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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059771 ID=TCONS_00059771|Name=TCONS_00059771|organism=Clytia hemisphaerica|type=transcript|length=893bp
TGGAAagtagaaatgaaaatatttacagATTCCTGCAAAATATTGATAGA
CAAGCTAATTAATCAAGATATCAAGAACACTTCAAGATACTTTTCAAATA
CATACGAATATTTCCATCTAAATGGAGAAACGATTCTCCTGCCAAACGTA
ATAATTTGGGATCCCTTGACTACAAATGAAGAATTGTATTGCCCACATTG
CTTTGAAGACAATGGCACAAAGGAATTATTGGTTAAAACTCAACCATTGC
AATGGACACAATGCCAATCAAATTCCATGAACCCAAGAAGGGTTTATGAC
CTTGGCTGGATGTGCATAATAGTAGGACAGATATATATTTGTTCCCTCAA
GCACCGTATCATTTCTTATCATGCAGGTGTTTTAAAACAATTGCAACCTT
CATTGGTACCTTTCACTTTGTCGCATGATGCTGGGGTGACTAATAGACTT
TTGGATTTTATTGTACGATTAGTAGAAAACGGCTCCTCGTTCAATGCCAT
CGAAAGGGTATTAAAAGAAACATTACATGATGAGCTATTTCGAAGGAAAA
TCAGGATTGATCAAATACCCATTGTAGATGTCCAGTCAAAACAAGAACTT
TTCACTCCGAGTATTAATTCAGTTATCAACTCACTGATTGAGTATTTCAA
AAAGTATTCTCACTTattcaaaattcatttcaaagagCAACCCTTGTTAT
CGTCTCTTTCCCTTGATCATACCTTCAAAACTTCTAGTAACATTGGGTAC
ATGAAAGGTCACAGATGGATCAAGGTCTATTTTGATTGGATCAANTTTCG
AGTAACATTGGGTACATGAAAGGTCACCGATGGATCAAGGTCTATGActc
aattttgatattcttgacAGAAACTGGCTACattaaaaatttc Run BLAST on NCBI protein sequence of TCONS_00059771-protein >TCONS_00059771-protein ID=TCONS_00059771-protein|Name=TCONS_00059771-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
WKVEMKIFTDSCKILIDKLINQDIKNTSRYFSNTYEYFHLNGETILLPNV
IIWDPLTTNEELYCPHCFEDNGTKELLVKTQPLQWTQCQSNSMNPRRVYD
LGWMCIIVGQIYICSLKHRIISYHAGVLKQLQPSLVPFTLSHDAGVTNRL
LDFIVRLVENGSSFNAIERVLKETLHDELFRRKIRIDQIPIVDVQSKQEL
FTPSINSVINSLIEYFKKYSHLFKIHFKEQPLLSSLSLDHTFKTSSNIGY
MKGHRWIKVYFDWIXFRVTLGT Run BLAST on NCBI transcript from alignment at scaffold_330:370333..371225 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059771 ID=TCONS_00059771|Name=TCONS_00059771|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at scaffold_330:370333..371225 (Clytia hemisphaerica)
gaaatttttaatGTAGCCAGTTTCTgtcaagaatatcaaaattgagTCAT
AGACCTTGATCCATCGGTGACCTTTCATGTACCCAATGTTACTCGAAANT
TGATCCAATCAAAATAGACCTTGATCCATCTGTGACCTTTCATGTACCCA
ATGTTACTAGAAGTTTTGAAGGTATGATCAAGGGAAAGAGACGATAACAA
GGGTTGctctttgaaatgaattttgaatAAGTGAGAATACTTTTTGAAAT
ACTCAATCAGTGAGTTGATAACTGAATTAATACTCGGAGTGAAAAGTTCT
TGTTTTGACTGGACATCTACAATGGGTATTTGATCAATCCTGATTTTCCT
TCGAAATAGCTCATCATGTAATGTTTCTTTTAATACCCTTTCGATGGCAT
TGAACGAGGAGCCGTTTTCTACTAATCGTACAATAAAATCCAAAAGTCTA
TTAGTCACCCCAGCATCATGCGACAAAGTGAAAGGTACCAATGAAGGTTG
CAATTGTTTTAAAACACCTGCATGATAAGAAATGATACGGTGCTTGAGGG
AACAAATATATATCTGTCCTACTATTATGCACATCCAGCCAAGGTCATAA
ACCCTTCTTGGGTTCATGGAATTTGATTGGCATTGTGTCCATTGCAATGG
TTGAGTTTTAACCAATAATTCCTTTGTGCCATTGTCTTCAAAGCAATGTG
GGCAATACAATTCTTCATTTGTAGTCAAGGGATCCCAAATTATTACGTTT
GGCAGGAGAATCGTTTCTCCATTTAGATGGAAATATTCGTATGTATTTGA
AAAGTATCTTGAAGTGTTCTTGATATCTTGATTAATTAGCTTGTCTATCA
ATATTTTGCAGGAATctgtaaatattttcatttctactTTCCA Coding sequence (CDS) from alignment at scaffold_330:370333..371225 >TCONS_00059771 ID=TCONS_00059771|Name=TCONS_00059771|organism=Clytia hemisphaerica|type=CDS|length=819bp|location=Sequence derived from alignment at scaffold_330:370333..371225 (Clytia hemisphaerica)
TCATGTACCCAATGTTACTCGAAANTTGATCCAATCAAAATAGACCTTGA
TCCATCTGTGACCTTTCATGTACCCAATGTTACTAGAAGTTTTGAAGGTA
TGATCAAGGGAAAGAGACGATAACAAGGGTTGctctttgaaatgaatttt
gaatAAGTGAGAATACTTTTTGAAATACTCAATCAGTGAGTTGATAACTG
AATTAATACTCGGAGTGAAAAGTTCTTGTTTTGACTGGACATCTACAATG
GGTATTTGATCAATCCTGATTTTCCTTCGAAATAGCTCATCATGTAATGT
TTCTTTTAATACCCTTTCGATGGCATTGAACGAGGAGCCGTTTTCTACTA
ATCGTACAATAAAATCCAAAAGTCTATTAGTCACCCCAGCATCATGCGAC
AAAGTGAAAGGTACCAATGAAGGTTGCAATTGTTTTAAAACACCTGCATG
ATAAGAAATGATACGGTGCTTGAGGGAACAAATATATATCTGTCCTACTA
TTATGCACATCCAGCCAAGGTCATAAACCCTTCTTGGGTTCATGGAATTT
GATTGGCATTGTGTCCATTGCAATGGTTGAGTTTTAACCAATAATTCCTT
TGTGCCATTGTCTTCAAAGCAATGTGGGCAATACAATTCTTCATTTGTAG
TCAAGGGATCCCAAATTATTACGTTTGGCAGGAGAATCGTTTCTCCATTT
AGATGGAAATATTCGTATGTATTTGAAAAGTATCTTGAAGTGTTCTTGAT
ATCTTGATTAATTAGCTTGTCTATCAATATTTTGCAGGAATctgtaaata
ttttcatttctactTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059771-exon-scaffold_330-1491911889:370333..371225 | TCONS_00059771-exon-scaffold_330-1491911889:370333..371225 | Clytia hemisphaerica | exon |
| TCONS_00059771-exon-scaffold_330-1510915933:370333..371225 | TCONS_00059771-exon-scaffold_330-1510915933:370333..371225 | Clytia hemisphaerica | exon |
| TCONS_00059771-exon-scaffold_330-1575043694:370333..371225 | TCONS_00059771-exon-scaffold_330-1575043694:370333..371225 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_330 | supercontig | scaffold_330:370333..371225 . |
Blast
The following BLAST results are available for this feature:
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