TCONS_00060789 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060789
Unique NameTCONS_00060789
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060789 ID=TCONS_00060789|Name=TCONS_00060789|organism=Clytia hemisphaerica|type=transcript|length=3151bp
ACTTTGATTGGACGCACACCATTTGATTGTTTTCCAACTCGAGAGAAGAA
GGCTGGGAACAAGAAAGCTGGCCAAGACATGTCATTTAAAGGCTTTACCC
AAGAACAGGTTGAATCTTTtagacaagcattttcagtctTCGATCGTGAG
AATCAAGGAAGTATCACTTCAAACGATTTATTGATCGTCATGAGGAATTT
GGGACAAAATCCAACTCACGCTGAAATCAAAGAAATGATCGCCGAGATTG
ACGCTGACGGTAATGACAATATCGAGTTCGATGAATTTATCACAATAATG
GAGACAAAGTTACGGAATACGATTCCTGATGAGCACGTGCTCGAAGCTTT
TCACGTTTTCGATCGAGATAACAATGGATTTATTTCGCTCAAAGAATTAC
AACATGTGATGTTTTGTTTGGGCGAGGTTCTCCCCATCAACGAGGTGAAG
AAGATTATGGCAGAAGCGGATTTAGATCAAGATGGCCAGCTCAATTAcaa
agAATTCGCAGCTATGATGAGATAGAAGAGACCCTGGTCGTTGTCCGGCT
CCAAAGTAAAGACAAAGAGTGAAGAGAAGTCTATTTATTTGCAATTATCT
ATCTATCTTTTCATGAACACGACTTTAATTTATCATCCAACACGATTGTT
TGCTTTCTTTTCATAAGTTTTCCCAAAaagattgggctattccagaaaaa
aaaaacgtataccccCTGTAGAGGAGGTCCATAcctctgtggctggaaat
gctgtaaccctctggaattccaggcaatttcaggtttaaacccctctgga
attgtgagttttagtaggatttaaaaagctactaCCATTTgcatctccct
atggaattccgccataTATAAAACCTTACCTTCTTGGAATAGCAGggggt
atacgttttttttctggaaaagtccattTGGGGCCTACTTGGGTGGCACA
AAATATATCAATAACGTCCAATGATATTTTAGTGGACACAATTACAATTA
CACTGCGAGActtcaacttttctttttttattttttcttaagcCATTTTA
TGTCAATCAATTTAACGTCCGTTATGAATCTTCAATTTACGTCTTTCTCG
TCTTTTACGGCGCTTTTCCCTCTTTTTTCgcgttttatttattttacgtT
TCGAATGTAGCCTAGTCACTTTTACCCCCATCTCTCTTTACAGTGAAATT
GATCAGCTTCTGAGCTTTCTGTTCTTTGACTTTAAGTCCTTTCAAAGAAA
CAACAAATTTCATCGGTTTCGAAATCACCATAGCACCTCCACCGCCATTA
TTAAAACCCATGGCTGCCGCAGATTGCTCCTGCGTTACACCAGGTAGTTC
TTTACCAAGATtagctgacgtcagcacttcaTATTGCATACCAGCTCCGC
CAGCTTCGTTGAAACCCATGGCTGAAGCTGATTGTTTCTGAGACACCCCT
GGGTAGTCTTGACCAAGGGTAGCGGACGTCAATACTTCATACGGGTTGGG
TCCTGCCGCAGGTGGCAAAGGTCTAACGAATTCGAATAAACCACCACTAC
TGCTAGCACCTGCCGCACCTGAAGCTCCCCCTCCACCCATTGGTTTGGTT
GGTAAATTATATTGCGGATACCCAGTCCCTATAGACTGTATCTTGCTCCC
GCCTTCCACCTTGAGGCTACCACCTCCGTCATGAGAATCTCCTTCCTTAT
AATGTTCAGCATTATGAATCAGGTCTTCAGTACCACCGTGTTCCGGACCG
TGCCCGTGGTGCCCGGAAGGCAAATGAACCGGTTTAtcaacattaaaata
atcattgtGTAAACGCATATTATGGGCGTGTAAACCTTGTAAAGGGTGGC
CGCCTTCAACTGTCATTACGTGTTGTCCGCTTCCGCCCTTGATGGAAGTT
ACCTCGTGTTCTAGGATATCCGCTTGCATGGACATGAGTTGAGCATTTTG
TTTAAGCGCATGCGCCTGAGATAGTAAATACTTTTCTTCGTTCTTATGTG
AAGGGACGGTGTTTGGGATGAGCATGAGGTTACATCCTGGTTGTGGTTGA
CATGGAGCATGCGCAATTGATGTTTGGTGAATGATTTCGTCGCCGAATAC
TGGGCCGTTTATAGCACCGATGTCTGTACGCTGTTGCCCGTTCGATTTCG
ATCGGTTTGTCAAGTGTGAATCTTTTATAGCATTTATGCGTGTGCGAAGT
TGCGCGTTCGATTTCAGTCTATTAGTTAAGCGTAAGTCTTGTTCATTATC
TATGTCTGTGTCTATGTCTCCATGtgttttatttgatttaaagtcttttt
taacattgatATTTATAGGGAGCATTGGCTTTGATTCCtgtatttttgtt
gtttttgagttTTCGCTATCAGAGATGCCTGTGCCAAGCGTAGAGTTCGA
TCTTCTTCTATCTGATGGTAAGAATCTAGGAAAAGTCGTGTTccttttca
attttccaaaagGATCATGTTCATTTTGAATACTTCTATTTTCACGTAGT
CGTGGTTCATACGTTTTCGACTGAATAAACTGTTTTGTGGATAAGTCTTT
TATAACAGTTGTTGATTGGTTATTATTTTTGTGATGACGTTTCGTATTGT
TTGTTGTATGGTTTCTCTTTAGAACAGGGTGTTGTACCTTAGCCTGCAGT
CCATCCTTTAAACCTGTTTCAATACTTTTATCATCGTTCTGTCTTGTCAA
TGTTGTGTAGGCTACATTGGGATCATCTGATGGTCTATGAGCTCCTGATT
CTTCTATATCTTCGTCATCGAAAGGATTTTCGAATTCGTTTTTCGTGGAA
TCCGATATGGCATCAGATGTAAGATTCCTTGTTTCTAGTCTAATGTTTTC
CTCTCGGTCTACATCACAACCGTCGCCATCCTCATCATTATCAGGGTCTG
CATCGTTTTCCTCANATTCCTTGTTTCTAGTCTAATGTTTTCCTCTTGGT
CTACATCACGACCGTCGCCATCCGCATCATTATCAGAGTCTGCATCGTTT
TCCTCGAAAAAGTTGTCCTCCAGTTCAACAAAATGATGATATAACGCTTG
TCGTCTATGGATAACATGTCTGTTGATTTTCATTCGTGCTTTGATCAGTG
ATTTCTGGAGAAGAAATGAAGCAGCCTCTTCTTCGGAGTCCACCTCTGAC
c
Run BLAST on NCBI

transcript from alignment at scaffold_349:466660..475349+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060789 ID=TCONS_00060789|Name=TCONS_00060789|organism=Clytia hemisphaerica|type=transcript|length=8690bp|location=Sequence derived from alignment at scaffold_349:466660..475349+ (Clytia hemisphaerica)
ACTTTGATTGGACGCACACCATTTGATTGTTTTCCAACTCGAGAGAAGAA TATGGTTGAGTTTTTACGTTTGGCCTAtcaattaagaatatgctaagaat agcACCGTCATAGAATTTACCAACATAACCTAAGacgaatgccattttta gagcattttaactgtaaattgcaAATTACAAATTACTCCCATAAGGTTCA ATTAATTTCACAAACATGCTATCTTATGCTTGTATTACATGTTAAATCAA CTTGTATCCTAGAAAAGAATgaactgtaagaatattttagtagCTTAAAT TTTATTTACCCTATTTTGGTTCTAGCAAAAATGTTTTGACTCACTTCGAG TTGCACCATTAGGGCTTATGCCATTTTCAAATAAACTTATATCGTAGACA GCATCCTCAACTAAAAATGTTGAGAAATTATTCTACTTTGTCAGAGGTGC ACATCCAAGAAGTTTTTGAAAGACTTCAACTGACTTTCATTTATCTCCTA TCACTTTTTTACACTGCATTTTTTAACGTGCAAGTACAGAAATTCTCTTT TATTCTGCCTTGTCAGCATTAGGGATtagtcagaaagtatctactaggtg TGGGCGgaagatattttcaaaacttcaaaaaaaaaaatcgcaCCCCCTCC CCTTGATATCGTCAAAAGAATTTCAAGCCTCTCCATCTAACCAGTCAATA TATTAAGTCACCTTTCCTAATATAGGCCACTTAAAATGACATGACATTTT cgagaccccccccccctaagggtgggaaaaactTTTGACATCCCCAACCC TAGAATTCTTCACCCTCCTCctgtagatactttctgaccactcccctAGA GGTGTGTCTCCTTTCTATATCATTTTTATCTTTAAGCACGCTTAATGTTG GTCGcattcccagctgacacacaacgttgtttcaacgttcatgtaacgtt atatggacgttgtgaacgttagataaacgttgaaataacgttgtatGCCA GCTTGGTTGTGTAGAATTATAGACGAATTATATATAATCTTTGACGCGTT AAGCTATTTAGCAAAAGCTTAAATTATTAAGTCGCACATATTTTAACCCC CGGCATGACTGTGAGATTTGACTGTCAAGTTGGCTCAATTATCACTGTCT GTTTATAAATATCACCGTATGAACAGGGGGTTTTATTGAAATCACGGCGA AAGTCTTTATTTGATGAGCACTATGCTAATttttatgacaattttaataa tttctttatgaCTGAAGCTTTTAAGTTTTAATGTTTTATAGAGTATCTCA ATTTCGAATTTTGAGCTTGTTTGATTTTGTAGAAGTTTGGTTTTGATACT AGTGAATACAGGAATGGTAGGTACAGGTCAGTTTGCAGCTCTCGAGCAGT GAAAAGATACCCTTACAGTGaattttaccgaacgtttctgaCTCTTGCAG TGCAGTTTGATTTcttatcttattttgctgaagccacctgaaaatgagat gtcgacacaatgtacaaatcaaatcaaaattggTGCGAGTCGAAACTACT AAAGATATGCATCAGATTTTTATAGTCAGACTTACAATacacacaccctt acagtgtattcaGCTGAACGAAGACCTTCTATCAAAAgtgtacccttaca gtgcatttcgggtctcgaaaaacctaatCTTAAGGGCGGCACGTGCCGTA GGTCGGACCAtataagtgcccccccccccctccaagTTTTTAAACCATTA ATTTCGATTCATTACAGGCTGGGAACAAGAAAGCTGGCCAAGACATGTCA TTTAAAGGCTTTACCCAAGAACAGGTTGAATGTAAGAACTTATTTGTAAT TCTACTTTAAtaggataaactttcgcggggattaaatttcgcggatttcg cggattttggtgccatccgcgaaaatccgcgaaattatttattatatttc taaacaaaactcaaaatatgtcaaacaaATACTATTTCTATGTTTAccgg catcaaagaagcgctaataattgTGTATTTAAACAACCaaaatgcatgat ttgacagtaaaactcacaaaatcgtgaaaatattgccacccaatagtgcc acccgcgaaattaagtccccgcgaaatttttgaatttcgcggataagccc aaccgcgaaatttaatccccgcgaaagtttatcccattaaagcatttctt ctttgattaattcaatctttccttttttcatttttgcttgaACTCATTCA CTCTCTTACTCTTTTGTACCTAATAAACGCTCCCTTCCTTCTCAGGTCCT CCCaataattaaaatttgaaacattttccCTGTCCCCTACCACGTTTATT AGGCAACTGCGAGTAGACAATATTTTATcctttcgttcgttcgttcattc attcgttaatttgttcattcattcattcattctttcaGCTTTtagacaag cattttcagtctTCGATCGTGAGAATCAAGGAAGTATCACTTCAAACGAT TTATTGATCGTCATGAGGAATTTGGGACAAAATCCAACTCACGCTGAAAT CAAAGAAATGATCGCCGAGATTGACGCTGACGGTGAGATTCTTTTTCTGG TCTTAACCCTTCAAACCCGggagacgtgtatacacgtcctGAATTTACCA ATATACTGAGTCCCAGACTTAAGGCTATAACTCTTGATCACTTGATTTAT AAGAGCGCAAGCCGAATGCTtttagaaataaaatgaaaatacctTTCTAA TGGTACCATTTTCTAACTCTCAGAAGCTACAAGTTTGCATATCAGTTCGA AACTTTCacatttcaaaaattgttgggCTCTGGAAAGGTTAAAGAAAAAA CCAGATGAATCGAGTTTCCAAGTCTACAAAATCCTTTTATTCCTCCTGAG ACAACATTCTGAATATAAAtctacatattttttataagcataacacttat aagcatataaaggCTCAGATTTGAcgatttcctaagcataacatataAGC CAAGTCAGCCTTAAATATTTTTCACGTGGTCAATTCTTTTCTGCTCAGAA AGGTTTGGAAGTGGTCAAGTAAAAGGCATTCCGCGACTAGCCACATTCGN AAGGTTTGGAAGTggtcaaaaaaaggaaaaaaggaatTCCGCGACTagcc acattccactgctcTGAGCCTGACCAAGTGGCAGGcacttgcttataaag aaaaggtgtattagaccTAAGTATATTCCTAAACCGAATTGAATTTCTAA AAACTAATTATGAGGTGgattggaataagaatgtccatggttgataatat ttaaaaagttaattAGTGGGGGAATCTATAAAACACCAGAGAGTATATAA GAAAAGGCTTGCTAGGCATATGCTAAGCCCGGCTAAGTTTCAGATAATTA GACTCAAGAATAATTAGCCTGGATGTAGCTTGGTATAGTTAACTGTCATG TTACCTTAAGGTGTTTTAACCCCGAAAATGtttcttcttattttcagcat tttttgatcattttggtcTAATTTGTTAAAACGCATTTGAATTAATATAA TTATTAAGTTCTATCCTTTGAAAATGTTTCTAAGATTTTTGGACATcgaa gcctcgtgttcttataaactttgttcttatataataacGTGTTTGTCTTA ATTCTTCACAGGTAATGACAATATCGATAGAAagactgaaatttgttttt gaggaaaaatattttagattcATCTATTTTTGAGGCCACCGGGCCGATTT AATTTTTGACTTCtaggggccacatactgtagcaagttttatcatttgaa aaatacttttgaattttttaagatttttggagtcgaagcctcgtgttctt ataaactttGTTCTCATATAAAAACGTGTTTGTCTTAATTCTTCACAGGT AATGACAATATCGAGTTCGATGAATTTATCACAATAATGGAGACAAAGTT ACGGAATACGATTCCTGATGAGCACGTGCTCGAAGCTTTTCACGTTTTCG ATCGAGATAACAATGGATTTATTTCGCTCAAAGAATTACAACATGTGATG TTTTGTTTGGGTAAGAAATATTTGTGTCAAGTGTAATGAGGGCTTTAAAC ATTAactgcaattttcaaaaatgcatgaaaaatttcgaaataagctctaa aaacccatttttaccagagccaatgttgtttttattggatttggagAGTT TGGGTGACAAGTCCAGAAGCCAAATCCACTCAAGATTGAAGGAAATGAAT TTGAAGTCCTCAGGCCTTTTTTTGTCTGAGATTGAAGATTGAAGGTTCAA TGAGTTTTgctcttcaactttttcgagaAGACGTCTATCAAGACCATATT TGAAACGTTTAGTTTTCTGCCAAATAACCACTTGTGGTTCATTTGGGGAA TTTCCAAAGTGTCAAAAAGGCTTATTTTGGCACTTTTGAGGAATTTCTAC AGACAGTCTACAGACCTTTTGTTAATGGTTGTGGAAGCTTTTCAAGTTTT CGATCGAGTTAACATAGGGTTTATTTCGCTCAAAGAATTACAACGAAATA TTTGTGTCCGTCGTAATAAGggctttaaagggacataacagtactggcga aatttgtaaacaaactgtatgcagcggatacaaaatcaaaacaaatgtta catgtcaaaataaaaaatcaaaccaaatatggctaattttgattgtccaa ttgttttacaagtttgttttggacacgtgattttaattgctctttttaat gacacgtggttcgcgcaatgttcacattttactactttaatgtcccatTA AAAAAAGCAGCTGGACAAACATAAAGccagtaccttatcggggaaaactt cgtcggggaaaagtgacgaaattttggacaagtgaccaatattttccccg acaaaaattttccccggccttaatgcgtttaccaactaccagcaagtgac gaatttttccccaacGAAAATTTTCACCGACGAAGTTTTCCTCGATAAGG TGTTCTATTTCAATACAGGCGAGGTTCTCCCCATCAACGAGGTGAAGAAG ATTATGGCAGAAGCGGATTTAGATCAAGATGGCCAGCTCAATTAcaaagg tgaaaaaaataacttcaaTTTCAAACTTGAGTTTTCCAACGTGCAAAGGA CCcttcaaaacattttctttcctatgttttaagaaaaaacacgctttttt ataagaatttgtaCTATTAATGTCATGGTTATAAGGGAAATTcgagataa atttcccgaggtcaattttgaaatgttttgaaatttcccgagtgcaacga gggaaatttaaaacatttcgaaatttgaccgagggtaatttatccagaat ttcacgaaaacaagcatgggattcctggttaatctcatggtttggattga aattctaacaattctgaaagacgtcaaattaacactggaaatcaatctga aaatttaaaaagaggtgtcgaaaaagtcatagaaacgcaaatcgagtttt aattggatagtattccatttacttaagcctttgaagttaataagaaagtc gaaaaaggtgatgaatttccaaacgatggaaattacaaaagctaggaggg aaattacaagttcgcggtaaattacaaattaacgtaagcaaaaaagtcaa tcgaatttcaatcaaccatgagattaaaagttaaaaatggcattcttagg tttagTTGTCAAATTCCATGATcctgatattcttagcatatccttaattt ttcgaaagagcatttattgtttttatttttatcacagtgttttcaaaaat gaattgaGGAGACTCATAAAACTACTgaattggaataagcggggggggtt acgctacggtcgaaaaggtgcatTTGAGACTCTGACTTATTTTCTATCTA TGTTTTTAGAATTCGCAGCTATGATGAGATAGAAGAGACCCTGGTCGTTG TCCGGCTCCAAAGTAAAGACAAAGAGTGAAGAGAAGTCTATTTATTTGCA ATTATCTATCTATCTTTTCATGAACACGACTTTAATTTATCATCCAACAC GATTGTTTGCTTTCTTTTCATAAGTTTTCCCAAAaagattgggctattcc agaaaaaaaaaacgtataccccCTGTAGAGGAGGTCCATAcctctgtggc tggaaatgctgtaaccctctggaattccaggcaatttcaggtttaaaccc ctctggaattgtgagttttagtaggatttaaaaagctactaCCATTTgca tctccctatggaattccgccataTATAAAACCTTACCTTCTTGGAATAGC AGggggtatacgttttttttctggaaaagtccattTGGGGCCTACTTGGG TGGCACAAAATATATCAATAACGTCCAATGATATTTTAGTGGACACAATT ACAATTACACTGCGAGActtcaacttttctttttttattttttcttaagc CATTTTATGTCAATCAATTTAACGTCCGTTATGAATCTTCAATTTACGTC TTTCTCGTCTTTTACGGCGCTTTTCCCTCTTTTTTCgcgttttatttatt ttacgtTTCGAATGTAGCCTAGTCACTTTTACCCCCATCTCTCTTTACAG TGAAATTGATCAGCTTCTGAGCTTTCTGTTCTTTGACTTTAAGTCCTTTC AAAGAAACAACAAATTTCATCGGTTTCGAAATCACCATAGCACCTCCACC GCCATTATTAAAACCCATGGCTGCCGCAGATTGCTCCTGCGTTACACCAG GTAGTTCTTTACCAAGATtagctgacgtcagcacttcaTATTGCATACCA GCTCCGCCAGCTTCGTTGAAACCCATGGCTGAAGCTGATTGTTTCTGAGA CACCCCTGGGTAGTCTTGACCAAGGGTAGCGGACGTCAATACTTCATACG GGTTGGGTCCTGCCGCAGGTGGCAAAGGTCTAACGAATTCGAATAAACCA CCACTACTGCTAGCACCTGCCGCACCTGAAGCTCCCCCTCCACCCATTGG TTTGGTTGGTAAATTATATTGCGGATACCCAGTCCCTATAGACTGTATCT TGCTCCCGCCTTCCACCTTGAGGCTACCACCTCCGTCATGAGAATCTCCT TCCTTATAATGTTCAGCATTATGAATCAGGTCTTCAGTACCACCGTGTTC CGGACCGTGCCCGTGGTGCCCGGAAGGCAAATGAACCGGTTTAtcaacat taaaataatcattgtGTAAACGCATATTATGGGCGTGTAAACCTTGTAAA GGGTGGCCGCCTTCAACTGTCATTACGTGTTGTCCGCTTCCGCCCTTGAT GGAAGTTACCTCGTGTTCTAGGATATCCGCTTGCATGGACATGAGTTGAG CATTTTGTTTAAGCGCATGCGCCTGAGATAGTAAATACTTTTCTTCGTTC TTATGTGAAGGGACGGTGTTTGGGATGAGCATGAGGTTACATCCTGGTTG TGGTTGACATGGAGCATGCGCAATTGATGTTTGGTGAATGATTTCGTCGC CGAATACTGGGCCGTTTATAGCATTTATGTCTGTACGCAGTTGCGCTTTC GATTTTAGTGTATTAGTTAACCGTGAGACTTGTTTATCGTCTATACCTGT ACGCAGTTGCGCATTCGATTTCGATCGGTTAGTTAAGTGTGGGTCTTTTA AAACACCGATGTCTGTACGCTGTTGCCCGTTCGATTTCGATCGGTTTGTC AAGTGTGAATCTTTTATAGCATTTATGCGTGTGCGAAGTTGCGCGTTCGA TTTCAGTCTATTAGTTAAGCGTAAGTCTTGTTCATTATCTATGTCTGTGT CTATGTCTCCATGtgttttatttgatttaaagtcttttttaacattgatA TTTATAGGGAGCATTGGCTTTGATTCCtgtatttttgttgtttttgagtt TTCGCTATCAGAGATGCCTGTGCCAAGCGTAGAGTTCGATCTTCTTCTAT CTGATGGTAAGAATCTAGGAAAAGTCGTGTTccttttcaattttccaaaa gGATCATGTTCATTTTGAATACTTCTATTTTCACGTAGTCGTGGTTCATA CGTTTTCGACTGAATAAACTGTTTTGTGGATAAGTCTTTTATAACAGTTG TTGATTGGTTATTATTTTTGTGATGACGTTTCGTATTGTTTGTTGTATGG TTTCTCTTTAGAACAGGGTGTTGTACCTTAGCCTGCAGTCCATCCTTTAA ACCTGTTTCAATACTTTTATCATCGTTCTGTCTTGTCAATGTTGTGTAGG CTACATTGGGATCATCTGATGGTCTATGAGCTCCTGATTCTTCTATATCT TCGTCATCGAAAGGATTTTCGAATTCGTTTTTCGTGGAATCCGATATGGC ATCAGATGTAAGATTCCTTGTTTCTAGTCTAATGTTTTCCTCTCGGTCTA CATCACAACCGTCGCCATCCTCATCATTATCAGGGTCTGCATCGTTTTCC TCANATTCCTTGTTTCTAGTCTAATGTTTTCCTCTTGGTCTACATCACGA CCGTCGCCATCCGCATCATTATCAGAGTCTGCATCGTTTTCCTCGAAAAA GTTGTCCTCCAGTTCAACAAAATGATGATATAACGCTTGTCGTCTATGGA TAACATGTCTGTTGATTTTCATTCGTGCTTTGATCAGTGATTTCTGGAGA AGAAATGAAGCAGCCTCTTCTTCGGAGTCCACCTCTGACc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038191XLOC_038191Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060789-exon-scaffold_349-1491911889:466660..466708TCONS_00060789-exon-scaffold_349-1491911889:466660..466708Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1510915933:466660..466708TCONS_00060789-exon-scaffold_349-1510915933:466660..466708Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1575043694:466660..466708TCONS_00060789-exon-scaffold_349-1575043694:466660..466708Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1491911889:468425..468490TCONS_00060789-exon-scaffold_349-1491911889:468425..468490Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1510915933:468425..468490TCONS_00060789-exon-scaffold_349-1510915933:468425..468490Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1575043694:468425..468490TCONS_00060789-exon-scaffold_349-1575043694:468425..468490Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1491911889:469098..469241TCONS_00060789-exon-scaffold_349-1491911889:469098..469241Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1510915933:469098..469241TCONS_00060789-exon-scaffold_349-1510915933:469098..469241Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1575043694:469098..469241TCONS_00060789-exon-scaffold_349-1575043694:469098..469241Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1491911889:470558..470719TCONS_00060789-exon-scaffold_349-1491911889:470558..470719Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1510915933:470558..470719TCONS_00060789-exon-scaffold_349-1510915933:470558..470719Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1575043694:470558..470719TCONS_00060789-exon-scaffold_349-1575043694:470558..470719Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1491911889:471678..471758TCONS_00060789-exon-scaffold_349-1491911889:471678..471758Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1510915933:471678..471758TCONS_00060789-exon-scaffold_349-1510915933:471678..471758Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1575043694:471678..471758TCONS_00060789-exon-scaffold_349-1575043694:471678..471758Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1491911889:472569..474181TCONS_00060789-exon-scaffold_349-1491911889:472569..474181Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1510915933:472569..474181TCONS_00060789-exon-scaffold_349-1510915933:472569..474181Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1575043694:472569..474181TCONS_00060789-exon-scaffold_349-1575043694:472569..474181Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1491911889:474314..475349TCONS_00060789-exon-scaffold_349-1491911889:474314..475349Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1510915933:474314..475349TCONS_00060789-exon-scaffold_349-1510915933:474314..475349Clytia hemisphaericaexon
TCONS_00060789-exon-scaffold_349-1575043694:474314..475349TCONS_00060789-exon-scaffold_349-1575043694:474314..475349Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:466660..475349 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 1.15489e-06 0 0 0 0 0 0 0.56243 0 0.376642 0 0 0 0.0519842 0.114515 0.13871 0 0 0 0 0 0 0 0 0 0 0
Blast
BLAST of TCONS_00060789 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.762e-46
Identity = 76/142 (53.52%), Postives = 108/142 (76.06%), Query Frame = 1
Query:   94 FTQEQVESFRQAFSVFDRENQGSITSNDLLIVMRNLGQNPTHAEIKEMIAEIDADGNDNIEFDEFITIMETKLRNTIPDEHVLEAFHVFDRDNNGFISLKELQHVMFCLGEVLPINEVKKIMAEADLDQDGQLNYKEFAAMM 519
             T+EQ+  F++AFS+FD++  G+IT+ +L  VMR+LGQNPT AE+++MI E+DADGN  I+F EF+T+M  K+++T  +E + EAF VFD+D NG+IS  EL+HVM  LGE L   EV +++ EAD+D DGQ+NY+EF  MM
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146          
The following BLAST results are available for this feature:
BLAST of TCONS_00060789 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM38.762e-4653.52Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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