TCONS_00059512 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059512
Unique NameTCONS_00059512
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3375

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059512 ID=TCONS_00059512|Name=TCONS_00059512|organism=Clytia hemisphaerica|type=transcript|length=3375bp
ANTAGACGAAAATGAAAACCCTCAAACTGCTTACCCTGaAATATCTGAAT
CAACAACATGGGGTATCTTAGGAGCACACTCTACTATCAAAGAGAAAATT
AATAGCCTGAGTGCTGTTGTTGGTGAGGATTCAGAGAATTGGGATGTTAA
CGAACAAGACTTAAATGAGAAAGGTAATAAAAAACATGCTACAAAACGCT
ACTATCTTGAAGATGAATTACCAAATATTATCTGCTTCAATTGTGGTTTG
AAAGGTCACATTGGTAGAGACTGTACTCAAGAAAGGAAACTGCCGACTTG
CAGTCTGTGTGGAACCGATGGTCATGTGCGCAGACACTGTCCCAACGAGT
TTTGTTTCAATTGTATGGAAACTGGACACAGAGCAAGAGATTGTacggag
gaaagaaaaaaaccACGTCATTTGCTGCGCTGTAAACGTTGCAGGAATGT
TGGACATTTGAAGCAGGATTGTCCAGAGTATTGGAGACAGTATCATGTAA
CTATTGAATCTGGACCGATCATCATGTTATCCatatcatcaaaaagcaaa
gagAAATCAAACAAAGAGAATCGATACTGTTTTAACTGTGCGTCAACCAA
ACATTTTGGAGAGGAATGTAAATACGATCGGTTGAATAAGGGGCCAGTTT
GCGGACAGTTTGTGGTCAATTACGATCCTTGTACAACTGAAGGCCACGAA
GTCAGTAAGAGAGACAAATCGAAACGCGACAAAGAACGTAAAGAAAAAGA
ATCGGGTGAAAAACGTAAAGAATCGAGAGACTTGAGAGAATCGCGTAGGA
AAAATCGTGATAGTTCGCCAATCGAGTCGCCCCGGAAAAGCAgtagagaa
aaaattaaagatcGCGATTCTAAAGACTCCCCTAGAGAGAAAAGCACCAG
GGACTCTAACGAATCTCCGAAGGATTCACTGAGATCACGTGACAGTAAAA
AGGAAAAGTCAcgtgatgaaaaagaaaagagcAGGACTGAGTCTCCCTCT
GATTTGTCAATGGAGCGagataagaaaagaaaaaagaagaaagaacgcGA
AGAATCGCCTATCACTTTGACTTCTAGTAGTAAAAATCTCGataaggacg
aaaagaagaaagattcaAGCGAAAAGGAGAAAGATTCTAAGAAACGAAAA
CGAGATtctgagaaagaagaaaaaacgaaATCGACTTCAAAAGATGAAGA
AATCGAACCTTCGAAAAAGAAGAGTAAAAGTTCAAAAGATAAAGAGAGCG
AAAAGAAAGATGAAAAGCAACGATCGTATGAAAATATACGGCGAAACATG
TGGATTAGTGACGACGACAATATCTCGATAGACAGAACAGAATCGTCGGA
AGCgccgaaaaagttttcattAGCCGACcatctgaaaattggatttggGT
TAACTTCGAAAAAACGTAAAGGTGAAAGCGATGTTGACAAATCTAATAAG
AAACGGAAACGAGAGGAACCGAGTGGGAGCGAAAAATCCAAcgacaaaaa
acgaaaaacgaaaacaaaGGACGAAAATGAACAAAGTAGTTCACAATCAA
GTAATCCTGATAACGATATAGATAATCAAAGTAAAACGAAAGTTAAACGA
GAAAAAACGATTAGCgacgaaaaagtgaaaattgataaaacatTAATTAC
TGAGAAAACTGACCAGCCACAGCAAAGTAAAACGGCAGCAAGTCGAATAA
GCAATAGCACAAGCACCATATCTTCTAGTAAGGCTAAGAATAATAAGACT
TCTGAATGGATGGAAAAGTGGGAGGATTATACAAACGATGCTGTCAATGA
GGACGACGAAAAGTACGAGTTACTTCAACGAGTCGATTCGTCGGAAGTCA
CCGAAATTGTCATCGAGGATGATGAAAATTCGAATGATAGTGTAGCGACT
CTTGATTTCGACGCACCGACAACGAGGCCATTGGCGCCCAACGTTATACT
TATTGACGATGATGAAGATGAGACTTCACATACCACTCAAGAACAAGCAT
CTCCACTGCATTCACCAGAACGCACCAAAGTGAAGCCAAACAAAACTATC
AGTGAAAGCCCGAGATccaaaaagtacaaaatgaaCGTTGAAGCATTGAA
CAATCTGAAGACGATACTGGATAGTGACAGCGATAGTGATTCTGACGACG
AATGGGCCGACGATGACGGACAACAACAATCGTCATCTACTCTCAACCCT
CAACCCAATTTTCATGATGATGATAGTGACGTATCAGTGACCGAAGTTGT
CTCTTTAGACGGTGGTGATACGCATGCGCGAGATGTTGAAGAGCGAACGA
CATTAGACTACAACCAAACGCCCCGCGTTTCGCCCACTACACCGCCCACA
TTCAATAATATCGTTATCGGTGacgatgatgaagatgaagatgaagttAA
TACAACAAACAGGGACCTGACATACTACGATCCACGTGCTGTATACCAAG
AACATCTCGTTATCTATAATCTCGTAAATGCAACGCAAACCGTATCCAAG
CTGAAGGAAATCGACCCTGTAATCCTCCCGGACACTAGCCCGTTCTCCAA
AACTGGAAAAAGGTTGGATTCAAGAAAGCAATCTAGTGCTCCCAAAGAAC
CTTTCTTTATTCCGTGGATAAATCGTGAAGTAATCGAAGGGCGTATGAAG
GGTGGACTTAAGATGTACGCCAACAATGACTTGAAACCATTTGCTAAAAG
AATAACTATCAGGAAATGGAAGGCGGAAGCAGAAAACTATAAAGAGAAAT
TAATCGAGGAAGAGGCACTACGTCGTGGAATGTCAAAGAAAGAGATGAAT
ACACTTTCAAACCGTTTTTTCAACGAACTGGCGGTACAACATCTTCGAGA
GAACGCCCACCTCATCAATAACGAAGCTGTTCAACATAGGCACAAAAAGG
TCGATTGGCGACGTGCTAAAACGAAACGGAAATTTGCgcgaaagaaattg
aaaaagaaagctGTTACGGAACACTTTGATTTGCAAAAGAAGGATAAATG
AAAAGGATTAGCCATGAAATAACTTATTTCGAGAGTAAATCCTTAACTTG
ATGCCATGTTAGGAAGGTTGGATGCACCACAGTGCTCGAAAAtagttttg
aagaaaatttttcatcgCTCACTTGTGAAATCGTTGGTTTTNCCCCGATC
CATCCACAGGGCTCGAAAAtagttttgaagaaaattattcATCGCTCACT
TGTGAAATCGTTGGTTTTCTCTTAGTTTTTGCGTACCGACCCGACcttgg
ataaatatttttatactttttgatgTTGATTTGAACTGTGTACTTAGTTT
TGTAAAATTTACGCCACGAGTTTTCTTGTCTTTTCTTTAGTTTTACACTA
CTTTAATAGGATagattttggcggg
Run BLAST on NCBI

transcript from alignment at scaffold_329:304527..317687+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059512 ID=TCONS_00059512|Name=TCONS_00059512|organism=Clytia hemisphaerica|type=transcript|length=13161bp|location=Sequence derived from alignment at scaffold_329:304527..317687+ (Clytia hemisphaerica)
ANTAGACGAAAATGAAAACCCTCAAACTGCTTACCCTGGTATTTATATGG
ACTTTTTTTAACTATATTCTATCATTGTGAAGTAAAGAAGTGCTGCTTCA
GGTACTACTTAGTGCTAAATGTACTTTCTTATGTTTGAAAATAGAGCTTA
GACAACCCCACTTTTGTTCACTACGTAATTTATCCGCACCTCCAAAGAAT
ATTGAATTAGCTAAATCAAAGAAGCAAAATAACCCCCACATTTTTACTTT
CCTTCAAAAGTTTCTATGACATTATTATATACATATTATTTTTATTGACT
ATTAACTAGCTAATTTTGACCAGCCACCAGGCATAGGTCCAGACCCCCTG
GCAAAGTTGATTTGAGTCATTTCAAGTTGAGTTTGCAGGAGAACATCAAC
TTATTTTGTCTATcatttattctcaacttcagttgagttagaatctgaga
atgtgtctGTCTGTNcttaaattttttttgttttaataaaaaaaggaaat
acaaaagaaatgagTGAAGATGAAGATTATGAAGAGGATATTTATACTGA
AGAAGAACTTGAGGAACAGTGAGTTTTTTGNgaatctgagaatgtgtctG
TCTgcgtgtctgtctgtgtgtgtgtatgtcccaaaactttggggcagcct
ggagaattgttcgatttggctgaaatttggcacacttgttccttgggtaa
atatctgggggtgtttttttcatttttcaaaatttttgatttttggggcc
ttgggacgagttttcgcgaaacgaggctaaaactttggggcagcctggag
acttcaaaaattgttcgatttggctgaaattttgcacacttgttccttgg
gtgaatatctgggttttcttttttcatttttcaaaaattttgatttttgg
ggcctggggacgagtttttcgcaaaaacgaggctaaaattttggggcagc
ctggagacttcaaaaattgttcgatctggctgaaattttgcacacttgtt
ccttgggtgaatatctggtggtgtttttttttcattttttgaaaattttg
atatttggggcctggggatgagtttttcgccaaaacgaggctaaaacttt
gtggcagcctggagactttaaaaattgttcgattcggctaaaattttgca
cacttgttccttgggtgaatatctgggggtgctttttgcattttttaaaa
atttagatttttggggcttggggacgagttttttgccaaaacgaggctaa
agctttgaagtagcctacaggcctccaaaatggtcgaatttggttgaaat
ttggcacacttgttcattgggtaaatatctgggggtctacaattgggcct
atgaataatttgaagccactgaagttgagcccagtgcgttgcgcacgttc
gactatcttgaaatatctttttgtttttaatagaAATATCTGAATCAACA
ACATGGGGTATCTTAGGAGCACACTCTACTATCAAAGAGAAAATTAATAG
CCTGAGTGCTGTTGTTGGTGAGACTCTTTTTCTTACCGTGGTTTACTTGT
TTTTTGATTGTTCTGAATAGGGATATACTAATAATTGAATGGAACAAAAC
GTAGTAAAATCTAGTTCTCTTGTATTCTCTAAATAGTCAGAATAGCCAGA
TTCAGAAATCTTTTAGtaaataaaatgacattttccCTCTTTTAGGTGAG
GATTCAGAGAATTGGGATGTTAACGAACAAGACTTAAATGTAACTATTCT
GGCCTTTATATAGGTTTCCTGTATCCTGAGAAAATCTATAATGACAAAAT
TTGATgtcataggcaaaactgcaagggcaaAAAGGGTTTggaaaatatct
aaatttcaataagtcaaaaaaaaactaaaatggtaAATAGACCAGCCgcc
gaggtagtgaattgtgtcaaaaatggtatggtttatcagctttcgatgtc
tagatctcaagatattttggtttaaatattgaaaattattgatatttttt
gctgagtcagcagtttttcagcatatttacccactataaaaatgaaatat
ctcaagatcgGAACATCGAAAGTTagcaaaccataccattttcgaatact
actaattcagggctatccagctgtggaaatgattttttctgaaaatgctc
ccagaaaaatgctgacgtcatcagaaaacacccaaaacgtcgatttttcg
ccttaaaaatgccatttctcagCACCAGGTGgtagaaacttaacaaataa
ccccaatttctttatctacttttcacgctgaatttgattttcagacttcg
aaaaaaccatTAGTAAAGGGGACCCTTGAGTTCTACCGATTAACTAGAAA
Tcaattcactcgaaaactgcaggagattcgaagggcaaatttttttgtca
tttttacataatatcaaaaatttgccttgacctaaggggtgccctacgaa
aaccatttttaaggccttttctgaatctGGGACGCTGGTCTAAAATATTG
GAAGTGGCTGGAAGAGCACGAAATTCTGAGTAAAAGATCTATTACAACAC
CCTTCTTTACTCAAACATGCACACAGAAATTCAGCGCTGTTTGAAGCTAA
AAACCTTTAGTATGATGTAAATAAAGATTTAAAATGTCAAATTGGAGCTG
ATGACAGGGAGTTGTTATTAAAAGGGCTgaattaattcatgatatgcacc
actggatagtcttctgagaactttcaaaattttccacacaatacgtcact
taaaaaatagaaaaattgacataatgggtggaaatttttgacaattCTTG
GAAGGCTCTCCATATCGTGAATTAAAATTTCGAGCTTTGACTCATTTTAG
GAGAAAGGTAATAAAAAACATGCTACAAAACGCTACTATCTTGAAGATGA
ATTACCAAATATTATCTGCTTCAATTGTGGTTTGAAAGGTCACATTGGTA
GAGACTGTACTCAAGAAAGGGTAATGAGATAATACTTAATCTTGTATTTA
AATGTGTGTTGTTTTAAATTCATGATATGGACCACTTATTGCAATGACCT
CACAAAGTTATGCAACCTTTCTGGGTTATTTTGTAATGATGTGTCATAGc
ttgtttgatttttcaaaagtagtatttttgatcaattttcaaaaaagatc
aAAAGTTCCAAATATTGTTGAATTTTTAGAATTTGGCTATAATTATTCCA
AATTTTGCCTTGGGAAAGATACTGAGGGGCCTAGAGGCTAGATGCATTTT
GTGAAAAAGCAAGATATGcattatttcatttttgttttcaaaagagTTGT
TCAAATTTTTACACTTTAAATTTACAGAAACTGCCGACTTGCAGTCTGTG
TGGAACCGATGGTCATGTGCGCAGACACTGTCCCAACGAGTTTTGTTTCA
ATTGTATGGAAACTGGACACAGAGCAAGAGTAtgtcacatttttttatat
accCTACATTCCAATTTGTTACATTTTAGACCTTGATAAAATAATCCTTT
CTGCttttcattttcgcatttacCAAATTACTTCGAATGaaggggacaag
ctggagtttttacaagctcttatttgatttggtcgGTCGTTANatttatt
cccccaaatgtgtgctatttcaggggacaagctggagtttttacaagctc
ttatttgatttggttggtcgttaagatgtaataaaagaatcttattactt
tttctaaagaacgcgtcatccatatcactttaaatgaccaattagtgaag
tatcttgtaaaaactccaaggcatctcgaATGAAGGCccctttttaaaga
aaaattcccTTCAAATTAAGCCCActttcgaataaacgcctcccCTTTAC
TAGTAGGGgaatttatttgaaacaagtagctGTAAGTGAAGTTGTATAAA
GGAAAACTAATATTTGTTACTTATTATATTACCCAATTTCAGCCTACTTA
GTGTTATTAATTAAAATCTCAATTTCTTTACCTAATTTTTTATTCACAGG
ATTGTacggaggaaagaaaaaaaccACGTCATTTGCTGCGCTGTAAACGT
TGCAGGAATGTTGGACATTTGAAGCAGGTAGATTATCACTTTCTCAGTCG
ACAATGTGATTGTTTCACATTAAGATAAGTATGTATGGTGGGAGTAAATC
TGATGTTTCTTCTTGGTACCCATACGCAGAAATGAATTTGTCGATTCCTT
tcctgttttttcttttatctcaTGGAGGGTGGAgctgttttgaaatttca
tgaAGGAATAACCTTATccttgttttttggacctacctccgggtgccccg
gtggaggttctataaattaacccatgtccgttcgtccgttcgtctgttcg
tctgttcgtctgttcgtccgttcgttcgtccgtctgttatcagcttttct
caggattggctcattagttttttctaattttttgcacaatgatgcaaaat
ggcaatgcctagaacgtgacggagcccgatttttaagaaaaaatttattt
gggcaaatttgggccaaaaactacctaaaaatagggttttttggactttg
tgcaaaatcctgtcattacttttttctgattttttgtacaaagatggagg
gcaatattctctaaagaatggctgaagtggtttttcccggaaaattctta
ttcgccttaaaaaacggatttttgtattttgGGGGAAATTCCCTTTAACC
AAATAAGAAAATATAGCTTTTAACAATGTTGACTCattatttttttctga
ttttttgcacaatgatgcaaaatggcaatgcctaaaatgtgtcggagcct
gattttcgaaaaaaaatatatttgggtaaatttgggccaaaaactgccta
aaaatagggttttttggacttttgcaaaatcttgtcattacttttttctg
attttttgtacaaggatggagggcaagattctctaaagaatggctgaagt
ggtttttcccggaaaattctttttcgctctaaaaacggattttcgttttt
tggggaaattccctttagccaaataagaaaatatagcttttctcaggatt
ggctcattagtttttttctgattttttgcacaatgatgcaaaatggcaat
gcccagaacgtgacggagccagaactttgaaaaaaaatatatttgggcaa
atttgggccaaaaactgcctaaaatagggttgtttggactttgtgcaaaa
tcctgtcattacttttttctgattttttgtacaaggatggagggcaagat
tctctaaagaatggctgaagtggtttttcccggaaaattcttattcgcct
taaaagacggattttcgtattttggggaaattccctttaaccaaataaga
aaatatagcttttctcaatgttgactcataatttttttctgattttttgc
acaatgatgcgaaatggcaatgcctaaaatgtgacggagccagattttta
aggaaaattattttgggcaaatttgggcNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNttttacattattcaacacacaagctttatttttccattctga
atttttgtacaattattgtcacttttttcttattttcatctgatgttaat
ctttaggtaggtccattcagcatgttgcttgtttaactTGACCTGGTGTT
CAGGTGGTCTTGAAGAGGTGTTTCTCAGTATATTGGCATTGTGATCGATT
TAGATTTTCTGTAGTATTTAAGTACCTAACTGAGTTGCTCTTTTTTTTCG
CAGGATTGTCCAGAGTATTGGAGACAGTATCATGTAACTGTAAGTGTTTT
CagagatttcaatttttttggctaTCACTTTTAAATGTCAAGACAACTTC
TTgtattatgaaaaaaaagtaaagaagcGATGATAAAAAACCTCTTTGTA
AAAGTTAGCTATTACTAAAGAGTTCTATGTAGTTTGAAGAAAGAAACCAC
AAGAGGTGGGCATGCGCAGTGATCATCATCAGTGGACCATTCTTCTTCAC
TGAAGATGTTTATAAGTTCATTGTTTATCTATGATCCTTTCAGATTGAAT
CTGGACCGATCATCATGTTATCCatatcatcaaaaagcaaagagAAATCA
AACAAAGAGAATCGATACTGTTTTAACTGTGCGTCAACCAAACATTTTGG
AGAGGTAACTATAAGTCACAATTGGTAGCTTTTCTACTCTATTTAATTTT
CGTAAACTCTTTGTCTGTTTTATAATTTAGAAGAAAAGCTTGGCTTTTGT
CATAAAGATTAGACATCATTTCTGTCTTGCTGACCAGAGTTGGTTGAGTA
ACCATAAAATGCTTGGGTAATGATGAAGAATGAATtcaattgaaattttc
ctaaagTGAGGCTGCTAAGAGATTTCTTCCTTTTTGTTTTCAGGAATGTA
AATACGATCGGTTGAATAAGGGGCCAGTTTGCGGACAGTTTGTGGTCAAT
TACGATCCTTGTACAACTGAAGGCCACGAAGTCAGTAAGAGAGACAAATC
GAAACGCGACAAAGAACGTAAAGAAAAAGAATCGGGTGAAAAACGTAAAG
AATCGAGAGACTTGAGAGAATCGCGTAGGAAAAATCGTGATAGTTCGCCA
ATCGAGTCGCCCCGGAAAAGCAgtagagaaaaaattaaagatcGCGATTC
TAAAGACTCCCCTAGAGAGAAAAGCACCAGGGACTCTAACGAATCTCCGA
AGGATTCACTGAGATCACGTGACAGTAAAAAGGAAAAGTCAcgtgatgaa
aaagaaaagagcAGGACTGAGTCTCCCTCTGATTTGTCAATGGAGCGaga
taagaaaagaaaaaagaagaaagaacgcGAAGAATCGCCTATCACTTTGA
CTTCTAGTAGTAAAAATCTCGataaggacgaaaagaagaaagattcaAGC
GAAAAGGAGAAAGATTCTAAGAAACGAAAACGAGATtctgagaaagaaga
aaaaacgaaATCGACTTCAAAAGATGAAGAAATCGAACCTTCGAAAAAGA
AGAGTAAAAGTTCAAAAGATAAAGAGAGCGAAAAGAAAGATGAAAAGCAA
CGATCGTATGAAAATATACGGCGAAACATGTGGATTAGTGACGACGACAA
TATCTCGATAGACAGAACAGAATCGTCGGAAGCgccgaaaaagttttcat
tAGCCGACcatctgaaaattggatttggGTTAACTTCGAAAAAACGTAAA
GGTGAAAGCGATGTTGACAAATCTAATAAGAAACGGAAACGAGAGGAACC
GAGTGGGAGCGAAAAATCCAAcgacaaaaaacgaaaaacgaaaacaaaGG
ACGAAAATGAACAAAGTAGTTCACAATCAAGTAATCCTGATAACGATATA
GATAATCAAAGTAAAACGAAAGTTAAACGAGAAAAAACGATTAGCgacga
aaaagtgaaaattgataaaacatTAATTACTGAGAAAACTGACCAGCCAC
AGCAAAGTAAAACGGCAGCAAGTCGAATAAGCAATAGCACAAGCACCATA
TCTTCTAGTAAGGCTAAGAATAATAAGACTTCTGAATGGATGGAAAAGTG
GGAGGATTATACAAACGATGCTGTCAATGAGGACGACGAAAAGTACGAGT
TACTTCAACGAGTCGATTCGTCGGAAGTCACCGAAATTGTCATCGAGGAT
GATGAAAATTCGAATGATAGTGTAGCGACTCTTGATTTCGACGCACCGAC
AACGAGGCCATTGGCGCCCAACGTTATACTTATTGACGATGATGAAGGTG
AGGATGTTTCTTTTCATTAGACCGatcaaaatgttcttttctttcgCAGT
GTGAAACTTTCAAAAGATACGGAAAAATTGTTCGAAgcttacagtatgtg
gcccccaaaacggcgatcaaatttgaaatttctctcaaatctagaggaaa
agagattttacaaaaatttttgctgcatgaaaacctttaacatctctact
ttatttcctggaagttctttttcaaaattttcaatttccacaatattttt
caatcgcttaaagataggtagcttttttctaatggcccccaaaacggagg
tttgaaatttttgcgatttctcgagatatatttaagatatgaatacaaaa
ttttgaccatagttttgaaatatgatttagagggttttgggcataaattt
atttgatacatttttttacagtatacccctggttgtcaaaatgcaggttt
tgggcccccaaaacggaggtgtagctaaaatcaaattattaagcccaNNa
aatttatgatttttatgaaatatttcaagattttcgatattgcaaagtcc
aaactgaaaatttagaaattttcaaaataacaattttgatttaacaacgt
cataatcaagtttttgaaaacaaatctcttttgaaaatagttcaattcat
gtatggaataagctgtgaaaattttagaaaaaaagcttaactgaaactga
aaatattaagctttaaagattattgttctcctatattttgcaaaaaaatg
acagaatttgccgtttttgatGATTCAGCGAAAAGTTTGATatataatgt
caatttttagttataaactattaactcaaggtgataggaatagaattcca
agatattttgctttttctcatatttagaattttcggttttgtcaatgctg
attctagggctccaaaatactggttgactttcaagatgctatatctttta
cccagcctctaaagtcacagatgtatttgcattttctgaacggcattagg
tgtagaaagtttcctataccccgttttcataacttattttcaatatccaa
ggagctagagtgagttatacgcaatttttatctaattttggtgttaaaat
atttcctttagacgcaaatatgttattctgaatccgtctcaaaccagaaa
aaacatgctcatttttaagtataaccatcattctttcaaaataaacaaaa
atcgtttaattctgataaatctacaagtcagaatcttcattttaatgaaa
acctccgttttgggggccgtctccgttttgggggccatatactgtaattA
TAAATCGGTCTACTCAGGTTGGAATACGCAGTGCAGATTTCCAATATCAA
CGAAATGCATACATTTACTCTCCCACCCAATCTACTGATAGAAGAGGCCC
CCAGCGAACcttcaatgaaattttcacgcattcacgcaagtgaaaaagcc
cattcacacGTTTGCACAGTCAGCACGAAGGGGGGGGGGCATAGAAGAGT
TGTGGAGAGAACTTTAATGAATTTCTTCAAATATATATAGTCACTTTACG
AAATCGGTTCTAAGGGATGTATGATTAGGCGTAAatgacttttaaaattt
tccttgcATTTCTTAGATGAGACTTCACATACCACTCAAGAACAAGCATC
TCCACTGCATTCACCAGAACGCACCAAAGTGAAGCCAAACAAAACTATCA
GTGAAAGCCCGAGATccaaaaagtacaaaatgaaCGGTATGTTTTCTACA
TATTTTGTGCTTTGTAGTTCTCCTTCTGTAATGTCGGTCTGAAGAGCTCT
CATTAAATCCTCGTAAATTAAATTACATTTTATGATGTAATTTCTAAATT
TCCTTTTTGCAAAGTTAATTCAATTCGGGGATCGGATTTTCTTACACCTT
TCTCTAAAAGCATGAATTCATTTATATGCGCCTCGGTTTCAAAGTCTTGT
TGCGAAGATGCTTCAACAGCGCGTCATTAAACATAATATGAGTTAGTGAG
TGCTTGCTCTTGTGTCTcaaaattgattgattttaggggagtatatatta
atattatcaAAGTGTTGATGCCCGTAATGACATCCATACCAAAGGAGGGG
TGGACTAGCATTTCCaggggggcactccaggtaaggGACCTAGCAGACGT
GCGGCccttctcaatcccggccaagcaaaacctttgatcgaagttttttg
aaaagtgaaaacaaacttcactcaaagatggcggatatggcttggtccag
ggatacaTAAAGGTCAGTGTGCAACCCCTTGTATGGATTTTAAACGGGAC
AGTCAAATAAACATCTTATGGAATCCCTTTTTTTCCAATTTGCCCCTTAG
TTGAAGCATTGAACAATCTGAAGACGATACTGGATAGTGACAGCGATAGT
GATTCTGACGACGAATGGGCCGACGATGACGGACAACAACAATCGTCATC
TACTCTCAACCCTCAACCCAATTTTCATGATGATGATAGTGACGTATCAG
TGACCGAAGTTGTCTCTTTAGGTAAGAAACAACATTTTCCACCCCTTTTC
ATCCTCTACGAGAAgattttattccaaaaaattgaaacacAAGGAAATAT
TTCGCTTTTTCCCATCTCCCTATATCACAAATATGTTTCAGGCTCAAAAG
ATAAAAAGACACGTTCATTTATTTCAACACAAGTCCTTTTAATCTTTCCT
TCTCTCTCCTCAGACGGTGGTGATACGCATGCGCGAGATGTTGAAGAGCG
AACGACATTAGACTACAACCAAACGCCCCGCGTTTCGCCCACTACACCGC
CCACATTCAATAATATCGTTATCGGTGacgatgatgaagatgaagatgaa
gttAATACAACAAACAGGGTATAATTCTGCTTTATTAAATATTAACTTAA
AAATTGATTAAATTTCATATGGATTGATTTTTGCGTATTTTGGCtctttt
cgcgaaatttagtcttcgcttaaaattgaaaatcagaATTTGGGCCCTAT
TCCGACCCCCagggaaatgaaaataaaaataggtaaaaaaggggctgatt
cgcgaaatttaatccaagCGAAATTCTTAGATTCTCAATTTGcgaagatt
aatccaatcaaAGGTACTCAGTGGTTCAATCACTTATCCTGAACGCTACC
TTAATGTGTCTTTCTTACGCCAGCCACTTTTACAAAGCAGGTCTAATTAT
GGAACCAGTCAAACAATTACAAAGAAAGCCGGCGTTTGTGTAATGCTTAT
TTTTAGTAGAATGGATTAAATTTTGAGTGAAGGACAATACATTGAATTCt
cagttttacttttttataacaacgtcttattattaatttcagatttcaat
tcatttttttttataacaacggCTTATCTTAAAAATTCGCctcaaattgc
tttttaatgacTATCTGACCCTGTCAGCGATGCACGCTTTAAAATTGAAG
CAGTTTTACCGATTTCTCGAAGTGAAGGATAAAAGTTTTGATATACAAAT
GAAAGGAATCTCTGAAGAGATCCGATGCGCGCCGAATGTAATGCGGGATA
TTCGCTGTACACTATTAGGACCTGACATACTACGATCCACGTGCTGTATA
CCAAGAACATCTCGTTATCTATAATCTCGTAAATGCAACGCAAACCGTAT
CCAAGCTGAAGGAAATCGACCCTGTAATCCTCCCGGACACTAGCCCGTTC
TCCAAAACTGGAAAAAGGTTGGATTCAAGAAAGCAATCTAGTGCTCCCAA
AGAACCTTTCTTTATTCCGTGGATAAATCGTGAAGTAATCGAAGGGCGTA
TGAAGGGTGGACTTAAGATGTNGTACACTATTAGGACCTGACATACTACG
ATCCACGTGCTGTATACCAAGAACATCTCGTTATCTATAATCTCGTAAAT
GCAACGCAAACCGTATCCAAGCTGAAGGAAATCGACCCTGTAATCCTCCC
GGACACTAGCCCGTTCTCCAAAACTGGAAAAAGGTTGGATTCAAGAAAGC
AATCTAGTGCTCCCAAAGAACCTTTCTTTATTCCGTGGATAAATCGTGAA
GTAATCGAAGGGCGTATGAAGGGTGGACTTAAGATGTACGCCAACAATGA
CTTGAAACCATTTGCTAAAAGAATAACTATCAGGAAATGGAAGGCGGAAG
CAGAAAACTATAAAGAGAAATTAATCGAGGAAGAGGCACTACGTCGTGGA
ATGTCAAAGGTAAGTCAAGTACGTTATGTATAGTTCCAGTTCATAGATTT
AATGAGCCAGTACCTCACCCAAAAACCGGTATTTTCCATTCCATTTCTTA
AAGTGGAGTACACGTTAAtcgcgtagaaaaaacgcgggtgacgtctagta
aaGGCTAAGACTATAACTTCAAAGGATAACCGAGCTCAGTTGAATCTAAT
ACTCTGATAAACCtttgttgaacggtgaaaatgAATGAGACTGTTATCAC
TATTTTTCATTCTAATAGACATACATCCTCTTTAAAAAGACTTACAAAGG
TCAAAGAAACTTTTTACATTCTGATAGGCAAACTGTGACGCATTTCGTCA
ATGTGTCAACTTTTGTTATTTATCGGAGGTGGTCCTCCCTTTCTTTCTAT
TACATGGTGCTCTTTCCGTATGGTCGACGTCGGCTAATCAGATATTGAGT
ACGTTCACTAACTTCCTCTTTTAGAAAGAGATGAATACACTTTCAAACCG
TTTTTTCAACGAACTGGCGGTACAACATCTTCGAGAGAACGCCCACCTCA
TCAATAACGAAGCTGTTCAACATAGGCACAAAAAGGTCGATTGGCGACGT
GCTAAAACGAAACGGAAATTTGCgcgaaagaaattgaaaaagaaagctGT
TACGGAACACTTTGATTTGCAAAAGAAGGATAAATGAAAAGGATTAGCCA
TGAAATAACTTATTTCGAGAGTAAATCCTTAACTTGATGCCATGTTAGGA
AGGTTGGATGCACCACAGTGCTCGAAAAtagttttgaagaaaatttttca
tcgCTCACTTGTGAAATCGTTGGTTTTNCCCCGATCCATCCACAGGGCTC
GAAAAtagttttgaagaaaattattcATCGCTCACTTGTGAAATCGTTGG
TTTTCTCTTAGTTTTTGCGTACCGACCCGACcttggataaatatttttat
actttttgatgTTGATTTGAACTGTGTACTTAGTTTTGTAAAATTTACGC
CACGAGTTTTCTTGTCTTTTCTTTAGTTTTACACTACTTTAATAGGATag
attttggcggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037462XLOC_037462Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059512-exon-scaffold_329-1491911889:304527..304564TCONS_00059512-exon-scaffold_329-1491911889:304527..304564Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:304527..304564TCONS_00059512-exon-scaffold_329-1510915933:304527..304564Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:304527..304564TCONS_00059512-exon-scaffold_329-1575043694:304527..304564Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:305960..306043TCONS_00059512-exon-scaffold_329-1491911889:305960..306043Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:305960..306043TCONS_00059512-exon-scaffold_329-1510915933:305960..306043Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:305960..306043TCONS_00059512-exon-scaffold_329-1575043694:305960..306043Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:306222..306265TCONS_00059512-exon-scaffold_329-1491911889:306222..306265Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:306222..306265TCONS_00059512-exon-scaffold_329-1510915933:306222..306265Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:306222..306265TCONS_00059512-exon-scaffold_329-1575043694:306222..306265Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:307377..307496TCONS_00059512-exon-scaffold_329-1491911889:307377..307496Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:307377..307496TCONS_00059512-exon-scaffold_329-1510915933:307377..307496Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:307377..307496TCONS_00059512-exon-scaffold_329-1575043694:307377..307496Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:307854..307955TCONS_00059512-exon-scaffold_329-1491911889:307854..307955Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:307854..307955TCONS_00059512-exon-scaffold_329-1510915933:307854..307955Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:307854..307955TCONS_00059512-exon-scaffold_329-1575043694:307854..307955Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:308526..308603TCONS_00059512-exon-scaffold_329-1491911889:308526..308603Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:308526..308603TCONS_00059512-exon-scaffold_329-1510915933:308526..308603Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:308526..308603TCONS_00059512-exon-scaffold_329-1575043694:308526..308603Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:310430..310465TCONS_00059512-exon-scaffold_329-1491911889:310430..310465Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:310430..310465TCONS_00059512-exon-scaffold_329-1510915933:310430..310465Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:310430..310465TCONS_00059512-exon-scaffold_329-1575043694:310430..310465Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:310720..310830TCONS_00059512-exon-scaffold_329-1491911889:310720..310830Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:310720..310830TCONS_00059512-exon-scaffold_329-1510915933:310720..310830Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:310720..310830TCONS_00059512-exon-scaffold_329-1575043694:310720..310830Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:311070..312423TCONS_00059512-exon-scaffold_329-1491911889:311070..312423Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:311070..312423TCONS_00059512-exon-scaffold_329-1510915933:311070..312423Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:311070..312423TCONS_00059512-exon-scaffold_329-1575043694:311070..312423Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:314043..314162TCONS_00059512-exon-scaffold_329-1491911889:314043..314162Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:314043..314162TCONS_00059512-exon-scaffold_329-1510915933:314043..314162Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:314043..314162TCONS_00059512-exon-scaffold_329-1575043694:314043..314162Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:314777..314947TCONS_00059512-exon-scaffold_329-1491911889:314777..314947Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:314777..314947TCONS_00059512-exon-scaffold_329-1510915933:314777..314947Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:314777..314947TCONS_00059512-exon-scaffold_329-1575043694:314777..314947Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:315140..315294TCONS_00059512-exon-scaffold_329-1491911889:315140..315294Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:315140..315294TCONS_00059512-exon-scaffold_329-1510915933:315140..315294Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:315140..315294TCONS_00059512-exon-scaffold_329-1575043694:315140..315294Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:316261..316635TCONS_00059512-exon-scaffold_329-1491911889:316261..316635Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:316261..316635TCONS_00059512-exon-scaffold_329-1510915933:316261..316635Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:316261..316635TCONS_00059512-exon-scaffold_329-1575043694:316261..316635Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1491911889:317101..317687TCONS_00059512-exon-scaffold_329-1491911889:317101..317687Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1510915933:317101..317687TCONS_00059512-exon-scaffold_329-1510915933:317101..317687Clytia hemisphaericaexon
TCONS_00059512-exon-scaffold_329-1575043694:317101..317687TCONS_00059512-exon-scaffold_329-1575043694:317101..317687Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:304527..317687 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.15049	6.30399	2.49265	1.77317	11.0683	8.00079	5.37626	6.53604	3.59488	4.09006	4.88781	2.9048	3.36874	4.1009	4.68508	4.4346	3.6988	3.88501	2.2561	2.60727	2.92609	2.87093	6.11153	6.63914	7.33703	5.52741	2.21546	2.20996	5.05504	5.69738
Blast
[Close]
BLAST of TCONS_00059512 vs. Swiss-Prot (Human)
Match: ZCHC7 (Zinc finger CCHC domain-containing protein 7 OS=Homo sapiens GN=ZCCHC7 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 9.932e-18
Identity = 65/218 (29.82%), Postives = 97/218 (44.50%), Query Frame = 2 
Query:   56 TWGILGAHSTIKEKINSLSAV-------VGEDSENWDVNEQDLNEK-GNKK---HATKRYYLEDELPNIICFNCGLKGHIGRDCTQERKLPTCSLCGTDGHVRRHCPNEFCFNCMETGHRARDCTEERKKPRHLLRCKRCRNVGHLKQDCPEYWRQYHVTIESGPIIMLSIXXXXXXXXXXXXRYCFNCASTKHFGEECKYDRLNKGPVCGQFVVNYD 676
            +W +LG     K+    L+ V        GED  NW ++++D+  +  N +     T+RYY  ++  NIIC NC  +GH+ ++C   RK+  C LC   GH+   CP   C  C         C       +   +C RC  +GH    C E WRQYH+T + GP       S+    +     YC++CA   H+G EC    +        F+  YD
Sbjct:  175 SWMLLGCEVDDKDDDILLNLVGCENSVTEGEDGINWSISDKDIEAQIANNRTPGRWTQRYYSANK--NIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCLFRHSWDK---QCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALA-----YCYHCAQKGHYGHECPEREVYDPSPVSPFICYYD 382
The following BLAST results are available for this feature:
BLAST of TCONS_00059512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZCHC79.932e-1829.82Zinc finger CCHC domain-containing protein 7 OS=Ho... [more]
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