TCONS_00059340 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059340
Unique NameTCONS_00059340
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3288

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059340 ID=TCONS_00059340|Name=TCONS_00059340|organism=Clytia hemisphaerica|type=transcript|length=3288bp
GGATTACGTGACTAAATTTGTTCAGAATTCGTTTtactttatttgatttg
attgacgCGATAATGAGCTCCGAAAATAAATGTTTCCCGAAGTCTTTTTC
TTTCTCCAAGAGTAAAAAGGACGAATGGACGAAATATGATGAGCGTTTGA
TCGATGCCGCATACAAATCTGATCGTGAAAGAATCAAGGAAACCATTCGA
AAAAAGGGTGCATCGCCAGTCAAAGTCAGTCGTGATGGGCAAACAGCACT
TCATATATCAGTCAAGAAAGGCATGCTGGATTGTGTTGAATTCATGCTTG
CTGAAAATCCTGATTTATCAACTATCGATCTGCAAGGGCGAACTGTGTAC
CATATAGCTGCAAGCAAGGGTGACCCTGTCATGTTGAAAAAGCTTTTAGA
TTATAGCCGGTGGTGCCTAGAGGTCAAGGATACAAAAGAAATGACAGCAT
TACATTATGCAGTGGCGAGTGGAGAAAATGAGTGTGTGAAACTGCTGATC
AATAATAATAGCCCAGTTGATTTAAGAGATGGTGAAGGGCGTACGCCCCT
TTTGACCGCCATCATGAACGGCTATGAGAAAATAGCAATGACTCTTGTTC
TACACGGTGTTGATGTTAACGCCCCTGATTATAAAGAAAGAACACCGATA
TTTATGGCTTGTATCCAAGGCATGCGAGATGTTGTGGCACTCCTCATTTC
AAAAGGTGCTGACTCAAAACTTGTCGATGCAGAAGGAAAAACATTGGAGC
AGATAGCTGGTGAAGCTGGGCACGTGGAAATTGTTGATATTTTACGGAAC
AGTGCTGATTCTGGAATCATGGATATTGAACACATGCATGAAAACGATGa
aaacgaagaagaagaagaattacATGAAAACGGAGACGTGGATGAGACGG
ATCATGATATCCAAGAAGAACAATCAACAGAAATGAACGACAAAGAAAAC
AAACGACATAGTAGTACCAGCTCATCTTCAgcacaaaattatattttaga
agTCAAGCCTACACTGAGGTCACCGACGGATCGTGTACGAACAGACAGTG
CAAATAGGCGTTCCATTCTGAAGAACGATGACTCTAGTTTAACGACGTCA
ATTATCGAATCGTTAATGGGTTACGATATCGGAAATGAAACAATCAACGA
AAGCACCATCGCTGAAACgcaagaaaaatATGAACAGGAGAAATACGAAA
TGCAACAAGCAATCTCCGAACGTGATAAAAAAATCGAAGAATTGGAACAA
GAGATTTcaaatatcaagaaaaaattacgtTGGGAAACTGATATGCGCTT
CCAAGCAGAAAAAGAAGTTCTGGGACTGAAAAGCCAACTCGAAAATATCG
ATatTCAACACTCAATCAGttcagaaaaagaagaaactcaaACACAAGTA
AAAGAAGAGGAACCTAAAGAAACGGAAATCGGAAACGAAGAGACGGCGGA
AACGGAAAAAACGGAACAATCAAAAGAGGAAACATCACAGGAAATGAAAG
AGCAGTGCTCTGAAAATGAAGAGGAGACAGGAGAAGGTGAATCACAAAAA
GAAGTTGAAACGAAAAAAGAAGAAACAGTACAAGATCATATCAACTTTTT
GGAAGATCACATATTAGGGTTAGAAGATGACATCGAAAAAAGAGACATTC
AAATTACTAACTTGCAAGGAAAACTAGAGAATGCTCAAGAGTTGGTGGAC
CTCAACAATAACACGACCGTTTCCCTCGAAGTATTTAACAAATATAAAGC
GGAGAAAAAGACAGAGAGGACACAATATCGCgaacaaatcaaaattttag
aatCACAATTATCTGAAATTCAAGCCTCTTTGAATAAAGCTAAATCGGAA
AAAGAATATTTGGAAGATCAGATGAGCTCTGAAGCTGATGAGAAAAATAA
CTTAATAAACACGATGAGAGATGAATCAcataaattacagaccagaatga
cAGAATTCGAAGAGCAATACACGAAAGATATTTCATGTTACAGAGAAAAT
ATATTGTCTCTTTATCAGaATAAAATGGATGAAAATCTGGATAACATTCT
gaagaaaattgttttgctgAGAAAGCAGGAATCATGAGATTCGTTGATGA
GGCTGAGATCTAAGAATCATAACAAATTTTTGAACGGATTTTTGGCTAGT
CTGGATGGCACTATTGAATCTAAGATCGGATAGATAGATGGGATTTCGTG
ACCATGATAAATAAGTTATATTTCTGACTGACGATCCCGAACATGGTTGA
ACTAAGGAGTTAGTAATATTCTAAGGTGTAGCTCTATTTTTACCCCTCAA
ggcaaactcgaacccagtcctttAGTAGTtcgctttttatgattttgatg
gcACTTACGAAAGGGATATCGACTGTATCGCATCcatcaataaaatttaa
aaagcgaTGTAatgcaccttttcgaccgtgTTCGCGTGGTCAGGTGCGTG
CCACTTAACTTTTTatttatccccctaaactcaatgcaattcttttttga
cacctttttcaattgtctataggtgcgaaaaaagactgaaacggttttag
ggtggtaaaacggacaaattAATGCCCGCGCGGccattggcggctacggt
caaaaAAGCGTattggctctgggtacgagatttcCCTTAAGGATTAATAT
TTTAACATAGTTGGACTAAAATACATCAGAATACCTTTTATATTTGTTTC
CGTATGGGTAGTAACTGCTTGAGATTTAAACCTTCTCATTATGGTTTAGA
TGAGAGACAATTAATAGAATTTTCTACCACACTCCACCCAAAATCAATTT
CTACAAACATTTAAGATTTGTATATAATACTGTTTTgatattaaatattt
ttaagataTAATAGATTAAGCCTTCAGCAATACttggtcaaatttttagg
gGATAACTAATGTCGAGGAAAGGCATGTCATATGATATACTAAGACAATG
AacgaagagattttttttgattttatttatttattacgTGATACAGTATA
TATTAATATTCCAATATTAGAGAAAGCTTAAAAAACAAGAAATCATTCGC
CCAGATAACGTGATTCTGATTCATCGCgttgaaaaaatctaataaaaatg
gaatgATGGGTTTAAATCTAACTTTggttatattttttcactttttggga
ataaaatgtaataaataaattttgtaccaaatatttttataccaattttt
ttttccttttattgtCAAATACGTTTATTCATTGTAAATAcgttattttc
attttgctttgtCACCCTATTAAATGAGAAAAAGCAGA
Run BLAST on NCBI

transcript from alignment at scaffold_326:242729..256910+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059340 ID=TCONS_00059340|Name=TCONS_00059340|organism=Clytia hemisphaerica|type=transcript|length=14182bp|location=Sequence derived from alignment at scaffold_326:242729..256910+ (Clytia hemisphaerica)
GGATTACGTGACTAAATTTGTTCAGAATTCGTTTtactttatttgatttg
attgacgCGATAATGAGCTCCGAAAATAAATGTTTCCCGAAGTCTTTTTC
TTTCTCCAAGAGTAAAAAGGTATGGGATTAcatatttattgaaaagaatt
ctTAACTCTTTCAGGACGACCCCAGCTAATTTTGTTCCATTTGGAACGAT
ACTTTTCGGCTGGATATGTAACTTTTTGTGAGGacctaattttaaaattt
ggcacactgAAAAGATAGTATAAAAAGAGCTTCCCAACGAACCTAAACAT
GACCCATTTAGATTGCTCCAAAGCTTCGACAATTACATCTAAAGTTGGAA
CttctaaaaaaggaaaataaattgattttttcgattttcgttGCCTTGAA
AGAGTTAAATTGTTAGATTCATCGACTTTTCTCGATTCCAAAACGGTATT
AAATAGGACGAATCAAAGCTAGATTAACATTCTTTATATATGGGTGTTGG
CTTTTTTTTGATACATATTGATATTAgataatatttcaatttgaattatG
TCAAATCAAAGTTTCTTGACACCTCTAGCTCTCATTGAgtataaacaata
gaatgtaAATGATCATTCTGTTTTTTAAATCTAATCAGTGAAAACCTGCT
TTTTTAGAAGAAAATAATACATATTCTACTAAgtataaaattatcattaa
aaaacgaaaattaaagATGTTACAAAGAGGTTTAATGAGATTGTCTAAAC
GAGGCAACAAAAAATCACCTCCAGGTtctttacaatctatagaaagcaTT
CGAACCATTAACCAGGTAGGTACGGATGCAGTTAGgagcacccctgtctc
agtcaCCGCCCCGGTTGAATTTTTTCTCACAGCGGGTATAAGATTTTTGT
CTAAAGGGATGGTGTTTTGGAGTgaacgttttttttctttgaatttcaaa
tggggatgaaattaaagTCGATTTTCCAGAGGGAGTCGGAAATTagaggg
tatttttcccaccggggacaaaattttagtcaaattttccagtgggttca
GGGTTTCACCGGATCAGTGACACAGGAGTGTGTTCCTATTGTCATACCAA
AAGAAAATAGCTGTTGGAGTTGAGATTTACACGGTTGAAATGCGGAGTGA
AAAACAATTTGTTAACCATAAGACACTTTAAAAGTATTGTTATGAAATTT
TATGAATAATGATAATGCAAATGATCTGGATCTggatcattgagtttaaa
gcccgaagggctagagttcaatatccaacctttctcaggcaaaaaaaagt
gaagccttaaaaaatgcgccgcatttttgacgacagattgaatctagcaa
ttcctttctttacgattgatatttttttcgagatttagcggtgaatttta
gtttaaatctgtcatttgtgtaaaaaccaggcgagccgctcaaggccgcg
caactttggtaggatttgttggcttcaaatcctaccaaggagattgactt
ctagccctacgggcttatacttcattgatctGGATCTTTGACTTCAAAGT
CTAAGATTAAAGCTttaaactttttcaactttttcaatcttttttgatTC
TAGGACGAATGGACGAAATATGATGAGCGTTTGATCGATGCCGCATACAA
ATCTGATCGTGAAAGAATCAAGTACGTATTTTCCGACCGACAATAAGCTG
CACGTAttccctctgatatgttttaataaaaaagatgctataatcgtgta
taaaattcccattCAAGatttaccccaaatttggggtaacttgtttcaat
tttctttaaacgGTTTTtgaaatccaatgattgtattaaCCTCTAGACAG
TCAAACTTTTAATTCAAATATAATGAAACTTGAAGATTTATTGTATAAAA
CCTACTAATcaagctaatcaagtttctCATAAACACAAAGACGGGTataa
ctctcggacgagaatttcatacacgatacgcatccctaTATTATGGGTAA
AGTCTAAACCAACAACTGACTTCAAAACAATGTCAGATGTCATGTCATGT
ACCAGCTTGGTAGAAATTAATAATTACCATCGATTATATACTCAAAATGC
AGCTTTATTCATATTTTTAGACCAGGTCTAGTCTTTGCTCCACTTTAAAG
ACTCCTTGATCGATTATAGACTTTTAAGCATAGTAATAACTAGTTTCTCA
GATTACCACattcaaagaaattaaaattaatacAATATAATTCAAATGAT
TTTAAATTCCAAGAACATTTCGTGTGAGAAAAATACTTGACTGAGTATCC
TCTTTCCAAAAGAAAAGTTTCAATATGCTCAATACCCTACTAATTAAAGT
CCATTCGATTTACGTGTCACTTATTTTTACTACAATGTGGAAACCATTCC
AGCGtaattatagaaaaatttcgttagagtggtttccacatgaCAGCAAA
AACAGAGTTGACTCTTAAGACAGATGGACTTTGATACAAATCATTACAAA
CCATTTatgcaaaatataaaaaaattcgaaattaaTTTTACTTCTTTAGG
GAAACCATTCGAAAAAAGGGTGCATCGCCAGTCAAAGTCAGTCGTGATGG
GCAAACAGCGTAAGTAttggaaaatctttggtctACCGGAACTATTTATC
AGTTTTGATATTAAGATGATAGAGTCATTGTAAAACGTAGAACTCAAgtt
taaatacaaaaattattGGAAGGGGAACTTGCAATTGTTAATTATTTGAC
TCGACAAAAATTTTTTACTGCTCAAATTGGACAACTTGGTTTTTATGACT
TTATATTTCACCATAACATGTAGGTTCCATTCAGGTATTGGAAATAAAAT
CTCTGTTTTTTTTCCTTAGACTTCATATATCAGTCAAGAAAGGCATGCTG
GATTGTGTTGAATTCATGCTTGCTGAAAATCCTGATTTATCAACTATCGA
TCTGCAAGGGCGAACTGTGTACCATATAGCTGCAAGCAAGGGTGACCCTG
TCATGTTGAAAAAGCTTTTAGATTATAGCCGGTGGTGCCTAGAGGTCAAG
GATACAAAAGAAATGACAGCATTACATTATGCAGTGGCGAGTGGAGAAAA
TGAGTGTGTGAAACTGCTGATCAATAATAATAGCCCAGTTGATTTAAGAG
ATGGTGAAGGGCGTACGCCCCTTTTGACCGCCATCATGAACGGCTATGAG
AAAATAGCAATGACTCTTGTTCTACACGGTGTTGATGTTAACGCCCCTGA
TTATAAAGAAAGGTTCGTATATTTGACACCCCTGTATCAATCACATACCT
CCAACATTCCTTTCGATAGTTTTTCTCTTTAGTTCTACTGCCATcagaag
tcaattttttttctaaatcaatttttgtcttaaatcaattttcactgatt
ttgaTAACTTAATGTGAGATAGTGATCTTGCACGATGAGTTCTAGCCTGt
ttgtaccaaactcttcttcatTGAATGACATACGGCAAGTTTTTGGGGTG
GTACAGGTTATATGACTTCAGAGTTTGATTTATTTCAACCTATCTCATAT
TTAGAACACCGATATTTATGGCTTGTATCCAAGGCATGCGAGATGTTGTG
GCACTCCTCATTTCAAAAGGTGCTGACTCAAAACTTGTCGATGCAGAAGG
AAAAACATGTAAGTTTATCTTTAAACTCAAACCCAGTCTTTCACTCGAGA
AAGCTATCGTATCTATCAGTAGACTGTGATATAGTCTGAGataaatcact
atctaagaaataagcccaaagccgaagaaaattcgcaaacgggttttttt
gccgaaaagagtttacagccgttagagtttgccagtcttcttcgaaactc
tctTACCGTTTTCTTTCCGTACCGACCACTTTAACGCCAtgccgccatat
tttcccgcctttactatcactgtaacggacgataacatcttCTAATCTAT
CAGTAAAATTAAAGAGTGGTACTcatagcaaactagtctgttaattaatc
atgttaGAGGGCGGGAATATAAAGGCGACGGGCGTTTGCtaaaataggag
ctgcgtaaGAGAATAAGCAAAAGTCATTGCGAGGTTGCTGATTTCTTctg
ctttcagcccttgccgctgacaaattttcttcatacgcttacctaactcc
tacgctcactttctCTCGcatgataccgttccagcccgaatTGCATGTCA
GTCTAAGAGTGGTACATGTGGCTCTGGATAGGTTCCATATCTTAACCCCA
CCGATTTATGTGGCTTTAAGTtttaaaaaccgatttttccaaccctccaT
CGGGTAGCCATAGCTCAGGATTTTTAATCTTTAAGTTTTTGTGCTGAGGC
TATTAGTTTTCTAAAGGTACAAAAGATTTTTGTCTGAAAACGATAAGATA
AGTGAGAAGCAATATATGGAGAAAAGTGATCGCTCCCCAAACCCCTGGAT
AGCTAGCTAGAAATAGGAGCATTTCTTCCGAATGTTGTAGAAGGCTTAAT
tatgaaaatcattttttcctCTCATTTTCAGTGGAGCAGATAGCTGGTGA
AGCTGGGCACGTGGAAATTGTTGATATTTTACGGAACAGTGCTGATTCTG
GAATCATGGATATTGAACACATGCATGAAAACGATGGTACGTCAAAAATA
TAATCACCTTTTGAacaggctgctggcatccactaacagatttgtgctcc
ttatactacctgaGGTTTTGTAGAAGTCCGTTATTTAGACTACCTTTTCA
ACAGTTCAGGATCTTTGTTGATGGTGGATGATCATATCaactacacaaga
tcactaaaaagggaatagttttgAAGGCGGGAGGAATTTGAAAACGGAGG
TTAGCCCGGGGCGGAGTAAACACTGGCGGAGGCGTTTCCAGTGTTTACGT
TTGTTATAAATTCTACCGCCAATtattttttcccgtaaaccactGTGATG
ACTGTAAACTCTGCGCATCATTTTTTCCCGCTTTTACTCACCCGTTTACT
TATCCTCCAACGATTTGAATTATTTCTTAtagaaaacgaagaagaagaag
aattacATGAAAACGGAGACGTGGATGAGACGGATCATGATATCCAAGAA
GAACAATCAACAGAAATGAACGACAAAGAAAACAAACGACATAGTAGTAC
CAGCTCATCTTCAgcacaaaattatattttagaagTCAAGCCTACACTGA
GGTCACCGACGGATCGTGTACGAACAGACAGTGCAAATAGGCGTTCCATT
GTAAGATTGTTCGACCATTCTTTATTTCTTTAGAATGTGTTTCATACATG
TGATTacatccccgggggggggggggNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCGGGGATTGCATTTTCCA
TGCGCCCAGCTGGCGCACAACGTTATAtgtcaacgtttatctaatgttca
aaACGCTCTTATATAAAACAACGTTGTAGTAATACCACCTGCGCATAAAC
ATTCTCCCTACTGCAAGAAGGCTGCAAtaataaaaaacactttttggcaA
TTTCCAAACTTACAATCACTTGTTTCTTTCTCTTCCTGTAGCTGAAGAAC
GATGACTCTAGTTTAACGACGTCAATTATCGAATCGTTAATGGGTTACGA
TATCGGAAATGAAACAATCAACGAAAGCACCATCGCTGAAACgcaagaaa
aagtaagtatgcacttttttataagaacatcccaacatttttgaagcctg
cagatgtttttaacttttttgccatttttgccaGCGAAGTCTTTTTTTgc
ttacagtatgtggcccccaaaacggcgatcaaatttgaaatttctctcat
atctagaggaaaagagattttacaaaaatttttgctgcatgaaaaccttt
aacatctctactttatttcctcgaagttctttttcaaaattttcaatttc
aacaatatttttcaatcgcttaaagatggGTAGCTTTTCTCtagtggccc
ccaaaacggtggtttgaaattttagcgatttctcgagatatctttaagat
atgaacacaaaattttgaccatagtttcgaaatatgatttagagggtttt
ggtcataaatttatttgataaaatttttacagtatacccctggttgtcaa
aatgcaggtttgaggcccccaaaacggaggtttagttaaaatcaaattat
taagcccagtggtactaggggggggggggactatgaacatatttgtgttt
tcccttaaatttacgacccgatggatgtaaaatttatgatttgtatgaaa
tatttcaagattttcgatattgcatagtccaaactgaaaatttagaaatt
ttcaaaatggcaattttgattcaacaacgtcttaatcaagtttttgaaaa
caaatctcttttgaaaatagttccattcatgtatggaataagctgtgaaa
atattagaaaaaaagtctaactgaaactgaaaatattaagctttaaagat
acttttctcctatattttgcaaaaaaatgacagaatctgccgtttttgct
gattcagcgaaaaattttatatataatgttaattttttgttataaactat
taactcaaggtgataggaatagaattccaagaatttttgctttttctcat
atttagtaTTTTCGgctttgtcaatgctgattctagggctctaaaatact
ggttgaccttcaagatgctttatattttacccagcctctaaattcacaga
tgtatttgcattttctgaacggcattaggtgtagaaagtttcctataccc
cgtttccataacttattttcaatatccaagtagctagagtgagttatatg
caatttttatctaattttgatgttacaatatttcctttagacgcaaatat
tttattttgaatctgtctcaaaccagcaaaaacatgctcatttttaagta
taaccattattctttcaaaataaacaaaaatcgtttaattctNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaatcgtttaattctgataa
atctacaagtcagaatcttcattttaatgaaaacctccgttttgggggcc
gtctccgttttgggggccatatactgtatatagttctcataaaaaacgtg
tatagacATTTCATAATTTAAAAGGATCTTGGTTCTAAATTACTGATGCT
TTAAAGGATGCATGGTTAGGAATCTGACAGTTATACttcagtctttttct
ttcaaattatacCACGCGGGAAGGGCGgaggttcgaaataccgttttccc
gtcaaagcTTTGGCTGAATCCCGGAAGCCCCGGCACCCCGGCACATAAtg
acaccgtcacaccggttatAATACCGTTTTCCCGATCTCggcacaccgta
aaagtacagtCTCTTCCCCTACCATAGCTTTGAAGAACCTGGACCATTGA
TTTTCTACTGTTTTTCAAACAGCTTTGTGGCATGATGGATGTTAACTTtt
gatttctcttttttttatcaaaatcagtATGAACAGGAGAAATACGAAAT
GCAACAAGCAATCTCCGAACGTGATAAAAAAATCGAAGAATTGGAACAAG
AGGTTTGTAGCCTGTttacgttatttcaacgttcatttaacgtgtatatg
gacgttatgaacattagattagcgctaaaacaacgttgtgtaccagctgg
gaaaTCATTTTAGAAGAGCATTCGTGTGGATTTAAACTGAGGCCAGCTCC
TGAGTCAACTTCTTAATCTTGTACTGAATTTGNAGGATTTAAACTGAGGC
CAGCTCCAGAGCCAACTTCTTAATCTTGTACTGAATTTGTGTGTGATTTT
TGGGTTAAAAAATGATAAGCTAGAAGATAAAATTTGAGCAACTTATATac
ttatatttttgaaaaattattaaacTCATCTTAACGTAACCCCAAATCGT
GGGCTATAATTTCTTTACCTGTTCTTCACTTAAACCAATAAAATCGATTC
ATTTCTCTCAATTTTAGATTTcaaatatcaagaaaaaattacgtTGGGAA
ACTGATATGCGCTTCCAAGCAGAAAAAGAAGTTCTGGGACTGAAAAGCCA
ACTCGAAAATATCGATGTGAGTATTCCAACATCCTTTTCCCCGCAtaggg
gataaaaatttctattgaaatccgaATGGGGATAAAGAATCTATTGTTCT
aagcttaaaaaatccagtAGGTTTTGGAGTGTAAGAGCTGTAAGagaaaa
ttgcttgaaaaatcATCTCTATAATAAGTTCACTAATTtacatttctttc
aatttttagatTCAACACTCAATCAGttcagaaaaagaagaaactcaaAC
ACAAGTAAAAGAAGAGGAACCTAAAGAAACGGAAATCGGAAACGAAGAGA
CGGCGGAAACGGAAAAAACGGAACAATCAAAAGAGGAAACATCACAGGAA
ATGAAAGAGCAGTGCTCTGAAAATGAAGAGGAGACAGGAGAAGGTGAATC
ACAAAAAGAAGTTGAAACGAAAAAAGAAGGTGATCATTATAAATCATTAA
AGGCCATTCCATTAGGGAGTGGACGAACTTTTCCAAAGGGTCATCGGAGA
ATGATTTGCAAGGGGGggaactgattttagttcgtccaccctcacttttt
aagatatgaaaaaaaatttccaacagttgttttgcaatttttgccatttt
tcatggAGTAtccaagaaatattattttgtcTTGTTCGCCCCCCCTGtat
gaaaatttaatggaacagcctaATGAAAATCTAAAAGGCTTTAAATATTT
TCCACAATTTTTCCAAAGAAAGCATCAACCAGCGATGGGTGCTAGCTGCG
AACGTTTTAAAACTGCTTTTGTTTGCTACCATACCTTTGGGGCTTTGCAA
AGGAACCACGAATTTAATACATTTAGGCTAGTCTACCTTTATCTGTAAAA
CTCGAATTCTAATAGATCTTTTAATTTCTTATTTGTAGAAACAGTACAAG
ATCATATCAACTTTTTGGAAGATCACATATTAGGGTTAGAAGATGACATC
GAAAAAAGAGACATTCAAATTACTAACTTGCAAGGAAAACTAGAGGTAAA
TTGATATAAGAAACTTCAGAAAGACACAACAAATAACATACAGCCAACTC
TCTCTATTTCTAACCTCTATAAATCgatttttttctgtaattcgagcTAA
AACATTGGTCCTTTCTGCTGGAAAGAAGTATTTAATTCTATCTATAATTC
GATTCTTTCTCTACTTTTAAGAAATTtggagatcgaattagagagagtca
actataATTTAAGAGGGAACCAAAACTATTTCGTTGAAAAGAATACTGTA
GAATATATCATTTGTGCAAGAAATATTGTGAATCTTGAAATTGCACAACC
TTTTCACGGATTGGTTAGTAAAAACTTGCTCTCCAAACCTATGAGAGCTA
AATTCAGTACAGCCGGATCTCTATAAATTGATCACGTACAGGGAACATAA
ACATTCCAGTTAAGGAATTTTCGACTTACGGAGTAAGGTTTTTAAGACAT
TGTTATGTGAAGGGACAAAAATAaccttgttcgagttatagaggttcgat
ttGTACTACAACAAATATTTATATCCAGAAATTTAGACATCGATTTCGAT
ACTTCCTTTAGAATGCTCAAGAGTTGGTGGACCTCAACAATAACACGACC
GTTTCCCTCGAAGTATTTAACAAATATAAAGTAAGTATTACAGGtttttg
tactagtaatctcatggttataagggaaattcgggataaatttcccgagg
tcaattttgaaattttttgaaatttcccgagtgcaacgagggaaatttaa
aacatttcgaaatttgaccgagggtaatttatccagaatttcacgaaaac
aagcatgggattcctggttaatctcatggtttggattgaaattctaacaa
ttttgaaagacgtcaatttaacactggaattcaatctgaaaatttaaaaa
aaggtctcaaaaagtcatagaaacgcgaatcgagttttaattggatagta
ttccatttacttaagcctttgaagttagtaagaaagtcgaaaaaggtgat
gaatttccaaacgatgaaaattttacttttgcgggaaattacaaaatcta
ggagggaaattacaaaagctaggagggaaattacaaattaacgtaagcaa
aaatgtcaatcgaatttcaatcaactaTGAGATTATTAATATAAACATCC
ATCCATCTAGAAGCTTCcgaatattcttaaatttttgagttctaagcttt
caaatgttcctaacttgttcttattttccccattttgtgagcattttttg
tgttatttcctaagaaatcgggtggtTTAATCGggtttaaatgttcttaa
cttattcttgatatttttaccTTCGAAGACCATGTTCTAATAtagctatt
ttataaaaaatatgtaataGGGATAAAAAGTTTGTGATTTGGTATACTGG
GggtaaatgtttgaaaatttctaacaaaatagaccttttcattaaTTACG
TCaggaacatcacttgcctcgtatccaaacaattaccatggtgattatgt
ctcttgagacattaaattatttttttttaaatagaaagaaatagaaagta
gttttagtaaaatccgctgggagttaatcaccacggcaataatttcaaaa
cgaggcaagtgatgttcgtgacgtaatttatgaaaaggtctattagagaA
ATTTCAATAATCAATAGTGACAACAAGGTCAATATTTCTCGATCCAAGCA
TGTTCTTTCAAGCAATTTGGACTtttattaaaatgttattttaatgtttt
tatattttatactttTAGGCGGAGAAAAAGACAGAGAGGACACAATATCG
CgaacaaatcaaaattttagaatCACAATTATCTGAAATTCAAGCCTCTT
TGAATAAAGCTAAATCGGAAAAAGAATATTTGGAAGATCAGATGAGCTCT
GAAGCTGATGAGAAAAATAACTTAATAAACACGATGAGAGATGAATCAca
taaattacagaccagaatgacAGTAAGGATCTTGTATTTCTATAAGTTTG
CGAACGCAGTTGGAGGCGGCCCGAATGAGgctcctcttttgatagctatc
tgggagggcgccactctttctccctggatttctcccaCTTACCCTTCAAt
tgattgctgagcatcaagcagagaggcatcaagtatcaTTTTCGTACTAA
Gtacgaagtctttggtatgacccggttgggaattgaacccacaaccttgc
gcaacgtagccgaatgctctaccactgcactacggtcgcatCTACTTTGA
TAATGGGATACAACTCTTCACAAAATTTTACGGCTTTTGCAGTTATTACT
TCAACCTTTCAAACAAGGCTTTCCAAATGAAATATGAAAtcttgatttta
ttcaaatacttttctATTTTCCAGGAATTCGAAGAGCAATACACGAAAGA
TATTTCATGTTACAGAGAAAATATATTGTCTCTTTATCAGGTAAGAGATT
ACTGTATTTTGAGAAAGACTGCCTTCTAATAATAATATTCTATGTATAAC
CAGAGTTTTGTTGTGCCAAGAAAAAGATCCTTGGCTCTGAGACAATTATT
TCTGGTTTTTATACCCCTTATCATGAATTACtctgaaattcaaaattgac
ctGTAGTGACAAACTGTaagaattttatcgcgcatgtttCGTGATACTCA
AAGTCCCCTAGTAATAATTTGAGCCGGTTGGTATAAGATTTATTGTGTAA
AATTACGAAATGCTTTTGTTTACTGGTCGACTGagaactaaagtctattc
acgataagtgtgcactcttttttcatttacctataacttttgaagaaatt
cttcaatctttataaatttggtagcattggaaagatattagtgattgaaa
caatttgaaataaaaaaaactttaaaaagattataaaaatgaagattaaa
atgaagaagaaaaaaatgaagatcttgtagaaaagtgctataactatcat
tttcactgaagtgagtccttaatcatcgaacgttatcactgtgaaaaaaa
ttctcaaaaataatcattcagtcaaaagatatcaaacaaagttataagct
gattgaagtctaaaaacgctgttttNNCTTatgaactttgtatcataact
ttatattgaataaatattttaataaaatttctttacagtGATTATCTatt
aagatcaaaaaatctctccaatgaaaatgaaagttatagcacttttctac
aagatcttcatttttttcttcttcattttcatcttcatttttagaatttt
gttaaagatttttttatttcaaattgttccactcactaatatctttccaa
tgataccaaatttataaagattgaagaattccttcaaaagttataggtaa
aagaaaaaagagtgcacacttatcatgaatagactttagtttagTTCTCC
AATCTCCAATGGAGAATTTTTTATCTTACTAATACCGTAAATAGACGAAA
ATAtgagttgaaaaaaatatatatgtgaagaaattcatagaatttctgtc
caactatcttctttcaggaggtTTAGGTGgtagagcagcatatgcatttg
ccttattaggactcgtcagcactgcatactgcaccctggctagGCAGATA
GAATTGCCTAGCATCTCAATTCTCACGCCATAAAactgaaagaatatttt
ttaatcttttagaATAAAATGGATGAAAATCTGGATAACATTCTgaagaa
aattgttttgctgAGAAAGCAGGAATCATGAGATTCGTTGATGAGGCTGA
GATCTAAGAATCATAACAAATTTTTGAACGGATTTTTGGCTAGTCTGGAT
GGCACTATTGAATCTAAGATCGGATAGATAGATGGGATTTCGTGACCATG
ATAAATAAGTTATATTTCTGACTGACGATCCCGAACATGGTTGAACTAAG
GAGTTAGTAATATTCTAAGGTGTAGCTCTATTTTTACCCCTCAAggcaaa
ctcgaacccagtcctttAGTAGTtcgctttttatgattttgatggcACTT
ACGAAAGGGATATCGACTGTATCGCATCcatcaataaaatttaaaaagcg
aTGTAatgcaccttttcgaccgtgTTCGCGTGGTCAGGTGCGTGCCACTT
AACTTTTTatttatccccctaaactcaatgcaattcttttttgacacctt
tttcaattgtctataggtgcgaaaaaagactgaaacggttttagggtggt
aaaacggacaaattAATGCCCGCGCGGccattggcggctacggtcaaaaA
AGCGTattggctctgggtacgagatttcCCTTAAGGATTAATATTTTAAC
ATAGTTGGACTAAAATACATCAGAATACCTTTTATATTTGTTTCCGTATG
GGTAGTAACTGCTTGAGATTTAAACCTTCTCATTATGGTTTAGATGAGAG
ACAATTAATAGAATTTTCTACCACACTCCACCCAAAATCAATTTCTACAA
ACATTTAAGATTTGTATATAATACTGTTTTgatattaaatatttttaaga
taTAATAGATTAAGCCTTCAGCAATACttggtcaaatttttagggGATAA
CTAATGTCGAGGAAAGGCATGTCATATGATATACTAAGACAATGAacgaa
gagattttttttgattttatttatttattacgTGATACAGTATATATTAA
TATTCCAATATTAGAGAAAGCTTAAAAAACAAGAAATCATTCGCCCAGAT
AACGTGATTCTGATTCATCGCgttgaaaaaatctaataaaaatggaatgA
TGGGTTTAAATCTAACTTTggttatattttttcactttttgggaataaaa
tgtaataaataaattttgtaccaaatatttttataccaatttttttttcc
ttttattgtCAAATACGTTTATTCATTGTAAATAcgttattttcattttg
ctttgtCACCCTATTAAATGAGAAAAAGCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037357XLOC_037357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059340-exon-scaffold_326-1491911889:242729..242847TCONS_00059340-exon-scaffold_326-1491911889:242729..242847Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:242729..242847TCONS_00059340-exon-scaffold_326-1510915933:242729..242847Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:242729..242847TCONS_00059340-exon-scaffold_326-1575043694:242729..242847Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:244332..244399TCONS_00059340-exon-scaffold_326-1491911889:244332..244399Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:244332..244399TCONS_00059340-exon-scaffold_326-1510915933:244332..244399Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:244332..244399TCONS_00059340-exon-scaffold_326-1575043694:244332..244399Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:245278..245337TCONS_00059340-exon-scaffold_326-1491911889:245278..245337Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:245278..245337TCONS_00059340-exon-scaffold_326-1510915933:245278..245337Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:245278..245337TCONS_00059340-exon-scaffold_326-1575043694:245278..245337Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:245598..245990TCONS_00059340-exon-scaffold_326-1491911889:245598..245990Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:245598..245990TCONS_00059340-exon-scaffold_326-1510915933:245598..245990Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:245598..245990TCONS_00059340-exon-scaffold_326-1575043694:245598..245990Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:246283..246386TCONS_00059340-exon-scaffold_326-1491911889:246283..246386Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:246283..246386TCONS_00059340-exon-scaffold_326-1510915933:246283..246386Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:246283..246386TCONS_00059340-exon-scaffold_326-1575043694:246283..246386Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:247260..247364TCONS_00059340-exon-scaffold_326-1491911889:247260..247364Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:247260..247364TCONS_00059340-exon-scaffold_326-1510915933:247260..247364Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:247260..247364TCONS_00059340-exon-scaffold_326-1575043694:247260..247364Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:247761..247978TCONS_00059340-exon-scaffold_326-1491911889:247761..247978Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:247761..247978TCONS_00059340-exon-scaffold_326-1510915933:247761..247978Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:247761..247978TCONS_00059340-exon-scaffold_326-1575043694:247761..247978Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:248470..248580TCONS_00059340-exon-scaffold_326-1491911889:248470..248580Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:248470..248580TCONS_00059340-exon-scaffold_326-1510915933:248470..248580Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:248470..248580TCONS_00059340-exon-scaffold_326-1575043694:248470..248580Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:250406..250480TCONS_00059340-exon-scaffold_326-1491911889:250406..250480Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:250406..250480TCONS_00059340-exon-scaffold_326-1510915933:250406..250480Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:250406..250480TCONS_00059340-exon-scaffold_326-1575043694:250406..250480Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:250896..250994TCONS_00059340-exon-scaffold_326-1491911889:250896..250994Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:250896..250994TCONS_00059340-exon-scaffold_326-1510915933:250896..250994Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:250896..250994TCONS_00059340-exon-scaffold_326-1575043694:250896..250994Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:251188..251407TCONS_00059340-exon-scaffold_326-1491911889:251188..251407Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:251188..251407TCONS_00059340-exon-scaffold_326-1510915933:251188..251407Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:251188..251407TCONS_00059340-exon-scaffold_326-1575043694:251188..251407Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:251867..251973TCONS_00059340-exon-scaffold_326-1491911889:251867..251973Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:251867..251973TCONS_00059340-exon-scaffold_326-1510915933:251867..251973Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:251867..251973TCONS_00059340-exon-scaffold_326-1575043694:251867..251973Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:252540..252608TCONS_00059340-exon-scaffold_326-1491911889:252540..252608Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:252540..252608TCONS_00059340-exon-scaffold_326-1510915933:252540..252608Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:252540..252608TCONS_00059340-exon-scaffold_326-1575043694:252540..252608Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:253747..253950TCONS_00059340-exon-scaffold_326-1491911889:253747..253950Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:253747..253950TCONS_00059340-exon-scaffold_326-1510915933:253747..253950Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:253747..253950TCONS_00059340-exon-scaffold_326-1575043694:253747..253950Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:254353..254418TCONS_00059340-exon-scaffold_326-1491911889:254353..254418Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:254353..254418TCONS_00059340-exon-scaffold_326-1510915933:254353..254418Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:254353..254418TCONS_00059340-exon-scaffold_326-1575043694:254353..254418Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1491911889:255641..256910TCONS_00059340-exon-scaffold_326-1491911889:255641..256910Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1510915933:255641..256910TCONS_00059340-exon-scaffold_326-1510915933:255641..256910Clytia hemisphaericaexon
TCONS_00059340-exon-scaffold_326-1575043694:255641..256910TCONS_00059340-exon-scaffold_326-1575043694:255641..256910Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_326supercontigscaffold_326:242729..256910 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.26606e-10	0	0.795827	0	0.000772121	0.00443055	0.293942	0.00267204	0.472377	0	0.462389	0.793485	5.36264	3.46363	0.414414	1.25545	1.25258	0.765973	4.00036	1.86666	0.702894	1.01025	0	1.06796	1.57407	9.59754e-07	1.55101	0	1.38089	1.78694
Blast
[Close]
BLAST of TCONS_00059340 vs. Swiss-Prot (Human)
Match: RAI14 (Ankycorbin OS=Homo sapiens GN=RAI14 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.041e-38
Identity = 79/206 (38.35%), Postives = 119/206 (57.77%), Query Frame = 3 
Query:  120 DEWTKYDERLIDAAYKSDRERIKETIRKKGASPVKVSRDGQTALHISVKKGMLDCVEFMLAENPDLSTIDLQGRTVYHIAASKGDPVMLKKLLDYSRWCLEVKDTKEMTALHYAVASGENECVKLLINNNSPVDLRDGEGRTPLLTAIMNGYEKIAMTLVLHGVDVNAPDYKERTPIFMACIQGMRDVVALLISKGADSKLVDAEG 737
            +EW K D+RL+ A    D E++   + KKGAS  K   +G+TA H++  KG ++C+  M+    D++  D  G +  H+AA       ++KLL  S+   E  D+   TALHYA A G  + V++L  + SP++L+D +G  PLL A+ NG+ +I   L+ HG DVN+ +   RT + +AC  G  + V  LI KGAD  LVD+ G
Sbjct:   14 NEWNKNDDRLLQAVENGDAEKVASLLGKKGASATKHDSEGKTAFHLAAAKGHVECLRVMITHGVDVTAQDTTGHSALHLAAKNSHHECIRKLLQ-SKCPAESVDSSGKTALHYAAAQGCLQAVQILCEHKSPINLKDLDGNIPLLLAVQNGHSEICHFLLDHGADVNSRNKSGRTALMLACEIGSSNAVEALIKKGADLNLVDSLG 218
The following BLAST results are available for this feature:
BLAST of TCONS_00059340 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAI146.041e-3838.35Ankycorbin OS=Homo sapiens GN=RAI14 PE=1 SV=2[more]
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