TCONS_00060933 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060933
Unique NameTCONS_00060933
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3809

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060933 ID=TCONS_00060933|Name=TCONS_00060933|organism=Clytia hemisphaerica|type=transcript|length=3809bp
tcagtgTTAAAAAGTaaccaacaaacaaaaaaattatgcaatAAGATGCA
ACCCAATGCTAATGTAAAAAGAGGTCTTGCATCTTTCAATACCTCATTGA
AAACTGTGAAAAGCAGGAAAACTGTCATTGTTTTCATTCTGGTTGGTTGC
TTCTTCCTGTACTTGGCTTCTTCTTATTTACTTCCTGCACACAAACATTT
TCATCAAAGCCAGACCAAAGACTCTTCACaagacaaaaagaaaagatctT
GTTTGGAGAACTATCTTGTGCAATGGACACAACTGATGGGCCTCAGTGAT
GCAATCATCAAGAAGATCCCAGCCTCGTCTACTGAAAATCGATTCTTCCC
TTTTTCAGgCAATGGAAAATTAGGCTTTGGCCTAGATAAAGACAAGAAGC
AATTCTATTTGAAGACTGACACACACGGCTACATTCAGTCATTTGCACCC
ACTCTTGACCTCAAGATACAAGAGTCTCACATTGTGGAAGAAAAGGCTGT
GATTATGAATTTGAAAGCTGGACTTGTTATTCTGGCTACAGTGTTTGATG
TTGAGCAAAGCTGTGTCCTTGTCGAGGAAACATTTTTCGCACATCGCCTA
CACAGTGGTCTATTTCAACATGTCATCAAAGTGAAAAATTCTGGACCCTT
CTCCATCGATCTTGAATTATCCACAGCAGACgtcaagaaactgaaaaaaa
ttgaaaaaattcacaCAGCACATCACACTAACGGTCACCTAGCAACCATC
AGtggtgaaatcaaaacaaagcgAAACAAAGAGAACAAAGAGGGCTTGGT
CAAGTTTACATCTGTTCTCTCCAGCGTTGATAACAGGGTCTTGAAAGTAC
CACAGAAAGGTGAAAAAAGTATGAAACTCTTGTCTTATACTGATTTCATC
TTTCTGGAACAAGAGCCGCAAGAAGTTGTGCCACCCACCAACAAGACTAG
GACTGGAAGAGACGTCAAAGATACAGACATCATCGCTTTGACTGAGAAAT
CCAACACCATGCTCAAATCTCTCTCTAAAGATCACGTTCAGGATCAACAT
GTCAAAGCATGGAGTGAAATTTGGACGACTGGTATTTCAATTTCATCAGA
TTCTGACCCAAATTCGCCATCACCATTACACGTCAACTTGACTCAATACT
ACTTATACACCACACACAGTGGTAACTCAAccaaaaaatcaaccaaatcc
GTCAATTGTTACACAGGGCCACCAACTTTACACTATCCAAAACATTGGGT
GGTACCGACTAGTTTGAGCTCTTTAAGTTCATTGATGCAACTATGGGAGG
ATTTCTTTACACGGAATAATTGCCCTATATCTTCTCTCACTGCTTTTTCA
TTACCTCAATTAATGGTATTGACTATCGTAGGCCTACATTATCACAACAA
GCAGCTACAAATGGCTCTCAACCCTTTGAACTTGCGTACCAATATTTCAT
TACGACATGTATCCTTAGACTATTTCCATTCACAAGATCAATTCGATCTG
AAAGTTTTAGTGACCAATATCAAAACAGAACCGTATCAAATTTATGTTAT
GAATAATGGTAAACATTCGCCGAAGATTTTCGGTTGTGGTAGTGCGTGTG
AGCACGTTGTAGAGTTGGGCAGCTCCAGACTAAAATTCGTGATTCACCCA
ACAGATCCGGTGACTCCTCTTTTTTACATCTCCAGCAACCGGACTCTTTT
GGAGAAGATCCACCATTCAGACTTTATGCGAAAAGCAATACATTCTGCGA
AGGAGATCAAAGCGACTGCTCACCATCATCAGCTTTCGCCTAAATTCTGG
ATCTCCGTTGTGGTGCTCATCGTtagttttcatgttattgttttgaaaat
gatataCAATGAGTGTCGGAAGGGCCGGGGAACGGTGCCACGCCGAGGTC
CTTATAGTTAGAAGAGTGTCTCTTTTTATACAAGGTTTTTATACAAGTGA
AATTTAAAATAACCAACATATATATTGGTGCatatattttttgatgaaat
tattgCTGTTGTTATTATCCTTGGAGCTCAGGTGAGTGTTATCGCATTTA
TTAATTAATTATCACAAGAATTTATTTATATAATTGACTGGAGCTGAATT
TTAAGGTCTTACTTTACTAAACAAAATAatgattttacaatttttacccT
TATTAATATTTGCATGcgatattttttttacaaagtgttggtttaaataa
aattatttcgAATAAAGGAAGCAAACTAAGGCCATTCAACTAAGGCCATT
CAACTGGGTATTCCAGAAAATTTACCCACCCTGTCGAGGAGGTCATATTT
ATGGCCCTGGGGATACCTTTAATTAAACCTGGATAACCCAAGGGTTTAAG
TGGAATCTCTTGAAATGGGcagacattttgaaaattggataaGACTCCAA
CGGGTTCTACctcaaaaattgtcaaaaatccaggttgtgtattgaaattc
aattcaaagcaGTTTGGCGTCCTCAACTTTAAAGCTATCTATTTGCAGAG
GGTAAATCCTTGGAACTGATTGTGTGCTGCATTGTGGGGCATCTTTAAAT
GACAAGTTGAATaagttcaaaattgaaaaaaccttTAACTGTGGGTTTTT
GCTATAAAATTGGAATGGAAGTAGGGGAGTTGATACTAAAATCTAGGACA
TCAGGatgtttagtgacgtggtggtatacccaaaaaacttaaaaatcctt
ttagtacaaTTTGAACAatgggtactaaaataccaaaaaggtggtatcca
gaataaaatttgaattttttttagtaaattggtactaaaattagtaattt
tcatgattttattaatctttttcacaaattttcgtGATGTTTTAGTACTT
ACGAGATTTTAGTACCACCCCCCACTGATTGAGGAGGGGGAAACCAGGGA
TACGTTTGATAACTAAGATGTTTTCACAGTTCGTTCGAGAGATAGTATTA
tgcgttttttatttttctaaaatatgatAAATTATGATAATGTGATTATA
GCATGTATAATTGTTCTTTAGggagtttttttttcgaattagtCATTTTT
ACGTGAGGAAGGAAGGTATATATTACATGAGGATCATTTTTAAAGTGatc
aaattgaagaaaatattttatataataCTCTTACAAACCTAAAATACTTG
GTTATTTCTACATCATTTTATGTACAAAACTATTTACAGTATTAAATATC
TGAACTTAAATAATTTGAGCTACAGTAGGTCCCGTAGAAGGAGGAAAACT
CAGTCGGGTAAATCTTTTCGTCCGGGGAGACTTTTGTCGGGGGAAGACTT
CGTCACTTTTTGCCGACTATTTTCTACGATGCCACACACGTACACGTCAC
TTAGAACAAAAGGGATTAATGAATTAGAAGAAATTAATGAATTAGAAGAA
ATNTACGATGCCACACACGTACACGTCACTTAGAACAAAAGGGATTAATG
AATTAGAAGAAATGGGTTTTTTTCTTGGATTCTGTGCAAATCCAATCATT
ATCTATAAGACTTTCTTAGTAAAAGCATGGTAGAGAATGGTTGATAGTTT
AGAATATCACTAAAATCCCCTTCTATGGCTCATTTTTTATTATCTATATA
AAAAATTATCGATGTAccttgaaattcaatgtttgattttttaaacttcA
TTTTCCCTGATATAAAGGGAAATACTGAGTGTTTTATTCTCATACATCAT
GAGGGACGTCGTAATTTCgtctacgatatttgaagtatacAAGCACACTG
ATGGCCACGATCAACAACAAAATTAATCCCACTACGATAAAAATCCAAAC
TTTCGTTCC
Run BLAST on NCBI

protein sequence of TCONS_00060933-protein

>TCONS_00060933-protein ID=TCONS_00060933-protein|Name=TCONS_00060933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
SVLKSNQQTKKLCNKMQPNANVKRGLASFNTSLKTVKSRKTVIVFILVGC
FFLYLASSYLLPAHKHFHQSQTKDSSQDKKKRSCLENYLVQWTQLMGLSD
AIIKKIPASSTENRFFPFSGNGKLGFGLDKDKKQFYLKTDTHGYIQSFAP
TLDLKIQESHIVEEKAVIMNLKAGLVILATVFDVEQSCVLVEETFFAHRL
HSGLFQHVIKVKNSGPFSIDLELSTADVKKLKKIEKIHTAHHTNGHLATI
SGEIKTKRNKENKEGLVKFTSVLSSVDNRVLKVPQKGEKSMKLLSYTDFI
FLEQEPQEVVPPTNKTRTGRDVKDTDIIALTEKSNTMLKSLSKDHVQDQH
VKAWSEIWTTGISISSDSDPNSPSPLHVNLTQYYLYTTHSGNSTKKSTKS
VNCYTGPPTLHYPKHWVVPTSLSSLSSLMQLWEDFFTRNNCPISSLTAFS
LPQLMVLTIVGLHYHNKQLQMALNPLNLRTNISLRHVSLDYFHSQDQFDL
KVLVTNIKTEPYQIYVMNNGKHSPKIFGCGSACEHVVELGSSRLKFVIHP
TDPVTPLFYISSNRTLLEKIHHSDFMRKAIHSAKEIKATAHHHQLSPKFW
ISVVVLIVSFHVIVLKMIYNECRKGRGTVPRRGPYS
Run BLAST on NCBI

transcript from alignment at scaffold_350:22564..28307+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060933 ID=TCONS_00060933|Name=TCONS_00060933|organism=Clytia hemisphaerica|type=transcript|length=5744bp|location=Sequence derived from alignment at scaffold_350:22564..28307+ (Clytia hemisphaerica)
tcagtgTTAAAAAGTaaccaacaaacaaaaaaattatgcaatAAGATGCA
ACCCAATGCTAATGTAAAAAGAGGTCTTGCATCTTTCAATACCTCATTGA
AAACTGTGAAAAGCAGGAAAACTGTCATTGTTTTCATTCTGGTTGGTTGC
TTCTTCCTGTACTTGGCTTCTTCTTATTTACTTCCTGCACACAAACATTT
TCATCAAAGCCAGACCAAAGACTCTTCACaagacaaaaagaaaagatctT
GTTTGGAGAACTATCTTGTGCAATGGACACAACTGATGGGCCTCAGTGAT
GCAATCATCAAGAAGATCCCAGCCTCGTCTACTGAAAATCGATTCTTCCC
TTTTTCAGGTGATATGCTAtgaattgaccaaaatattcgCTTGTTTAAAA
ACTCTCAGTGAAGTTATCAAATCGAACAATGATTGTATTTGTTNGAAGAT
CCCAGCCTCGTCTACTGAAAATCGATTCTTCCCTTTTTCAGGTGATATGC
TAtgaattgaccaaaatatttgcTTGTTTAAAAACTCTCAGTGAAGTTAT
CAAATCGAACGATGATTGTATTTGTCatggaaatctaaaaaaatgcaaac
tgaatttcactttttcctgAGAAAATTACTCTACTTTAATAGAATAGATT
TAAAAACTTGAACTCTTTAAGGAAACTGTCGTGTCGTAAAGTTAtagatt
ttttctttcaggCAATGGAAAATTAGGCTTTGGCCTAGATAAAGACAAGA
AGCAATTCTATTTGAAGACTGACACACACGGCTACATTCAGTCATTTGCA
CCCACTCTTGACCTCAAGATACAAGAGTCTCACATTGTGGAAGAAAAGGC
TGTGATTATGAATTTGAAAGCTGGACTTGTTATTCTGGCTACAGTGTTTG
ATGTTGTAAGTAATCTTTGCATTTTCAAACACTCTTAATTTTCAGTCACT
CTAAATTAGAGCAAGAGACACTCATATTCGTTAAAATTAATTTGACTGTT
CATTAATGTCGAACATTTAGCTTTTGTCAAGTTTGACAATTTTAATTCTG
TTAAAATCCCTGGAAAATTAGGACAGAGAAAACTAATTTTAAACATGATT
TTATCTCTGCAAATATCTGCAGATTGTCTAATATAGGAAACGAAAAGTTT
AAAGTTTCTACACACTATTTCATGAAAACACAGTTTTTTGAAACTGTCGG
TAACTATTTGGCCAGAGACCCTAAAAAATTTATGCTCGAACAGCACTAAT
TCAAATTTCCATCCTCTAGGAGCAAAGCTGTGTCCTTGTCGAGGAAACAT
TTTTCGCACATCGCCTACACAGTGGTCTATTTCAACATGTCATCAAAGTG
AAAAATTCTGGACCCTTCTCCATCGATCTTGAATTATCCACAGCAGACgt
caagaaactgaaaaaaattgaaaaaattcacaCAGCACATCACACTAACG
GTCACCTAGCAACCATCAGtggtgaaatcaaaacaaagcgAAACAAAGAG
AACAAAGAGGGCTTGGTCAAGTTTACATCTGTTCTCTCCAGCGTTGATAA
CAGGGTCTTGAAAGTACCACAGAAAGGTGAAAAAAGTATGAAACTCTTGT
CTTATACTGATTTCATCTTTCTGGAACAAGAGCCGCAAGAAGTTGTGCCA
CCCACCAACAAGACTAGGACTGGAAGAGACGTCAAAGATACAGACATCAT
CGCTTTGACTGAGAAATCCAACACCATGCTCAAATCTCTCTCTAAAGATC
ACGTTCAGGATCAACATGTCAAAGCATGGAGTGAAATTTGGACGGTAAGA
CGgtactttcatttttaattttcgaatTCTCCAAAGCTACAAAGCTACTC
TAATTCATGGTTGAAATGAATGATGGGTAATCTGGTAGGATTGTGCTCTA
ATAACGGCTTTTTGTTGGTTTAAACGTAAAAATTTTAGACCAACTAAAGT
TGTCATCAGGGCCTGGTGGtactgattacccatgatttcTTTCGAATGAA
CAGAAGCCTTTTTGTGCTTTAACTCCATCAAACTCCTCTTATACAAATCC
TTAAAAAGATATTCTAGATACAATGGTCTATTGTGCAGTCATACTCCAAC
ATCCATTTAAAAATGTATTTCTTATTTTGTTTTATAGACTGGTATTTCAA
TTTCATCAGATTCTGACCCAAATTCGCCATCACCATTACACGTCAACTTG
ACTCAATACTACTTATACACCACACACAGTGGTAACTCAAccaaaaaatc
aaccaaatccGTCAATTGTTACACAGGGCCACCAACTTTACACTATCCAA
AACATTGGGTGGTACCGACTAGTTTGAGCTCTTTAAGTTCATTGATGCAA
CTATGGGAGGATTTCTTTACACGGAATAATTGCCCTATATCTTCTCTCAC
TGCTTTTTCATTACCTCAATTAATGGTATTGACTATCGTAGGCCTACATT
ATCACAACAAGCAGCTACAAATGGCTCTCAACCCTTTGAACTTGCGTACC
AATATTTCATTACGACATGTATCCTTAGACTATTTCCATTCACAAGATCA
ATTCGATCTGAAAGTTTTAGTGACCAATATCAAAACAGAACCGTATCAAA
TTTATGTTATGAATAATGGTAAACATTCGCCGAAGATTTTCGGTTGTGGT
AGTGCGTGTGAGCACGTTGTAGAGTTGGGCAGCTCCAGACTAAAATTCGT
GATTCACCCAACAGATCCGGTGACTCCTCTTTTTTACATCTCCAGCAACC
GGACTCTTTTGGAGAAGATCCACCATTCAGACTTTATGCGAAAAGCAATA
CATTCTGCGAAGGAGATCAAAGCGACTGCTCACCATCATCAGCTTTCGCC
TAAATTCTGGATCTCCGTTGTGGTGCTCATCGTtagttttcatgttattg
ttttgaaaatgatataCAATGAGTGTCGGAAGGGCCGGGGAACGGTGCCA
CGCCGAGGTCCTTATAGTTAGAAGAGTGTCTCTTTTTATACAAGGTTTTT
ATACAAGTGAAATTTAAAATAACCAACATATATATATTGGTGcatatatt
ttttgatgattaaTTATTGCTGTTGTTATTATCCTTGGAGCTCAGGTGAG
TGTTATCGCATTTATTCNAAAAATCAACCAAATCCGTCAATTGTTACACA
GGGCCACCAACTTTACACTATCCAAAACATTGGGTGGTACCGACTAGTTT
GAGCTCTTTAAGTTCATTGATGCAACTATGGGAGGATTTCTTCACACGAA
ATAATTGCCCTATATCTTCTCTCACTGCTTTTTCATTACCTCAATTAATG
GTATTGACTATCGTAGGCCTACATTATCACAACAAGCAACTACAAATGGC
TCTCAACCCTTTGAACTTGCGTACCAATATTTCATTACGACATGTATCCT
TAGACTATTTCCATTCACAAGATCAATTTGATCTGAAAGTTTTAGTGACC
AATATCAAAACAGAACCGTATCAAATTTATGTTATGAATAATGGTAAACA
TTCGCCGAAGATTTTCGGTTGTGGTAGTGCGTGTGAGCACGTTGTAGAGT
TGGGCAGCTCCAGACTAAAATTCGTGATTCACCCAACAGATCCGGTGACT
CCTCTTTTTTACATCTCCAGCAACCGGACTCTTTTGGAGAAGATCCACCA
TTCAGACTTTATGCGAAAAGCAATACATTCTGCGAAGGAGATCAAAGCGA
CTGCTCACCATCATCAGCTTTCGCCTAAATTCTGGATCTCCGTTGTGGTG
CTCATCGTtagttttcatgttattgttttgaaaatgatataCAATGAGTG
TCGGAAGGGCCGGGGAACGGTGCCACGCCGAGGTCCTTATAGTTAGAAGA
GTGTCTCTTTTTATACGAGGTTTTTATACAAGTGAAATTTAAAATAACCA
ACATATATATTGGTGCatatattttttgatgaaattattgCTGTTGTTAT
TATCCTTGGAGCTCAGGTGAGTGTTATCGCATTTATTAATTAATTATCAC
AAGAATTTATTTATATAATTGACTGGAGCTGAATTTTAAGGTCTTACTTT
ACTAAACAAAATAatgattttacaatttttacccTTATTAATATTTGCAT
GcgatattttttttacaaagtgttggtttaaataaaattatttcgAATAA
AGGAAGCAAACTAAGGCCATTCAACTAAGGCCATTCAACTGGGTATTCCA
GAAAATTTACCCACCCTGTCGAGGAGGTCATATTTATGGCCCTGGGGATA
CCTTTAATTAAACCTGGATAACCCAAGGGTTTAAGTGGAATCTCTTGAAA
TGGGcagacattttgaaaattggataaGACTCCAACGGGTTCTACctcaa
aaattgtcaaaaatccaggttgtgtattgaaattcaattcaaagcaGTTT
GGCGTCCTCAACTTTAAAGCTATCTATTTGCAGAGGGTAAATCCTTGGAA
CTGATTGTGTGCTGCATTGTGGGGCATCTTTAAATGACAAGTTGAATaag
ttcaaaattgaaaaaaccttTAACTGTGGGTTTTTGCTATAAAATTGGAA
TGGAAGTAGGGGAGTTGATACTAAAATCTAGGACATCAGGatgtttagtg
acgtggtggtatacccaaaaaacttaaaaatccttttagtacaaTTTGAA
CAatgggtactaaaataccaaaaaggtggtatccagaataaaatttgaat
tttttttagtaaattggtactaaaattagtaattttcatgattttattaa
tctttttcacaaattttcgtGATGTTTTAGTACTTACGAGATTTTAGTAC
CACCCCCCACTGATTGAGGAGGGGGAAACCAGGGATACGTTTGATAACTA
AGATGTTTTCACAGTTCGTTCGAGAGATAGTATTAtgcgttttttatttt
tctaaaatatgatAAATTATGATAATGTGATTATAGCATGTATAATTGTT
CTTTAGggagtttttttttcgaattagtCATTTTTACGTGAGGAAGGAAG
GTATATATTACATGAGGATCATTTTTAAAGTGatcaaattgaagaaaata
ttttatataataCTCTTACAAACCTAAAATACTTGGTTATTTCTACATCA
TTTTATGTACAAAACTATTTACAGTATTAAATATCTGAACTTAAATAATT
TGAGCTACAGTAGGTCCCGTAGAAGGAGGAAAACTCAGTCGGGTAAATCT
TTTCGTCCGGGGAGACTTTTGTCGGGGGAAGACTTCGTCACTTTTTGCCG
ACTATTTTCTACGATGCCACACACGTACACGTCACTTAGAACAAAAGGGA
TTAATGAATTAGAAGAAATTAATGAATTAGAAGAAATNTACGATGCCACA
CACGTACACGTCACTTAGAACAAAAGGGATTAATGAATTAGAAGAAATGG
GTTTTTTTCTTGGATTCTGTGCAAATCCAATCATTATCTATAAGACTTTC
TTAGTAAAAGCATGGTAGAGAATGGTTGATAGTTTAGAATATCACTAAAA
TCCCCTTCTATGGCTCATTTTTTATTATCTATATAAAAAATTATCGATGT
AccttgaaattcaatgtttgattttttaaacttcATTTTCCCTGATATAA
AGGGAAATACTGAGTGTTTTATTCTCATACATCATGAGGGACGTCGTAAT
TTCgtctacgatatttgaagtatacAAGCACACTGATGGCCACGATCAAC
AACAAAATTAATCCCACTACGATAAAAATCCAAACTTTCGTTCC

Coding sequence (CDS) from alignment at scaffold_350:22564..28307+

>TCONS_00060933 ID=TCONS_00060933|Name=TCONS_00060933|organism=Clytia hemisphaerica|type=CDS|length=7644bp|location=Sequence derived from alignment at scaffold_350:22564..28307+ (Clytia hemisphaerica)
tcagtgTTAAAAAGTaaccaacaaacaaaaaaattatgcaatAAGATGCA
ACCCAATGCTAATGTAAAAAGAGGTCTTGCATCTTTCAATACCTCATTGA
AAACTGTGAAAAGCAGGAAAACTGTCATTGTTTTCATTCTGGTTGGTTGC
TTCTTCCTGTACTTGGCTTCTTCTTATTTACTTCCTGCACACAAACATTT
TCATCAAAGCCAGACCAAAGACTCTTCACaagacaaaaagaaaagatctT
GTTTGGAGAACTATCTTGTGCAATGGACACAACTGATGGGCCTCAGTGAT
GCAATCATCAAGAAGATCCCAGCCTCGTCTACTGAAAATCGATTCTTCCC
TTTTTCAGgCAATGGAAAATTAGGCTTTGGCCTAGATAAAGACAAGAAGC
AATTCTATTTGAAGACTGACACACACGGCTACATTCAGTCATTTGCACCC
ACTCTTGACCTCAAGATACAAGAGTCTCACATTGTGGAAGAAAAGGCTGT
GATTATGAATTTGAAAGCTGGACTTGTTATTCTGGCTACAGTGTTTGATG
TTGAGCAAAGCTGTGTCCTTGTCGAGGAAACATTTTTCGCACATCGCCTA
CACAGTGGTCTATTTCAACATGTCATCAAAGTGAAAAATTCTGGACCCTT
CTCCATCGATCTTGAATTATCCACAGCAGACgtcaagaaactgaaaaaaa
ttgaaaaaattcacaCAGCACATCACACTAACGGTCACCTAGCAACCATC
AGtggtgaaatcaaaacaaagcgAAACAAAGAGAACAAAGAGGGCTTGGT
CAAGTTTACATCTGTTCTCTCCAGCGTTGATAACAGGGTCTTGAAAGTAC
CACAGAAAGGTGAAAAAAGTATGAAACTCTTGTCTTATACTGATTTCATC
TTTCTGGAACAAGAGCCGCAAGAAGTTGTGCCACCCACCAACAAGACTAG
GACTGGAAGAGACGTCAAAGATACAGACATCATCGCTTTGACTGAGAAAT
CCAACACCATGCTCAAATCTCTCTCTAAAGATCACGTTCAGGATCAACAT
GTCAAAGCATGGAGTGAAATTTGGACGACTGGTATTTCAATTTCATCAGA
TTCTGACCCAAATTCGCCATCACCATTACACGTCAACTTGACTCAATACT
ACTTATACACCACACACAGTGGTAACTCAAccaaaaaatcaaccaaatcc
GTCAATTGTTACACAGGGCCACCAACTTTACACTATCCAAAACATTGGGT
GGTACCGACTAGTTTGAGCTCTTTAAGTTCATTGATGCAACTATGGGAGG
ATTTCTTTACACGGAATAATTGCCCTATATCTTCTCTCACTGCTTTTTCA
TTACCTCAATTAATGGTATTGACTATCGTAGGCCTACATTATCACAACAA
GCAGCTACAAATGGCTCTCAACCCTTTGAACTTGCGTACCAATATTTCAT
TACGACATGTATCCTTAGACTATTTCCATTCACAAGATCAATTCGATCTG
AAAGTTTTAGTGACCAATATCAAAACAGAACCGTATCAAATTTATGTTAT
GAATAATGGTAAACATTCGCCGAAGATTTTCGGTTGTGGTAGTGCGTGTG
AGCACGTTGTAGAGTTGGGCAGCTCCAGACTAAAATTCGTGATTCACCCA
ACAGATCCGGTGACTCCTCTTTTTTACATCTCCAGCAACCGGACTCTTTT
GGAGAAGATCCACCATTCAGACTTTATGCGAAAAGCAATACATTCTGCGA
AGGAGATCAAAGCGACTGCTCACCATCATCAGCTTTCGCCTAAATTCTGG
ATCTCCGTTGTGGTGCTCATCGTtagttttcatgttattgttttgaaaat
gatataCAATGAGTGTCGGAAGGGCCGGGGAACGGTGCCACGCCGAGGTC
CTTATAGTTAGtcagtgTTAAAAAGTaaccaacaaacaaaaaaattatgc
aatAAGATGCAACCCAATGCTAATGTAAAAAGAGGTCTTGCATCTTTCAA
TACCTCATTGAAAACTGTGAAAAGCAGGAAAACTGTCATTGTTTTCATTC
TGGTTGGTTGCTTCTTCCTGTACTTGGCTTCTTCTTATTTACTTCCTGCA
CACAAACATTTTCATCAAAGCCAGACCAAAGACTCTTCACaagacaaaaa
gaaaagatctTGTTTGGAGAACTATCTTGTGCAATGGACACAACTGATGG
GCCTCAGTGATGCAATCATCAAGAAGATCCCAGCCTCGTCTACTGAAAAT
CGATTCTTCCCTTTTTCAGgCAATGGAAAATTAGGCTTTGGCCTAGATAA
AGACAAGAAGCAATTCTATTTGAAGACTGACACACACGGCTACATTCAGT
CATTTGCACCCACTCTTGACCTCAAGATACAAGAGTCTCACATTGTGGAA
GAAAAGGCTGTGATTATGAATTTGAAAGCTGGACTTGTTATTCTGGCTAC
AGTGTTTGATGTTGAGCAAAGCTGTGTCCTTGTCGAGGAAACATTTTTCG
CACATCGCCTACACAGTGGTCTATTTCAACATGTCATCAAAGTGAAAAAT
TCTGGACCCTTCTCCATCGATCTTGAATTATCCACAGCAGACgtcaagaa
actgaaaaaaattgaaaaaattcacaCAGCACATCACACTAACGGTCACC
TAGCAACCATCAGtggtgaaatcaaaacaaagcgAAACAAAGAGAACAAA
GAGGGCTTGGTCAAGTTTACATCTGTTCTCTCCAGCGTTGATAACAGGGT
CTTGAAAGTACCACAGAAAGGTGAAAAAAGTATGAAACTCTTGTCTTATA
CTGATTTCATCTTTCTGGAACAAGAGCCGCAAGAAGTTGTGCCACCCACC
AACAAGACTAGGACTGGAAGAGACGTCAAAGATACAGACATCATCGCTTT
GACTGAGAAATCCAACACCATGCTCAAATCTCTCTCTAAAGATCACGTTC
AGGATCAACATGTCAAAGCATGGAGTGAAATTTGGACGACTGGTATTTCA
ATTTCATCAGATTCTGACCCAAATTCGCCATCACCATTACACGTCAACTT
GACTCAATACTACTTATACACCACACACAGTGGTAACTCAAccaaaaaat
caaccaaatccGTCAATTGTTACACAGGGCCACCAACTTTACACTATCCA
AAACATTGGGTGGTACCGACTAGTTTGAGCTCTTTAAGTTCATTGATGCA
ACTATGGGAGGATTTCTTTACACGGAATAATTGCCCTATATCTTCTCTCA
CTGCTTTTTCATTACCTCAATTAATGGTATTGACTATCGTAGGCCTACAT
TATCACAACAAGCAGCTACAAATGGCTCTCAACCCTTTGAACTTGCGTAC
CAATATTTCATTACGACATGTATCCTTAGACTATTTCCATTCACAAGATC
AATTCGATCTGAAAGTTTTAGTGACCAATATCAAAACAGAACCGTATCAA
ATTTATGTTATGAATAATGGTAAACATTCGCCGAAGATTTTCGGTTGTGG
TAGTGCGTGTGAGCACGTTGTAGAGTTGGGCAGCTCCAGACTAAAATTCG
TGATTCACCCAACAGATCCGGTGACTCCTCTTTTTTACATCTCCAGCAAC
CGGACTCTTTTGGAGAAGATCCACCATTCAGACTTTATGCGAAAAGCAAT
ACATTCTGCGAAGGAGATCAAAGCGACTGCTCACCATCATCAGCTTTCGC
CTAAATTCTGGATCTCCGTTGTGGTGCTCATCGTtagttttcatgttatt
gttttgaaaatgatataCAATGAGTGTCGGAAGGGCCGGGGAACGGTGCC
ACGCCGAGGTCCTTATAGTTAGtcagtgTTAAAAAGTaaccaacaaacaa
aaaaattatgcaatAAGATGCAACCCAATGCTAATGTAAAAAGAGGTCTT
GCATCTTTCAATACCTCATTGAAAACTGTGAAAAGCAGGAAAACTGTCAT
TGTTTTCATTCTGGTTGGTTGCTTCTTCCTGTACTTGGCTTCTTCTTATT
TACTTCCTGCACACAAACATTTTCATCAAAGCCAGACCAAAGACTCTTCA
CaagacaaaaagaaaagatctTGTTTGGAGAACTATCTTGTGCAATGGAC
ACAACTGATGGGCCTCAGTGATGCAATCATCAAGAAGATCCCAGCCTCGT
CTACTGAAAATCGATTCTTCCCTTTTTCAGgCAATGGAAAATTAGGCTTT
GGCCTAGATAAAGACAAGAAGCAATTCTATTTGAAGACTGACACACACGG
CTACATTCAGTCATTTGCACCCACTCTTGACCTCAAGATACAAGAGTCTC
ACATTGTGGAAGAAAAGGCTGTGATTATGAATTTGAAAGCTGGACTTGTT
ATTCTGGCTACAGTGTTTGATGTTGAGCAAAGCTGTGTCCTTGTCGAGGA
AACATTTTTCGCACATCGCCTACACAGTGGTCTATTTCAACATGTCATCA
AAGTGAAAAATTCTGGACCCTTCTCCATCGATCTTGAATTATCCACAGCA
GACgtcaagaaactgaaaaaaattgaaaaaattcacaCAGCACATCACAC
TAACGGTCACCTAGCAACCATCAGtggtgaaatcaaaacaaagcgAAACA
AAGAGAACAAAGAGGGCTTGGTCAAGTTTACATCTGTTCTCTCCAGCGTT
GATAACAGGGTCTTGAAAGTACCACAGAAAGGTGAAAAAAGTATGAAACT
CTTGTCTTATACTGATTTCATCTTTCTGGAACAAGAGCCGCAAGAAGTTG
TGCCACCCACCAACAAGACTAGGACTGGAAGAGACGTCAAAGATACAGAC
ATCATCGCTTTGACTGAGAAATCCAACACCATGCTCAAATCTCTCTCTAA
AGATCACGTTCAGGATCAACATGTCAAAGCATGGAGTGAAATTTGGACGA
CTGGTATTTCAATTTCATCAGATTCTGACCCAAATTCGCCATCACCATTA
CACGTCAACTTGACTCAATACTACTTATACACCACACACAGTGGTAACTC
AAccaaaaaatcaaccaaatccGTCAATTGTTACACAGGGCCACCAACTT
TACACTATCCAAAACATTGGGTGGTACCGACTAGTTTGAGCTCTTTAAGT
TCATTGATGCAACTATGGGAGGATTTCTTTACACGGAATAATTGCCCTAT
ATCTTCTCTCACTGCTTTTTCATTACCTCAATTAATGGTATTGACTATCG
TAGGCCTACATTATCACAACAAGCAGCTACAAATGGCTCTCAACCCTTTG
AACTTGCGTACCAATATTTCATTACGACATGTATCCTTAGACTATTTCCA
TTCACAAGATCAATTCGATCTGAAAGTTTTAGTGACCAATATCAAAACAG
AACCGTATCAAATTTATGTTATGAATAATGGTAAACATTCGCCGAAGATT
TTCGGTTGTGGTAGTGCGTGTGAGCACGTTGTAGAGTTGGGCAGCTCCAG
ACTAAAATTCGTGATTCACCCAACAGATCCGGTGACTCCTCTTTTTTACA
TCTCCAGCAACCGGACTCTTTTGGAGAAGATCCACCATTCAGACTTTATG
CGAAAAGCAATACATTCTGCGAAGGAGATCAAAGCGACTGCTCACCATCA
TCAGCTTTCGCCTAAATTCTGGATCTCCGTTGTGGTGCTCATCGTtagtt
ttcatgttattgttttgaaaatgatataCAATGAGTGTCGGAAGGGCCGG
GGAACGGTGCCACGCCGAGGTCCTTATAGTTAGtcagtgTTAAAAAGTaa
ccaacaaacaaaaaaattatgcaatAAGATGCAACCCAATGCTAATGTAA
AAAGAGGTCTTGCATCTTTCAATACCTCATTGAAAACTGTGAAAAGCAGG
AAAACTGTCATTGTTTTCATTCTGGTTGGTTGCTTCTTCCTGTACTTGGC
TTCTTCTTATTTACTTCCTGCACACAAACATTTTCATCAAAGCCAGACCA
AAGACTCTTCACaagacaaaaagaaaagatctTGTTTGGAGAACTATCTT
GTGCAATGGACACAACTGATGGGCCTCAGTGATGCAATCATCAAGAAGAT
CCCAGCCTCGTCTACTGAAAATCGATTCTTCCCTTTTTCAGgCAATGGAA
AATTAGGCTTTGGCCTAGATAAAGACAAGAAGCAATTCTATTTGAAGACT
GACACACACGGCTACATTCAGTCATTTGCACCCACTCTTGACCTCAAGAT
ACAAGAGTCTCACATTGTGGAAGAAAAGGCTGTGATTATGAATTTGAAAG
CTGGACTTGTTATTCTGGCTACAGTGTTTGATGTTGAGCAAAGCTGTGTC
CTTGTCGAGGAAACATTTTTCGCACATCGCCTACACAGTGGTCTATTTCA
ACATGTCATCAAAGTGAAAAATTCTGGACCCTTCTCCATCGATCTTGAAT
TATCCACAGCAGACgtcaagaaactgaaaaaaattgaaaaaattcacaCA
GCACATCACACTAACGGTCACCTAGCAACCATCAGtggtgaaatcaaaac
aaagcgAAACAAAGAGAACAAAGAGGGCTTGGTCAAGTTTACATCTGTTC
TCTCCAGCGTTGATAACAGGGTCTTGAAAGTACCACAGAAAGGTGAAAAA
AGTATGAAACTCTTGTCTTATACTGATTTCATCTTTCTGGAACAAGAGCC
GCAAGAAGTTGTGCCACCCACCAACAAGACTAGGACTGGAAGAGACGTCA
AAGATACAGACATCATCGCTTTGACTGAGAAATCCAACACCATGCTCAAA
TCTCTCTCTAAAGATCACGTTCAGGATCAACATGTCAAAGCATGGAGTGA
AATTTGGACGACTGGTATTTCAATTTCATCAGATTCTGACCCAAATTCGC
CATCACCATTACACGTCAACTTGACTCAATACTACTTATACACCACACAC
AGTGGTAACTCAAccaaaaaatcaaccaaatccGTCAATTGTTACACAGG
GCCACCAACTTTACACTATCCAAAACATTGGGTGGTACCGACTAGTTTGA
GCTCTTTAAGTTCATTGATGCAACTATGGGAGGATTTCTTTACACGGAAT
AATTGCCCTATATCTTCTCTCACTGCTTTTTCATTACCTCAATTAATGGT
ATTGACTATCGTAGGCCTACATTATCACAACAAGCAGCTACAAATGGCTC
TCAACCCTTTGAACTTGCGTACCAATATTTCATTACGACATGTATCCTTA
GACTATTTCCATTCACAAGATCAATTCGATCTGAAAGTTTTAGTGACCAA
TATCAAAACAGAACCGTATCAAATTTATGTTATGAATAATGGTAAACATT
CGCCGAAGATTTTCGGTTGTGGTAGTGCGTGTGAGCACGTTGTAGAGTTG
GGCAGCTCCAGACTAAAATTCGTGATTCACCCAACAGATCCGGTGACTCC
TCTTTTTTACATCTCCAGCAACCGGACTCTTTTGGAGAAGATCCACCATT
CAGACTTTATGCGAAAAGCAATACATTCTGCGAAGGAGATCAAAGCGACT
GCTCACCATCATCAGCTTTCGCCTAAATTCTGGATCTCCGTTGTGGTGCT
CATCGTtagttttcatgttattgttttgaaaatgatataCAATGAGTGTC
GGAAGGGCCGGGGAACGGTGCCACGCCGAGGTCCTTATAGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038254XLOC_038254Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060933-exon-scaffold_350-1491911889:22564..22921TCONS_00060933-exon-scaffold_350-1491911889:22564..22921Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1510915933:22564..22921TCONS_00060933-exon-scaffold_350-1510915933:22564..22921Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1575043694:22564..22921TCONS_00060933-exon-scaffold_350-1575043694:22564..22921Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1491911889:23275..23468TCONS_00060933-exon-scaffold_350-1491911889:23275..23468Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1510915933:23275..23468TCONS_00060933-exon-scaffold_350-1510915933:23275..23468Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1575043694:23275..23468TCONS_00060933-exon-scaffold_350-1575043694:23275..23468Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1491911889:23833..24357TCONS_00060933-exon-scaffold_350-1491911889:23833..24357Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1510915933:23833..24357TCONS_00060933-exon-scaffold_350-1510915933:23833..24357Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1575043694:23833..24357TCONS_00060933-exon-scaffold_350-1575043694:23833..24357Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1491911889:24701..25557TCONS_00060933-exon-scaffold_350-1491911889:24701..25557Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1510915933:24701..25557TCONS_00060933-exon-scaffold_350-1510915933:24701..25557Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1575043694:24701..25557TCONS_00060933-exon-scaffold_350-1575043694:24701..25557Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1491911889:26433..28307TCONS_00060933-exon-scaffold_350-1491911889:26433..28307Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1510915933:26433..28307TCONS_00060933-exon-scaffold_350-1510915933:26433..28307Clytia hemisphaericaexon
TCONS_00060933-exon-scaffold_350-1575043694:26433..28307TCONS_00060933-exon-scaffold_350-1575043694:26433..28307Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060933-proteinTCONS_00060933-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:22564..28307 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.20238	7.47145	5.51938	5.29197	11.1613	9.32916	7.7291	8.66981	5.45275	6.50461	7.60621	3.77662	4.91574	3.8503	3.36466	4.17553	8.7271	7.97007	3.07416	4.3529	5.34307	4.97428	11.7	13.5123	15.0782	12.7062	7.8312	5.57382	13.1423	15.756
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060933 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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