TCONS_00059826 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059826
Unique NameTCONS_00059826
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059826 ID=TCONS_00059826|Name=TCONS_00059826|organism=Clytia hemisphaerica|type=transcript|length=1146bp
aatatAGCTGAACCGATATATGAGTAAGATGAAATTGGACAATTTGCCAC
CTATTTCTTCGGTCAGAAATCTATGTTTGGTATACTTCTTGTTTCTATCG
CAATCTTTGTGGTCCAGCAAAGTAGTATCGCAATCAGTTCAAGAAAAGAC
GAAGAAAAATGGGTGGACATCAAGAACGAATTTAGTTTGTGAAGATCATC
CAACCAGATGCGACTTTTATTGGTCACGTGGTTGGTACACGTGCAATGTT
GGAGGTGCATTATGGGAAAATTGTCCGAAAAGTTGTGGATTCTGTGGAGA
TGAGAATGCACCAGATTGCAAAGACCAACGGAAGAGCGGTTGTGACACAA
TGAAGAAGAGAGGTTTTTGTAAAACATACAAGGCTTACATGAAGCAATAT
TGCTCAAAAACTTGTGAAATGTGTAAAGCTCAACAAAAACCAAAGATAGA
GCCTGGATGCAGAGACTATGAAGATATGTGTAACCGATGGGTCGAATTTG
GGGAATGTAGAAAAAGTGCTGATGTTCGAAACTATTGTCCAAAAGCTTGT
GGAATGTGTGGTGATAAGATGTCTACAAAAATACCACCAAAGTTGGAACC
AAAAACGTGCCAAGACACTGAGACGGACGTCTGCAAAACAAAATACCTGT
GTGCACACAAAAGAAACATCGCAAGCAAGAAATGCCGAAAAACCTGTAAA
ATGTGTAAAACATATGGATCGTGTTATGATTTAGACAGTCTCTGTTATTG
GTATAAATTTCAAGGACACTGCAAACCAAGCTCAGCTTTTTACAATCACG
TGACATCAAAATGCGCTTTCAGTTGTGGAATTTGTAAATCTTAATTAAAA
CATGCCAAGATGAAATCAAGGATAATTATCATAATCTCCGGAagattttt
tgagaatttattcAAACATCCAATTTTATCTAAGATTTATTCTTTATCAC
ATGATTTTAAAgtgtaaaatttttttcagattttaaaattatgaatatAT
CCAATAGACTTTTTAAAGTTAAATTTATTTGCAGAAGTATTTTTATCCCA
TCATTGAAAAATCATTCCGACGAGAGAAAAGACGAAATCGAAAATTTGCT
AAAAAATCTAATATATATCTATCCCCCCTGAGATTTTTCACTAACA
Run BLAST on NCBI

protein sequence of TCONS_00059826-protein

>TCONS_00059826-protein ID=TCONS_00059826-protein|Name=TCONS_00059826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MSKMKLDNLPPISSVRNLCLVYFLFLSQSLWSSKVVSQSVQEKTKKNGWT
SRTNLVCEDHPTRCDFYWSRGWYTCNVGGALWENCPKSCGFCGDENAPDC
KDQRKSGCDTMKKRGFCKTYKAYMKQYCSKTCEMCKAQQKPKIEPGCRDY
EDMCNRWVEFGECRKSADVRNYCPKACGMCGDKMSTKIPPKLEPKTCQDT
ETDVCKTKYLCAHKRNIASKKCRKTCKMCKTYGSCYDLDSLCYWYKFQGH
CKPSSAFYNHVTSKCAFSCGICKS
Run BLAST on NCBI

transcript from alignment at scaffold_331:691487..706734+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059826 ID=TCONS_00059826|Name=TCONS_00059826|organism=Clytia hemisphaerica|type=transcript|length=15248bp|location=Sequence derived from alignment at scaffold_331:691487..706734+ (Clytia hemisphaerica)
aatatAGCTGAACCGATATATGAGTAAGATGAAATTGGACAATTTGCCAC
CTATTTCTTCGGTCAGAAATCTATGTTTGGTATACTTCTTGTTTCTATCG
CAATCTTTGTGGTCCAGCAAAGTAGGTAAgctaaaattttacttttccaG
CATTTAAAATGTATGAAAGTCCGGGGCTGAGCTGCTTCCttatggtccta
aacctcgtggaaacAACCAATgcatactttaagggcagaaactttcgcga
gaccGAAAAGTCGCCAAATTTTCCCGGATTTAAGTTTcgcaatttttact
ttttgaagaaaatgtttttttttgtgaattttcaattttagtagcaataa
ctttcgcgagtggctagggaaagtgaataaaacattatttcaaatctcat
tttttcttcaatcgaaagagtgatatgctaataaatgaaaaataaacatt
tgcACTTCTTCCTCCCATTCCGAATCCTAGTCAGTGCGATAATATCGATA
ATATTGACTCTCCTcggcttttaaaacttggaaagaactttcgcgatttt
taggaaaatttcatttttcgcgaaattaacttttgcaaatttcttgttta
atttcttacctggcagaagcTTTcgctaaaaacgtaaaaaacccGAAAGT
CTCTGCCTTTAAAGCGATAGTCCagagaagggggcagaactaacgaattc
tcactaaaatagcaTAAAAACGCAAACTCGCGAATTTATAATGTTTACAC
CTTCTTCTGTTCCTTCTCACAAAGCCGGTAGGGGTAGAAATAACAGACCG
AAACTCAATTGTATTGATTCAggtattcccatattttttatggctgggga
tttagattctattgttttcaagtcactAAGTTCAGTGGGGATGCTAAAAT
TAGCATAATATTCtgtagtgaggattggtttatttgattattttcagtgg
agacaaaaattgtagcataattttccactggggacgataacAGCGCACTG
TGCTTAATCtaaagataaattttatttttgacataatcattactctcgac
gtgattgtacgagttccaatcccgtcaacctttgcgttaatctcttttgc
acgttaattgcatcatttgcACGTatattgaattgtgggattgcaacaaa
aaaagtgaaaagtaataattatgacatATGCGTTTCGGAGCGCTATTAGT
AACTTTTAACAgcgctgaagcgatttagaggggctataaccggctgggat
ctGTACTTTAGTCTCACACAAGTCACCAGTggcacttttttttttaattt
ttctgatgAACATGACACTATAAAAGTGAACTAAACTAAGGGACTTGGTT
CGAGTTTGGGTCAAAGGGGCTTTTTTTAAACTGTTCAGTGGGTTCAtgtt
ttgttatattttcttccATAATTGTGGAAGTTACGTAActttacaaaatg
aaaaatctctttttctcaatttctttatgTTTCAGTATCGCAATCAGTTC
AAGAAAAGACGAAGAAAAATGGGTGGACATCAAGAACGAATTTAGGTAAG
ATAAAAAATGATCTTTCACTTATTTACATGCAAGGTAAATAATAAACAAA
TATTGAATTTTTGGTTCCATGAAGATCGAATCAGAGAAGGTCAACTGTAT
ACTTCTTCCCTCCATGCCAGTGTGTGGTATTTACTTTGtatgagtctcca
taactcaaacctCTGTAACTCGACAATCGTCTTAATTTTTCTGGTCCCTT
TATACCCTTAGGGTGAcaagtctctataactcgaacgtcTTACAGTTGAA
AGATATTTATTGTATCTTTTGGATAAATGCTTTACAATTGATATAAAATT
ATATAACATTCCCCTCGCACGCTAATTTTCAACAACTTCTTTAAATCACG
TGTTCACTTAGTTTTCTATCTTTGACTGGNTAACATTCCCCTCGCACGCT
AATTTTCAACAACTTCTTTAAATCACGTGTTCACTCAGTTTTCTATCTTT
GACTGGCTTACATAGCCTAGCAACAACTGTTTTCTTTCTTGTTGTCCGTA
CTACAACCCGTCTGTTTTGTGTTGACGTAATATCTGAATCCCTTGCGCCG
CCATCAACAACATCACTGCTGAAGTCATCAAAATCGTTTGCGTGCAAAAA
TGTTTCCCTTCGCTCCTCGATCACAGATTTCTTAGTGATAATCAATGNTC
AACAACATCACTGCTGAAGTCATCAAAATCGTTTGCGTGCAAAAATGTTT
CCCTTCGCTCCTCGATCACATATTTTTTAGTGATAATCAATGCTCGAATA
TACCGTAACTCACAATTATTGTTGCTATCAAATTCAATACTTCGCCTGTA
TACAGGAATCATTTTAATTCTCATGCTCCACGGACGTAAGCACACAAAAA
GCCCTTTTGCAGAATcccctctctctctctaattttAAATCTTGGTTAAC
CAGCTAACTTATAACGCTGAATGATAAACTGTTAAAGGAGTGTTTTTTCA
TTACAATGTTCGACTTCGAAATCCGAATGTTTTGAAAGAGGAAGTACTTG
ttttggttgaatttttttcaataataatccacatttttcagcaaaaacat
TAAACTTTTGGAAACTCTGGTCTACGaaagttttacaaaaacatACAGTA
TCTCCACTTTacagaaattgaaaaaacatACCCCCAAAGTCGAGACACAT
ACGTTCCACAAGTCAAAGAAAGTCCAAAAAAATCTATCTGGAACACTTGG
AATTATCagtaaaatcttaattgacCTTTTGAAAAGGTTTTTGAATGTCC
CAAAAATGTTTGTCTAGAGTAAAGCTAGGACGTCGAGGTTTTAAGCTTAG
CCTTATGTAAATGATTTATTCTTGAAAACATCCTCATTTTTTCCTTAATT
ATTTTGGGTGCTGGGTTAAATTATAAAAGGGTTTAGTAAATATCATTCAT
ATAAGGATTTGTTCCCATTCAAAACATAATGCACTTACCATAAGGGACTA
GATTTGAAATAACCAGAGTTGAATGACGTCAGACTGATATCTAtaagccc
caggggggggtacttaggaaaaaatgggtgctgggtatgtgcggacggta
agggtcggtttttcacccttcaaagtctctctaagggtcggtttttcatC
CTTCacagtctctttaagggtcggttttcggaggtcccgtccgcataTAC
CCCTCATCCACCAACCCTAGTACACCCCCCGCCTTTAAGTATGTTTCAAT
ATAAATCCCTTTCATGAAGCTTTTAAACAAAAAGGTTGACAAAATACCCT
CTCAACAGCAGTAAAAAAAACTTCCCCACTTATTCTACACTTATTTTTAA
CAGTTTGTGAAGATCATCCAACCAGATGCGACTTTTATTGGTCACGTGGT
TGGTACACGTGCAATGTTGGAGGTGCATTATGGGAAAATTGTCCGAAAAG
TTGTGGATTCTGTGGAGATGAGAATGCACCAGGTAAGTACGGAGCTCACA
ACccaaaaacaagacgacttgaagtcgaaaatttcgcctagaatttaaac
tacataggaaaaacaagaagtagagattgaagcttatttgaaatctactt
tacatcgagccttgatgaaacaattttattagaacaacgaggctcaaaat
cgctaaaaaaaataagaccaatttaagaacaattgttgtttaatttttaa
gaactaataaaaaaaggtaatatcaccgtctatcaaaagttattgatttg
attcttataaagtatatgcttataagaaaaacgaatatgctcatattgtg
cgcaatcccttgtttactttgtaagaactaattaccgaaaggtatattac
cgactataaagagttattgatttgattcttataaagtaaatgcttataag
aaaaataaatgtgctcatattgtgcaccatctcttgtttactctgtaaga
actaattaccgaaaggtatattaccgtctttcaagagttattgatttgat
tcctataaagtgaatgcttataagaaacatAAATGTGCTCATATTCTGTT
CCatcgcttgtttactttgtaagaactaattacctaaagtatatcaccgt
ctatgaaaagttattgatttgattcttatagagaatatgcttataagaaa
catAAATGTGCTCATATTCTGTTCCatcgcttgtttactttgtaagaact
aattaccgaaaggtatatcaccgtctatcaagaggtgtcgatttgattct
tataaagtatatgcttataagaaaaacaaatatgctcatattgtgcgcaa
tcccttgtttactttgtaagaactaattaccgaaaggtatattaccgact
ataaagagtttttgatttgattcttataaagtaaatgcttataagaaaaa
taaatgtgctcatattgtgttccatcgcttgtttactttgtaagaactag
tTACCTaaagtatatcaccgtctatgaaaagttattgatttgattcttat
agagaatatgcttataagaaacataaatgtgctcatattgtgtgccatcc
cttgtttactttgtaagaactaattaccgaaaggtatatcaccgtctatt
aaGAGGTgtcgatttgattcttataaagtatatgcttataagaaaaataa
ataagctcatattgtgcgccatcccttgtttactttgtaagaactaatta
ccgaaaggtatatcaccgtctattaaGAGGTgtcgatttgattcttataa
agtatatgcttataagaaaaataaataagctcatattgtgcgccatccct
tgtttactttgtaagaactaattaccgaaaggtatatcaccgtctattaa
GAGGTgtcgatttgattcttataaagtatatgcttataagaaaaataaat
aagctcatattgtgcgccatcccttgtttactttgtaagaactaattacc
gaaaggtatatcaccgtctattaaGAGGTgtcgatttgattcttataaag
tatatgcttataagaaaaataaataagctcatattgtgcgccatcccttg
tttactttgtaagaactaattaccgaaaggtatatcaccgtctattaaGA
GGTgtcgatttgattcttataaagtatatgcttataagaaaaataaataa
gctcatattgtgcgccatcccttgtttactttgtaagaactaattaccga
aaggtatatcaccgtctattaaGAGGTgtcgatttgattcttataaagta
tatgcttataagaaaaataaataagctcatattgtgcgccatcccttgtt
tactttgtaagaactaattaccgaaaggtatatcaccgtctattaaGAGG
Tgtcgatttgattcttataaagtatatgcttataagaaaaataaataagc
tcatattgtgcgccatcccttgtttactttgtaagaactaattaccgaaa
ggtatatcaccgtctatcaagaggtgtcgatttgattcttataaagtata
tgcttataagaaaagtaaatatgctcatattgtgcgccatccttggttta
ctttgtaagaaataattaccgaaaggtatatcaccgtctatcaagagtta
tagatttgattcttataaagtatatgcttataagaaaaataaatatgctc
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NNNNNNNNNNNNNNNNNNNtagtgagttcgtccaccgtatcaagcacttt
cgttttctaattttttttccgatgacaccgccgcgaaaggctatcgtaat
actttcgctaggcgaaattaataaatattttggatttaaaCAGCCGATTA
AACTCAAGATGTTTTGTAAACCATCATTGCTCTTCCcggcgttgtttcaa
cgtttatctaacgtccacaacgtccatataacgttagatggacgttaaaa
caacgttgtgtgcctgctGGGTTGGCACTTTTTGGCACTTAAAAGACGCA
AAATTGTGAGATAGTTGCCTCCGAAACGCAACACTCGCGCAATTGAGTTA
ACCCAAAAAACTTGGAGCAataacttttcatttttctctctACAGATTGC
AAAGACCAACGGAAGAGCGGTTGTGACACAATGAAGAAGAGAGGTTTTTG
TAAAACATACAAGGCTTACATGAAGCAATATTGCTCAAAAACTTGTGAAA
TGTGTAAAGGTAATAATTTGTTCAACAACCCTTCCATAATGGAAGAAATA
AGTATTCAAATTCGAAAATTCTCCGTTTTTTAAACGGACGTTTGAGACAG
ggcacccctgtgtcacagacccgttaGGTCCCAGCCCCATCGGAAAATGA
AGCAAAAagtttcgtccccggtggggaaatacccttgaatttcagcccca
ctgggaaattgactttgatttcatcccactcgaaattccatgtttaaaaa
tgaCACTACAAacccactgggttttttaaccttggaacaaaagaatttct
atttccattggaatttcaattggaatttttatccccacgaggaaagaagt
tccaccggggctgtgaaacagTGGTGTGACAGAATatagcagtgccgtag
caactgatttttttcaaaaatggtcattttgcaaaatgcaaagtttttaa
ACACATCTTATGTTTGATCAAAGATTGATTTTTattggcccagctagctt
tagcgtactgggcctttcattagcattctgcctggtgtcagtgtgtaaca
atttactaggcgGTACGCGTTTTCAAGCACAGCACAGGCTAGTACATATT
GTGAAGGATTTGATTGGCACTTAGAACATGATTGacagaataaaaaacaa
ttgaaatcgtctttattggttaaaaacataaaaggagaaaatacaattaa
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NNNNNNTCTTCtctttaggaagatgttcttttaaaaaaaagttgttttta
catttctctatcatgtgaacagttcagttgttcacgtgttaggaaaaaaa
ctaacatctgtatataagattaaatattatgaattattactcattgttga
aaataagagatagccgaatggtctaaggcgtctaTAACTTGTATTAGGga
ctccaggttcaaatcccctctgctattcaagtcttgttcagttcatattc
ttattcgctgggccttcatgccctctgggcttcttgtttttttttcaaaa
gcatttcgttttgagtgtattttcaagcaatctagagatcaaattttcaa
aatttttcaggtgtcactaaacttcagcccctcCCCCTAATATGAAAATA
CTTCCTAAGGCACTGTATAGTAGGCATTCTCTAACGAATTTGTTATCCTT
ATAGATCATAGGACTAATATATAAGTAGAGGGAATTtcgtttcaattttt
tgacatcGTGCAAAATTTTCAGTCAAAGCACTTGTATACATCAATAAAGG
AGTCCAGATTTTGAGGGTAccatttttttttcggacactggcgtatttta
cagaccagaatagaaaatGTCCGGAAATCAccaaaattgcaatttttcaa
aaacttcatCAGTTTTGAAAAACATTACATGTCTGTGATTTAGATTACAT
GTGAGGTGATTCTTCGGAATGATAAAAAGAGATTAAGAACTGTTTAATCA
ATTTAGTCTCTATTTCTCTTAAAATCCCTTTTTTCCCCTCTTTTTTCAGC
TAATAAATTttgttcgccaaaattaatcctcgccaaatttcgaaatttta
tcaaatcgccaaaataaattccgtcaaattgcaccaaaattggcgaatga
gctcattcgccaaaatttctgcTCTTAAGGTATCTTGTCTTCACCTCTCT
TAGCTCAACAAAAACCAAAGATAGAGCCTGGATGCAGAGACTATGAAGAT
ATGTGTAACCGATGGGTCGAATTTGGGGAATGTAGAAAAAGTGCTGATGT
TCGAAACTATTGTCCAAAAGCTTGTGGAATGTGTGGTGATAAGATGTCTA
CAAAAATACCACCAAAGTTGGGTAAGTACAAGTTTTatcaagcagcctca
atgtttcttaagaaatcgacattttgagcctgaaatgtttcttacatgtt
tctaaactttgtcaacCTGaaaggacgcatgtcgataatacaatagtcta
atagagtaatctacggtactttcctatcttctatattgattttctgactt
tcttaAGTGTTTTTAACtgttatgtaagtatttttctggaactttgcctt
gattggaaggttcgaattaaaaatgttattttctcattctcagcctcagc
atgtttcttagatgtttcttagtttttaggcattctgagcatcatgtttc
ttaaaagtgtgtttcttaaaaaaaagtgtacacgTTTAACAttattttga
tctgaaaacAACATGATGTGTTTTACTGAGCTCTAGAAATATTCTGTGCC
CCTTATGTTGAGGgagtgtgacgtccagggtggtatAAAACATCCAGGAT
GTCAGTAAAATGAAGTTGAAAATCCAAGAGTTGTTAGtaaaatgaggttg
aaaatccaAGGGTTGTTAGtaaaatgaggttgaaaatccaagtggttcct
gaaaaattgaaaaacaaatccAGGGGTGGTCATCTTTTCTTAAAAAGTCC
TCCTACATAAGGGGtacaaatttattttggaatagcccaatgagaaaaat
tgattttggtgaatttatttcaaaagttcAATTTATACAGAGACGAGATC
AAACTTTTTACCTAAAGTAGTCTTTCTGGTCTAAGATTTGctgagttgtt
tttttttttgcccaaCTTTGATATTTTGGTGCTATGCACAACAATATTTC
CAGTATTTCCCAAAAAATAGAAAGAGAAAGAATCcgtttagagatttttt
tgatgaaaaggGGAGTTACTTATGAACAGGAGATGCCCTTTCCTCGGGCT
Cgttatttttgaatatttccccgctataaggggaaatattagttaaaaag
gcatttctccgatccttggctacttacgccctttttgcgcccttaANNNN
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NNNNNNNNNNNNNNNNNNNACTTGAAAATTATAAgcattaaataataaat
aattcgaaagttactgaagtacggcgcatttttaaggcttcactttttct
tgcctgagaaaggttagagattgaaactcaatgagtccatctgcaagtgt
aagggggaaatatttagtcgcatttgtgCGAATCTTGTTTCTGTTTAGAA
GATCTTTGCNGGGGAATTACTAATGAACAGGAGATGCCCTTCCTCGGGAT
CGttattttttctgttaagaagatCTTTGCCCGATTTTTATGACCCAAAC
ATCTGCTCACACCCTGTTTCCTGATCTGACTTTTTTCAACTCATTATTCC
TAGGGCTGCTTATTATAATAGTAAACATTTAATATTCATTCATTCTAGAA
CCAAAAACGTGCCAAGACACTGAGACGGACGTCTGCAAAACAAAATACCT
GTGTGCACACAAAAGAAACATCGCAAGCAAGAAATGCCGAAAAACCTGTA
AAATGTGTAAAACATATGGATCGTGTTATGATTTAGACAGTCTCTGTTAT
TGGTATAAATTTCAAGGACACTGCAAACCAAGCTCAGCTTTTTACAATCA
CGTGACATCAAAATGCGCTTTCAGTTGTGGAATTTGTAAATCTTAATTAA
AACATGCCAAGATGAAATCAAGGATAATTATCATAATCTCCGGAagattt
tttgagaatttattcAAACATCCAATTTTATCTAAGATTTATTCTTTATC
ACATGATTTTAAAgtgtaaaatttttttcagattttaaaattatgaatat
ATCCAATAGACTTTTTAAAGTTAAATTTATTTGCAGAAGTATTTTTATCC
CATCATTGAAAAATCATTCCGACGAGAGAAAAGACGAAATCGAAAATTTG
CTAAAAAATCTAATATATATCTATCCCCCCTGAGATTTTTCACTAACA

Coding sequence (CDS) from alignment at scaffold_331:691487..706734+

>TCONS_00059826 ID=TCONS_00059826|Name=TCONS_00059826|organism=Clytia hemisphaerica|type=CDS|length=4950bp|location=Sequence derived from alignment at scaffold_331:691487..706734+ (Clytia hemisphaerica)
ATGAGTAAGATGAAATTGGACAATTTGCCACCTATTTCTTCGGTCAGAAA
TCTATGTTTGGTATACTTCTTGTTTCTATCGCAATCTTTGTGGTCCAGCA
AAGTAGTATCGCAATCAGTTCAAGAAAAGACGAAGAAAAATGGGTGGACA
TCAAGAACGAATTTAGTTTGTGAAGATCATCCAACCAGATGCGACTTTTA
TTGGTCACGTGGTTGGTACACGTGCAATGTTGGAGGTGCATTATGGGAAA
ATTGTCCGAAAAGTTGTGGATTCTGTGGAGATGAGAATGCACCAGATTGC
AAAGACCAACGGAAGAGCGGTTGTGACACAATGAAGAAGAGAGGTTTTTG
TAAAACATACAAGGCTTACATGAAGCAATATTGCTCAAAAACTTGTGAAA
TGTGTAAAGCTCAACAAAAACCAAAGATAGAGCCTGGATGCAGAGACTAT
GAAGATATGTGTAACCGATGGGTCGAATTTGGGGAATGTAGAAAAAGTGC
TGATGTTCGAAACTATTGTCCAAAAGCTTGTGGAATGTGTGGTGATAAGA
TGTCTACAAAAATACCACCAAAGTTGGAACCAAAAACGTGCCAAGACACT
GAGACGGACGTCTGCAAAACAAAATACCTGTGTGCACACAAAAGAAACAT
CGCAAGCAAGAAATGCCGAAAAACCTGTAAAATGTGTAAAACATATGGAT
CGTGTTATGATTTAGACAGTCTCTGTTATTGGTATAAATTTCAAGGACAC
TGCAAACCAAGCTCAGCTTTTTACAATCACGTGACATCAAAATGCGCTTT
CAGTTGTGGAATTTGTAAATCTTAAATGAGTAAGATGAAATTGGACAATT
TGCCACCTATTTCTTCGGTCAGAAATCTATGTTTGGTATACTTCTTGTTT
CTATCGCAATCTTTGTGGTCCAGCAAAGTAGTATCGCAATCAGTTCAAGA
AAAGACGAAGAAAAATGGGTGGACATCAAGAACGAATTTAGTTTGTGAAG
ATCATCCAACCAGATGCGACTTTTATTGGTCACGTGGTTGGTACACGTGC
AATGTTGGAGGTGCATTATGGGAAAATTGTCCGAAAAGTTGTGGATTCTG
TGGAGATGAGAATGCACCAGATTGCAAAGACCAACGGAAGAGCGGTTGTG
ACACAATGAAGAAGAGAGGTTTTTGTAAAACATACAAGGCTTACATGAAG
CAATATTGCTCAAAAACTTGTGAAATGTGTAAAGCTCAACAAAAACCAAA
GATAGAGCCTGGATGCAGAGACTATGAAGATATGTGTAACCGATGGGTCG
AATTTGGGGAATGTAGAAAAAGTGCTGATGTTCGAAACTATTGTCCAAAA
GCTTGTGGAATGTGTGGTGATAAGATGTCTACAAAAATACCACCAAAGTT
GGAACCAAAAACGTGCCAAGACACTGAGACGGACGTCTGCAAAACAAAAT
ACCTGTGTGCACACAAAAGAAACATCGCAAGCAAGAAATGCCGAAAAACC
TGTAAAATGTGTAAAACATATGGATCGTGTTATGATTTAGACAGTCTCTG
TTATTGGTATAAATTTCAAGGACACTGCAAACCAAGCTCAGCTTTTTACA
ATCACGTGACATCAAAATGCGCTTTCAGTTGTGGAATTTGTAAATCTTAA
ATGAGTAAGATGAAATTGGACAATTTGCCACCTATTTCTTCGGTCAGAAA
TCTATGTTTGGTATACTTCTTGTTTCTATCGCAATCTTTGTGGTCCAGCA
AAGTAGTATCGCAATCAGTTCAAGAAAAGACGAAGAAAAATGGGTGGACA
TCAAGAACGAATTTAGTTTGTGAAGATCATCCAACCAGATGCGACTTTTA
TTGGTCACGTGGTTGGTACACGTGCAATGTTGGAGGTGCATTATGGGAAA
ATTGTCCGAAAAGTTGTGGATTCTGTGGAGATGAGAATGCACCAGATTGC
AAAGACCAACGGAAGAGCGGTTGTGACACAATGAAGAAGAGAGGTTTTTG
TAAAACATACAAGGCTTACATGAAGCAATATTGCTCAAAAACTTGTGAAA
TGTGTAAAGCTCAACAAAAACCAAAGATAGAGCCTGGATGCAGAGACTAT
GAAGATATGTGTAACCGATGGGTCGAATTTGGGGAATGTAGAAAAAGTGC
TGATGTTCGAAACTATTGTCCAAAAGCTTGTGGAATGTGTGGTGATAAGA
TGTCTACAAAAATACCACCAAAGTTGGAACCAAAAACGTGCCAAGACACT
GAGACGGACGTCTGCAAAACAAAATACCTGTGTGCACACAAAAGAAACAT
CGCAAGCAAGAAATGCCGAAAAACCTGTAAAATGTGTAAAACATATGGAT
CGTGTTATGATTTAGACAGTCTCTGTTATTGGTATAAATTTCAAGGACAC
TGCAAACCAAGCTCAGCTTTTTACAATCACGTGACATCAAAATGCGCTTT
CAGTTGTGGAATTTGTAAATCTTAAATGAGTAAGATGAAATTGGACAATT
TGCCACCTATTTCTTCGGTCAGAAATCTATGTTTGGTATACTTCTTGTTT
CTATCGCAATCTTTGTGGTCCAGCAAAGTAGTATCGCAATCAGTTCAAGA
AAAGACGAAGAAAAATGGGTGGACATCAAGAACGAATTTAGTTTGTGAAG
ATCATCCAACCAGATGCGACTTTTATTGGTCACGTGGTTGGTACACGTGC
AATGTTGGAGGTGCATTATGGGAAAATTGTCCGAAAAGTTGTGGATTCTG
TGGAGATGAGAATGCACCAGATTGCAAAGACCAACGGAAGAGCGGTTGTG
ACACAATGAAGAAGAGAGGTTTTTGTAAAACATACAAGGCTTACATGAAG
CAATATTGCTCAAAAACTTGTGAAATGTGTAAAGCTCAACAAAAACCAAA
GATAGAGCCTGGATGCAGAGACTATGAAGATATGTGTAACCGATGGGTCG
AATTTGGGGAATGTAGAAAAAGTGCTGATGTTCGAAACTATTGTCCAAAA
GCTTGTGGAATGTGTGGTGATAAGATGTCTACAAAAATACCACCAAAGTT
GGAACCAAAAACGTGCCAAGACACTGAGACGGACGTCTGCAAAACAAAAT
ACCTGTGTGCACACAAAAGAAACATCGCAAGCAAGAAATGCCGAAAAACC
TGTAAAATGTGTAAAACATATGGATCGTGTTATGATTTAGACAGTCTCTG
TTATTGGTATAAATTTCAAGGACACTGCAAACCAAGCTCAGCTTTTTACA
ATCACGTGACATCAAAATGCGCTTTCAGTTGTGGAATTTGTAAATCTTAA
ATGAGTAAGATGAAATTGGACAATTTGCCACCTATTTCTTCGGTCAGAAA
TCTATGTTTGGTATACTTCTTGTTTCTATCGCAATCTTTGTGGTCCAGCA
AAGTAGTATCGCAATCAGTTCAAGAAAAGACGAAGAAAAATGGGTGGACA
TCAAGAACGAATTTAGTTTGTGAAGATCATCCAACCAGATGCGACTTTTA
TTGGTCACGTGGTTGGTACACGTGCAATGTTGGAGGTGCATTATGGGAAA
ATTGTCCGAAAAGTTGTGGATTCTGTGGAGATGAGAATGCACCAGATTGC
AAAGACCAACGGAAGAGCGGTTGTGACACAATGAAGAAGAGAGGTTTTTG
TAAAACATACAAGGCTTACATGAAGCAATATTGCTCAAAAACTTGTGAAA
TGTGTAAAGCTCAACAAAAACCAAAGATAGAGCCTGGATGCAGAGACTAT
GAAGATATGTGTAACCGATGGGTCGAATTTGGGGAATGTAGAAAAAGTGC
TGATGTTCGAAACTATTGTCCAAAAGCTTGTGGAATGTGTGGTGATAAGA
TGTCTACAAAAATACCACCAAAGTTGGAACCAAAAACGTGCCAAGACACT
GAGACGGACGTCTGCAAAACAAAATACCTGTGTGCACACAAAAGAAACAT
CGCAAGCAAGAAATGCCGAAAAACCTGTAAAATGTGTAAAACATATGGAT
CGTGTTATGATTTAGACAGTCTCTGTTATTGGTATAAATTTCAAGGACAC
TGCAAACCAAGCTCAGCTTTTTACAATCACGTGACATCAAAATGCGCTTT
CAGTTGTGGAATTTGTAAATCTTAAATGAGTAAGATGAAATTGGACAATT
TGCCACCTATTTCTTCGGTCAGAAATCTATGTTTGGTATACTTCTTGTTT
CTATCGCAATCTTTGTGGTCCAGCAAAGTAGTATCGCAATCAGTTCAAGA
AAAGACGAAGAAAAATGGGTGGACATCAAGAACGAATTTAGTTTGTGAAG
ATCATCCAACCAGATGCGACTTTTATTGGTCACGTGGTTGGTACACGTGC
AATGTTGGAGGTGCATTATGGGAAAATTGTCCGAAAAGTTGTGGATTCTG
TGGAGATGAGAATGCACCAGATTGCAAAGACCAACGGAAGAGCGGTTGTG
ACACAATGAAGAAGAGAGGTTTTTGTAAAACATACAAGGCTTACATGAAG
CAATATTGCTCAAAAACTTGTGAAATGTGTAAAGCTCAACAAAAACCAAA
GATAGAGCCTGGATGCAGAGACTATGAAGATATGTGTAACCGATGGGTCG
AATTTGGGGAATGTAGAAAAAGTGCTGATGTTCGAAACTATTGTCCAAAA
GCTTGTGGAATGTGTGGTGATAAGATGTCTACAAAAATACCACCAAAGTT
GGAACCAAAAACGTGCCAAGACACTGAGACGGACGTCTGCAAAACAAAAT
ACCTGTGTGCACACAAAAGAAACATCGCAAGCAAGAAATGCCGAAAAACC
TGTAAAATGTGTAAAACATATGGATCGTGTTATGATTTAGACAGTCTCTG
TTATTGGTATAAATTTCAAGGACACTGCAAACCAAGCTCAGCTTTTTACA
ATCACGTGACATCAAAATGCGCTTTCAGTTGTGGAATTTGTAAATCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037629XLOC_037629Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059826-proteinTCONS_00059826-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059826-exon-scaffold_331-1491911889:691487..691611TCONS_00059826-exon-scaffold_331-1491911889:691487..691611Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1510915933:691487..691611TCONS_00059826-exon-scaffold_331-1510915933:691487..691611Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1575043694:691487..691611TCONS_00059826-exon-scaffold_331-1575043694:691487..691611Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1491911889:692972..693031TCONS_00059826-exon-scaffold_331-1491911889:692972..693031Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1510915933:692972..693031TCONS_00059826-exon-scaffold_331-1510915933:692972..693031Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1575043694:692972..693031TCONS_00059826-exon-scaffold_331-1575043694:692972..693031Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1491911889:694840..694968TCONS_00059826-exon-scaffold_331-1491911889:694840..694968Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1510915933:694840..694968TCONS_00059826-exon-scaffold_331-1510915933:694840..694968Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1575043694:694840..694968TCONS_00059826-exon-scaffold_331-1575043694:694840..694968Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1491911889:698082..698195TCONS_00059826-exon-scaffold_331-1491911889:698082..698195Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1510915933:698082..698195TCONS_00059826-exon-scaffold_331-1510915933:698082..698195Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1575043694:698082..698195TCONS_00059826-exon-scaffold_331-1575043694:698082..698195Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1491911889:700640..700807TCONS_00059826-exon-scaffold_331-1491911889:700640..700807Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1510915933:700640..700807TCONS_00059826-exon-scaffold_331-1510915933:700640..700807Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1575043694:700640..700807TCONS_00059826-exon-scaffold_331-1575043694:700640..700807Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1491911889:706185..706734TCONS_00059826-exon-scaffold_331-1491911889:706185..706734Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1510915933:706185..706734TCONS_00059826-exon-scaffold_331-1510915933:706185..706734Clytia hemisphaericaexon
TCONS_00059826-exon-scaffold_331-1575043694:706185..706734TCONS_00059826-exon-scaffold_331-1575043694:706185..706734Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:691487..706734 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0378631	0.110768	0.171482	0	1.53182	0.806974	1.36301	1.32161	0.925289	1.06708	0.997371	1.00867	65.2958	79.3954	0.0859997	0.115364	0.255813	0.0874001	142.483	193.406	0.183041	0.107137	0.0868262	0	2.27651	3.55553	0.467261	0.110816	0	0.0428169
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059826 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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