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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059161 ID=TCONS_00059161|Name=TCONS_00059161|organism=Clytia hemisphaerica|type=transcript|length=1830bp
ACTTAATCTTCCTTATAACCCTACTTAggttgaatatattttttctctcg
GTTTATTTACATCAATTGACAAATTTGTGTTGTAAAACTTGGCGACTTTC
TTATAACTAGGAaaccttttctttatttttcgtcaCTCGATGATATATCA
GACCATCATTAAGCCATATCACGCCATAGCAcaacaaaaatatagaaaac
tcaAGGACAGGAGCTGAACTAGAGAAACTTTTTATAATCTTAACGTTAAT
CTGTGTTAACCTACCTAAATTCTCTATGTCATTTTGAGAACTTGAGTTTc
cttttttggtaaaaacttCCTGTATGTTTTGATATAAGTTCATCAAGACT
TGATTCTGATAATTGTTTTAGTCTTTCTGAAGCGTCTTTGAGATCGATAG
GAGGCGTTGTAAAATAAATTTGTAAGCTCCGTTTCAGTTTTTCATTCTAT
CTAACGACCGTAAAAGAAGTTGTGGAGAAATGATAAAAACTGGACTGTTT
TGGTTGCTGACTGCAACATTTGCGACCGCTTTTTATGATGAAAAGCAATT
TGCTGATTTACGTAAACAGTATGGTTGGGTGGATATCCCAGAAGTCAACA
TGAAGATCGATGAAATGATTCGATATCATGGATATCCAGTTGAAATGCAT
AATGTTATAACTGAAGACCACTACGTACTGAGCGTTCAACGTATACCTTC
TAGTCCCAACTACAAAGGACCAATCAAAAGCGTTCCTGTTTTTCTTCAAC
ATGGTTTGTTAGATTCTGCTACCACATGGGTGATCAATGGACCTAAAAAA
AGTTTAGCATACGTTTTAGCTGATCAAGGTTATGATGTTTGGCTTGGTAA
CAGTCGTGGAAACTTCTATTCAATGACAAACACTAAGATACCAAATACTG
ACTCCAAGTTTTGGGATTTCACttttgaagagATGGCAAAATATGATGTA
CCAGCTTGTATCAATTACATCCAAAGAATGTCAAACGCAAGTAAAATAAA
CTACGTTGGACACTCTCAAGGTACAACAATGGCATTCATTGAATTCAGCA
GGAACCAAGATCTagcaaagaaaatcaacaaaatggtAGCCTTAGCTCCA
GTTGCTACAGTTAATAACATCCTTGGAGCTTTTAAATATTTCGCAAAAGC
AAAAACTCCTTTGAAAtatCTTTTCAAATTAATGGGTGTCAAACAGTTTT
TGCCTACATCTTTCCTCACCAAGTATCTTGCTAAAATGATTTGTGCTAAA
GAATATCTGAACAATATTTGTGCtggtttcattttcattatggCGGGATT
TGATACTAGTAATATGAACACTACAAGATTACCTGCTTACATCGCACACA
CTCCAGCTGGAGCATCAGTCAAAGATATGTTTCATTTTGCTCAGAATGTT
GGAAAACCTGGATTACGTAAATACGATTATGGTTATTTCAGTAACTATTT
CAAATATGGCCAGtttTCAGCACCAGAATATGACTTTAAACCATTCAATG
TTCGTTTGGCAATCTTCACTGGTGGTAATGATTGGCTTGCACAACCTCAG
GATGTCAGTCAAAGCGTTCGTGGTCAAATTAAAAGCATTGTTTATGATGA
AGATTTCCCAGAAATGAACCATTTAGATTTTGTGTGGGGAGTTGACGCTG
CTACATTGATTTATAACAAAATTGTTAAGATATTTGACTACTGATAAAAT
CACCAccatttgttttctttttttcattgtaCACACGAATTCTAGAgcca
aaaagcaaaaaaatcaatcaTCTAAAAAGATGATTTCAGTTGcagttttc
tttcctttcaaacTCATTCATAGTTTTAGC Run BLAST on NCBI protein sequence of TCONS_00059161-protein >TCONS_00059161-protein ID=TCONS_00059161-protein|Name=TCONS_00059161-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
MIKTGLFWLLTATFATAFYDEKQFADLRKQYGWVDIPEVNMKIDEMIRYH
GYPVEMHNVITEDHYVLSVQRIPSSPNYKGPIKSVPVFLQHGLLDSATTW
VINGPKKSLAYVLADQGYDVWLGNSRGNFYSMTNTKIPNTDSKFWDFTFE
EMAKYDVPACINYIQRMSNASKINYVGHSQGTTMAFIEFSRNQDLAKKIN
KMVALAPVATVNNILGAFKYFAKAKTPLKYLFKLMGVKQFLPTSFLTKYL
AKMICAKEYLNNICAGFIFIMAGFDTSNMNTTRLPAYIAHTPAGASVKDM
FHFAQNVGKPGLRKYDYGYFSNYFKYGQFSAPEYDFKPFNVRLAIFTGGN
DWLAQPQDVSQSVRGQIKSIVYDEDFPEMNHLDFVWGVDAATLIYNKIVK
IFDY Run BLAST on NCBI transcript from alignment at scaffold_319:43809..48535+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059161 ID=TCONS_00059161|Name=TCONS_00059161|organism=Clytia hemisphaerica|type=transcript|length=4727bp|location=Sequence derived from alignment at scaffold_319:43809..48535+ (Clytia hemisphaerica)
ACTTAATCTTCCTTATAACCCTACTTAggttgaatatattttttctctcg
GTTTATTTACATCAATTGACAAATTTGTGTTGTAAAACTTGGCGACTTTC
TTATAACTAGGAaaccttttctttatttttcgtcaCTCGATGATATATCA
GACCATCATTAAGCCATATCACGCCATAGCAcaacaaaaatatagaaaac
tcaAGGACAGGAGCTGAACTAGAGAAACTTTTTATAATCTTAACGTTAAT
CTGTGTTAACCTACCTAAATTCTCTATGTCATTTTGAGAACTTGAGTTTc
cttttttggtaaaaacttCCTGTATGTTTTGATATAAGTTCATCAAGACT
TGATTCTGATAATTGTTTTAGTCTTTCTGAAGCGTCTTTGAGATCGATAG
GAGGCGTTGTAAAATAAATTTGTAAGCTCCGTTTCAGTTTTTCATTCTAT
CTAACGACCGTAAAAGAAGTTGTGGAGAAATGATAAAAACTGGACTGTTT
TGGTTGCTGACTGCAACATTTGCGACCGCTTTTTATGATGAAAAGCAATT
TGCTGATTTACGTAAACAGTATGGTTGGGTGGATATCCCAGAAGTCAACA
TGAAGATCGTAAGTCAATTGAAAGAAATTCTATTATTAAAAATATACCCC
GAAACTTCCAATTCTTTTGATGCTTTGTGACTCTCTAAATGATTGTTGTC
GAATAAACTTAGGCTCTGAACGTATCTCTCCCTCCGTTTAtatcaaaagt
ttttcaatctTTACACCCCTGTACCCGACCTGTACCAACCCATTCGCTTG
CCGGAAACTCGAGTTTGCTGTGTTTGGAGATCGACTTAGCCCGGAAAAAC
CCATAAATAACTCGCAAAGTCAACCACTACCGGTTTATTAATACAACAAA
CAGTATTTTTCCCACTTTTCGTTCTTTCCACCatacaatcctaaaaactt
ttgtttttcaaatcttcTATAGGATGAAATGATTCGATATCATGGATATC
CAGTTGAAATGCATAATGTTATAACTGAAGACCACTACGTACTGAGCGTT
CAACGTATACCTTCTAGTCCCAACTACAAAGGACCAATCAAAAGCGTTCC
TGTTTTTCTTCAACATGGTTTGTTAGATTCTGCTACCACATGGGTGATCA
ATGGACCTAAAAAAAGTTTAGCATACGTTTTAGCTGATCAAGGGTAAGAT
CTCTAGCTTGTACCCAGCCCCTTGGTTTTCAATTTTGCATCATATTGATA
GCAGTTTATCCCATCCACCTATCAAAATAGATGAACTTGCTTTAGGGCAC
AAGACAGACTTATCAaactgttttgatttttaagtaGCTTTATTTAGGTG
AATTCTGTGAAACGTGTTTGACAGGGAAAATTTAAAGTTTCGGGCTCACC
TTTAAAATCCAAGATGACCTATCCCAAAACTTTGCATTGGTGACCATTCA
TACTTTTGGACGATTTCAGGTAAAATGTCTTCTTTATGATTGCGCTTTTT
TTTGCAGTTATGATGTTTGGCTTGGTAACAGTCGTGGAAACTTCTATTCA
ATGACAAACACTAAGATACCAAATACTGACTCCAAGTTTTGGGATTTCAC
GTAAGAATTGTCAAGATTCGATATTATATCGGCCAAGGCAAACCAGTCCA
ATCATCCAATGCATTATTTCCCAGCGTTGAATGAACTTGGATAACATTGT
AATATACAATATTGTAACATTCAAAACATTTTCgaacatccctgtctcag
taaaTTTTTTTCGTCGATTCAAATGAAATGAAGAGCTGAAAGTCTAGCAC
cttgatttttttcactttttgctcTACGTCACAAAATCTGGTCTGAATCA
AAGACGTCTGCAAAACTGCTTGCTGCAATACTTTAGAGAGTTTCTCTTAA
CTTTGGACAATTTTCTAGAGTGAGAGGTTCTTGATTCTTGTTTGTGGTTT
AGATtcgagatgccttggagttttttacaagatacctcactaattggtca
tttaaagtgatagagatgacgcattctttagaaaaagtaataagattctt
ttattacatcttaacgaccaaccaaatcaaataagagcttgtaaaaactt
cagcTTGTCCCTTAGATTCAAAAAGAAATCTCCTGAAATTCATAGGTTAC
TAAAAGCTTCCTTGATCTGTGTGTTTTggatttttagttttgaagagATG
GCAAAATATGATGTACCAGCTTGTATCAATTACATCCAAAGAATGTCAAA
CGCAAGTAAAATAAACTACGTTGGACACTCTCAAGGTATGCCATATCAAT
CGACACACTTACAGTAGCGTGGCTGTGACAGGGGACAGAGGGCAACTATC
TCCCTAAGCAGCTGATTTTTTTGGGGGAGTCGAAAGACTAGGGGtgaaaa
aagtgcaaaaatttgacactaGTCGTTCTTTATTTCTGAGACAGAAATTC
GAGTTTTAAGTAGCTGGTCCGGCCATTAAAAAGTTACCAGGATCCCTCAC
ATTTGATTTAAATCCTCTGTCCAATTTCAAACTGTAACAGCGTGTGATCC
CATCCCACAAAAGATGCTTTACTAAAGTGATTACAGCATTGTCATCTATT
TATCAATTCTAGGTACAACAATGGCATTCATTGAATTCAGCAGGAACCAA
GATCTagcaaagaaaatcaacaaaatggtAGCCTTAGCTCCAGTTGCTAC
AGTTAATAACATCCTTGGAGCTTTTAAATATTTCGCAAAAGCAAAAACTC
CTTTGAAAGTAAGCAAATTGATCTTTTTCATGTAAGAATTTAATTAGTAA
AACTGCATTCAAATCGAAGAGCCATCCAATCTTTGTTTAAAAGAGGCCCT
AAAATATATTTATCGCGACCACAAGTAAAGATCAAAATCTGTTGCTTTGC
AAAAATTTTTCGTTTTGATGCATTTGAATAATTTTCATGAATAAGACAAT
AGTAAAACTTTTTTCGTCGATGTCTTGGCGGGCGAGGTGTGCGCCTTTAG
GTCAATAATCAAGTGCATGTCTTTATCCCAATGCGAACCATAGCATATGT
GGTTATTAAGTCGAAAGCAATTGGGTAGGCGTTTAGTCCCTGCTAAAGAG
TTTGATGAATTATGAATCAATcatatctttttcttttcagtatCTTTTCA
AATTAATGGGTGTCAAACAGTTTTTGCCTACATCTTTCCTCACCAAGTAT
CTTGCTAAAATGATTTGTGCTAAAGAATATCTGAACAATATTTGTGCtgg
tttcattttcattatggCGGGATTTGATACTAGTAATATGAACACTACAA
GATTACCTGCTTACATCGCACACACTCCAGCTGGAGCATCAGTCAAAGAT
ATGTTTCATTTTGCTCAGGtaattttcatcttcaaatatataattttcag
tGAAATAGAAAAATCTAGTCTTTCATCTCCATTACAATGAACTACACTAA
GCTCGCATCCCAATGAAAAAGACTGTAAGCGTATTCAAGAATTTCCTTAA
TCACAAAGCATATTATTCCCGACCACATTAGATAGGGGGGCCCTAGATAG
CATTCTAATTCAAGCCCCTTAATTTTAGTTAAAAACAATCACCATGTTCA
CTGCGgacattgggatttcaatactacaaaatacaaaataattcttttta
atttctttttcatgataTCTTTAGAATGTTGGAAAACCTGGATTACGTAA
ATACGATTATGGTTATTTCAGTAACTATTTCAAATATGGCCAGGTAAGAA
TCTTTTTAATTGGAGTGAAATTCACTCATCGCTTTCTTTCATTCATAAAA
CTTGCTAAAGCTGAAAGATTAAGAGATGGGTTTTTCTACGAGGATTCTCA
AATCCAAAATATAGATAGAGTTCTCCTCCTCCCCCGTCCATCCACTGACC
TGACTAATACCAGCACACTATTAAACCCGTGCAATCACACTCTAAGCCAG
TCGAAGTCTTGCAAACTCGAGCCTAGTCCTTTATCCCCTCGCTTCAAAAA
AtggtgcaagtggctctgggtacatGATTATAGTCAAGGTAGACAAAAAC
TTTTATCTCTCTCGCATTGAAAACATTGAACATTCAGTCTTAAATtgtat
taaagtctgtctcaaaataatttgcagctgaagACAAAAATGGcagtaac
ttttgatagaattcgaattaagtTGTGATTTtatgctcgttaaaaagata
ttcgtgagtggaatattatcaagtaaaaaaattggaaaaaaaaatgaaaa
tgaaaatgaaaaatgaattattattttgagacagactttagaatCTAAAA
TTCACGGAATGGGAAATCTCAAAGGATAaattaaacaaagatttaaatct
ttcattttagtttTCAGCACCAGAATATGACTTTAAACCATTCAATGTTC
GTTTGGCAATCTTCACTGGTGGTAATGATTGGCTTGCACAACCTCAGGAT
GTCAGTCAAAGCGTTCGTGGTCAAATTAAAAGCATTGTTTATGATGAAGA
TTTCCCAGAAATGAACCATTTAGATTTTGTGTGGGGAGTTGACGCTGCTA
CATTGATTTATAACAAAATTGTTAAGATATTTGACTACTGATAAAATCAC
CAccatttgttttctttttttcattgtaCACACGAATTCTAGAgccaaaa
agcaaaaaaatcaatcaTCTAAAAAGATGATTTCAGTTGcagttttcttt
cctttcaaacTCATTCATAGTTTTAGC Coding sequence (CDS) from alignment at scaffold_319:43809..48535+ >TCONS_00059161 ID=TCONS_00059161|Name=TCONS_00059161|organism=Clytia hemisphaerica|type=CDS|length=9720bp|location=Sequence derived from alignment at scaffold_319:43809..48535+ (Clytia hemisphaerica)
ATGATAAAAACTGGACTGTTTTGGTTGCTGACTGCAACATTTGCGACCGC
TTTTTATGATGAAAAGCAATTTGCTGATTTACGTAAACAGTATGGTTGGG
TGGATATCCCAGAAGTCAACATGAAGATCGATGAAATGATTCGATATCAT
GGATATCCAGTTGAAATGCATAATGTTATAACTGAAGACCACTACGTACT
GAGCGTTCAACGTATACCTTCTAGTCCCAACTACAAAGGACCAATCAAAA
GCGTTCCTGTTTTTCTTCAACATGGTTTGTTAGATTCTGCTACCACATGG
GTGATCAATGGACCTAAAAAAAGTTTAGCATACGTTTTAGCTGATCAAGG
TTATGATGTTTGGCTTGGTAACAGTCGTGGAAACTTCTATTCAATGACAA
ACACTAAGATACCAAATACTGACTCCAAGTTTTGGGATTTCACttttgaa
gagATGGCAAAATATGATGTACCAGCTTGTATCAATTACATCCAAAGAAT
GTCAAACGCAAGTAAAATAAACTACGTTGGACACTCTCAAGGTACAACAA
TGGCATTCATTGAATTCAGCAGGAACCAAGATCTagcaaagaaaatcaac
aaaatggtAGCCTTAGCTCCAGTTGCTACAGTTAATAACATCCTTGGAGC
TTTTAAATATTTCGCAAAAGCAAAAACTCCTTTGAAAtatCTTTTCAAAT
TAATGGGTGTCAAACAGTTTTTGCCTACATCTTTCCTCACCAAGTATCTT
GCTAAAATGATTTGTGCTAAAGAATATCTGAACAATATTTGTGCtggttt
cattttcattatggCGGGATTTGATACTAGTAATATGAACACTACAAGAT
TACCTGCTTACATCGCACACACTCCAGCTGGAGCATCAGTCAAAGATATG
TTTCATTTTGCTCAGAATGTTGGAAAACCTGGATTACGTAAATACGATTA
TGGTTATTTCAGTAACTATTTCAAATATGGCCAGtttTCAGCACCAGAAT
ATGACTTTAAACCATTCAATGTTCGTTTGGCAATCTTCACTGGTGGTAAT
GATTGGCTTGCACAACCTCAGGATGTCAGTCAAAGCGTTCGTGGTCAAAT
TAAAAGCATTGTTTATGATGAAGATTTCCCAGAAATGAACCATTTAGATT
TTGTGTGGGGAGTTGACGCTGCTACATTGATTTATAACAAAATTGTTAAG
ATATTTGACTACTGAATGATAAAAACTGGACTGTTTTGGTTGCTGACTGC
AACATTTGCGACCGCTTTTTATGATGAAAAGCAATTTGCTGATTTACGTA
AACAGTATGGTTGGGTGGATATCCCAGAAGTCAACATGAAGATCGATGAA
ATGATTCGATATCATGGATATCCAGTTGAAATGCATAATGTTATAACTGA
AGACCACTACGTACTGAGCGTTCAACGTATACCTTCTAGTCCCAACTACA
AAGGACCAATCAAAAGCGTTCCTGTTTTTCTTCAACATGGTTTGTTAGAT
TCTGCTACCACATGGGTGATCAATGGACCTAAAAAAAGTTTAGCATACGT
TTTAGCTGATCAAGGTTATGATGTTTGGCTTGGTAACAGTCGTGGAAACT
TCTATTCAATGACAAACACTAAGATACCAAATACTGACTCCAAGTTTTGG
GATTTCACttttgaagagATGGCAAAATATGATGTACCAGCTTGTATCAA
TTACATCCAAAGAATGTCAAACGCAAGTAAAATAAACTACGTTGGACACT
CTCAAGGTACAACAATGGCATTCATTGAATTCAGCAGGAACCAAGATCTa
gcaaagaaaatcaacaaaatggtAGCCTTAGCTCCAGTTGCTACAGTTAA
TAACATCCTTGGAGCTTTTAAATATTTCGCAAAAGCAAAAACTCCTTTGA
AAtatCTTTTCAAATTAATGGGTGTCAAACAGTTTTTGCCTACATCTTTC
CTCACCAAGTATCTTGCTAAAATGATTTGTGCTAAAGAATATCTGAACAA
TATTTGTGCtggtttcattttcattatggCGGGATTTGATACTAGTAATA
TGAACACTACAAGATTACCTGCTTACATCGCACACACTCCAGCTGGAGCA
TCAGTCAAAGATATGTTTCATTTTGCTCAGAATGTTGGAAAACCTGGATT
ACGTAAATACGATTATGGTTATTTCAGTAACTATTTCAAATATGGCCAGt
ttTCAGCACCAGAATATGACTTTAAACCATTCAATGTTCGTTTGGCAATC
TTCACTGGTGGTAATGATTGGCTTGCACAACCTCAGGATGTCAGTCAAAG
CGTTCGTGGTCAAATTAAAAGCATTGTTTATGATGAAGATTTCCCAGAAA
TGAACCATTTAGATTTTGTGTGGGGAGTTGACGCTGCTACATTGATTTAT
AACAAAATTGTTAAGATATTTGACTACTGAATGATAAAAACTGGACTGTT
TTGGTTGCTGACTGCAACATTTGCGACCGCTTTTTATGATGAAAAGCAAT
TTGCTGATTTACGTAAACAGTATGGTTGGGTGGATATCCCAGAAGTCAAC
ATGAAGATCGATGAAATGATTCGATATCATGGATATCCAGTTGAAATGCA
TAATGTTATAACTGAAGACCACTACGTACTGAGCGTTCAACGTATACCTT
CTAGTCCCAACTACAAAGGACCAATCAAAAGCGTTCCTGTTTTTCTTCAA
CATGGTTTGTTAGATTCTGCTACCACATGGGTGATCAATGGACCTAAAAA
AAGTTTAGCATACGTTTTAGCTGATCAAGGTTATGATGTTTGGCTTGGTA
ACAGTCGTGGAAACTTCTATTCAATGACAAACACTAAGATACCAAATACT
GACTCCAAGTTTTGGGATTTCACttttgaagagATGGCAAAATATGATGT
ACCAGCTTGTATCAATTACATCCAAAGAATGTCAAACGCAAGTAAAATAA
ACTACGTTGGACACTCTCAAGGTACAACAATGGCATTCATTGAATTCAGC
AGGAACCAAGATCTagcaaagaaaatcaacaaaatggtAGCCTTAGCTCC
AGTTGCTACAGTTAATAACATCCTTGGAGCTTTTAAATATTTCGCAAAAG
CAAAAACTCCTTTGAAAtatCTTTTCAAATTAATGGGTGTCAAACAGTTT
TTGCCTACATCTTTCCTCACCAAGTATCTTGCTAAAATGATTTGTGCTAA
AGAATATCTGAACAATATTTGTGCtggtttcattttcattatggCGGGAT
TTGATACTAGTAATATGAACACTACAAGATTACCTGCTTACATCGCACAC
ACTCCAGCTGGAGCATCAGTCAAAGATATGTTTCATTTTGCTCAGAATGT
TGGAAAACCTGGATTACGTAAATACGATTATGGTTATTTCAGTAACTATT
TCAAATATGGCCAGtttTCAGCACCAGAATATGACTTTAAACCATTCAAT
GTTCGTTTGGCAATCTTCACTGGTGGTAATGATTGGCTTGCACAACCTCA
GGATGTCAGTCAAAGCGTTCGTGGTCAAATTAAAAGCATTGTTTATGATG
AAGATTTCCCAGAAATGAACCATTTAGATTTTGTGTGGGGAGTTGACGCT
GCTACATTGATTTATAACAAAATTGTTAAGATATTTGACTACTGAATGAT
AAAAACTGGACTGTTTTGGTTGCTGACTGCAACATTTGCGACCGCTTTTT
ATGATGAAAAGCAATTTGCTGATTTACGTAAACAGTATGGTTGGGTGGAT
ATCCCAGAAGTCAACATGAAGATCGATGAAATGATTCGATATCATGGATA
TCCAGTTGAAATGCATAATGTTATAACTGAAGACCACTACGTACTGAGCG
TTCAACGTATACCTTCTAGTCCCAACTACAAAGGACCAATCAAAAGCGTT
CCTGTTTTTCTTCAACATGGTTTGTTAGATTCTGCTACCACATGGGTGAT
CAATGGACCTAAAAAAAGTTTAGCATACGTTTTAGCTGATCAAGGTTATG
ATGTTTGGCTTGGTAACAGTCGTGGAAACTTCTATTCAATGACAAACACT
AAGATACCAAATACTGACTCCAAGTTTTGGGATTTCACttttgaagagAT
GGCAAAATATGATGTACCAGCTTGTATCAATTACATCCAAAGAATGTCAA
ACGCAAGTAAAATAAACTACGTTGGACACTCTCAAGGTACAACAATGGCA
TTCATTGAATTCAGCAGGAACCAAGATCTagcaaagaaaatcaacaaaat
ggtAGCCTTAGCTCCAGTTGCTACAGTTAATAACATCCTTGGAGCTTTTA
AATATTTCGCAAAAGCAAAAACTCCTTTGAAAtatCTTTTCAAATTAATG
GGTGTCAAACAGTTTTTGCCTACATCTTTCCTCACCAAGTATCTTGCTAA
AATGATTTGTGCTAAAGAATATCTGAACAATATTTGTGCtggtttcattt
tcattatggCGGGATTTGATACTAGTAATATGAACACTACAAGATTACCT
GCTTACATCGCACACACTCCAGCTGGAGCATCAGTCAAAGATATGTTTCA
TTTTGCTCAGAATGTTGGAAAACCTGGATTACGTAAATACGATTATGGTT
ATTTCAGTAACTATTTCAAATATGGCCAGtttTCAGCACCAGAATATGAC
TTTAAACCATTCAATGTTCGTTTGGCAATCTTCACTGGTGGTAATGATTG
GCTTGCACAACCTCAGGATGTCAGTCAAAGCGTTCGTGGTCAAATTAAAA
GCATTGTTTATGATGAAGATTTCCCAGAAATGAACCATTTAGATTTTGTG
TGGGGAGTTGACGCTGCTACATTGATTTATAACAAAATTGTTAAGATATT
TGACTACTGAATGATAAAAACTGGACTGTTTTGGTTGCTGACTGCAACAT
TTGCGACCGCTTTTTATGATGAAAAGCAATTTGCTGATTTACGTAAACAG
TATGGTTGGGTGGATATCCCAGAAGTCAACATGAAGATCGATGAAATGAT
TCGATATCATGGATATCCAGTTGAAATGCATAATGTTATAACTGAAGACC
ACTACGTACTGAGCGTTCAACGTATACCTTCTAGTCCCAACTACAAAGGA
CCAATCAAAAGCGTTCCTGTTTTTCTTCAACATGGTTTGTTAGATTCTGC
TACCACATGGGTGATCAATGGACCTAAAAAAAGTTTAGCATACGTTTTAG
CTGATCAAGGTTATGATGTTTGGCTTGGTAACAGTCGTGGAAACTTCTAT
TCAATGACAAACACTAAGATACCAAATACTGACTCCAAGTTTTGGGATTT
CACttttgaagagATGGCAAAATATGATGTACCAGCTTGTATCAATTACA
TCCAAAGAATGTCAAACGCAAGTAAAATAAACTACGTTGGACACTCTCAA
GGTACAACAATGGCATTCATTGAATTCAGCAGGAACCAAGATCTagcaaa
gaaaatcaacaaaatggtAGCCTTAGCTCCAGTTGCTACAGTTAATAACA
TCCTTGGAGCTTTTAAATATTTCGCAAAAGCAAAAACTCCTTTGAAAtat
CTTTTCAAATTAATGGGTGTCAAACAGTTTTTGCCTACATCTTTCCTCAC
CAAGTATCTTGCTAAAATGATTTGTGCTAAAGAATATCTGAACAATATTT
GTGCtggtttcattttcattatggCGGGATTTGATACTAGTAATATGAAC
ACTACAAGATTACCTGCTTACATCGCACACACTCCAGCTGGAGCATCAGT
CAAAGATATGTTTCATTTTGCTCAGAATGTTGGAAAACCTGGATTACGTA
AATACGATTATGGTTATTTCAGTAACTATTTCAAATATGGCCAGtttTCA
GCACCAGAATATGACTTTAAACCATTCAATGTTCGTTTGGCAATCTTCAC
TGGTGGTAATGATTGGCTTGCACAACCTCAGGATGTCAGTCAAAGCGTTC
GTGGTCAAATTAAAAGCATTGTTTATGATGAAGATTTCCCAGAAATGAAC
CATTTAGATTTTGTGTGGGGAGTTGACGCTGCTACATTGATTTATAACAA
AATTGTTAAGATATTTGACTACTGAATGATAAAAACTGGACTGTTTTGGT
TGCTGACTGCAACATTTGCGACCGCTTTTTATGATGAAAAGCAATTTGCT
GATTTACGTAAACAGTATGGTTGGGTGGATATCCCAGAAGTCAACATGAA
GATCGATGAAATGATTCGATATCATGGATATCCAGTTGAAATGCATAATG
TTATAACTGAAGACCACTACGTACTGAGCGTTCAACGTATACCTTCTAGT
CCCAACTACAAAGGACCAATCAAAAGCGTTCCTGTTTTTCTTCAACATGG
TTTGTTAGATTCTGCTACCACATGGGTGATCAATGGACCTAAAAAAAGTT
TAGCATACGTTTTAGCTGATCAAGGTTATGATGTTTGGCTTGGTAACAGT
CGTGGAAACTTCTATTCAATGACAAACACTAAGATACCAAATACTGACTC
CAAGTTTTGGGATTTCACttttgaagagATGGCAAAATATGATGTACCAG
CTTGTATCAATTACATCCAAAGAATGTCAAACGCAAGTAAAATAAACTAC
GTTGGACACTCTCAAGGTACAACAATGGCATTCATTGAATTCAGCAGGAA
CCAAGATCTagcaaagaaaatcaacaaaatggtAGCCTTAGCTCCAGTTG
CTACAGTTAATAACATCCTTGGAGCTTTTAAATATTTCGCAAAAGCAAAA
ACTCCTTTGAAAtatCTTTTCAAATTAATGGGTGTCAAACAGTTTTTGCC
TACATCTTTCCTCACCAAGTATCTTGCTAAAATGATTTGTGCTAAAGAAT
ATCTGAACAATATTTGTGCtggtttcattttcattatggCGGGATTTGAT
ACTAGTAATATGAACACTACAAGATTACCTGCTTACATCGCACACACTCC
AGCTGGAGCATCAGTCAAAGATATGTTTCATTTTGCTCAGAATGTTGGAA
AACCTGGATTACGTAAATACGATTATGGTTATTTCAGTAACTATTTCAAA
TATGGCCAGtttTCAGCACCAGAATATGACTTTAAACCATTCAATGTTCG
TTTGGCAATCTTCACTGGTGGTAATGATTGGCTTGCACAACCTCAGGATG
TCAGTCAAAGCGTTCGTGGTCAAATTAAAAGCATTGTTTATGATGAAGAT
TTCCCAGAAATGAACCATTTAGATTTTGTGTGGGGAGTTGACGCTGCTAC
ATTGATTTATAACAAAATTGTTAAGATATTTGACTACTGAATGATAAAAA
CTGGACTGTTTTGGTTGCTGACTGCAACATTTGCGACCGCTTTTTATGAT
GAAAAGCAATTTGCTGATTTACGTAAACAGTATGGTTGGGTGGATATCCC
AGAAGTCAACATGAAGATCGATGAAATGATTCGATATCATGGATATCCAG
TTGAAATGCATAATGTTATAACTGAAGACCACTACGTACTGAGCGTTCAA
CGTATACCTTCTAGTCCCAACTACAAAGGACCAATCAAAAGCGTTCCTGT
TTTTCTTCAACATGGTTTGTTAGATTCTGCTACCACATGGGTGATCAATG
GACCTAAAAAAAGTTTAGCATACGTTTTAGCTGATCAAGGTTATGATGTT
TGGCTTGGTAACAGTCGTGGAAACTTCTATTCAATGACAAACACTAAGAT
ACCAAATACTGACTCCAAGTTTTGGGATTTCACttttgaagagATGGCAA
AATATGATGTACCAGCTTGTATCAATTACATCCAAAGAATGTCAAACGCA
AGTAAAATAAACTACGTTGGACACTCTCAAGGTACAACAATGGCATTCAT
TGAATTCAGCAGGAACCAAGATCTagcaaagaaaatcaacaaaatggtAG
CCTTAGCTCCAGTTGCTACAGTTAATAACATCCTTGGAGCTTTTAAATAT
TTCGCAAAAGCAAAAACTCCTTTGAAAtatCTTTTCAAATTAATGGGTGT
CAAACAGTTTTTGCCTACATCTTTCCTCACCAAGTATCTTGCTAAAATGA
TTTGTGCTAAAGAATATCTGAACAATATTTGTGCtggtttcattttcatt
atggCGGGATTTGATACTAGTAATATGAACACTACAAGATTACCTGCTTA
CATCGCACACACTCCAGCTGGAGCATCAGTCAAAGATATGTTTCATTTTG
CTCAGAATGTTGGAAAACCTGGATTACGTAAATACGATTATGGTTATTTC
AGTAACTATTTCAAATATGGCCAGtttTCAGCACCAGAATATGACTTTAA
ACCATTCAATGTTCGTTTGGCAATCTTCACTGGTGGTAATGATTGGCTTG
CACAACCTCAGGATGTCAGTCAAAGCGTTCGTGGTCAAATTAAAAGCATT
GTTTATGATGAAGATTTCCCAGAAATGAACCATTTAGATTTTGTGTGGGG
AGTTGACGCTGCTACATTGATTTATAACAAAATTGTTAAGATATTTGACT
ACTGAATGATAAAAACTGGACTGTTTTGGTTGCTGACTGCAACATTTGCG
ACCGCTTTTTATGATGAAAAGCAATTTGCTGATTTACGTAAACAGTATGG
TTGGGTGGATATCCCAGAAGTCAACATGAAGATCGATGAAATGATTCGAT
ATCATGGATATCCAGTTGAAATGCATAATGTTATAACTGAAGACCACTAC
GTACTGAGCGTTCAACGTATACCTTCTAGTCCCAACTACAAAGGACCAAT
CAAAAGCGTTCCTGTTTTTCTTCAACATGGTTTGTTAGATTCTGCTACCA
CATGGGTGATCAATGGACCTAAAAAAAGTTTAGCATACGTTTTAGCTGAT
CAAGGTTATGATGTTTGGCTTGGTAACAGTCGTGGAAACTTCTATTCAAT
GACAAACACTAAGATACCAAATACTGACTCCAAGTTTTGGGATTTCACtt
ttgaagagATGGCAAAATATGATGTACCAGCTTGTATCAATTACATCCAA
AGAATGTCAAACGCAAGTAAAATAAACTACGTTGGACACTCTCAAGGTAC
AACAATGGCATTCATTGAATTCAGCAGGAACCAAGATCTagcaaagaaaa
tcaacaaaatggtAGCCTTAGCTCCAGTTGCTACAGTTAATAACATCCTT
GGAGCTTTTAAATATTTCGCAAAAGCAAAAACTCCTTTGAAAtatCTTTT
CAAATTAATGGGTGTCAAACAGTTTTTGCCTACATCTTTCCTCACCAAGT
ATCTTGCTAAAATGATTTGTGCTAAAGAATATCTGAACAATATTTGTGCt
ggtttcattttcattatggCGGGATTTGATACTAGTAATATGAACACTAC
AAGATTACCTGCTTACATCGCACACACTCCAGCTGGAGCATCAGTCAAAG
ATATGTTTCATTTTGCTCAGAATGTTGGAAAACCTGGATTACGTAAATAC
GATTATGGTTATTTCAGTAACTATTTCAAATATGGCCAGtttTCAGCACC
AGAATATGACTTTAAACCATTCAATGTTCGTTTGGCAATCTTCACTGGTG
GTAATGATTGGCTTGCACAACCTCAGGATGTCAGTCAAAGCGTTCGTGGT
CAAATTAAAAGCATTGTTTATGATGAAGATTTCCCAGAAATGAACCATTT
AGATTTTGTGTGGGGAGTTGACGCTGCTACATTGATTTATAACAAAATTG
TTAAGATATTTGACTACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059161-exon-scaffold_319-1491911889:43809..44416 | TCONS_00059161-exon-scaffold_319-1491911889:43809..44416 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:43809..44416 | TCONS_00059161-exon-scaffold_319-1510915933:43809..44416 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:43809..44416 | TCONS_00059161-exon-scaffold_319-1575043694:43809..44416 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1491911889:44781..45001 | TCONS_00059161-exon-scaffold_319-1491911889:44781..45001 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:44781..45001 | TCONS_00059161-exon-scaffold_319-1510915933:44781..45001 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:44781..45001 | TCONS_00059161-exon-scaffold_319-1575043694:44781..45001 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1491911889:45316..45408 | TCONS_00059161-exon-scaffold_319-1491911889:45316..45408 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:45316..45408 | TCONS_00059161-exon-scaffold_319-1510915933:45316..45408 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:45316..45408 | TCONS_00059161-exon-scaffold_319-1575043694:45316..45408 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1491911889:45996..46093 | TCONS_00059161-exon-scaffold_319-1491911889:45996..46093 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:45996..46093 | TCONS_00059161-exon-scaffold_319-1510915933:45996..46093 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:45996..46093 | TCONS_00059161-exon-scaffold_319-1575043694:45996..46093 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1491911889:46421..46566 | TCONS_00059161-exon-scaffold_319-1491911889:46421..46566 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:46421..46566 | TCONS_00059161-exon-scaffold_319-1510915933:46421..46566 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:46421..46566 | TCONS_00059161-exon-scaffold_319-1575043694:46421..46566 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1491911889:46949..47176 | TCONS_00059161-exon-scaffold_319-1491911889:46949..47176 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:46949..47176 | TCONS_00059161-exon-scaffold_319-1510915933:46949..47176 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:46949..47176 | TCONS_00059161-exon-scaffold_319-1575043694:46949..47176 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1491911889:47483..47551 | TCONS_00059161-exon-scaffold_319-1491911889:47483..47551 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:47483..47551 | TCONS_00059161-exon-scaffold_319-1510915933:47483..47551 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:47483..47551 | TCONS_00059161-exon-scaffold_319-1575043694:47483..47551 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1491911889:48169..48535 | TCONS_00059161-exon-scaffold_319-1491911889:48169..48535 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1510915933:48169..48535 | TCONS_00059161-exon-scaffold_319-1510915933:48169..48535 | Clytia hemisphaerica | exon |
| TCONS_00059161-exon-scaffold_319-1575043694:48169..48535 | TCONS_00059161-exon-scaffold_319-1575043694:48169..48535 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_319 | supercontig | scaffold_319:43809..48535 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016788 | hydrolase activity, acting on ester bonds |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006629 |
lipid metabolic process |
| molecular_function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
Blast
BLAST of TCONS_00059161 vs. Swiss-Prot (Human)
Match: LIPG (Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 8.997e-105 Identity = 171/372 (45.97%), Postives = 231/372 (62.10%), Query Frame = 3
Query: 588 PEVNMKIDEMIRYHGYPVEMHNVITEDHYVLSVQRIPSSPNYKGPIKSVPV-FLQHGLLDSATTWVINGPKKSLAYVLADQGYDVWLGNSRGNFYSMTNTKIPNTDSKFWDFTFEEMAKYDVPACINYIQRMSNASKINYVGHSQGTTMAFIEFSRNQDLAKKINKMVALAPVATVNNILGAFKYFAKAKTPLKY----LFKLM-GVKQFLPTSFLTKYLAKMICAKEYLNNICAGFIFIMAGFDTSNMNTTRLPAYIAHTPAGASVKDMFHFAQNVGKPGLRKYDYGY-FSNYFKYGQFSAPEYDFKPFNVRLAIFTGGNDWLAQPQDVSQSVRGQIKSIVYDEDFPEMNHLDFVWGVDAATLIYNKIVKI 1682
PEV M I +MI Y GYP E + V+TED Y+L V RIP G PV FLQHGLL SAT W+ N P SLA++LAD GYDVWLGNSRGN ++ N +FW F+F+EMAKYD+PA I++I + + +++YVGHSQGTT+ FI FS N LAK+I ALAPVATV KY L++ LFK + G K F P +F ++LA +C++E LN +C+ +FI+ GFD+ N NT+RL Y++H PAG SV++MFH+ Q V + YD+G N Y Q P Y+ NV +A++ GG D LA PQDV + ++ +++Y ++ P NHLDF+W +DA +YN IV +
Sbjct: 29 PEVTMNISQMITYWGYPNEEYEVVTEDGYILEVNRIPYGKKNSGNTGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGTTIGFIAFSTNPSLAKRIKTFYALAPVATV-------KYTKSLINKLRFVPQSLFKFIFGDKIFYPHNFFDQFLATEVCSREMLNLLCSNALFIICGFDSKNFNTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAMNVPIAVWNGGKDLLADPQDVGL-LLPKLPNLIYHKEIPFYNHLDFIWAMDAPQEVYNDIVSM 392
The following BLAST results are available for this feature:
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