TCONS_00059609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059609
Unique NameTCONS_00059609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2682

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059609 ID=TCONS_00059609|Name=TCONS_00059609|organism=Clytia hemisphaerica|type=transcript|length=2682bp
GAAATTTACTATTTTTCAGCACAAAAGACGCGAAACAGACCAAACTAATG
TTTCTCTAATGAAGCGCATAAACTTTTAAAGTGGACTGAAAAAAATGTTG
AGCTGTTCGCGAAAGAGACAGGTGGATTTAAAATTAGTTAAATTGTTTTA
AATGAGATTTTGAAAGGTTTTGGAATTTCTTAATTTGATTGCAGTTAGAT
TATTCTCTAgtcaaaatctttaaagtgGTACACATTAAAGCTTTGTTCGT
ACCggcatttttttcaatatatttgatACGAAGGCATTTTTTTGGTTTAT
TGTTCAGAACTTCTTAAAGACTTTGATATGGTTTTAATATGCGAATGAAA
AATACCTGATACAATGTCGAGTCCAAGAAGTCCTGAGCGTACGATTCGAA
CACCAAATGGTAGTGTTTCGTATTATTACTATGATCAGAGTCCCCGGAGA
AGCACGGGTGAGCGGACAAACCAAGTGACCAGATCACCAAAATCAAGTCC
CGAACATAACCGTACTTACGAGACTAAAACATATTACAATGAAGGCGAAA
ACGAGGCTAGTAGGTCACCAAAGCGAGGCCCAGGATCTGGAAATGTTTAT
TCGACTTCTCGTGGTAAGCGAAGTCACCTCTCAGGAGAAGAGAGAAGATC
ACCTAGAAGAGTGATTCATAAACAGCTATCGAACTCCATCGCATTGCCTA
TAATACCCGACAAAAGGCTAACTGTTGAAGAACACCTAAGCCGACGACTA
TCGAATTCGATTGCTTTTGAAGGTATatttgaaagtgaaaaaaataataa
aaacaatggCGATAAAAAAACTCGTAAAAATAATAACGATAAAATCGAAA
ACGGAAATTCAAAACCTGTTGAAGAAGAGGAAGTTAGCCTGGATGACACA
AAAAACTCTAAAAACACAACAAAAGGGGCTAACGATTCGTCAGCTTCAGA
CTCAACACCAACGAACATAGACGAAACCGGAGAAAACGCTAAACTCTTAT
CCGTCCGGCGTATCGGAACACCGGAAAGAGACCGGAAACCGGGTACTTCC
GCTGGGGCAGATAGTACATCGTCTTCTATTAACGATGCGGAAGCTCCGGA
TGTTTTCTTTCCGAAACGGTACATTCTAGCCATCATGATGTTCATGGGGT
TTGTCAACATGTATGCTGTGCGTGTCAATTTGAACGTTGCCATAGGAGCA
ATGGTCAACAATCATACAGTCGTGAAAAATGGTGTCGCCATCACTGTGGC
TCCAGAATTCAACTGGTCCTCAAGGCTGCAAGGAGTCGTGCTTGGATCAT
TCTACTATGGTTACATGTTTCTACAAATTCCGGGTGGTTATTTCGCTCTC
AAGTTCGGTGGGACACGCATCTTTGGTGTCGGTGTGTTGTTAGCGTCCAT
ACTAACCATTTTCACACCGATCGCAACACGCTACAGTGTTTGGGCACTGG
TTGTGTTGAGAATATTAGAAGGTTTAGTATTGGGTGTCATGTTACCTTGT
AACCATCAGATATGGGCGAGCTGGGCGCCACTACCTGAGAGGACCACCCT
CGTTACCATTGCCCTTGCTGGAATGAACGTAGGGACAGTAGTTACTATGC
CGTTGACAGGACTGTTGACAAAGTATGGATTTGATGGTGGCTGGGCTTCC
GTATTCTACTGTTTTGGTTTATTTGGTATCGTGTGGTACATTTTATGGTT
TTTGGTGGTTCATTCCACGCCTGCAACTCATCCAACCATCTCCAAGAAAG
AACGACAATACATTGAAAATCATACCGTCCCTAGAAAGAGCACAAATATT
CCATGGTGCACGATGTTATCATCCAAAGCTGTGTGGGCTGTCATCATCGG
TAACATCACCAACGATTGGGGACTGTACACCATCTTGATTTGTTTACCGA
TCTTCCTTATGGACATCATGAAATTTGACATTCAAACGATGGGTTTCATA
GCATcgctaccatttttgttgaaAGCAATCGTTGGACCATTGGGAGGAGT
GATAGCTGATTTGTTGCGTTACAAATACATGTCTACCATCAACGTCCGAA
GATTGTTCTTCGCTCTCGgCTCAATATCAGCTGCCATTTTAATTGTTGTC
ACTGGTTACTCTCATTCGCCAATTATTGCAGTGGTCAGCATGTGTTTGGG
TGTGGCCATGTCTGGCTTATTACATAGTGGTTATGAGGTCAATATTTTGG
ATATCGCCCCTGGGTTGTCTGGTATCGTAATGGGTATTACGAACACTGCC
GGAACCACCACTGGATTCTTGAGCCCGCTTTTTGTTGGATTCATGACAGA
AAATAAGCTTCGCTCAGAATGGATCGTCGTATTTTGGTTGACATTTTTTA
TTTACGTTATTGGTACCATTTTGTATTGTTTAATGTTGTCAGGGGAAGCA
CAACATTGGTCTATGGATGATGAAGACGAAGAAGCTAGAGATAATATGTA
GCCATGATAAAGTGGATTATGGGTAATGTCAGGTAGCATTTTCCCGGGTT
GAATTCTAGGCGAAAAGTTTGGGATTTCGTCCCTGGTCACAGAAGAATTT
CACCTCATAAACATCAAACACAcataaaacaaaggaaataaaccagccga
ggctggaaggtcagccaatagagcttagctagatagctttaataagtggg
ttaacagatgtaagagatgtactgaaacagag
Run BLAST on NCBI

transcript from alignment at scaffold_329:707596..716424-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059609 ID=TCONS_00059609|Name=TCONS_00059609|organism=Clytia hemisphaerica|type=transcript|length=8829bp|location=Sequence derived from alignment at scaffold_329:707596..716424- (Clytia hemisphaerica)
GAAATTTACTATTTTTCAGCACAAAAGACGCGAAACAGACCAAACTAATG
TTTCTCTAATGAAGCGCATAAACTTTTAAAGTGGACTGAAAAAAATGTTG
AGCTGTTCGCGAAAGAGACAGGTGGATTTAAAATTAGTTAAATTGTTTTA
AATGAGATTTTGAAAGGTTTTGGAATTTCTTAATTTGATTGCAGTTAGAT
TATTCTCTAGTCAAAATCTTTAAAGTGGTACACATTAAAGCTTTGTTCGT
ACCGGCATTTTTTTCAATATATTTGATACGAAGGCATTTTTTTGGTTTAT
TGTTCAGAACTTCTTAAAGACTTTGATATGGTTTTAATATGCGAATGAAA
AATACCTGATACAATGTCGAGTCCAAGAAGTCCTGAGCGTACGATTCGAA
CACCAAATGGTAGTGTTTCGTATTATTACTATGATCAGAGTCCCCGGAGA
AGCACGGGTGAGCGGACAAACCAAGTGACCAGATCACCAAAATCAAGTCC
CGAACATAACCGTACTTACGAGACTAAAACATATTACAATGAAGGCGAAA
ACGAGGCTAGTAGGTCACCAAAGCGAGGCCCAGGATCTGGAAATGTTTAT
TCGACTTCTCGTGGTAAGCGAAGTCACCTCTCAGGAGAAGAGAGAAGATC
ACCTAGAAGAGTGATTCATAAACAGCTATCGAACTCCATCGCATTGCCTA
TAATACCCGACAAAAGGCTAACTGTTGAAGAACACCTAAGCCGACGACTA
TCGAATTCGATTGCTTTTGAAGGTATATTTGAAAGTGAAAAAAATAATAA
AAACAATGGCGATAAAAAAACTCGTAAAAATAATAACGATAAAATCGAAA
ACGGAAATTCAAAACCTGTTGAAGAAGAGGAAGTTAGCCTGGATGACACA
AAAAACTCTAAAAACACAACAAAAGGGGCTAACGATTCGTCAGCTTCAGA
CTCAACACCAACGAACATAGACGAAACCGGAGAAAACGCTAAACTCTTAT
CCGTCCGGCGTATCGGAACACCGGAAAGAGACCGGAAACCGGGTACTTCC
GCTGGGGCAGATAGTACATCGTCTTCTATTAACGATGCGGAAGCTCCGGA
TGTTTTCTTTCCGAAACGGTACATTCTAGCCATCATGATGTTCATGGGGT
TTGTCAACATGTATGCTGTGCGTGTCAATTTGAACGTTGCCATAGGAGCA
ATGGTCAACAATCATACAGTCGTGAAAAATGGTGTCGCCATCACTGTGGT
ATGTTAGAAATCATATTTCTTAAAGATTTTAACTGACCCTTTCAATTAGC
CCTCCGCAGCTCGAAGCTTTATATTTTGAACTATTTTTATCGAGTATAGA
ATTCCTTATGAACGACACTCTACTAGTAATGGATACTCCGTGACTCGAAC
AACTCTGTTATCTTTTCTGTTTGTATGAGTTATAAGGTGATTAAAGAAAT
GAATCTAAAGATAGCCTAAGCCTTAGGACTACAATCGGCGCCGAAATATA
TTGGCACTTTTGGGTATTTTAACGTTTTTTCAGAGTTTTATGATCGGGTG
AGGATTGCAGTTTCAGTACTTCCACTTTGTTCCATTGGATTTTTCCTAAA
CTTTTACATTTAAACTGTTCCTCGTTTTCTCCATAGGCTCCAGAATTCAA
CTGGTCCTCAAGGCTGCAAGGTCAGTAAAGCTCCATATTATTCTCCCTAT
CTACCAGAAGAATAAAGACGAGATTTGGTGCCAAAGCTGATGTGAGGAGA
TTGCTTCCCCTTTAATACTACCGTAATATCGACACCCTTCTAATTTCGAC
ACCCTTCTTTATAGATAGGAATGATCCGAAGGTCTGGATCACTGATAGAC
AAAAGATTTTGTCCAATCTGATAGCTAAGCAAGGGAAAAAAGTTTCTATC
AGCAATCCCGACCTTCCTATTATTCCTATCTGCAAAGAAGGGTGTCAAAA
TTAGAAGAGGGATGTTGGTATTAGACCAACTTATGGTAAATAAATAGTGA
CGCCGGTCTCTTCTCCAGGCGTCAAANTAGACCAACTTACAGTAATTAAA
TAGTGACGCCGGTCTTTTCTCCAAGCGTCAATAAGATTTCTAGCGTGGAG
GATTTTTCTGTCTTACCATTCTCTGTGTAAACATAAACACTCTTTCACCA
ATGAACTGTTTTCATTTTCCAGGAGTCGTGCTTGGATCATTCTACTATGG
TTACATGTTTCTACAAATTCCGGGTGGTTATTTCGCTCTCAAGTTCGGTG
GGACACGCATCTTTGGTGTCGGTGTGTTGTTAGCGTCCATACTAACCATT
TTCACACCGATCGCAACACGCTACAGTGTTTGGGCACTGGTTGTGTTGAG
AATATTAGAAGGTTTAGTATTGGTGAGTTTGTCTGGCTTATGTTTTTATA
AGGGGGTTGTTCATCAAGGTTAGACGAATGGATGATGTCAGAGTGCTCGA
CTATAAACTAAAATGATTACATAATCTATAGGGGGTTGTTAGGGGCTGTT
AGGGGCTGTTCAGATCAAATTGGTTAAATTTAGTACTACTGTCTTTCGAG
CAACGTCATTTATATCACAAACCTTTTCTCTGCGATTCAATTTGTTACAC
TTATCTATACTTTGGCCATGCGTTCATTTTTGTCAGCGAGTTTTATTAAT
CACATGACAAAATCTTTAAAACAAAACCTTTAAAACATGTATTCCAAGAC
CGCCAGTGTCATCATGCAATTGATATATGCTCTTGCAGAAAACTGGTGCT
TTTCTTTCTATTCCATTTTCATTATTGTATATTTTATTTCTTTTCCATAG
GGTGTCATGTTACCTTGTAACCATCAGATATGGGCGAGCTGGGCGCCACT
ACCTGAGAGGACCACCCTCGTTACCATTGCCCTTGCTGGAATGAACGTAG
GGACAGTAGTTACTATGCCGTTGACAGGACTGTTGACAAAGTATGGATTT
GATGGTGGCTGGGCTTCCGTATTCTACTGTTTTGGTATTAACTGTTTTAC
ATACTCTTTGTAATCGTATCTCGGCTTTGATTATATTTGAAAAGTTTCAA
AAGTAAGGGTCCTTCCCAAAATATTACAAAGAATTTTGCTATTATACTCT
CTGTGTTTGCCTTTTTTAGATTAACATAATCAGCTATCATCAGCTATCAG
CGCAAAAATTCATATGTCGCCCTGTTCCCATTGACCCCGCCCGAATAAAA
TCTTAGAAGAAAGTGGGAAAATATCTTATTTAAGGCTTGCGTCCGTGAAA
CAAAATGTGTTTAAAACTTTTAATTTGTGGTTTAATGGCACTAAGTTAAA
ATCTTTTTCACCTTTTCAGGTTTATTTGGTATCGTGTGGTACATTTTATG
GTTTTTGGTGGTTCATTCCACGCCTGCAACTCATCCAACCATCTCCAAGA
AAGAACGACAATACATTGAAAATCATACCGTCCCTAGAAAGGTATTTCAT
AAACAGATTGTTCATGAATTTTATTGGCAATTCTTGATATTCATGACGTA
ATCTTTTATACGGAAACACCCGAAAAACAACGGGCCTTTGTCATCAGTTT
TGAATTTAAATAATGAAACTGGTGGCAAACGCCCGCTATTTTTCATATGT
TTCCGTAAAGTAGATAACATCATGGGTGACTCTTGATGTAAAACGAGTAC
TGGATGCGCAAGATGAAGATTTTAGGAATGACTGAAGAAAAATCTTTTTG
TCAGTGTGGGGAGGTCTAACTCGAGCCAAATCTTCTAGGGGACCTAATTC
GTCCGGGCTACCAAAGTTTGTCAGGTTTAACTGGAAACTTTACTGAACCC
ATGTTCATAAAACTTGGCTGAAAATTTTGAAAAGATATCCATAACCCGGA
GGGGGGGGGGTACTACCCTTGCCGACCGACAGTGGTATGCCGCTGAAGTT
CGAAAAATGGACCCTACGTGGGACTCGTTTTTTTTTGTGAAAAAAAAGTG
ACCCTGAATGGGATTGTAATTCAAAAATTTATTCAAATTTTCATAATTTT
CTTAAACTCCCCCAAAAAGGTACCCTACGAGGGACTGATTTTTTTATTTT
GGTGTTTTAGTGACCCTACGTCCCTACGTGGGACACATGGAGTTGAAAGT
TGAAATAAGGTACCCTGACCAGCGGCACATCCCCGTACCCCCGGGCCCGG
ATTCATAACTGGGTTGTCAGAACGTATATTTTATCTTTCCTTTAAATTTT
TTACAGAGCACAAATATTCCATGGTGCACGATGTTATCATCCAAAGCTGT
GTGGGCTGTCATCATCGGTAACATCACCAACGATTGGGGACTGTACACCA
TCTTGATTTGTTTACCGATCTTCCTTATGGACATCATGAAATTTGACATT
CAAACGGTAAGTTTGGTTGGAAAAATCTAATGTGGATTATGATGGTTTGA
CAACTCAGCATTTTAATATCTGATTTTGACTTTTCAACGAAGAACTTAGA
AAATGAGAGCAAACATTTTGGAGTAATTGAAATAGATATAGTTTGGTTAC
CTTATTGGCCCTTTTTACGCCGGCCCTTATTGGCGTTATTTTTAGGCTCT
CGGCGTAAAAAGGGCCGATAAAGTAATGACGGGGATACAATCACAACGAC
TCTTCTTGTATTTTTTATACATCCACTGATAGACCATTTGATTTTTCCCC
CATATCGCCACATTTGGCACTTGAAATGTAGTTCTCACTAGCCTATTGAA
ATTTTAACTTTCTGATGGTTCAGTTGTTCAATTGTTACTTTCAAATGCCA
AAAAATGAAACCGTCAAACAAGTAACATTACCCCGTTTCGTTTAGGTTTT
TGATTTCTTTACACAATACTAGTATCTCTAATACTGTCTCTTTTTGATAG
ATGGGTTTCATAGCATCGCTACCATTTTTGTTGAAAGCAATCGTTGGACC
ATTGGGAGGAGTGATAGCTGATTTGTTGCGTTACAAATACATGTCTACCA
TCAACGTCCGAAGATTGTTCTTCGCTCTCGGTAAGTTTCTTGTGATATTC
ATGACGTAATCTTTAGTATGTGAACAATAGTTGAAGAATTTCGATTGAAA
ATATTCCACCCGGGGAGGAGAGGGTACTAGATCGTTGTGAGCGGGCGGGT
ATGTGCCGCCCAACTTTCGACCCTAGGACCCTTAACGGGACTAAAAAGGA
GGAAAAATTGGAAAATGTTGTGAATTTTACGACTCTTATTAGGACTAATT
TGGCCAAACTTCGATGTTTTTAGGGATATTTTCCGACCCTTAATCTGACT
GAGATTTCTCCACAAGGCACATATCTGTACCATTCACTGGTACCCTTCCT
AGGTACCCCCTGGATATTCCATAAACATAAACAACAAGGGCTGCACAAAT
TAGGGTGAGCCAAATGGCTTTGGCTAAAAGGCAGGAAGATCAAGTAGGTA
GGAATACAAAGTCAAAAATGAATTTTGCCTGGATTGTACCAGACCTTTTG
CGCAAGCATGTACTGCCTCGTTTAACCGATCTTTACGGCTTTTTGGTTCT
GTTAATTGAACACTTTGACTTTTAATTGATTCACCTGTTAAAGCTTTACT
AATTTTAACCAAATGCGGTCATCCTCAATCTTGGTCAAATTAGATATTGT
ATTTCAAATCAATGATGCTTTTTAGAGAGATATTGCACTGTGTGTAACGC
ACTTCTTCGATTACTGCCTGTCCCTAGATTTCTTAATACACCTTTAAACA
TATCGGTCTCAAACAAATGGGTTGCATAATATGCATGTTTTACTAACGAA
TAATAGTATTGGAACACCAGCATTGTCAGTCTAAGAAACTAAACAGTTAG
GAAAATGCTGAGCAAAGGGAACAAAAAAAATTTTTTGTCTCCATAACTCG
AACACGTATGGTGACCACAATTTGTTCAAGTTAGGGGCCGTCCACATAGT
ACGTACGCACTAAGGGGGAGGGGGTCTTCTTAAAAGTGTATGTTTGCGTA
CAGGGGGAGGAGAGGGGTCAAAGGAAAATGTACGTACGCAGAGAAAAATT
TTTCATAACCCTTTTTTGCTTGTTTTTTGTCGACTTTTATACGCTTCATT
AATCATATACGCATCAATGAAAAGAAAAAGTTTCTTAATAAACATCGAGT
TCATGTATGAAATAAAGGTCCGAATCAAGCGATTTGAACTTGAAATTTTC
TTCAACTGAGGGGGGGGGGTGAATGAAAAGGACATACTTACCAGGAGGGG
GTATAGCCATTTCTGTACGCTTGCGTACAGAGGGAAGAGGAGGTATTCGA
TTTTCGAANGGGGGGGGGGGGGGTGAATGAAAAAGTACATACTTACCAGG
AGGGGTTATAGCCATTTCTGTACGCTTGCGTACAGGGGAAAGAGGGGGTA
TTCGATTTTCGAAATTTTACTGCGTACGTACTATGTGGACGGCCCCTTAG
GTAAATTTTGAGTTATGGAGTAAAGTTTTATAAGGCATCGTTAACTGAAT
GGGACCATAAAACTTGTTCGAATTAAGGAGATATTTGAGTTATAGTGGCT
TGAGTTATAGAGGTTTGAGTCAAAGAGACTCTACTGTGATATCTAGAATG
GCTGATCATTTAATTCATCTAAAGGTAAAGTAACTTGTAAATTAGAACAG
CAGAGACCCGTCTAAAGTAAATAAGCTACACGTTTTTTCATAAGAACAAA
CTACAGTTGACGCTCTCTTATCCGACGTTCTACTATTCGATAGGCTCCCT
TATTCGATGAAATTTAAAGTCCCCGTCAACAAGAAACTCTCATAAACGAC
GTTCTACTATTCGATAGGCTCCCTTATTCGACGAAATTTAAAGTCCCCGT
TAACAAGAAACTCGCATAAACGACGTTCTACTATTCGATAGGCTCCCTTA
TTCGACGAAATTTAAAGTCCCCGTTAACAAGAAACTCGCATAAACGACGT
TCTACTATTCGATAAGCTCCCTTATTCGATGAAAATCCGATTCCCCTTGA
AGATCGAATTAGAGAGCGTCAACTGTATATAAGAACATGAGGCTTCAATG
GCCAAAATGTTAAGAACAAATTAAGAACATTTTAAGACTTTGCAGACTCA
AAAACACTCGATTTCTTAGGAAAATGGCAAAAGATGCTCAGAAACTGGTC
AAAATAAGAAAATATTAAGAACTTTTTAAGAACATTTTTAGGCTCAAAAA
GTTAAGAACTTCCGAAGGCTTCAATAAATGTTGGAAACGTGTATATGCTT
TTAGAAAAAAACACGTGATTAATACTTCCACATCTTTTTTTCAATTCAGG
CTCAATATCAGCTGCCATTTTAATTGTTGTCACTGGTTACTCTCATTCGC
CAATTATTGCAGTGGTCAGCATGTGTTTGGGTGTGGCCATGTCTGGCTTA
TTACATAGTGGTTATGAGGTCAATATTTTGGATATCGCCCCTGGGTTGTC
TGGTATCGTAATGGGTATTACGAACACTGCCGGAACCACCACTGGATTCT
TGAGCCCGCTTTTTGTTGGATTCATGACAGAAAATAAGGTGAGGTTTCTA
TTTTAGTGGTTGAAACAAAAGACTCTACTTACTTTCTATTTCTTTTCTAC
TGTTTTTGAACTGAAATTGCCTTTTGCGCACTGTAAATGAATCGAGTGGA
GACAAACTATTACATATCCAGTAGCTTGGTGGCTCGCCCAAAATGACGTG
TCGTTTCTATTCTATTGGTTGAAGAATTAAAGGACTCAACATACCGCGGT
TCGACTAAAATTGGAGAAAACTTGGGGGACAAGTTTCCAAAGTTGTCATT
TAGTGCCTCCTAGCTAAAAATATCTTTACTTTGGTGGTTAAAAACTACTG
ATTTTAGACTTTTGTCTTTCTAAAAAATTTACCGTGGGGCGGAGAGCAAT
CGGGAAAATCATCCACTGACCTTTATATATCCCTGGACCAAGCTATATCC
GCCATCTTTGATCGAAGTTTTTTAAAGTTGGTACCACTGACCTTTATAAT
CCCTGGACCAAGCTATATCCGCCATCTTTGATCGAAATTTTTTTTGAATT
GGTACCCGTAAAGAATCCATTACAGTGTTAAAAAAATTAACATCATCAAA
AGCTATCGAGGTAAAGTAGATCTAGCACCCTCGATGCATTTACACCGCTA
TTGAGAAGTGTCGCCATTAGGGTACCACTTTAAAAAAAACTCCGATCAAA
CATTTTGCTTGGCCGAGATTGAGAAACTTGGTCCAGGGTATATAAAGGTC
AGTTGTTGGTACCCGCAAAGAAGCCATTGTAGTGTTTGAAACTTTGCCCA
ACGATAAACGGTGCTACATCATTAGTGTACAAGCGAAACTAGATCTAGCG
CTCTCTCCGCGGGTACCAATTTCAAAAAAACTCCGATCATAATATTTTGC
TTGGCCGGCATTGCGTAATTTGGTCCAGGGATACCAAATTTAGGGTATAC
AAAGGTCAGTGAGATCATCTTCATTCACCTATTCTTTACATTTATCATTT
TCAGCTTCGCTCAGAATGGATCGTCGTATTTTGGTTGACATTTTTTATTT
ACGTTATTGGTACCATTTTGTATTGTTTAATGTTGTCAGGGGAAGCACAA
CATTGGTCTATGGATGATGAAGACGAAGAAGCTAGAGATAATATGTAGCC
ATGATAAAGTGGATTATGGGTAATGTCAGGTAGCATTTTCCCGGGTTGAA
TTCTAGGCGAAAAGTTTGGGATTTCGTCCCTGGTCACAGAAGAATTTCAC
CTCATAAACATCAAACACACATAAAACAAAGGAAATAAACCAGCCGAGGC
TGGAAGGTCAGCCAATAGAGCTTAGCTAGATAGCTTTAATAAGTGGGTTA
ACAGATGTAAGAGATGTACTGAAACAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037495XLOC_037495Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059609-exon-scaffold_329-1575043694:715177..716424TCONS_00059609-exon-scaffold_329-1575043694:715177..716424Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:714755..714788TCONS_00059609-exon-scaffold_329-1575043694:714755..714788Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:714053..714252TCONS_00059609-exon-scaffold_329-1575043694:714053..714252Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:713441..713624TCONS_00059609-exon-scaffold_329-1575043694:713441..713624Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:712984..713105TCONS_00059609-exon-scaffold_329-1575043694:712984..713105Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:712069..712218TCONS_00059609-exon-scaffold_329-1575043694:712069..712218Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:711445..711574TCONS_00059609-exon-scaffold_329-1575043694:711445..711574Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:708937..709175TCONS_00059609-exon-scaffold_329-1575043694:708937..709175Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1575043694:707596..707970TCONS_00059609-exon-scaffold_329-1575043694:707596..707970Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:715177..716424TCONS_00059609-exon-scaffold_329-1510915933:715177..716424Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:714755..714788TCONS_00059609-exon-scaffold_329-1510915933:714755..714788Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:714053..714252TCONS_00059609-exon-scaffold_329-1510915933:714053..714252Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:713441..713624TCONS_00059609-exon-scaffold_329-1510915933:713441..713624Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:712984..713105TCONS_00059609-exon-scaffold_329-1510915933:712984..713105Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:712069..712218TCONS_00059609-exon-scaffold_329-1510915933:712069..712218Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:711445..711574TCONS_00059609-exon-scaffold_329-1510915933:711445..711574Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:708937..709175TCONS_00059609-exon-scaffold_329-1510915933:708937..709175Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1510915933:707596..707970TCONS_00059609-exon-scaffold_329-1510915933:707596..707970Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:715177..716424TCONS_00059609-exon-scaffold_329-1491911889:715177..716424Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:714755..714788TCONS_00059609-exon-scaffold_329-1491911889:714755..714788Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:714053..714252TCONS_00059609-exon-scaffold_329-1491911889:714053..714252Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:713441..713624TCONS_00059609-exon-scaffold_329-1491911889:713441..713624Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:712984..713105TCONS_00059609-exon-scaffold_329-1491911889:712984..713105Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:712069..712218TCONS_00059609-exon-scaffold_329-1491911889:712069..712218Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:711445..711574TCONS_00059609-exon-scaffold_329-1491911889:711445..711574Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:708937..709175TCONS_00059609-exon-scaffold_329-1491911889:708937..709175Clytia hemisphaericaexon
TCONS_00059609-exon-scaffold_329-1491911889:707596..707970TCONS_00059609-exon-scaffold_329-1491911889:707596..707970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:707596..716424 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.653217	1.26037	0.550726	0.387618	0	0.0436994	1.91261	1.58694	1.09673	0.863711	5.9741	4.07405	4.78659	3.47102	4.41004	11.6313	4.47614	3.24451	0	0	4.91868	3.51809	1.82323	2.47178	0	0	0.675855	0.147827	0	0.332073
Blast
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BLAST of TCONS_00059609 vs. Swiss-Prot (Human)
Match: VGLU1 (Vesicular glutamate transporter 1 OS=Homo sapiens GN=SLC17A7 PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.029e-114
Identity = 187/451 (41.46%), Postives = 265/451 (58.76%), Query Frame = 1 
Query: 1111 PKRYILAIMMFMGFVNMYAVRVNLNVAIGAMVNNHTVVKNGVAITVAPEFNWSSRLQGVVLGSFYYGYMFLQIPGGYFALKFGGTRIFGVGVLLASILTIFTPIATRYSVWALVVLRILEGLVLGVMLPCNHQIWASWAPLPERTTLVTIALAGMNVGTVVTMPLTGLLTKYGFDGGWASVFYCFGLFGIVWYILWFLVVHSTPATHPTISKKERQYIENHTV-------PRKSTNIPWCTMLSSKAVWAVIIGNITNDWGLYTILICLPIFLMDIMKFDIQTMGFIASLPFLLKAIVGPLGGVIADLLR-YKYMSTINVRRLFFALGSISAAILIVVTGYSHSPIIAVVSMCLGVAMSGLLHSGYEVNILDIAPGLSGIVMGITNTAGTTTGFLSPLFVGFMTENKLRSEWIVVFWLTFFIYVIGTILYCLMLSGEAQHWSMDDEDEEAR 2439
            P+RYI+AIM  +GF   + +R NL VAI +MVNN T  + G  +    +F+W     G++ GSF++GY+  QIPGG+   KF   R+FG  ++  S L +  P A R     ++ +RIL+GLV GV  P  H IW+ WAP  ER+ L T A  G   G VV MPL G+L +Y    GW+SVFY +G FGI WY+ W LV + +PA HP+IS++ER+YIE+          P    + PW    +S  V+A+I+ N    W  Y +LI  P +  ++  F+I  +G +++LP L+  I+ P+GG IAD LR  + MST NVR+L    G    A L++V GYSHS  +A+  + L V  SG   SG+ VN LDIAP  + I+MGI+N  GT +G + P+ VG MT++K R EW  VF +   ++  G I Y +  SGE Q W+  +E  E +
Sbjct:   60 PRRYIIAIMSGLGFCISFGIRCNLGVAIVSMVNNSTTHRGGHVVVQKAQFSWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLVQY---SGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPLTKFSTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQYVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEK 507
The following BLAST results are available for this feature:
BLAST of TCONS_00059609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VGLU11.029e-11441.46Vesicular glutamate transporter 1 OS=Homo sapiens ... [more]
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