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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059269 ID=TCONS_00059269|Name=TCONS_00059269|organism=Clytia hemisphaerica|type=transcript|length=1047bp
TGTTTATTCATTCCAGTTGAATCTCTCCTATCACAGTgggcaaaatttac
aaattccTGTCCGTAAAATATATTAACAGTATAAaatttaaaatatctgt
atatatttacaattttttaacAGGCAGAAATTTTAGGCAGCTCTACGTCT
CTGAGGTTTTAAGGGGCAATCACAAAAATCTTTGTAGGGCATTATCACCC
GACTGACCCAAAAAATAATTCCTCCTTGTTCATCAGTcactttctaaaaa
caaaaatcaatcaGAAGCAATTTGCATTGAACGCCATCAACAAAACAACT
GTCATGCTTAGAAAGGCCTAACAACAtcacatttttcaaagatttttgct
gTTTCTGCTCTAGAAAGATTACAATTTTTGTTGTGTGTTGAAATTTTTTG
GGAATTTAGGGAATTTAGACAAGATTTAACAAGATTAGTTCTCTTCAAAA
CTAAATTAAATGTTTTCCTTACTCACCAAAATAACTTTGGttcaaaatta
gattttttgatattttgcctAACTAACAAATGAAATTCatgaaaattgct
tgaaaaaggGCAAAATAGAGCAGATTTACACTCATTAACtaatttgtcaa
aattaaatCTCCATTCGCCATATAAGTgatgaatagacctttttggaATT
GCAGCAACTATCTGCTTTTGTATGCAAAAATGTGGAGCACAAATTTGCAG
TGGTGAAATTCCTTttaaaaaagtatgcaaaatctaaGCAACTTTTAAGA
AGAAATAAGATGTTAATGACTAGTTTATTTGCATGGAAATGGCTTAATAC
AAAAGAAGATAGCTTTAAATGactaaaaaaaagtgtaaattcTTCCATCT
GATTGCACaattaacaattcaatttcaccTATATAACGGATTGGAAAAAT
GCTTAATGCTAGAAAGTGTACATTCTAATTGTGTTATCTATTGTTACTGG
TATATAAGTAGATAAAATGTAAACAACGGCAAAATTATATTTCCTATCCC
TCACTAGTATAGAAATGGAGGTTGCATACAATTTATGACATCAATTA Run BLAST on NCBI transcript from alignment at scaffold_321:192..1238 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059269 ID=TCONS_00059269|Name=TCONS_00059269|organism=Clytia hemisphaerica|type=transcript|length=1047bp|location=Sequence derived from alignment at scaffold_321:192..1238 (Clytia hemisphaerica)
TAATTGATGTCATAAATTGTATGCAACCTCCATTTCTATACTAGTGAGGG
ATAGGAAATATAATTTTGCCGTTGTTTACATTTTATCTACTTATATACCA
GTAACAATAGATAACACAATTAGAATGTACACTTTCTAGCATTAAGCATT
TTTCCAATCCGTTATATAggtgaaattgaattgttaattGTGCAATCAGA
TGGAAgaatttacacttttttttagtCATTTAAAGCTATCTTCTTTTGTA
TTAAGCCATTTCCATGCAAATAAACTAGTCATTAACATCTTATTTCTTCT
TAAAAGTTGCttagattttgcatacttttttaaAAGGAATTTCACCACTG
CAAATTTGTGCTCCACATTTTTGCATACAAAAGCAGATAGTTGCTGCAAT
tccaaaaaggtctattcatcACTTATATGGCGAATGGAGatttaattttg
acaaattaGTTAATGAGTGTAAATCTGCTCTATTTTGCcctttttcaagc
aattttcatGAATTTCATTTGTTAGTTaggcaaaatatcaaaaaatctaa
ttttgaaCCAAAGTTATTTTGGTGAGTAAGGAAAACATTTAATTTAGTTT
TGAAGAGAACTAATCTTGTTAAATCTTGTCTAAATTCCCTAAATTCCCAA
AAAATTTCAACACACAACAAAAATTGTAATCTTTCTAGAGCAGAAAcagc
aaaaatctttgaaaaatgtgaTGTTGTTAGGCCTTTCTAAGCATGACAGT
TGTTTTGTTGATGGCGTTCAATGCAAATTGCTTCtgattgatttttgttt
ttagaaagtgACTGATGAACAAGGAGGAATTATTTTTTGGGTCAGTCGGG
TGATAATGCCCTACAAAGATTTTTGTGATTGCCCCTTAAAACCTCAGAGA
CGTAGAGCTGCCTAAAATTTCTGCCTgttaaaaaattgtaaatatataca
gatattttaaattTTATACTGTTAATATATTTTACGGACAggaatttgta
aattttgcccACTGTGATAGGAGAGATTCAACTGGAATGAATAAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059269-exon-scaffold_321-1491911889:192..1238 | TCONS_00059269-exon-scaffold_321-1491911889:192..1238 | Clytia hemisphaerica | exon |
| TCONS_00059269-exon-scaffold_321-1510915933:192..1238 | TCONS_00059269-exon-scaffold_321-1510915933:192..1238 | Clytia hemisphaerica | exon |
| TCONS_00059269-exon-scaffold_321-1575043694:192..1238 | TCONS_00059269-exon-scaffold_321-1575043694:192..1238 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_321 | supercontig | scaffold_321:192..1238 . |
Blast
The following BLAST results are available for this feature:
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