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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059383 ID=TCONS_00059383|Name=TCONS_00059383|organism=Clytia hemisphaerica|type=transcript|length=1028bp
TAAAAGTGTGATTTCCGCTGATTTCAATTCGGGCGATATAATGTTGCCAC
CACGTGATTCTTTGAACAAATTTAAGAATTCTTTATGTTCGTGATTGTGA
TCATCAATATGAAGAACGTTGCCATCTTTGATCATATTTGATGGTAGTTT
GAGAAACGCTCCGACGAATTCTTTGAATAAAGACATCTTAGTTTCCATCT
TAGTTTTGGTATGGAATAATTTTGTAAACAGCGGTAATCTTGATTTGCAT
ATCTCGTCCAATTTGTTATAAAAAGTGACAAATAGTTCATTGTCATTCGT
TTCGAGCATACGTTGGACTCCGACCATGGTTGGCTTGCAACTTGATAATT
CTCGGTTCGATTTAAATGGTTCGATATCCTTTGTTACACATAAGTGTAAC
GCGGTAAAGAATTCATGGAGAACCAAGTGCCTGAACTGGTACGTCGCTTT
TTGTTCATTCCCGGCACGGTATTTGGTAATGAATCCGGTTTCTTCAATCG
GGAAACGGCATTTCAAAGATCGGATATCGGATTCGTTAAAAACGACTTTG
TTTTCCATGTATGTGGTGACGGATAGCTGCATGATGGAATACAACATTTC
TACCACTTTTCGATCTTCTATGATGGACATGAGATTTGGGTATTGATTCG
GTTTACTTTTGAAATGATTCCTGATGAAAATCAAAGACGAATAGAAGTAT
AGTTCTGTTTGTGTGTTTATAGAGTTTGTCAACAGGCTGTCTTTGTAAGC
ACTGCAAATAACAAAGAGAAAGACTGGCACACGGGCCATTAGACGTAGAT
TGTATGATTGGGTGATTAAATCTTTGACAGTTGTTGCTTTCTCCATATTT
TCACCGAAAAAAATGTCGATGTATTTAACGATGTTTTCGTCATCAAATCC
GCACACTTCAATAGTTTTTCGTTTCGAGTTTGTTGGTAGTTTGGTTTTGA
CATGCTCGATAGCCTTGGGTCTGCCGCATGCTAACACTTTGTGGTTTTTG
AGCCAATCTCCTTTTGGGTCGAGTAAAT Run BLAST on NCBI transcript from alignment at scaffold_326:429141..430168 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059383 ID=TCONS_00059383|Name=TCONS_00059383|organism=Clytia hemisphaerica|type=transcript|length=1028bp|location=Sequence derived from alignment at scaffold_326:429141..430168 (Clytia hemisphaerica)
ATTTACTCGACCCAAAAGGAGATTGGCTCAAAAACCACAAAGTGTTAGCA
TGCGGCAGACCCAAGGCTATCGAGCATGTCAAAACCAAACTACCAACAAA
CTCGAAACGAAAAACTATTGAAGTGTGCGGATTTGATGACGAAAACATCG
TTAAATACATCGACATTTTTTTCGGTGAAAATATGGAGAAAGCAACAACT
GTCAAAGATTTAATCACCCAATCATACAATCTACGTCTAATGGCCCGTGT
GCCAGTCTTTCTCTTTGTTATTTGCAGTGCTTACAAAGACAGCCTGTTGA
CAAACTCTATAAACACACAAACAGAACTATACTTCTATTCGTCTTTGATT
TTCATCAGGAATCATTTCAAAAGTAAACCGAATCAATACCCAAATCTCAT
GTCCATCATAGAAGATCGAAAAGTGGTAGAAATGTTGTATTCCATCATGC
AGCTATCCGTCACCACATACATGGAAAACAAAGTCGTTTTTAACGAATCC
GATATCCGATCTTTGAAATGCCGTTTCCCGATTGAAGAAACCGGATTCAT
TACCAAATACCGTGCCGGGAATGAACAAAAAGCGACGTACCAGTTCAGGC
ACTTGGTTCTCCATGAATTCTTTACCGCGTTACACTTATGTGTAACAAAG
GATATCGAACCATTTAAATCGAACCGAGAATTATCAAGTTGCAAGCCAAC
CATGGTCGGAGTCCAACGTATGCTCGAAACGAATGACAATGAACTATTTG
TCACTTTTTATAACAAATTGGACGAGATATGCAAATCAAGATTACCGCTG
TTTACAAAATTATTCCATACCAAAACTAAGATGGAAACTAAGATGTCTTT
ATTCAAAGAATTCGTCGGAGCGTTTCTCAAACTACCATCAAATATGATCA
AAGATGGCAACGTTCTTCATATTGATGATCACAATCACGAACATAAAGAA
TTCTTAAATTTGTTCAAAGAATCACGTGGTGGCAACATTATATCGCCCGA
ATTGAAATCAGCGGAAATCACACTTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059383-exon-scaffold_326-1491911889:429141..430168 | TCONS_00059383-exon-scaffold_326-1491911889:429141..430168 | Clytia hemisphaerica | exon |
| TCONS_00059383-exon-scaffold_326-1510915933:429141..430168 | TCONS_00059383-exon-scaffold_326-1510915933:429141..430168 | Clytia hemisphaerica | exon |
| TCONS_00059383-exon-scaffold_326-1575043694:429141..430168 | TCONS_00059383-exon-scaffold_326-1575043694:429141..430168 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_326 | supercontig | scaffold_326:429141..430168 . |
Blast
The following BLAST results are available for this feature:
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