TCONS_00060631 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060631
Unique NameTCONS_00060631
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length923

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060631 ID=TCONS_00060631|Name=TCONS_00060631|organism=Clytia hemisphaerica|type=transcript|length=923bp
NAAAGCCTTTTTCAAGCCTGTTTTGAAGCCAACTCACCTCAggacatttt
taaaattcaagAAGGATGAAAAAGtttttcaGCACGTTAGCGATGTCATC
GGAGCAATGTGCTCATCGTCTTCAAGAGTTGATGCGTATCCCTGGTAACA
GCCAGTGTGCTGATTGTGGAACTGAAGAACCGGAACCAAACTTTGTTTCA
TTGAATCTTGGTTTATTCATTTGCATCAAATGTTCAGGCCATCACAGGGC
CCTGGGAACGAGATTCTCCGTAACGAAATCCATATTGCTTGACACATTTG
ACGACGCCAAAGTCAAGCAAATGGAAGCTGGTGGGAATATGTTAGGTGTA
GAAAAATGGCAAGTAAACGTCCCAAAATGTTGGCCAATTGTTGATAAACA
TTCACCAGATGATCTAATTGAGCAATGGATACGAGCGAAATACGAGCGAC
AAGAATTCACCGAAAATCAAGTGACTGAGGAATTAAGACCTTATTGCGTA
GgTTCGAAGTATGGTTTtctgatgaaaaaaaagaagaaggacAGTAAATG
GCAACGCAGATTTTTCGTCTTATCCGCGGAGGAAGGATATCTCAAAATGT
ACATCAAACAAGGGGACAATGAACCTAAACACAAGATTAGCATCAGTGGA
ATTAATTTAATGATGGTTCATAGTGACGTCACCGGAGAAAAACATAGCAT
GCTAATCACTTTTCCCATCATGCAAAACAACCAATCGAAACAAAGGCATA
TTTATGTATATGCGGACAAAAGTTTTGAGATAGTTGACTGGTATCTAACA
ATTCGTGGAGCACGCCTGAAATTCTTAACACCCTATTTATACGAAGTTGA
ACGTCCAGTGgtTGACTTTTTGCAATCAAGGAAATTTATCAAATCAGGAT
ATCTACACAAAACTGGAGGCANt
Run BLAST on NCBI

transcript from alignment at scaffold_348:148658..166890+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060631 ID=TCONS_00060631|Name=TCONS_00060631|organism=Clytia hemisphaerica|type=transcript|length=18233bp|location=Sequence derived from alignment at scaffold_348:148658..166890+ (Clytia hemisphaerica)
NAAAGCCTTTTTCAAGCCTGTTTTGAAGCCAACTCACCTCAggacatttt
taaaattcaagAAGGATGAAAAAGGTATGATTTATTGAGTGTACTACCTA
CTTCgtcccccctttcttaaggggggatgACGCCTTCCGGAAAAATTTAG
AAGAGGGGGGGGTTcagaaattttcctgaaaaaagggGTTGATAGCAAGG
AAGGAGGgatagtttaagaagggggcttacatatatattgtagattattt
gcAATCACtgctatgaaatttggtcttcatgaaagAAAGTTTTCTGTAGT
TATAGTCTgggtcaaaaagaagaaagatgttTATTAAttcgctttctctc
tctaaagatatttcatatatttgttagctatttgtTGTCTAAAATCCTTG
GGGGATGGACATTTTTAAAGGTTATGGGGATGTCAAGAAGGGGGATCAGA
CCTCTTTCCGCAATATGTACTAAACACGAACATGTAGGTTATACTCTGTG
gcatttttaaaatatatacaGATAGTATTTTTCATTCAGAATCGCACTTT
TGCACTTGTTTGTAGTTTAAACTCTCCGAGattgaaaattcaatttcata
tttATAAACAAACCGTTTTATTCTTATATAACTAAACTCAATTCGAAAGC
TGACTGAGTGCTTATTAAAATAATCAGGGAAATTCCTTGGTATAAAACAT
TACTTTCGTCACATGTGGAGATACCATAAAAGAGATGGCTTTAAAATTCG
ATAAAGAGTCCTGAGAAAGAGTTAGCTATAAGAGTCCCTTATATTTCAAA
TAGATTTAGGTTTCCCACTTTACGATATTAGTTCTTGATAAATATTTAGT
TTCCAGGGAAAAGATCTTTTAAAATTAAGTAAGGTTTATAACTCAAAAAC
CTTTGTCGCTTTTCGGCTTTAAGCAACCTGCATATCACTTTAACAAAGCT
GTAAATACCTTTTTGCAACTATCGAGACTGCAGTATAGTGCCAGAATTAA
TCTTAATAATCAACCGAAATAGAAATCATAGAgtagatgacgtcatttaa
atagAGGATTTGATATTCCTTCGATACTATTAAGAAGCCAGAAAGGTTAA
TCAAATAGCATAAAGTCGATTTTTCTCTATAAATGATTGAGAAATGAAAA
TCGAGGATTAGAAAGGTTAGAACTCTTTGGAGACATCTCAGTAGCAGCTG
ATCAAAGGCTAACGAAAGGTAATCATTTCTTCAACGCATCTGAGAAGCTA
AAGAAGTTGTATGGATTCTTTGCAAGAACTTTTAGACAGCCCTGTAAGTA
CGTAATACTGAGTTTATGTTTGTGtatttttctgcgacggagacggtaag
gtttataatttgagtagatcctgaccagctgaggacgacggtaaaacagc
acttttaccgtcctcgattttgcaggtcaaaactacgggttattccaaat
cgcttcagtcactttaccgtcctcaaaaatgcaaatacataaactcacta
atAATTTGGATAGCTTCAGTTGAATTAACCCAGGGATATTTAGAAAACAA
ATCTCCGTGTATCAGTTCGGGAAGTTCCATAGAATCGCAGCGCTGCGGAA
TCCCGAAACTTTATTGTGTCAAATTCCGCAACGTTGTTGAATTTCACCCC
AAGAACGGGGTCACACGGGCGATGTTGATGCGTTTTATTGTAAGTGCTTG
TGATAAGATAGTGAGGGATAagtggaaatactgaaaatcgcCCGCGCGCC
TTCGATCGCATAGATATTTCTATGGAAGTGAATTAATGATAGCAATGTTG
TTAATTTTCAATTAATAGGTCAATTAACGTGACCGTACTTGATAACAATG
TTGTGTTGTTTTGAATGTGAAGAATGTTTGGCAAAAAGTAAATAGTTTGT
TATGAAACGACAACTTTGATTGCTGAGCTTCAAATTGAGAATATCATCGT
TTAGTcagttttgatttcatcgtCAGATTGTTTCATTCAGCTCTGGTTCT
ATTTTGATACTAAATACTGAGTGTAAAACCATACAAAACCATTGGGTTTT
TAAGATGCTATAATTTTATACGACCGAGtaaattcattaaaaagttGATC
ATTGAATATTGAGCATATTATTAGGATAGGAGgaattgttttttcatttg
ttggatatttcaaaatgttaaaatttaagAGGATGCTTTCGTCCAGTGAC
AGAGAGAGTCCTGGGGCGAGACGAGGAGTTCGCCGACTTTCCGATCTTGA
GAGACTGAGGATTTATAGACAAAGTCAAACTGATGAGGTTTGCAACGAAA
TTCagagatttattttattttgttttattaaCCTTTCATCTATAGCTTGA
AAATTtgtcccgcgaaaatttcttcccttgagGTATACCCCTGATTTATG
TATGTATTAGATCTGCCTGTCTTAGTTAGAGCTTTTTTCAAACCAAGAAT
ATAGGAGATATACAGTTCTACGTAAACagtcagaaaaaacaaaagatata
TTATCGACAGGTACTGCTCACATCCACTGTAACGATAACGTCAAATTTCA
ATTGAATTGCTTAATCAGCGCGCCTTTTATGCTGACAGAgcagaataaac
aaaatattttctaaaaatctgtGTCCACGCGGTGCGTTAAAGATTGAAAG
TTATTCCTTCTTTTGCTAAAGACTGCTGTGTAAAGGCCGGTCTTCACTTT
CGCGCAatatgagcgaaaactttttgacgtttttgtaaggtcattggtcg
gttgaaaaataaaggaattctattggtcgaaattgacgtggTTACACTAc
attaatatctttaaaatttttgaaattttttaatcaaaaatacattaaag
aaattaactattttctttaaagtcttTTCGAAATGTTGTATcaaatcttc
aatctttttttctcaaCTTATTTTCTCACTCAACAAACGACATGAGTGAA
AGGAGGAAGGCTGCAGCACGTATTGTGCTAATTCTTTTGTAACGGAAATT
TGAGaggaaatattcgaaaaagaaaagtcgAGCTTAAAAGGTCTTGCTGA
ATACGCAAGTGGCTAAAGTTGAGGAACGAAAAAAGTGCCTACAACAACAT
ATTTGCTGAACTTCTTCGTCTACGTGAccaagaagaaaagaagaattctA
TATCTCAAGATGAACACAGAAACTCGTGGCTGATATCCATCcatcatgca
aaatatttctCTTATCTTATCTTTCACCCCTATCTCATATTAGCCATACT
ACGGTTTAAAAATTCCAAACGCTAGAAAATCCATTCATCGAAAAAATGTA
CAGAACTATCATGTCGGTGCCTTTGATCTCGAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGATTATACCGCCAGGA
GAGAGGaaccttataaaaagaaaaacgagaaaaaaaaaacaatagaaaac
ttaggcaaaattaaacaaaaaacaagCTAAATGAGCATTGTGAACAATCA
AAACAACGGACCCTCGAATCGACCAGTATCTTGGATAAATTTTACGGTTA
TACTTATTATATCATGATTTAGGTTGTTACTAAAATTCGAATCCCCAAAG
AGAAGTATTCTGGAGAGTATTCTTGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaagg
aaaaaaggaagCACGATATCGTTCGGTTCGACAAAAGGGTGGCACAAAAG
GAGGTCTAATCCTACGTCTTCCACCAGCATCCTCATCTTCATCAACCTCC
TCCCCCCTCTGGGGAGGAAGGATATTAGAAAGATAAGTTGGCGCAAAGCC
ATTAATTATTTTATAGAAGAGAATAAGTCTGCGGCTAAGTCGCCTGTCTG
CTAGACTTTCAAGACCTAGCTCtagataaattttttctctagaTGTTCCT
CTGAAACATCCTGTTATCGCAAGACAGGCATTGTATTGAATTGATTCGAT
TTTTTCAGAGAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGGTAAATTGTTGAA
TGTAATTACTGGAGGATCTAGGTTTACCCTCCTTGTAAAGAAGACTTCGA
CGGCCTATTTAGAAGGATCAGGGTTGAAggacatcttccattgatgagcc
cactCATTTATCTTCTGCAAGTCACTGTTCAGTTCTTGAGAACAGCGAAT
CTGATCAAGAATCAAGGAAAACAAAGAAGAGTCATCAGCAAATATTTTTA
TCAAGGAAATTATATCTTCGGGGAGATCGTTAATATATACCAGAAAAAAG
AGGGGTCCCAGAATGGAACCCTGAGGAACACCTGCTGAAATCGGGGTCCA
TTCAGAGGATTGACTATCAAGAACTACCCTCTGTGACcttccaaatagaa
aattttggatcAAAAGAAGGAGAGAGCCAGAAACCCCATATGACTTAAGC
TTGAAAAGAAGGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTTGCTTTCTTCCATTT
ATCAGGAAAAATACAAGactcaagagaaaattgatagATCTTCATAAGAG
GCTTAACCAAGGATTCATCGCAAATTTTTATCACCCCTATCTCATATTAG
CCATACTACGGTTTAAAAATTCTAAACGCTAGAAAATCCATTCATCGAAA
AAATGTACAGAACTATCATGTCGGTGCCTTTGATCTCGagagaagtgaag
aaaaaaactttaaactcttTACCAAAAAAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNttattttctttaaaagaggaCTGTTacacttg
taaattttttaatcataaagacttgattaaaaaatttcagaaattttgaa
ataaattaatgtaatgtattcgcgcgaaacttttttatgacgtaatcttt
tcttcaggcaaaaaaggttacgAAAAagctgtcgcccatttcgcgcaaAA
GTGGAGACCAGTCTTATACAAATGAattgaaataatgaaataaaatgtta
tattaccctcttttacaaaaagtgctaagttttaatgggtaattttttga
attgtctgcaaaagattgaactatctaaaaattttctttctaaattgatg
tttcaaaagttataactctttttgtacgaaaattgggatgaaaaattgct
caaaaccaatattttcaagattttgagacaaagaagtttttacaaaaatt
ttccgaaaatttattgttagtttggttaaagatacaccaNattgggatga
aaaattggtcaaaaccaatattttcaagattttgagacaaagaagttttt
acaaaaattttccgaaaatttattgttagtttggttaaagatacaccatc
tagcaaaaatattttcaaaatctttcttcttcgccgaaaataagctcctc
aaagttgaaatacttgtcttcgcaaatgtcttcattttcagattcaggaa
tagtttgtctaacagaaaatgtataacatgccatagttttgtcgGTTATC
AGTCATAAAAACACATTTTATACACGacaatatgaaaaattcacagTGGT
CAAAGCccttaaggaaagaaattttcgtggaatttaatttcgtggttgag
agaggattttttgttgaaaatatggcctatttttcccaaaaaaggccaat
tttataggtgttttttttaatcatgagaatattcgtgtttcgcggaattt
aatttcgcggatttgtcgaaaaaccgcgaaaattgaattctgcaaaaatt
tgttccgcgaaaatttgttcctGCGAAAATTTGTTCTCTTAACGTAAcct
gtattttttcttttttctttagtttttcaGCACGTTAGCGATGTCATCGG
AGCAATGTGCTCATCGTCTTCAAGAGTTGATGCGTATCCCTGGTAACAGC
CAGTGTGCTGATTGTGGAACTGAAGGTTGTCAATATTAATTATCAAATAA
TTGTATCAAATAATTATACCCAGCAAATAATTAAtgtaaattctgtaaaa
atccAGGAGCCCTGGTGGACCAAATAGGACAACAAGAACAATTTTCATTA
TCTACGTTTTTAGCACTTTCCTCTCATCACTTAGTTTCAAATGATGTTTG
TATAATGatcaaaattcattgtttaTGTGTAAAATAACGTCATTAAAAAT
TGGCCCCCAGCAGCTCCCAAGGCTCTTTTAGTCAATTGATGATATTCATA
ACGTAATCTTTTCtaacggaaataccccggttttagccagtagtggtaaa
ttttaactagacaaaagttgtacaAAATTTGCCATTACTGGCAAAAACCA
GGGTCTTGTCGTATGaagcattacgtcatgaatatcatgaattgtatcTC
TCAATAACTACTAGAAGTCTATTTATTGAGACTCAGAAAGCGAGCCGAGT
CAGAAGTAAATTATTAGCCTGTATGCTTATGTCCTTAATCATGTTTCGTC
ATCGTTATTGTTTGTTCAGAACCGGAACCAAACTTTGTTTCATTGAATCT
TGGTTTATTCATTTGCATCAAATGTTCAGGCCATCACAGGGCCCTGGGAA
CGAGATTCTCCGTAACGAAATCCATATTGCTTGACACATTTGACGACGCC
AAAGTCAAGGTAGGTGTTTTAGCTTTTTATGGCAgtgattctcaacaaca
aaattgCCTTAACAAAAAGTTCTTAAGatgttttgtaattttggaggatt
ttttttttcaagagattTCTTCATGTTTCTAGTAAGCAAGTTTTAaaacc
tctataacttgaaCAAGTTTTCGTGTTCCTTCAATTAATAATGCCttatt
ttaaacatattttaaccttggaacaatagaatttttatccctattgagat
ttcaatcgaaattttcatcccaactgtaggaaaaagtttaaccggggctg
tgagacaggggtgtacgaGATGAAAGTATATCATTAGCCCGTTGCTCCTG
CTTCAAGTGCAAGTGTCAAGTGGTAATACCCAATATTCCACAtatcaaaa
taattaaaagaccGTCGAAAAGTCCTACATTACAAGGCTATCTACGCATA
TGTCGACTTTATTTTTCGACTTTGCGTTTCGGGAAGCTTGTTTCTTGAAA
CCAAGTATTTCGAGGAGATAGCGCTTTTCATACCTTTACTTTTACCTCTA
CATATACGTTGAATATTATATGGTTTTTGATGTAGTTTAACATGCCAGAC
GACTAATTAAGAAAAAGTGGGGTATGATAAAGAAATTATATagagccaca
gggttggatagtggcgATCAAATCCCAGTTCCTTCTCTTCTAGTATGCTT
TCTTcaacgttgtggcagaaacgtgtcaaaggtgtggtaactttgtctag
tagaaacacgtagaaagtatacttcttttctcattgttattttagtttct
tcgaCTGGTTCCGTGGTTTTCTTTCACTAAACACATTGTTTTACTATatt
ttatctgtggtggtgtctaattaacactgcttggcGCCTACttacacaac
cctatttccatcatataggaggatattttcgtaAGAGGCCGAAATtctgt
gtaggtcgaaaactgaggaacagattatgtgttttcatgaaatatttttt
tgactcatattgagttatttttttccatcttaactcatattgagttgcTT
TCTTCCTTATATtcattttagatcactagttttgcattgatggatttcta
tgtcatcatattttccttttcaactccgacctgattgattttctgtgaat
gttcattctagatgtTTGTTGTGATTTGtcttgtctttttgttttgtggg
tttggTCTTtagtgtttccattttgagtagttgaaggttttatacttcta
gactatatatatgaCAAAGCAATTCATTATACCGTAACAATTGGTAAATG
GTATTATCGTATAACAACTATTATTACTGTATTACGCGGATTATAAACGA
CTTCAGTCTATATTTGATATTATGTGAAATTCGACACACACATCACATGC
ATATCATATCTTGTTTACATTACGGAGACATATTTCCAGTTCTGTCCTGT
CTTTGAATTTAAGGGATATTCGACCAATTGATACCGTAGCAGTGTAAGCA
AAATAGACATACATATATAAACTCTTGGATAGAAATGGAACAGTGTGGGG
TTCATTAAGGATAAGTATAAAAGCATCAGTAGATTCAATAATTGCAAGTC
CAATCGCCTCGCGATTTGTATACAATACGCAGTCAGCCACCAAACCAATC
AAAAATTTCTTACCGAAAGTTTTGAGTGATGGACAGATATTTTAATCTCT
AGAGGAGCAGGATTCAGACTAGAGGAGCAGGCTTCAGAAATGACAATGGC
GAAATTATTACTATCCATCCACGTATTTGTATACATTTGTTCACTAACTG
TTATCACAGTATGGCTATTTGGTAAAAAACACTCAACATTCAAATTAGAG
TTTGGGGATCAATATGGAAATTCTGGGGTATTCGTATCCGGTGTAGTGAA
TCATTATGGTCTTTTCCTATCAGGTATTACACTGTTGAATGTATGGACTA
TCATTGGATTTattgttttaattgttttgCTTCAGAAAACCGGTGCAGAT
TGCTTTAACAAACCTATCATTTTCCTGGTACAGCAAGCTTCGTTTTTACA
GCTACTTTCTTTTGTTACATTAAATTGGATTTTAAGCGATATAAATATTA
ACGATAAATACTATGACTATCAATCAGTTGTTCTTGACTTATTCTTTAGT
TGGAGAGAGACCCTAATACCATTTCTCGGCTTTAATATGGCTCAATTATT
ACTAGTCCTCATATTTATAATCACCGATTACTACCTACACTACAAAACAG
CCAACCAAAACTTACGAGGGGAGCTTTATATTTCTCTTGTCTGTAAAGGT
TTTGTCTTCATCGTAATCAATACTATTGTTGCGTTTTATTACCCGGAGAA
CATTATCACATCGTATTATGCTATCATATTGAGCCCAATAACATTGGGTG
GTCTTGTTATCTACATACTCGCTGTGAAAAGCGCATGGAGGTTTTCCTGC
TGCTGGAGAGATAATGCATTCAACCCGGTATTGGATGATTTTTCACTCTG
GGTTTATTGTGTATTGTCTATAATTCATGGTGCTGGATTGACTTTTTACA
TTACCACGTATCTCAATATATTTGATAAAGGTACGGATCTTTGTTCATCA
CAAAGAGAATGTATATTACAGGCATGGAAGATCAATAATTCTTTAGATGA
TGGAGATTTACTGCTTTCTTTCGTTTTGATTGCTCCCTTGCTTAATGTTA
CACTTATACTAGCAATCGAGAGGAAATTCCGACAACAAATTTTCTTATAC
TGTGTCTGGACTAGCGATGTTCTGTCTGAATATTGTTGCAGATATCAGGG
TCCTGAAAATCCAGAACAAGATCCGCTATTACAGAATGGGGAGCACAATC
CAAGATATATGGCTGAAGGAAATATTGAAGCTAATCAAAATAATGATCCA
CACGAGGATAGACATGAGAGAGGAATTGAACCAGCGAAGCGCCCTGATCA
GCCAGATTTACGGCAGCCGAGGAACATTTTGGTAGACAAGGTTATCCCAG
TACAAGAAACGAATCAAAACTCACAATTATATTCTGAATGCCATAATCAA
CTAAATCATGATTATGTACAGGGTAAACTCGAACCGACCACTTCAGAACA
CCCGCCCCTTACTGAAGAACACCCACCGCCCACTACAGAACACCCATCGC
TTACTGCAAAACACCCGCCACCCACTACAGAACACCCACCGCCCACGGCA
GAACTTCCACCGTCCACTACAGAACACCCACCACCCACTACAGAACACCC
ACCGCACACGGCAGAACTTCCAACGCCCATTACAGAACACCCACCGCCCA
CTACAAAACACCCGCCGCCCACTACAAAACACCCGCCGCCCAGCAACAGG
GAAGAGAATTTTCATGGCTATCACACTGTTTCTACACAAACTGAAAGCCA
TGAAGAAAACCAGAGAAACGATACAGGACAAGTTCATTCTGATATTACTG
TTCGACTTTATCTTCACATTTAGTTAAAAATGATCATCGACTTTGATCGT
GCATACAAAACCACCAGATCCTGTTATTACTGTTGGTTATGTGTTGTAAT
ATGTGTACCAATTTATGATAAATTCTTGTTAAAATCTCATCTATTATATT
CATAATTTGTATGAATTGTCTTAACATTTTGGAAAGAAAGTAAAGTTGAA
ATTTCAAGTAGAACCTTTTAGTAAAGAATTTCCCAACAGAACTCTTTAAA
AGCCAAATACAGTGTGTCCGTGAAACTCCTcaagataaaaattttttaaa
tatgctCCGCTTTTTCTCTTGTCTGTACacacaatttcaaaattcattgc
cgtagagggtctgttgtcattgtcttttctcatttgagatttttcaaatc
ggccgctgcgatggagtgttggcgAGAGAGGGGAGaggatgagagaagtg
ttgctatttattaATCATACTTTACCCACGTAtgggaatttttttaatca
aacagacaatgtgcacagagtgtactacgaagcgataaacgtgagtgTAT
ACTCTGGTACAGATTACTTTCTCTCCAGACACACTGTAGATTTATATGAG
ATTTCGACACTCCCTGGCAGCAAAGTGGCTTTTTTACCATTAatatcttt
ctcaaaaattctCTCTGGCAAATTTTCCCGATTTTATCAACCCTGTGAAA
TCCCCTGCCGTGGCTTATTCTAGTGATTTCTGATCCATAAGATGAATACT
ACTTAAACCGTTTGCACATCAAAATCATCCAAATATCAAAACTCATTAAT
AATAcagaaatttctttcattgtaccttatcggccaaaacttagttggNG
ATTAATAATACAGGAATTTCTTTCATTGTACGTTATCGACCAAAACTTAg
ttggccctaagtgactaaattttgacttggtgactaaaattagggccgac
taaaaatttagaaatagccaaaacttagttattagtcgacccttagtgac
taaaattagggccgactaataattataaggccgactaagttttggccgat
aaggtatcccTTATACACCTAACTTCACAGCCAAATAGGCTTACAAAACC
CCATCCATCCAAAAAATtatattacattttatttttctagCAAATGGAAG
CTGGTGGGAATATGTTAGGTGTAGAAAAATGGCAAGTAAACGTCCCAAAA
TGTTGGCCAATTGTTGATAAACATTCACCAGAGTAAGTGAGATTGTATAA
ATTCGAATAAAAGTCCCTGATGTTTATTTAGAtctagacggcccactttt
cgccctgcctattctaattatgAATTGAAGTTGGCAgaaagttggctgtc
taaagtttatgcattgccctcttttgacatCAATGCGATGTCTGCTTTca
acctttttcaagcaaacaTTTAACTGCCAAATTGCTTACtttaacaatta
gaataggcagggcagaaagtcagTCGTCTAAGCTTGAGCTTAATTATTTA
GTTTTGAGGAGAGCTGTTTATTCGAGGGCACGTTTAAaggaaggggcgtt
tattaaatcattttcaaccaaCGGCAATTTGAAAAGCGACAGGTACCCCA
CGagctacttgtttcaaataaacgagGGGCGTTTTAAAGAATAGTAATAC
GGTAATTTGTTGTTTAGCTATTTGCTCAatctgaaccaaaaaaaatgtta
ataGATAAAATCTTGACAAAACAAACGACTCATAGGGATACAGATACACT
TCGGTCCTTAAATCATCAACCCTTTTAAGGACGGGGGGGTAAATAAAACG
ATTGAGGAAGACCTGCAATTTGGATCCACAAGATCGAAGACGGTAAAAAT
GCGGCTTTAAAGGGATCTTTCGTCATCaagtttttccttaaaattaaTTG
TCTCACCTTCAGTGATCTAATTGAGCAATGGATACGAGCGAAATACGAGC
GACAAGAATTCACCGAAAATCAAGTGACTGAGGAATTAAGACCTTATTGC
GTAGGTAAGGTGGATCATTATTTCAGATCCTAAAATAAGACATTGTTCTC
AATTGTACGGTAAAACAAGTAACCCTCTATTCCATATACTAAGTGCGGCT
AATGTTAGTTAATTATCGGAGCCTTCTAAATTTGCATTTTTACTTATTTT
CAATGTTCGAATAACCTATTCGTTTTGATTGAAAACTATTTTAAGGTGTT
aattttttatggattttcaggTTCGAAGTATGGTTTtctgatgaaaaaaa
agaagaaggacAGTAAATGGCAACGCAGATTTTTCGTCTTATCCGCGGAG
GAAGGATATCTCAAAATGTACATCAAACAAGGGGTGAGAAAGTCTTTACT
GATATAATATTTATCCCAAATCGGGATGAAAAGATCAGTCGGTGCGCCAA
AttgggcagattctcttacgaTAAGCCATGGTCTACAGTGTGCCATGTGT
GGAGGCATTTATAGTATGCATATACTGAAATAGGGATAGTATGTTAAAGG
ACATTTTGGACTCAAAATTACCAAAACCAGCCTCTAACTCTTATATAAAA
TACATTACACATTATATCGGGAATAAagaactacacgtttttttttatat
aaggaacacgtttataaggaactcgaggctcaaaatggttcaaaaaataa
ggaattgtttaggaactgctcatgctgagaataagaaaacaagttttaag
gaacagtaagagatggttatccaaacttagcagctatgtaaataaggaac
tcgataaggaactttgaggctgaaattctctgtaaaaataaaaaactcca
ggctcagagcaaagttaaggttccttataaaaaaaaaaacgtgtaactta
CAGCTGCTACACGCGGTGCTTTCAATATTTGCtcgaatttttcgaatttt
cttgaaCACTTTGTGATTCTACTTATTTGACTGTATTATACATCCCATTC
ATTTATTTTCCTCTTCATAGGACAATGAACCTAAACACAAGATTAGCATC
AGTGGAATTAATTTAATGATGGTTCATAGTGACGTCACCGGAGAAAAACA
TAGCATGCTAATCACTTTTCCCATCATGCAAAACAACCAATCGAAACAAA
GGCATATTTATGTATATGCGGACAAAAGTTTTGTAAGTTAGGACCCAGAT
CCTTTACTTTGCTTCGTTTGACTGTTTCAATCAGCAAACATTTTTACATA
GGGTTACCATATAGTGGGTATCAAGCCCCCCTTAAAATGGCACCCCCCTC
TATTTTCCAGGTTTCAGTTTAACCCCCTCTTTTTTCGACCTTTTACTCAC
AAACTCTTACAATTTCTAactataaaaataataattgttgagaaatttaa
aaatgaatggaaaacaAAGACACTCTTTTGTAAATTGGCAAATCTTCCta
gccccccccctaaaaaattaacccccctctttttttgtccaagccacccc
ttttatttggaatttttacaagatcatgttcagacgttacagatgaaaat
agtggagcgaagtcttttcgatctgttttgctttgtagcGTCTTCTATTT
TGACGTTTCCActtttgacgttcacacagtGTTTCGGAACTGTTTAGTTT
TGGAGCAAAACGGAACGTAGCGGCTGAACGTGGTGTttgaccactcggcc
atcgctcCTAATAATAACACTGTTGAGGATATGACTCACTGCGATGTAAC
AGAATTTAGACTTGCTCTCAATGAGAAAATAATAAAAGTAGAACATTGGG
TCCCAATGACACCATGCTTCTCAAAACTTAACTTATTTACATTGGAcatg
atcaaaagttattcagCCAGCAGTAGACTCCAAAATTCCTTAATTAACTT
TAAACAGGGTACCCAAAGAAATcctaaatttaaaattattattttgaaga
tttttaggGTTCAGTCCCTTGTAAATAGCGCAACAACTTCACGGTGATCT
TTAATCGGATTTAGCGGATTAGAAAAATGCTTAAATTTGGTCGTAAAGAA
AGGGAGGGTATTTGATAGGGAAGTAAAAATTAGTTGTGCTCAAATTGTAC
ACATATGCGCTTTATTTATTAAAAGGATAGGGTCGTTTTGAAAAGTTACt
ttgaaattattacaaaaattaaactttaaatttcccagattttcaaaaat
tattctgAAGATCGCGGTGCTTCCGCAACTCAAAAAtagttaaaggtttt
tttttaataagagtgatatcctTTGCTTACTCCCATCAAATTTAATTCAc
aagatttttggacctacctggaggtcctataaattaacctttgttcgtcc
gtccgtccgtccgtccgtctgttaccagcttttctcgagattggttcatt
agttttttctgatttttggcacaaagatgcaaaatggcaatgcccaaaat
gtgacggagcccgattttcgaaaaaaaaaattttccggccgaaaatgccg
gaaatatgccggaaaaaccggtttttttgacattttctcgagatttcatc
attagttttttctgattttttgcttaaagatgcgtattaacaatgcccaa
aacatggtcaagtccgaaaatgccggaaatatgccggaaatcaccgtttt
tctggattttcattagactttttccatataattggttgttttttcattca
aaaacattattaatagcaatgcccaccatcaagcgtgtttcaattttcaa
taaaattgatttttaaagccGGAACTATTAAAAAATCACCGGAataacct
attttcgccggaaagacagtatttcttgaatttctcgagctgtactttat
atttttttatgaaattttgcacactgatgcaaaatgacaatacNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgacggagcccgattttcga
aaaacatttttttccggccgaaaatgccagaaatatgccggaaaaaccgg
ttttttttacattttctcgaattttcatccttagttttttctgatctttt
tgCAGAAatatgcgtattcgcaatgctcaaaacatgacagagttcgattt
tttgagaaaattttttttacagccgaaaatgccggaaatatgccggaaat
cgccgtttttgcagatttttattgggctttttcctaacatttctttgttt
tttctcaaaaaaaaaacatcattgatagcaattcccaccatcaatcatga
ttcgattgtcaataaaactgattttttttttctcaaagtagaaaatgtca
cggtagaggcgatggtttgagttttctagaaaccttatttattaagctgt
gtaTTTTCTGAaagtggattgtttttataaagaaaagcgtttataATAAT
TTCTTTTAGCTTTTTCAATAATAGGGCTGATAATTTCTCCCAATAGACAT
Gctttcattatatattttttattttgtccagttatgtcttatgtgtttca
ttgtttcaatgttcattgattagttttgataaccaggtaggtccataaaa
gtatcacttgttcacattggattgacagggatgtggagcaagattcgTCA
GAAaggggaaaagaaaaatattttttgcttatagcagacactgtcctgat
ataagatatgtgtctgatatgaaacgggaacataCTTATGtaagataaaa
cctttaaaatagtATATATCATTTTGATGTTTCTTTCAGGAGATAGTTGA
CTGGTATCTAACAATTCGTGGAGCACGCCTGAAATTCTTAACACCCTATT
TATACGAAGTTGAACGTCCAGTGGTATGTGATCATTTCTGGACTAAGGTC
GTCTTTTAATATGGGCGTGGACTGATCTGGCTATTAGCTATTCGtgatat
ttatgacgtcatgTTATTTACGGAAGCACCCATAAAAGACCGggtgtttg
ccactaattttgacTTTAACAATTAAACTAGTGGCAAACGTACGGATTAT
TTTGAGTGCTTTCATATAAAATATTACGTCACGAATAACATGAATTGGCT
ACATGGCACGTCACtttgtttgacgtcaaaaagtttttcagcCAATCTCC
ATCTATTAAagcatggaattattatagacactggaaaaacaatgagctga
tttttgccaatttctcatgtacaagccttgtccgcagtaatgacattatt
gttcaccctccttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTGAGATTCAAACTCGtcta
gttaattactaattatacgtcgttctgacgttttaaatttcgagaaagat
ggaaaaacatgttatgtataagaaattgaatgttaacaccagaaattttt
aaacttcaacctcaaaaaatccaccATGCCACCaccgtgccaccaaaaga
ttttcagaccacagtggagctatgagactcacatctaatatatgtcaatc
tcagctcttctagGAGatatattggaaagatattcccaattcaaaattcg
tgtcattataagcattttgtttgattttactcatctgatgatttttttct
cacatcagatttcataaatgtatccgtttggtattctagcatttattttc
aaacttttggccagcaaaagtacgaatagaaaaagttaaaaaacttttta
gaaattagagtattaatcatttttcaaaatcagagtccttcgcgccgcca
tgacagttgtcctttgcggataaagctagaacatcaattgttttctgaaa
caatagaaagacaatacttctctctccaccgtttcatttgatgtttatcc
agagtctctataacaAATCCATGATTAAAGCTACTATTTCCAAACAGACT
TATTTAGCCAGGCCAGATAGGccagaaagaaaaacattttttaatacCTA
CGTTACCAACGTTTGTTCTTATTCAGCAAATTCTAGTGCCGTGGGAAGCA
TTTTAATATGGAGGGCTGAGGTATAGTGACACCGCAAAAGCTAACTGTTG
AggggattttgaaaatttaagttCCAGACGTCCGGAAAATGtacttaaaa
tgaaaatttatttcgagAAAGCTTTTCTCAAGAAAAGTTATTcgtggaaa
aataaaaaaaagtggtTTGAGTCGACGTTCCCTTTATAATGCTACTTGCA
GTCTAAAGTTTATGCTCTCTTTTTAACCAAGCATACAGATGATGatcata
gttttttttaatttttctaggtTGACTTTTTGCAATCAAGGAAATTTATC
AAATCAGGATATCTACACAAAACTGGAGGCANt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038134XLOC_038134Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060631-exon-scaffold_348-1491911889:148658..148731TCONS_00060631-exon-scaffold_348-1491911889:148658..148731Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:148658..148731TCONS_00060631-exon-scaffold_348-1510915933:148658..148731Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:148658..148731TCONS_00060631-exon-scaffold_348-1575043694:148658..148731Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:155230..155332TCONS_00060631-exon-scaffold_348-1491911889:155230..155332Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:155230..155332TCONS_00060631-exon-scaffold_348-1510915933:155230..155332Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:155230..155332TCONS_00060631-exon-scaffold_348-1575043694:155230..155332Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:155877..156016TCONS_00060631-exon-scaffold_348-1491911889:155877..156016Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:155877..156016TCONS_00060631-exon-scaffold_348-1510915933:155877..156016Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:155877..156016TCONS_00060631-exon-scaffold_348-1575043694:155877..156016Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:160598..160689TCONS_00060631-exon-scaffold_348-1491911889:160598..160689Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:160598..160689TCONS_00060631-exon-scaffold_348-1510915933:160598..160689Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:160598..160689TCONS_00060631-exon-scaffold_348-1575043694:160598..160689Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:161370..161461TCONS_00060631-exon-scaffold_348-1491911889:161370..161461Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:161370..161461TCONS_00060631-exon-scaffold_348-1510915933:161370..161461Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:161370..161461TCONS_00060631-exon-scaffold_348-1575043694:161370..161461Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:161678..161790TCONS_00060631-exon-scaffold_348-1491911889:161678..161790Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:161678..161790TCONS_00060631-exon-scaffold_348-1510915933:161678..161790Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:161678..161790TCONS_00060631-exon-scaffold_348-1575043694:161678..161790Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:162428..162589TCONS_00060631-exon-scaffold_348-1491911889:162428..162589Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:162428..162589TCONS_00060631-exon-scaffold_348-1510915933:162428..162589Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:162428..162589TCONS_00060631-exon-scaffold_348-1575043694:162428..162589Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:165147..165230TCONS_00060631-exon-scaffold_348-1491911889:165147..165230Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:165147..165230TCONS_00060631-exon-scaffold_348-1510915933:165147..165230Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:165147..165230TCONS_00060631-exon-scaffold_348-1575043694:165147..165230Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1491911889:166828..166890TCONS_00060631-exon-scaffold_348-1491911889:166828..166890Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1510915933:166828..166890TCONS_00060631-exon-scaffold_348-1510915933:166828..166890Clytia hemisphaericaexon
TCONS_00060631-exon-scaffold_348-1575043694:166828..166890TCONS_00060631-exon-scaffold_348-1575043694:166828..166890Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:148658..166890 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.35931	0.000278283	0	0	1.97667e-05	4.84373e-05	0.000252219	0.786814	4.2859	11.0456	1.03813	2.73021e-06	2.67277	0	0.00458026	0.00100181	5.55211	2.49396	1.54144e-07	0	3.14926	4.65043	3.35074	6.6456	2.76313e-07	0.118905	0	0	3.39545	3.03097e-07
Blast
[Close]
BLAST of TCONS_00060631 vs. Swiss-Prot (Human)
Match: ADAP2 (Arf-GAP with dual PH domain-containing protein 2 OS=Homo sapiens GN=ADAP2 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.688e-46
Identity = 106/275 (38.55%), Postives = 154/275 (56.00%), Query Frame = 3 
Query:  102 EQCAHRLQELMRIP--GNSQCADCGTEEPEPNFVSLNLGLFICIKCSGHHRALGTRFSVTKSILLDTFDDAKVKQMEAGGNMLGVEKWQVNVPKCWPIVDKHSPDDLIEQWIRAKYERQEFTENQVTEELRPYCVGSKYGFLMXXXXXDSKWQRRFFVLSAEEGYLKMYIKQGDNEPKHKISISGINLMMVHSDVTGEKHSMLITFPIMQNNQSKQRHIYVYADKSFEIVDWYLTIRGARLKFLTPYLYEV-ERPVVDFLQSRKFIKSGYLHKTG 917
            E+   RL EL+R P  GN+ CADCG  +P  ++ S  LG+FIC+ C G HR      S  KS+ LD +DD+ V+ M   GN+    K++  VP  + I   +    L EQWIRAKYER+EF  +  T  L     G++ GFL K+ + +S++ RR FVL A EG LK + K+    PK  ISI  +N     ++  G  H + IT+          R+++VY +   EIVDW+  +R ARL++L     E+ E  +V FL +R ++K G++ KTG
Sbjct:    5 ERNKKRLLELLRAPDTGNAHCADCGAADP--DWASYKLGIFICLNCCGVHRNFPD-ISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERREFMADGETISL----PGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISIKDLN-ATFQTEKIGHPHGLQITY----RRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAFPELPESELVPFL-TRNYLKQGFMEKTG 266
The following BLAST results are available for this feature:
BLAST of TCONS_00060631 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADAP21.688e-4638.55Arf-GAP with dual PH domain-containing protein 2 O... [more]
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