TCONS_00059359 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059359
Unique NameTCONS_00059359
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1662

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059359 ID=TCONS_00059359|Name=TCONS_00059359|organism=Clytia hemisphaerica|type=transcript|length=1662bp
CTTGATCTTCTGCTCTTGTAATGATAAGCATATTTTAAGAATTACCAAAA
TAggttaaataaaaatattgtaaaaatgtgaagaaaaagatcaaaactCA
CTTTCCACGGTAGCCATCTTTTTTCGAATGTAAATAAAGTCGAGGTCGCT
ATGTACATTTTTGTCGGTTCCGTAAAGTTTGTCagtcaaaccaaaacaaa
aaagatggCGGCCAAAATGCTAGCGAAACTTCCAAAACTTGAACAACTTT
CACCACTTGTGATACGAGTTTTAGGATGTAATCCTGGACATATGACATTG
CAGGGAACCAATACTTACCTAGTAGGCTCTGGAAAAAGGAAAATTCTGAT
TGATACTGGTGAAGAGAACAACTTAGACTACATTTCCAATTTGAAAGATg
ctttgaaaaagtttcaatgTTCCATTCAAGAAGTTATCCTAACACACTGG
CACCATGACCATGTAGGTGGACTTGAAAACGTGATCAAACATAAACTGAT
ACCAGCTGATTCAAGTTTACTATCAAAGTTCATAAGACCTGGATACACCG
AGAAAATCCCCTTCGATGGAGAATATCTAGAATACACGTATGTTAAGGAT
GGTCATATTTTCACCACAGATGGAGCGACTATTCGTGCAGTTTTTACACC
AGGTCATACTTCAGACCATATGTCATTGTttcttgaagaagaaaatgcgA
TTTTTTCTGGTGATTGTATTTTGGGTGAAAGTACGGCAATATTTTCTGAC
CTTCACACTTACATGAATTCGCTGGAACGATTAAGAGCGTTGAATCCTGG
TGTCATTTACCCAGCACATGGTTCCCTCATCAATGATGGGCATACCAAAA
TTGTAGACTATATTAACCACAGGAACGCCCGAGAAAAACAAATCTATGAT
GTTTTGCTGGAACACAGTGATTCTTCGCTCACATCCCTCGATATTGTCAA
GCAAGTTTACCTAGGCTTAGCGGAGCAACTGATACCGGCTGCCATGAATA
ATGTGGAACTACATCTCaagaaattagaaaaagaaGGGAAAATATCCCAA
GTAAACGATGAAATGTGGACGAAGGCTAAGCTGTAATAATAAAGGAGAAG
ATTTGGAATTATCCGGCGCCTTAACCTGATTTTTCGCTTGACTGGAACTA
AAGTCGGAGAATTATTTTTCACTGGAAACCTGGATAGATGCTAGGAATTT
CGATCCCGAAAAGTTACATTGCCATAAGATATTGGATGATGAGTACACTT
TTTCAGCTGTTGATGATTTTTTCATCGAATTGATAGTAAGTGGGAGTTCA
ATTAAATGAACTGAAGTTAAATTGGATATACTTCTTGGGTTACTTAAAAA
GGATTATTTTCGCGGTTTCGTTTTCTCAAGTTTTGGATGTGGTATGACAT
TTTCAGGTGCAGGCCTGTTTTcaagcttatttgcttcaaatcCACGggaa
atttttctaagaaaaaaccTAATTCGCAACATTTAAATCTACGATATATG
ggaatatttagatttttttgtagATAGATAAATTTATAAcagaaatttta
tgatttttataatttttaaaagaagaattttcgaaacattaaaaCATGGA
GGTGTTTTCTGTAATTGTTCTTATGTGCCAAAAGTTTGCCATCAGCACCT
CGAACAGCAgcc
Run BLAST on NCBI

protein sequence of TCONS_00059359-protein

>TCONS_00059359-protein ID=TCONS_00059359-protein|Name=TCONS_00059359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MYIFVGSVKFVSQTKTKKMAAKMLAKLPKLEQLSPLVIRVLGCNPGHMTL
QGTNTYLVGSGKRKILIDTGEENNLDYISNLKDALKKFQCSIQEVILTHW
HHDHVGGLENVIKHKLIPADSSLLSKFIRPGYTEKIPFDGEYLEYTYVKD
GHIFTTDGATIRAVFTPGHTSDHMSLFLEEENAIFSGDCILGESTAIFSD
LHTYMNSLERLRALNPGVIYPAHGSLINDGHTKIVDYINHRNAREKQIYD
VLLEHSDSSLTSLDIVKQVYLGLAEQLIPAAMNNVELHLKKLEKEGKISQ
VNDEMWTKAKL
Run BLAST on NCBI

transcript from alignment at scaffold_326:367944..385326-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059359 ID=TCONS_00059359|Name=TCONS_00059359|organism=Clytia hemisphaerica|type=transcript|length=17383bp|location=Sequence derived from alignment at scaffold_326:367944..385326- (Clytia hemisphaerica)
CTTGATCTTCTGCTCTTGTAATGATAAGCATATTTTAAGAATTACCAAAA
TAGGTTAAATAAAAATATTGTAAAAATGTGAAGAAAAAGATCAAAACTCA
CTTTCCACGGTAGCCATCTTTTTTCGAATGTAAATAAAGTCGAGGTCGCT
ATGTACATTTTTGTCGGTTCCGTAAAGTTTGTCAGTCAAACCAAAACAAA
AAAGATGGCGGCCAAAATGCTAGCGAAACTTCCAAAACTTGAACAACTTT
CACCACTTGTGATACGAGTTTTAGGATGTAATCCTGGACATATGACATTG
CAGGGAACCAATACTTACCTAGTAGGCTCTGGAAAAAGGTAATCTTTTCT
TATTTATTGTTTTTAGCTTTTGAGCTTAGAGTCAGTTCGCCAGTGCACGA
ACAGCCCCAGTGCACGCGAACGAGCGTCTTTGAACTTGAAAAAAACAACC
AAAAACAAACTTCTATAGAACTTCCTTTGTGCAGCAGAATCCTCAAACTA
TTCCTTGCAATCTTTCCAAAAATTAAAATAAACGGAGCACTAGAACAACA
CCAAACCGATTTTGAACGAGACCAAGTAAAAAAATCACGAAATTCAGCTG
ATCGTGACCGTGAGAGAAAATGTTTCTTATAAGAAAATTTGCACAAGAAG
AGTTCTGAAAATGACTTTCCTCTTTTAAAAACCTTTTATCTTCCATCACA
CAAAATTTCATTGAAACATATGTTAGCTCATTAATTCAAAATCAATAGAA
ACCAGGGGGGGGATCAGGGTNGGGGGGGTCAGGGTCCAGGATACCAACCC
AGGGCCCAAAAACCTGACTTTTCGAGATTTGAAAGTAGTAGACACCACCA
CCCCCTAAATTGGTATCAATACCAACTCGAAAACTCTAATTTTCTGAAAA
AGGGGGGACCCACCCCCTAAATTGGTATCAATACGAACTTGAAAATCCTG
ATTTTTCTGAAAAAGGGGGATCCANGGGTATGTGCGGCGGTTAAGGGTAT
GTTTTTCAAAATATCAGAAATGCACTGTAAAGGTGGACTTTTGATAAATG
CACTGGATGGGTGGAAAATTCAGCAAATCTAGGAAAAATTGCAAATTTTG
GCTGAAAATCTTGATTTTTTTGCTCTAAAAGAGTTTAAAATATGAAAAAA
ATGCACTGTAAGGGTATGAATTTCACCGATTTTTTTCTGCACTGTATGGG
TGCGATTCTAAAAAGCCATTTTCTTTGCCGCACTGCCGTCAGTTGGTAAA
CCCACTGCCCCCGGGCTAGTTGATAAACTAGACTAGATAAAAGACTCATT
GTATTAGGCACGCCTTGAGTCTTTGTAACATAGCCTGACATAGCCTGTAT
GATGAACGTTATGTACAGAAAAATTTTATCACAACTAAAAATTCACGACT
TGATTCAGTTTGTTCAACTCTAGTTTTGAATGAATTTTGGTTGATTGAAA
GGATTGAGAAAAGCAAAAGTTAAATAAGAATTTAATTTCAATTATAGAAT
GAAGAATGCTTTTATATGGAATCAGGGTAGTGTAAACGATTCAAATAAGT
TTTTATACTTACATTATACAACATTTTAAGTCAGATACTAATTTCAAATT
CAGCAAAAATTAAAAAAAGGGGGACCCAACCTCTCATTTTGGTATCGATA
CCAACTGAAAGATTCCCTAATTTTCAAAAAAAGGGGACCCCACCCCCTTA
TTTTGGTATCGATACCAACTTGACTTTTTGAAATTTGAAAAAAAAAATTG
ACACCACCCCCCGGCCCTGGGTTTGGTATCTGGATCCNNNNNNNNNNNNN
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NNNNNNNNNNNNNNCACACTAGCGTCCCGCCAAAGGGTAGAAAAAGATTA
ATGCTGCGAAAGCGCTATATCAGCTATATCGTTAACCTCTGAATCTCAAG
CAAAAAAATGCGCCGCAAAACTTCTAAAGGGATTCATTAAAAAATAGCCC
GCTGCTTTTTAATGAAATTAACGTTCTCAAAAACTATGAGAAATTGTCTA
AAATTTGAGCCATAGATGAAAAAATTTGAGCCTTAAGCCAACTTTGAGAA
CTAATTTGAAGGATCAACTTCCCAAGAAAATATCTACGACGGAGACAGAA
CCCACTTAGATCCGTGCACTGCCGGATAGGCTATTTCCCGGAAATTTTGC
CGGACCTCAAACACTGACCCATTTACTTGTGCAGAATTGTTTTTACTTTG
GCGTATAAACAAGGCCTTAAAAGTCGAAGCGCTTTCTCGGGAATTGAATT
GAATGACAAATTTTGGTTGGTTGATTTTGTTTCAAATTTTCAAGTTTTAA
TTAATTGTCTTGCGAACTTGATTCAGGTAACTCTCATCCTTGTTGTTGCA
AATCCATCCTGTAGATGACTGATGTTGTTTTTTCTGAAAGCTTGATTTCC
TAGTGTGACTAACTGGAAGATATAGCTTCCTCATGTCAAATAATTTACTC
TCACACTTCACCAAGTGTACAACTTCTATGTGTTCACTCAAGCCACTGAA
AACTTGGCAATCCTAGTGATGTACAGACAACCTAATGACAAGAGCAATGG
GAATCCTTCAACAGTAAAATATTTTCAAACACCATTGAAAGGTGTAAAAC
TTGCCCTTTCAGCCCTGGAACCTACCCCTAATATAATTTTTGGTGGGGAT
TTTAACCTTCCAAAGTCAACATGGCCAGATGGACTACCCAAACCTGGATG
CTCACTGGAAGAAAGGTCAATGATAAATGACCTGAATCAACTTTGTAACA
AGATGTTTTATGTCCCAGTATGTTTGCCAACCTACACATAAAGATGGGAA
CATCCTCAACCTTGTTTTCACAAACAATGAAGATCTTATTCATGACTACA
CAGTTATACCAGTATTACAGAGTACATACTAATGTTCCACAAAATGATGA
TGACAAACCAGAACCTCATTCAAAATTCAATGCATTGAATTTTTTCTTAC
ATGAAATTGAATAGAAAAAGCTGAAAAATGACCTGAATCAAATTAAATGG
AATGACAAACTAAGCAATGATAATCCACAAGAAATCCTATAGATATTCAA
CCAAATTTGCCTGGACAAATGTGAAAGTCACATTCCAGCTCGAACAACCA
AGGATACCAAGAAAAAGTCTAAAATTGATAGATATCGCCGTTCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTATAAAACTTTTTCTCTTGACTTTC
ACTTGGTCAGAAATTGCAATTAATAGGCCCGTGACTAACGGACACAAAAA
TTAACATCTAAAATGGGACACTTTTACAATCAGCTGTAAAGTGCTGTTCC
TAAAGCTACAGGTTGGGTTTTTTGCTTAAATTCACAAGAGGAAAGGTTGA
ATTTTATGTTTCAAAATTAATTTTGAAAAAAAAATGTCAAAGTAAGAAAA
TATGACAAAAATTGGGTAAAAAATGCTGTGACTAACGGACATTTAAAAAC
GTGACTAACGGACAAAATGGTTTTTTAATGATTCTGACGAGGCAATCCAA
CCATTCCTATATTTGGTGCTTTTGGAGTGAAATGTTATATCAATAGAATG
ACAAAAGCCTGAAAGAATAGAAGAATTCTTATTTTTCTCTGTGTGGTACC
ATTCCTATCAAGTTCATAGATCTCGAAAATTTGAAAATTTTGAAATATAA
AGATCTGTTGAGTTTTTATGGGTGTTTTTTGCACTGCATTGTTTCTTTGT
TGAATCAGGACAAAGACAGACAAATTGGGTAAGGGTATTTTATTTATTTA
CTTGTGAAAAGGATTATTCTCCCTATTATGACAACTAGTCCGTTAGTCAC
GAAAAAATAAAATGCACACACAAAGAAAGGATTGACTATTTAACATATAT
CTATGGGGTGAAATGGGTAAATATAGTCAAAATAGCTTTAATAAGAACAA
AATACATGGTTTTTTAAGCGAGTGCCGTCTATTATATTCTCCGAACTCTG
AATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNTATTTGTTAATCCCATTGGGAGATAGG
CGGTTAGGTGGCGGGCGTTCTCTAATTCTCCAATTGGCGTCTGGTCATTT
TGAATGAAAACAAAAAAGTTAAAAAGGACATGCTATCAGTGAAAGTTATT
GTGACATGTTATGACAGAAAGTATGACTGATAAACTTGGTGGAGTTATCA
AAACAAATTTTTAGTCTGAGCAGCCCTAAAAAAGGATTTCTACTAGGGTT
TCTAACAGTGTAGCAGGGGTTATCCAGGCAATTACAGTCAACTGCTCTAA
CTTTGGACTATCTGATAAAACATGGAACAGCAATTCGGCTACCATTTCAC
CTAACCTCCAAAGTAACCGATCAAAGACCGACCGTCAAAGAGATTTAACA
GTAAGTGGAAATACAGGCCAGATATCAACAATTTCATGTTTCGACCAATC
TTCCCAAGTTAGAGCTGTTGACGGTACAAGGGGTTGTTTGCAGTTATAAT
CTGTTTCAAAAGCATATGTGCTCTAAGATACAATGTATAGCAATGTGTGC
TCTAAGATATGTAGATTTGGATTTGAAACAATGCCTATATCATACCCTGT
TTCAGGTTTTCCAGGCTAATGTCTCTCCAAAACATGTTTTTTTTTTCAGN
ATACTCTGTTTCAGGTTTTCCAGGCTAATGTCTCTCCAAAACATGTTTTT
TTTCACATTAAAGATGTAGGAAATAGATGTTAGTTTATTTTGATTTTCTT
TCATCTCTTTATAAAGGAAAATTCTGATTGATACTGGTGAAGAGAACAAC
TTAGACTACATTTCCAATTTGAAAGATGCTTTGAAAAAGTTTCAATGTTC
CATTCAAGAAGTTATCCTAACACACTGGCACCATGACCATGTAGGTGGAC
TTGAAAACGTGATCAAACATAAACTGATACCAGGTTAGTGGAGTCTACTG
ACTGATCTTTTAACTACTTGGCTGGATAGTCTACCAATATGTTTAGATTA
TGTATGTTTAAAATTAGGCTTGAACATACCTATCAAATAGCAAAAAGATC
AGACTTATTAAAGGAACAGTTAGCTCTTTATGTTTTTTTTTTATTATCGC
AAGCCTCTTTCTGTGTAGCCAGTGTTTTTACCTAAAATGAAGACGTTTTG
ACGTTAGTGTTAGAAAGTTTTTGCGAATCAGGCAAATTGTAAAATTTTCC
CAAATTTACCAAAATTACTTCCCATCAAATTGAATTCTTTTGGTCATTCA
CTAAAGTTAATTTGCACCAAATTTAATTCCCCTTCAATACACGTATTTCC
TATTAGCAGATTCATGTAAAAAAGTCACGAAACAACGTAGTGTAGAGTAA
AGTTCTGATTGGCTGCATATTACACACATAAGCATACTTTTTTCAAAATG
TCCAAAGTATGAGGTAATCTTTGCATGTCTCAGCCAGCCCAGCCAAGTCT
CAGAGTTTTACTCGACGTTTTTTCGTGACTTTTTTATATTAATCTGCTAA
TAGGAAATACGTGTATTGGATGGGAATTAGATTTATAGTTCCATTATCAA
AGTGCCACAAACATCATAATCGTCTGTGATCGCCGATTTTTCCAGTCCCG
TACCGGTAGCTCTAGGCCAAGGAAGGCCACAACCCATGTGGCCCCCTTTT
TTACCTCGTCTGAATAAAAAGTCCAGATTCTTTTTTAGTTTTGCCACATA
TATCTGAAATCTGAAATAATAGCTTTTGATGGGTTAATATTGCGATTTGT
TATTTTCTATTAATTTCTCTTATTAGCTGATTCAAGTTTACTATCAAAGT
TCATAAGACCTGGATACACCGAGAAAATCCCCTTCGATGGAGAATATCTA
GAATACACGTATGTTAAGGATGGTCATATTTTCACCACAGATGGAGCGAC
TATTCGTGCAGTTTTTACACCAGGTCATACTTCAGACCATATGTCATTGT
TTCTTGAAGAAGAAAATGCGATTTTTTCTGGTGATTGTATTTTGGGTGAA
AGTACGGCAGTGAGTTATTGATTTGATGTAGTAAATTACAAAAAGTTCAT
GTAGACCCACCCCAACGTTTCATAGTCGTACATTATTTTTCAATGATACT
CTCGGCCTTTTCCAGATAAAAGTTTTAAGTGGGTGTTGCGGATATAGGAC
CTTCAGGGGAATGTTTATACATCAAAAGGGCTGGATATGCAGGGGTGCTA
GTCAAAAAACAAGATCATTATTAGTAAGCCTAAATATATAAGCAAGGGTC
AAGATTTAATAATTAACCCTATGAAATAACAAACTCTTGAGATTGTCCAT
AAACTGATATCCTCATCACCCTGAACATTTATTTTTTATCCGGAAAAGCC
CATTCACCCCTCCCTTTTTTCCATCTATTTATTATTCTTAAAGAAAGGGA
CAGTTTCACTTTTAATTTTAACTTATTCATACGTCTTATTAAACGTAACT
TAACTAACTAACTTTAGAACGCCATAACTTCCTATTATCATTTCAACGTT
AGTGGCTACACCAGTAACAAACCTTTAACATTAAGACATTTTTTCTCATT
CTCCTTGTTACAGATATTTTCTGACCTTCACACTTACATGAATTCGCTGG
AACGATTAAGAGCGTTGAATCCTGGTGTCATTTACCCAGCACATGGTTCC
CTCATCAATGATGGGCATACCAAAATTGTAGACTATATTAACCACAGGAA
CGCCCGAGAAAAACAAGTGAGCATTTCCCTAGTGTGTTTTATTAACCGCT
ATAGATACTTTCCCAATAAGAAACTTTTGCGTCATACACGTTTTTTATAA
GAACATTCAAACTTTTGGAAGCCTTCCGTTTTAACTTTTAGATTTAAGCC
TAAAAATGATCTTAAATGATTGCTCCATTTTGTGAGTATTTTTATCCGCA
AAGCTTTAAAATGTTCTTAACTTGTTCCGAAAATTTTAGCAATGGAAGCC
TATTCTTCTTAGAAAAACCTTTAGGATTAGTGTAAACCTAGATTCTTTTT
GATTGGAAGATGAAACTTGTGGCATATGCCGACATCTGGCAAATAGGTCG
AACCTTAAAAAATACGAACGGCAGTTAAGGGGTTAAAGTTACACTCTACT
TTTAGATCTATGATGTTTTGCTGGAACACAGTGATTCTTCGCTCACATCC
CTCGATATTGTCAAGCAAGTTTACCTAGTAAGTGAACTTTCAGTTGTTAC
CTTAATTTGTTTTAGTTTAGCTTTTCAGTTATATACTAATCTCCTAACAG
ATAATTCATTCTACACGTACCAAGCTTTGCTCTAAAGGGTTATAACGTGA
CGATCTGAATTGGTTATTCAGCGAAAACAATCAAAACTGCNGTTATTCAG
CGAAAACAAGCGTTGCTTTTTGCTTGAAAGTGAAAGTGAAAGTGTTTAGG
TTTTTAGGATTTCTTTTTGATTTTGGTGCGATTGTTTTGCTTTAGCCAAT
CACCGGCTCAAAAGCTCATTTAATATTCATCCGAAACCTGGATGAAAAAG
ATCAAAACGGTGTTTCAAGCTGGACAGATTCTCTTACGGAGCCATGTCCT
TTAGTGTGAATACGTGCCATGCGTGGAGTATCAGAATCTGCTCGGAGAAA
ATTTTGAATGAATAATAGTGGTTCATCGTATCAGACCCATTTAGAAGGCC
ATGTATCAGACCCATTACTTCATATCAATCAATCTACAATCTTCAATTCT
TATCCTGACTAAAGAAAAAGTCCGGTTCTCTTTTCTTTTTTCCACGAAAG
TGTTATCTCAATATAAAGGAGCTCGTTGTTAAAAAAAAAAGTAAACAAGA
CGATCCTTAAACCCGGCATGGTTCTAGGTTTACGAGATGACGGGTATGTC
CGTCAAAGCCAAAGTTTGAAAATCGACCCTTGGAGAGACTGATTTTCGAA
AATGTTGTCCATTTTTTGACGCTTTTGTCAACCCTTAATTTTAGTCCAAA
TTTCAAGAATTTGTGGCCGGGTAGCTCATTCGGTAGAGCTTTCGCCTTAC
AATCTAACGTTTGTGGGTTCGATCCCCGGTCACCGCCAACTCAGCGGATG
AGTAGCTTAGATTGGGTAATCTGATCTAGGCGGTAAGTTACTGGAAGCTG
GGAGTAGGTGTGGCGCTCCACCTCAGCATTCGATCTCCCAGGTCTAGCGC
AAATAGAAAAGGGGATAGACTCCCTCACTCCCGGCTCCACCGACAGCCAC
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TGATACCGGCTGCCATGAATAATGTGGAACTACATCTCAAGAAATTAGAA
AAAGAAGGGAAAATATCCCAAGTAAACGATGAAATGTGGACGAAGGCTAA
GCTGTAATAATAAAGGAGAAGATTTGGAATTATCCGGCGCCTTAACCTGA
TTTTTCGCTTGACTGGAACTAAAGTCGGAGAATTATTTTTCACTGGAAAC
CTGGATAGATGCTAGGAATTTCGATCCCGAAAAGTTACATTGCCATAAGA
TATTGGATGATGAGTACACTTTTTCAGCTGTTGATGATTTTTTCATCGAA
TTGATAGTAAGTGGGAGTTCAATTAAATGAACTGAAGTTAAATTGGATAT
ACTTCTTGGGTTACTTAAAAAGGATTATTTTCGCGGTTTCGTTTTCTCAA
GTTTTGGATGTGGTATGACATTTTCAGGTGCAGGCCTGTTTTCAAGCTTA
TTTGCTTCAAATCCACGGGAAATTTTTCTAAGAAAAAACCTAATTCGCAA
CATTTAAATCTACGATATATGGGAATATTTAGATTTTTTTGTAGATAGAT
AAATTTATAACAGAAATTTTATGATTTTTATAATTTTTAAAAGAAGAATT
TTCGAAACATTAAAACATGGAGGTGTTTTCTGTAATTGTTCTTATGTGCC
AAAAGTTTGCCATCAGCACCTCGAACAGCAGCC

Coding sequence (CDS) from alignment at scaffold_326:367944..385326-

>TCONS_00059359 ID=TCONS_00059359|Name=TCONS_00059359|organism=Clytia hemisphaerica|type=CDS|length=5616bp|location=Sequence derived from alignment at scaffold_326:367944..385326- (Clytia hemisphaerica)
GGCTTAGCGGAGCAACTGATACCGGCTGCCATGAATAATGTGGAACTACA
TCTCAAGAAATTAGAAAAAGAAGGGAAAATATCCCAAGTAAACGATGAAA
TGTGGACGAAGGCTAAGCTGTAAATCTATGATGTTTTGCTGGAACACAGT
GATTCTTCGCTCACATCCCTCGATATTGTCAAGCAAGTTTACCTAATATT
TTCTGACCTTCACACTTACATGAATTCGCTGGAACGATTAAGAGCGTTGA
ATCCTGGTGTCATTTACCCAGCACATGGTTCCCTCATCAATGATGGGCAT
ACCAAAATTGTAGACTATATTAACCACAGGAACGCCCGAGAAAAACAACT
GATTCAAGTTTACTATCAAAGTTCATAAGACCTGGATACACCGAGAAAAT
CCCCTTCGATGGAGAATATCTAGAATACACGTATGTTAAGGATGGTCATA
TTTTCACCACAGATGGAGCGACTATTCGTGCAGTTTTTACACCAGGTCAT
ACTTCAGACCATATGTCATTGTTTCTTGAAGAAGAAAATGCGATTTTTTC
TGGTGATTGTATTTTGGGTGAAAGTACGGCAGAAAATTCTGATTGATACT
GGTGAAGAGAACAACTTAGACTACATTTCCAATTTGAAAGATGCTTTGAA
AAAGTTTCAATGTTCCATTCAAGAAGTTATCCTAACACACTGGCACCATG
ACCATGTAGGTGGACTTGAAAACGTGATCAAACATAAACTGATACCAGAT
GTACATTTTTGTCGGTTCCGTAAAGTTTGTCAGTCAAACCAAAACAAAAA
AGATGGCGGCCAAAATGCTAGCGAAACTTCCAAAACTTGAACAACTTTCA
CCACTTGTGATACGAGTTTTAGGATGTAATCCTGGACATATGACATTGCA
GGGAACCAATACTTACCTAGTAGGCTCTGGAAAAAGGGCTTAGCGGAGCA
ACTGATACCGGCTGCCATGAATAATGTGGAACTACATCTCAAGAAATTAG
AAAAAGAAGGGAAAATATCCCAAGTAAACGATGAAATGTGGACGAAGGCT
AAGCTGTAAATCTATGATGTTTTGCTGGAACACAGTGATTCTTCGCTCAC
ATCCCTCGATATTGTCAAGCAAGTTTACCTAATATTTTCTGACCTTCACA
CTTACATGAATTCGCTGGAACGATTAAGAGCGTTGAATCCTGGTGTCATT
TACCCAGCACATGGTTCCCTCATCAATGATGGGCATACCAAAATTGTAGA
CTATATTAACCACAGGAACGCCCGAGAAAAACAACTGATTCAAGTTTACT
ATCAAAGTTCATAAGACCTGGATACACCGAGAAAATCCCCTTCGATGGAG
AATATCTAGAATACACGTATGTTAAGGATGGTCATATTTTCACCACAGAT
GGAGCGACTATTCGTGCAGTTTTTACACCAGGTCATACTTCAGACCATAT
GTCATTGTTTCTTGAAGAAGAAAATGCGATTTTTTCTGGTGATTGTATTT
TGGGTGAAAGTACGGCAGAAAATTCTGATTGATACTGGTGAAGAGAACAA
CTTAGACTACATTTCCAATTTGAAAGATGCTTTGAAAAAGTTTCAATGTT
CCATTCAAGAAGTTATCCTAACACACTGGCACCATGACCATGTAGGTGGA
CTTGAAAACGTGATCAAACATAAACTGATACCAGATGTACATTTTTGTCG
GTTCCGTAAAGTTTGTCAGTCAAACCAAAACAAAAAAGATGGCGGCCAAA
ATGCTAGCGAAACTTCCAAAACTTGAACAACTTTCACCACTTGTGATACG
AGTTTTAGGATGTAATCCTGGACATATGACATTGCAGGGAACCAATACTT
ACCTAGTAGGCTCTGGAAAAAGGGCTTAGCGGAGCAACTGATACCGGCTG
CCATGAATAATGTGGAACTACATCTCAAGAAATTAGAAAAAGAAGGGAAA
ATATCCCAAGTAAACGATGAAATGTGGACGAAGGCTAAGCTGTAAATCTA
TGATGTTTTGCTGGAACACAGTGATTCTTCGCTCACATCCCTCGATATTG
TCAAGCAAGTTTACCTAATATTTTCTGACCTTCACACTTACATGAATTCG
CTGGAACGATTAAGAGCGTTGAATCCTGGTGTCATTTACCCAGCACATGG
TTCCCTCATCAATGATGGGCATACCAAAATTGTAGACTATATTAACCACA
GGAACGCCCGAGAAAAACAACTGATTCAAGTTTACTATCAAAGTTCATAA
GACCTGGATACACCGAGAAAATCCCCTTCGATGGAGAATATCTAGAATAC
ACGTATGTTAAGGATGGTCATATTTTCACCACAGATGGAGCGACTATTCG
TGCAGTTTTTACACCAGGTCATACTTCAGACCATATGTCATTGTTTCTTG
AAGAAGAAAATGCGATTTTTTCTGGTGATTGTATTTTGGGTGAAAGTACG
GCAGAAAATTCTGATTGATACTGGTGAAGAGAACAACTTAGACTACATTT
CCAATTTGAAAGATGCTTTGAAAAAGTTTCAATGTTCCATTCAAGAAGTT
ATCCTAACACACTGGCACCATGACCATGTAGGTGGACTTGAAAACGTGAT
CAAACATAAACTGATACCAGATGTACATTTTTGTCGGTTCCGTAAAGTTT
GTCAGTCAAACCAAAACAAAAAAGATGGCGGCCAAAATGCTAGCGAAACT
TCCAAAACTTGAACAACTTTCACCACTTGTGATACGAGTTTTAGGATGTA
ATCCTGGACATATGACATTGCAGGGAACCAATACTTACCTAGTAGGCTCT
GGAAAAAGGGCTTAGCGGAGCAACTGATACCGGCTGCCATGAATAATGTG
GAACTACATCTCAAGAAATTAGAAAAAGAAGGGAAAATATCCCAAGTAAA
CGATGAAATGTGGACGAAGGCTAAGCTGTAAATCTATGATGTTTTGCTGG
AACACAGTGATTCTTCGCTCACATCCCTCGATATTGTCAAGCAAGTTTAC
CTAATATTTTCTGACCTTCACACTTACATGAATTCGCTGGAACGATTAAG
AGCGTTGAATCCTGGTGTCATTTACCCAGCACATGGTTCCCTCATCAATG
ATGGGCATACCAAAATTGTAGACTATATTAACCACAGGAACGCCCGAGAA
AAACAACTGATTCAAGTTTACTATCAAAGTTCATAAGACCTGGATACACC
GAGAAAATCCCCTTCGATGGAGAATATCTAGAATACACGTATGTTAAGGA
TGGTCATATTTTCACCACAGATGGAGCGACTATTCGTGCAGTTTTTACAC
CAGGTCATACTTCAGACCATATGTCATTGTTTCTTGAAGAAGAAAATGCG
ATTTTTTCTGGTGATTGTATTTTGGGTGAAAGTACGGCAGAAAATTCTGA
TTGATACTGGTGAAGAGAACAACTTAGACTACATTTCCAATTTGAAAGAT
GCTTTGAAAAAGTTTCAATGTTCCATTCAAGAAGTTATCCTAACACACTG
GCACCATGACCATGTAGGTGGACTTGAAAACGTGATCAAACATAAACTGA
TACCAGATGTACATTTTTGTCGGTTCCGTAAAGTTTGTCAGTCAAACCAA
AACAAAAAAGATGGCGGCCAAAATGCTAGCGAAACTTCCAAAACTTGAAC
AACTTTCACCACTTGTGATACGAGTTTTAGGATGTAATCCTGGACATATG
ACATTGCAGGGAACCAATACTTACCTAGTAGGCTCTGGAAAAAGGGCTTA
GCGGAGCAACTGATACCGGCTGCCATGAATAATGTGGAACTACATCTCAA
GAAATTAGAAAAAGAAGGGAAAATATCCCAAGTAAACGATGAAATGTGGA
CGAAGGCTAAGCTGTAAATCTATGATGTTTTGCTGGAACACAGTGATTCT
TCGCTCACATCCCTCGATATTGTCAAGCAAGTTTACCTAATATTTTCTGA
CCTTCACACTTACATGAATTCGCTGGAACGATTAAGAGCGTTGAATCCTG
GTGTCATTTACCCAGCACATGGTTCCCTCATCAATGATGGGCATACCAAA
ATTGTAGACTATATTAACCACAGGAACGCCCGAGAAAAACAACTGATTCA
AGTTTACTATCAAAGTTCATAAGACCTGGATACACCGAGAAAATCCCCTT
CGATGGAGAATATCTAGAATACACGTATGTTAAGGATGGTCATATTTTCA
CCACAGATGGAGCGACTATTCGTGCAGTTTTTACACCAGGTCATACTTCA
GACCATATGTCATTGTTTCTTGAAGAAGAAAATGCGATTTTTTCTGGTGA
TTGTATTTTGGGTGAAAGTACGGCAGAAAATTCTGATTGATACTGGTGAA
GAGAACAACTTAGACTACATTTCCAATTTGAAAGATGCTTTGAAAAAGTT
TCAATGTTCCATTCAAGAAGTTATCCTAACACACTGGCACCATGACCATG
TAGGTGGACTTGAAAACGTGATCAAACATAAACTGATACCAGATGTACAT
TTTTGTCGGTTCCGTAAAGTTTGTCAGTCAAACCAAAACAAAAAAGATGG
CGGCCAAAATGCTAGCGAAACTTCCAAAACTTGAACAACTTTCACCACTT
GTGATACGAGTTTTAGGATGTAATCCTGGACATATGACATTGCAGGGAAC
CAATACTTACCTAGTAGGCTCTGGAAAAAGGGCTTAGCGGAGCAACTGAT
ACCGGCTGCCATGAATAATGTGGAACTACATCTCAAGAAATTAGAAAAAG
AAGGGAAAATATCCCAAGTAAACGATGAAATGTGGACGAAGGCTAAGCTG
TAAATCTATGATGTTTTGCTGGAACACAGTGATTCTTCGCTCACATCCCT
CGATATTGTCAAGCAAGTTTACCTAATATTTTCTGACCTTCACACTTACA
TGAATTCGCTGGAACGATTAAGAGCGTTGAATCCTGGTGTCATTTACCCA
GCACATGGTTCCCTCATCAATGATGGGCATACCAAAATTGTAGACTATAT
TAACCACAGGAACGCCCGAGAAAAACAACTGATTCAAGTTTACTATCAAA
GTTCATAAGACCTGGATACACCGAGAAAATCCCCTTCGATGGAGAATATC
TAGAATACACGTATGTTAAGGATGGTCATATTTTCACCACAGATGGAGCG
ACTATTCGTGCAGTTTTTACACCAGGTCATACTTCAGACCATATGTCATT
GTTTCTTGAAGAAGAAAATGCGATTTTTTCTGGTGATTGTATTTTGGGTG
AAAGTACGGCAGAAAATTCTGATTGATACTGGTGAAGAGAACAACTTAGA
CTACATTTCCAATTTGAAAGATGCTTTGAAAAAGTTTCAATGTTCCATTC
AAGAAGTTATCCTAACACACTGGCACCATGACCATGTAGGTGGACTTGAA
AACGTGATCAAACATAAACTGATACCAGATGTACATTTTTGTCGGTTCCG
TAAAGTTTGTCAGTCAAACCAAAACAAAAAAGATGGCGGCCAAAATGCTA
GCGAAACTTCCAAAACTTGAACAACTTTCACCACTTGTGATACGAGTTTT
AGGATGTAATCCTGGACATATGACATTGCAGGGAACCAATACTTACCTAG
TAGGCTCTGGAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037367XLOC_037367Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059359-proteinTCONS_00059359-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059359-exon-scaffold_326-1575043694:384989..385326TCONS_00059359-exon-scaffold_326-1575043694:384989..385326Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1575043694:375494..375660TCONS_00059359-exon-scaffold_326-1575043694:375494..375660Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1575043694:374418..374650TCONS_00059359-exon-scaffold_326-1575043694:374418..374650Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1575043694:373711..373863TCONS_00059359-exon-scaffold_326-1575043694:373711..373863Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1575043694:373250..373321TCONS_00059359-exon-scaffold_326-1575043694:373250..373321Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1575043694:367944..368642TCONS_00059359-exon-scaffold_326-1575043694:367944..368642Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1510915933:384989..385326TCONS_00059359-exon-scaffold_326-1510915933:384989..385326Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1510915933:375494..375660TCONS_00059359-exon-scaffold_326-1510915933:375494..375660Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1510915933:374418..374650TCONS_00059359-exon-scaffold_326-1510915933:374418..374650Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1510915933:373711..373863TCONS_00059359-exon-scaffold_326-1510915933:373711..373863Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1510915933:373250..373321TCONS_00059359-exon-scaffold_326-1510915933:373250..373321Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1510915933:367944..368642TCONS_00059359-exon-scaffold_326-1510915933:367944..368642Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1491911889:384989..385326TCONS_00059359-exon-scaffold_326-1491911889:384989..385326Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1491911889:375494..375660TCONS_00059359-exon-scaffold_326-1491911889:375494..375660Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1491911889:374418..374650TCONS_00059359-exon-scaffold_326-1491911889:374418..374650Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1491911889:373711..373863TCONS_00059359-exon-scaffold_326-1491911889:373711..373863Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1491911889:373250..373321TCONS_00059359-exon-scaffold_326-1491911889:373250..373321Clytia hemisphaericaexon
TCONS_00059359-exon-scaffold_326-1491911889:367944..368642TCONS_00059359-exon-scaffold_326-1491911889:367944..368642Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_326supercontigscaffold_326:367944..385326 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.99075	5.53697	3.50742	2.14184	17.3637	14.6483	18.3122	16.7207	12.0892	10.9093	10.951	11.5902	11.4022	14.3674	12.4265	15.7716	10.4044	11.7949	11.035	5.40866	9.76291	12.7038	16.629	13.0147	17.7415	15.4224	9.3892	9.92753	14.3469	20.424
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001279Metallo-B-lactamas
IPR011991WHTH_DNA-bd_dom
Blast
[Close]
BLAST of TCONS_00059359 vs. Swiss-Prot (Human)
Match: LACB2 (Endoribonuclease LACTB2 OS=Homo sapiens GN=LACTB2 PE=1 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 6.928e-83
Identity = 131/248 (52.82%), Postives = 174/248 (70.16%), Query Frame = 1 
Query:  241 EQLSPLVIRVLGCNPGHMTLQGTNTYLVGSGKRKILIDTGEENNLDYISNLKDALKKFQCSIQEVILTHWHHDHVGGLENVIKHKLIPADSS-LLSKFIRPGYTEKIPFDGEYLEYTYVKDGHIFTTDGATIRAVFTPGHTSDHMSLFLEEENAIFSGDCILGESTAIFSDLHTYMNSLERLRALNPGVIYPAHGSLINDGHTKIVDYINHRNAREKQIYDVLLEHSDSSLTSLDIVKQVYLGLAEQL 981
            E+LS  V+RVLGCNPG MTLQGTNTYLVG+G R+ILIDTGE    +YIS LK AL +F  +IQE+++THWH DH GG+ ++ K   I  D++  + K  R    E+I  +GE  +Y Y+KDG +  T+GAT+R ++TPGHT DHM+L LEEENAIFSGDCILGE T +F DL+ YMNSL+ L  +   +IYP HG +I++   KI  YI+HRN RE+QI  +  E+ + S T +++VK +Y    E L
Sbjct:    9 ERLSNRVVRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKS--INNDTTYCIKKLPRNPQREEIIGNGEQ-QYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDYMNSLKELLKIKADIIYPGHGPVIHNAEAKIQQYISHRNIREQQILTLFRENFEKSFTVMELVKIIYKNTPENL 253
The following BLAST results are available for this feature:
BLAST of TCONS_00059359 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LACB26.928e-8352.82Endoribonuclease LACTB2 OS=Homo sapiens GN=LACTB2 ... [more]
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