagtttctgctcagaa
taaaaacatactggtttaaaatatttcgctctctcttagagcatcttcaa
ttttttttgaataacaaagaCGTTTAACAATTATATTTAACGACGCTAGA
ACGGCATTACAATGACTTCTTCAGTTTTTGACGTCACGGAACATCTGGTA
CACTTCTTTCGCGTATCCGTGTCACAAAAGACTTCCTTGTGAAACTAGCT
GATCTTCCATCGCTTCCTTCGAACACCATACTCGTTACAATGGATGTTGC
TTCACTGTACACCAACATCGATCACGAAGAAGGAGCAAAGGCCTGCTTTG
ATCATCTGGAACAACGCAACAAGAAATCGATCAGCTCATCTTATCTAAAA
AAGCTGATACTTCTGGTATTACGGTCAAACGTATTCCGATTTGGGAGCAA
CATCTACCACCAAATCAAAGGAACCGCGATGGGTACTCCAATGGCTCCAA
ACTACGCAAACCTCTTCATGGC Run BLAST on NCBI transcript from alignment at scaffold_311:1147071..1148042 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058633 ID=TCONS_00058633|Name=TCONS_00058633|organism=Clytia hemisphaerica|type=transcript|length=972bp|location=Sequence derived from alignment at scaffold_311:1147071..1148042 (Clytia hemisphaerica)
GCCATGAAGAGGTTTGCGTAGTTTGGAGCCATTGGAGTACCCATCGCGGT
TCCTTTGATTTGGTGGTAGATGTTGCTCCCAAATCGGAATACGTTTGACC
GTAATACCAGAAGTATCAGCTTTTTTAGATAAGATGAGCTGATCGATTTC
TTGTTGCGTTGTTCCAGATGATCAAAGCAGGCCTTTGCTCCTTCTTCGTG
ATCGATGTTGGTGTACAGTGAAGCAACATCCATTGTAACGAGTATGGTGT
TCGAAGGAAGCGATGGAAGATCAGCTAGTTTCACAAGGAAGTCTTTTGTG
ACACGGATACGCGAAAGAAGTGTACCAGATGTTCCGTGACGTCAAAAACT
GAAGAAGTCATTGTAATGCCGTTCTAGCGTCGTTAAATATAATTGTTAAA
CGtctttgttattcaaaaaaaattgaagatgctctaagagagagcgaaat
attttaaaccagtatgtttttattctgagcagaaactttcgcgattttcg
cgaaagtaaatgtctttaagaaTTCTAGAatggccattcgcgaaagttta
tgcttttATTCTTGACAGAAATAGAAACTctataaaacttcaaactttga
ataaaatgtagcttttatggcactttttagcctgctaaaagactaataag
tcaaaggacaaatgtttctaGCCAAtacaagaagtatttgtccctttaag
ccattttttcatgtgaaaattctcaatattatgtcttgattcgcgatagt
ttatgctcgcgaaaataaattttcgttaaattcgcgcaagtaaatgtcgt
gaatttcgtgatttttcgtcctcgcgaaagtttctgctcgcgaaagtttg
tacgcctaacgTGTATCCTCCACCATTTTGAGTCCCCCTGTACTTGTTTG
AGCTATTAAAAGATATCTACTTTTTCTACCGCAATAGTGTAGAATGATTA
GTTTATTTTTTCTGAAGAACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058633-exon-scaffold_311-1491911889:1147071..1148042 | TCONS_00058633-exon-scaffold_311-1491911889:1147071..1148042 | Clytia hemisphaerica | exon |
| TCONS_00058633-exon-scaffold_311-1510915933:1147071..1148042 | TCONS_00058633-exon-scaffold_311-1510915933:1147071..1148042 | Clytia hemisphaerica | exon |
| TCONS_00058633-exon-scaffold_311-1575043694:1147071..1148042 | TCONS_00058633-exon-scaffold_311-1575043694:1147071..1148042 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:1147071..1148042 . |
Blast
The following BLAST results are available for this feature:
|
