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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060944 ID=TCONS_00060944|Name=TCONS_00060944|organism=Clytia hemisphaerica|type=transcript|length=5459bp
AGGTCCTAGGGCATAGGGCTAAAACAGTACTTTAAATAGGTTCAAATTCA
TTGTGGTTTTGAAACATTATCAGGTTCTTTAAGGTACTTGACAAAAGCAT
AAATTTCAAGCTTATTTGATTTCACGAAAAGGGCCTAAGAGAATTGTGAG
AATTGTGAAAGTTTCTGTTAACCCAACTTTGTACACTTAAAGTATACTAG
GTCAGTTTGTTTGAAACACACTGTCGGGACCACTTTCTGTGAAAATCAAT
CATAAAgggagagagaaaaaaaattctagtaCTAGTAGTATTCATCAGAA
AATTTTGTTCACTTAGTCCACTTTTGACTTGATCAGTGATAATACTTATA
ATGTGCAATGCAAATTCTTTCCTTCCTGCCCCTAATATTATGAATTGAAA
TTAGGAAGAAGGCCAGAGATAACTTTCAGAGCAACCCTAATTTTCATAGC
ggcagcctgggtttaggtcttAGGCAAAAATTAGAtccccctgagtttta
agtccccccccccaaaGAATTATGGGGCGGGGaccccaggacttttgacc
ctagacactttcaaaaaattgatccagtaaaaaagggttttccaatgtaa
attgcgttcagttctaagtttaagataaaatattttgcacactttctata
aaaatattgcgccgcagacaaaaatttttaagattcatgagcttcaactt
gagtaattgaagcaagctgaattattttagcccccacgttaagtgatgag
attttagctcgcCCCAATTACATAGGTCCAGcaggggggctgacgctatg
aatTTTGGGACCTAAGTGTTCATATTTTAAAGggattaaaaaaatttagg
taAAAAAACTATATACTCAAACCACCTAataagctctcaaaaaactatat
ataaattcacagttttcaatgggctgaaactttttctggtgAATCTAGGC
TACCTTATGATTTTCTTCCCtgttttttatggtttttgttGAGCTGCTAA
TAAAATTTGctatcatttcaaaaaattttccttgaagGGGGGGGGTCCTT
GGAAAAGCGTACATACACGAAGGAGGAGGTAGTTGCAAAAGCGTACACAA
ACGCACAAGGAAGAAGGGTGGAATTTTGCTTGTATTTGAACATACATACT
TTTTGAAAGGTCCCTAAAATAACATTTCAGAAAATAGTTGTTTAGACTTT
CAACAGTGATATATGAATAGACCATATGAATAGACCATGGATGGTAccta
aataattttaaaaaaactttatgaaTTAGCTCTACAAAGAGTATTGAGCA
CTCTTTTAATGGTTGTTCAACAAactcatagtgtgcagaggggtccagcc
cccagcatttttcagggggggctaaggaaaatagcccccggctaaattct
agaaacatagcccccACCTTCACAAAAGGGGTGGCTTGGACAAAAAGAGG
GGGGTtaattttttaagggggggcttggaagatttggcaatttgcaaaag
agtgttttccattcatttttagatttctcaacaATTATTATATTTCCATT
CATTTGAATGAAGCAAAAACTCTGTTTCTACAACTCTTGATGGAGTATGT
TGCTTTTTCAACCTTTGCAAGACAGCTGCGACCGCAAATGGtcgaaaaaa
agaggggggttgaacttaaacctgggaaaaagaggggggttgaataaaaa
gaggggggttgaggaattttcatttttaagaggggggttgagctaaaaga
ggggggggtgccatttttaagggggggggcttGATACCCCTCTGCCCACT
ATGTTCTATGCAAAAAcattataatttcaaaaatatgtgtCCGACATGAC
ATCACCTCTAGCCAAAGGTCCATGGACCTATGTTCAACAAGTTATCACTT
GATGGATGGGAGAGCGTGAAACTTTagttattgttgttgtttcccTTGCA
TCCATTGAAACGTGGAGTTATCGTGATATATGATGTGATTGTTGTGCTTg
agtttttaattatatccAACAACATGACATCGTACCCTATAGTAGCAAAA
AAATTACcgccaactgctctaacttggcttgggactatctgacaaaacat
gggacggcaatttggctttcatttcaccaaacctccaaagtcatttgatt
tgagttaatgaacagcgTATTAAAAAACCTACGATTTCTCTTTCTCacag
agtaggcttttaaagcaaaatatgaaaaaatttgtAGTGGAACAACACAC
ACGGGTCTGGATACTGGAacgaagaaaaacaaattagtggcaaaagaTGG
AGCGTTTAACCTCACTCGCGCGctgcaagttacacacttgttatagacct
tttttcaaagaggccaccctgttgaataattatgtagtccagtagaaaaa
caatgataaaaccatgcataattatttacaatatgcatgatacagtaatt
atgcatgatggccctatcattgtttttatggctggactacataattattc
aacaggacgtcctatttgaaaaaaggtctatttaccatcgggcgataggt
ggttaggcagcgggcgttctctaattctccaatcggcgtccagtcatttt
gaatgaaaacgaaaaagttaaaaaggacagaaagtatgattgataaactt
ggtgtaGTTAGCGGTCTGGGTTCTAAGTGTTTGATCACCAGGTTTTAAGA
GctaaaatacaaattttagTGACCCAAACATCAGAACAGAAGTTTGCCCA
TCATGTTTTGCCATTTTGGCCCAAACATGATTTCCTGTCtgtctgtttgt
tgttgttgtgtgtCCCTTTCTCCAGTGCATCTAACAATCACACAACATTG
CAGTTACTTGAGCTGTTAACATTGGAGATTCATTAGTATagtaaaagtaa
ttaaaaagtattaaaagtGTAAAATAAATCAACGATACAAACCTGACTGA
ATATCACTGTACAGTCATTCGGGTTCAGCCTGAATACACTTACTAAAATT
ACTGAGTACGCTCGCATTTTGTTGAGCCCGACTGTAATTCTAACTGGCAg
gaaaaattcttggaaaattgtttatttttcaagttcGGTCTCGGCAAAAA
AGATTTGAGTACCTGAAGTTGTACATATTTTAAAGTAAACGACAAGCTCT
GTTTAAGATCGTGGAGACAATTTAGTATACTTAGAACGCTTCGCACGATT
TAAAACAGTTGCTCTGGTATCAGGTAAAAGTAATATGGCTGCTcggttta
attttttctttagttttttttggaatttcttcaaataataaaactcaaaa
agtctcaaaaacggaagaagaagaagattatAGATATGACTGATGCAAAA
GACAGGGTTTTTCTCAAGGCCAGAAGGAGAAAAACATCAAGTAATGAAAG
TGGTAGTCCTGAGAAGGTATTATACGATGTCAAGTATGAAGAAAATGGAG
ATATCCCTGAAATTAATGAGTCTGAGGAATTAGAAGAGAAAGATTTGATC
AAAAGAATGAGGCTTGAATTGAAGAGGGCTGGGGAAAACagcaagaaaaa
tgaaaatgagatAGATGAACTTAAACAAACTGTCCATGTTTTATACAAAT
CTCTTGAGGAGTCAAAGCAATGGCAATCGACAGTCTACGCNAACagcaag
aaaaatgaaaaggagATAGATGAACTTAAACAAACTGTCCATGCTTTATA
CAAATCTCTAGAGGAGTCAAAGCAATGGCAATCAACAGTCTACGCACAAA
TGCAACAAATGACTGAATTCAACAATCAAATGTCACAGAGATTAAATGAA
TTGAATGTGGAAATTAAAACACTGAAGCATGATAATGATGAATTTAAGCC
TAAAGATGCTCCCTCTGAAAGTGTTACTAAAATGAAAGAAGCTGTTGTTT
ATGGAGATTCTACTTCCGCCAAGAAGCTTTCAACTCgccgaaaattgaca
aaaactcATCAAATCCCAAAAACTGACATTGTTCAAAAGCCCAATGGTAA
ATCTTCTAATAAAGAATCTAGTAATATTTGTAAACAAAAGCGAACGGATA
TTGAGAAAATTGTTAAGGAGGAGAAAAAAGAAACTGACAACTCTACCGTT
TCTGAAAATGGAAAGGTGGACAAACTAAATACCGAGAGAATAAAAATTGT
AGAGCCACCAAATCTGAAAGAGGAAGATGAGACAACTAAAGAGGGAGGTA
CTTTGAATATTGAAGAAGAGCTCAGAAATGCTGCAGAAGAAGCAATGTCC
AAATCTGGATTTGCTTACGATGAAAGTTCTGGAATGTATTACAACTGGCA
AAGTGGAATGTATTATGATCCAAACAGTCAGCTGTACTATGACCACAAGA
ATGGTGTATACTATTACTACGATCAAGAAAAAGAAACGTATATATTTCAC
TCCCAAATTAAAGTTGCTGAGGAAAAGACAGATGAATCTGACTCGAATGA
TCAGAAAGATGGCCAACTATCAGATGGTGAAATTCGTTCTGAACCTGTGT
CACCTGCAGGTCCTACTCCAGTTATTGACCCGTGCATCAGGGCTATGATC
GTCAAATCCGAATCAGTTGATGTTGGTTCTTTATACATAGTGACTTGTCA
GGGAGGAAGCATTGGGAAAGACCCCTCAAATACTATTTGTTTAGCTGATG
ATGAGCTCGCCAGTCGCTCTCATGCTAAGATCCtatatgaaaatgaaagc
aaaacgttttttatacaagatttgaaaactcaaaatggCACTTATATCAA
TGATGAACGAATAGCGGATGCTAGATGTGAATCTGAACCTATAGAAGTCA
CACATCGTGATTTTATTCGAATTGGCGAAACTACAATTTCTTTTCACGTC
CATACTGGAAACGAGACGTGTTTTGATTGCGAGCCTGGTAATATACAAGC
CATTCTAGAAGCAGAAAAAGAGAAGGCGACCAGGGAAGATTTGAATAAAC
AGAGAAAACATGAAGTCAAAAGTATGATGAAAAAATATGGTTTATCCAAA
GGCTACATACCTAAAAAATTGATCGAATCTGTTCCCGATCGTGCAGCAAG
ACGTCGTAAGGAAGTCGGGAGTGATCCTTATGAGAATATTTTGAGACCAG
TCGAAAAAGCATCTGTACATAAAGAAATATCTGATGAGAATATCGGACAT
AAGATGCTGGCTAAAATGGGATGGAAATCTGGCGAAGGGCTTGGCAAATC
ACAACAAGGTATTGCAGAGCCAATTGGCGTGCAAGTGCATGGAAAAAACA
AAGGGTTGGGGTTCGGTTCTACTGCACCGATTGATAGCAAGCCGTCAAGA
AAACAAGATATATTGAACAAGACTAAGGAAAGATtcgaaaagatttcaaa
ataatacAATTTCTCATCATATTGATtcagatttttctaaaatttttact
ttaggcTTTCAGTTGTGCTCCCTTTTCGGAAGTATCTCCGTGAATTAAAG
ACAGCAAAG Run BLAST on NCBI transcript from alignment at scaffold_350:128670..141379+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060944 ID=TCONS_00060944|Name=TCONS_00060944|organism=Clytia hemisphaerica|type=transcript|length=12710bp|location=Sequence derived from alignment at scaffold_350:128670..141379+ (Clytia hemisphaerica)
AGGTCCTAGGGCATAGGGCTAAAACAGTACTTTAAATAGGTTCAAATTCA
TTGTGGTTTTGAAACATTATCAGGTTCTTTAAGGTACTTGACAAAAGCAT
AAATTTCAAGCTTATTTGATTTCACGAAAAGGGCCTAAGAGAATTGTGAG
AATTGTGAAAGTTTCTGTTAACCCAACTTTGTACACTTAAAGTATACTAG
GTCAGTTTGTTTGAAACACACTGTCGGGACCACTTTCTGTGAAAATCAAT
CATAAAgggagagagaaaaaaaattctagtaCTAGTAGTATTCATCAGAA
AATTTTGTTCACTTAGTCCACTTTTGACTTGATCAGTGATAATACTTATA
ATGTGCAATGCAAATTCTTTCCTTCCTGCCCCTAATATTATGAATTGAAA
TTAGGAAGAAGGCCAGAGATAACTTTCAGAGCAACCCTAATTTTCATAGC
ggcagcctgggtttaggtcttAGGCAAAAATTAGAtccccctgagtttta
agtccccccccccaaaGAATTATGGGGCGGGGaccccaggacttttgacc
ctagacactttcaaaaaattgatccagtaaaaaagggttttccaatgtaa
attgcgttcagttctaagtttaagataaaatattttgcacactttctata
aaaatattgcgccgcagacaaaaatttttaagattcatgagcttcaactt
gagtaattgaagcaagctgaattattttagcccccacgttaagtgatgag
attttagctcgcCCCAATTACATAGGTCCAGcaggggggctgacgctatg
aatTTTGGGACCTAAGTGTTCATATTTTAAAGggattaaaaaaatttagg
taAAAAAACTATATACTCAAACCACCTAataagctctcaaaaaactatat
ataaattcacagttttcaatgggctgaaactttttctggtgAATCTAGGC
TACCTTATGATTTTCTTCCCtgttttttatggtttttgttGAGCTGCTAA
TAAAATTTGctatcatttcaaaaaattttccttgaagGGGGGGGGTCCTT
GGAAAAGCGTACATACACGAAGGAGGAGGTAGTTGCAAAAGCGTACACAA
ACGCACAAGGAAGAAGGGTGGAATTTTGCTTGTATTTGAACATACATACT
TTTTGAAAGGTCCCTAAAATAACATTTCAGAAAATAGTTGTTTAGACTTT
CAACAGTGATATATGAATAGACCATATGAATAGACCATGGATGGTAccta
aataattttaaaaaaactttatgaaTTAGCTCTACAAAGAGTATTGAGCA
CTCTTTTAATGGTTGTTCAACAAactcatagtgtgcagaggggtccagcc
cccagcatttttcagggggggctaaggaaaatagcccccggctaaattct
agaaacatagcccccACCTTCACAAAAGGGGTGGCTTGGACAAAAAGAGG
GGGGTtaattttttaagggggggcttggaagatttggcaatttgcaaaag
agtgttttccattcatttttagatttctcaacaATTATTATATTTCCATT
CATTTGAATGAAGCAAAAACTCTGTTTCTACAACTCTTGATGGAGTATGT
TGCTTTTTCAACCTTTGCAAGACAGCTGCGACCGCAAATGGtcgaaaaaa
agaggggggttgaacttaaacctgggaaaaagaggggggttgaataaaaa
gaggggggttgaggaattttcatttttaagaggggggttgagctaaaaga
ggggggggtgccatttttaagggggggggcttGATACCCCTCTGCCCACT
ATGTTCTATGCAAAAAcattataatttcaaaaatatgtgtCCGACATGAC
ATCACCTCTAGCCAAAGGTCCATGGACCTATGTTCAACAAGTTATCACTT
GATGGATGGGAGAGCGTGAAACTTTagttattgttgttgtttcccTTGCA
TCCATTGAAACGTGGAGTTATCGTGATATATGATGTGATTGTTGTGCTTg
agtttttaattatatccAACAACATGACATCGTACCCTATAGTAGCAAAA
AAATTACcgccaactgctctaacttggcttgggactatctgacaaaacat
gggacggcaatttggctttcatttcaccaaacctccaaagtcatttgatt
tgagttaatgaacagcgTATTAAAAAACCTACGATTTCTCTTTCTCacag
agtaggcttttaaagcaaaatatgaaaaaatttgtAGTGGAACAACACAC
ACGGGTCTGGATACTGGAacgaagaaaaacaaattagtggcaaaagaTGG
AGCGTTTAACCTCACTCGCGCGctgcaagttacacacttgttatagacct
tttttcaaagaggccaccctgttgaataattatgtagtccagtagaaaaa
caatgataaaaccatgcataattatttacaatatgcatgatacagtaatt
atgcatgatggccctatcattgtttttatggctggactacataattattc
aacaggacgtcctatttgaaaaaaggtctatttaccatcgggcgataggt
ggttaggcagcgggcgttctctaattctccaatcggcgtccagtcatttt
gaatgaaaacgaaaaagttaaaaaggacagaaagtatgattgataaactt
ggtgtaGTTAGCGGTCTGGGTTCTAAGTGTTTGATCACCAGGTTTTAAGA
GctaaaatacaaattttagTGACCCAAACATCAGAACAGAAGTTTGCCCA
TCATGTTTTGCCATTTTGGCCCAAACATGATTTCCTGTCtgtctgtttgt
tgttgttgtgtgtCCCTTTCTCCAGTGCATCTAACAATCACACAACATTG
CAGTTACTTGAGCTGTTAACATTGGAGATTCATTAGTATagtaaaagtaa
ttaaaaagtattaaaagtGTAAAATAAATCAACGATACAAACCTGACTGA
ATATCACTGTACAGTCATTCGGGTTCAGCCTGAATACACTTACTAAAATT
ACTGAGTACGCTCGCATTTTGTTGAGCCCGACTGTAATTCTAACTGGCAg
gaaaaattcttggaaaattgtttatttttcaagttcGGTCTCGGCAAAAA
AGATTTGAGTACCTGAAGTTGTACATATTTTAAAGTAAACGACAAGCTCT
GTTTAAGATCGTGGAGACAATTTAGTATACTTAGAACGCTTCGCACGATT
TAAAACAGTTGCTCTGGTATCAGGTAAAAGTAATATGGCTGCTcggttta
attttttctttagttttttttggaatttcttcaaataataaaactcaaaa
agtctcaaaaacggaagaagaagaagattatAGATATGACTGATGCAAAA
GACAGGGTTTTTCTCAAGGCCAGAAGGAGAAAAACATCAAGTAATGAAAG
GTGAGTGATTTTTGGTTGCTTGATCTTTTTTCAGTTTCCGGNatgagcga
gacatacgttctctgattacgcaattttcatattgacattttcaaggcat
tttgatgtaactgtccgGGATGTTGGCagacaaaaaatatataaatatta
agaggggtcactcacatatcaatTCTTCCCACAACCCAGTCTTGAAAGGA
GGGAAATGTTACGGCGGAGCTGCGCCAACTTAACTGGGAAAAGTTAAAGG
CAGCAAATCTCAAACCTCAAATCTACGCCGGAGATATCCTGCGCACAAGC
TGCAATAGATAGCCATtccgggtttgcttgttttttatttgacgcttatc
aaaatcttcaattttaggtcaaactttgacaagcaattgttctttgtgta
gttgagctataaaaataattatttttgtgtaatttagagctttcttttag
ctttccaccaaccatatataatatgcaggtgtaatattctacacttttgt
ctaaaaatttgtttcaactaAGGccgtttttagaaaaattagatctgtgg
gacacaaaaaatttcacaactcatctttgatttcaaagcgctgcgaagga
aaaaatgttcagacagtgaaactttccatatttatcagaaaatacctgag
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNtgtttgttgttgttgtgtgtCCCTTT
CTCCAGTGCATCTAACAATCACACAACATTGCAGTTACTTGAGCTGTTAA
CATTGGAGATTCATTAGTATagtaaaagtaattaaaaagtattaaaagtG
TAAAATAAATCAACGATACAAACCTGACTGAATATCACTGTACAGTCATT
CGGGTTCAGCCTGAATACACTTACTAAAATTACTGAGTACGCTCGCATTT
TGTTGAGCCCGACTGTAATTCTAACTGGCAggaaaaattcttggaaaatt
gtttatttttcaagttcGGTCTCGGCAAAAAAGATTTGAGTACCTGAAGT
TGTACATATTTTAAAGTAAACGACAAGCTCTGTTTAAGATCGTGGAGACA
ATTTAGTATACTTAGAACGCTTCGCACGATTTAAAACAGTTGCTCTGGTA
TCAGGTAAAAGTAATATGGCTGCTcggtttaattttttctttagtttttt
ttggaatttcttcaaataataaaactcaaaaagtctcaaaaacggaagaa
gaagaagattatAGATATGACTGATGCAAAAGACAGGGTTTTTCTCAAGG
CCAGAAGGAGAAAAACATCAAGTAATGAAAGGTGAGTGATTTTTGGTTGC
TTGATCTTTTTTCAGTTTCCGGGGATGTTGGCAGacgaaaaatatataaa
tattaaagaggggtcactcacatatcaatTCTTCCCACAACCCAGTCTGG
AAAGGAGGGAAATGTTACGCCGGAGCTGCGCCAACTTAACTGGGAAAAGT
TAAAGGCAGCAAATCTCAAACCTCAAATCTACGCCGGAGATATATCCTGC
GCACAAgctgcaatagaccttttttcaaagaggccaccctgttgaataat
tatgtactccagcagaaaaacaatgataaaaccacacataattattacaa
tatgcatgatacagtaattatgcatggctctatcattgcttttatggctg
gactacatataattattcaacaggacgtcctctttgaaaaaaggtctatt
tccagACTGGCCCACAACTAAGGTCAAATTGACGCGAAGGGGTGGGGGGG
GTTAGAGTCtgtgacgctaagaaatttcaccatAAATATCGATTTTTATT
TTGAGACGTGAAACtcgcatagccatcaaatgattgatcaatcaaagcag
caaaatttcaaaacaaatgaactacacagCTCCACTCGCATATTCCAGAT
aatactctaccatttttgttttgatttaactttgtattttaatgaccaga
caggttattcatttgagagctatgcatgtttgcctccactgatgcaagtt
acccaatctcacggtattaaACGCTAACGAATGATGTTTTGTATCAATTT
TTAATCAATATCATCGATTGATATCATcgattatagaccttttttcaaag
aggaagtcctgttgaataattatgtagtccagctataaaaacaatgatag
agccatgcataattactgtatcatgcatattgtaatagtTATGCATGGTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNttcaacagggtggcctctttgaaaaaaggtctattaattgAA
GGAATCGATGGAATCGATAATATGAGGTAATCAAATAAGGTAAGCCTATC
TATCGATATATAATCGATGAGTAAGTGATATTAATCGATACTGAAAAGta
atcgatattaatcgatGGCTCATCATCGATACTAATTgatattcacaatt
ttttttaccttgaCGAGCAATTGATTTTAATCAATGATCGATTTTATAGA
TTATGACCGTCtggtctgtaacaggggggaggacgacacaggatttccaa
gGGCAAAagtttcaccaaaattcaaaatttccaaggcaagagaagaaaat
gtatgaatttctaaggcaattgaattaaaaatggctaaaaagagtggaat
ttcagACACATTTTGcgaaagtacatggattttcatcagaatttccgacc
accactggaaaaaaaaatcatttccgaggctagaaaattttttaaaatct
acGTCATCCgacgggggtaacaaaaattttatggaatggcccattttcAA
GTTAccctatttgcagcactgtcCCACTGGACATAGTACGGTGGTGCATT
CCAGAAAGCTTAAATCCCACTGCAGCCCACTGTAATAGTTGAACTTCTAA
TATTTTGCTTGATTTGCAGATGTAGATTTTTAGGATCATATTTTGGTTTT
CATGTttttagatgctgttttagagctttaattAATACTAGCCtgtccgg
gaactgtcgaaatggcgATCATGTGCCACGATAAAGTCTTTATTGTCATC
GAACTTTAATcataatcaaactttttaccagcctggagatccatgatATG
ATTTCTTAATTATATACTGATTgggaaatatatagcatggttaAGATTAT
CTAATTCTGTTAttctttcactggtcacactttctagAGAAAACGtaagt
tccgaaatttggtttttattttagtaagtgaggacagcgctaaattcaaa
tttcccactgaaaattttttgaggcCTCACAGGCCATACCCGTCCTTTAT
ATATCAGATTATAAAGATACAAGACGTATCTCCTGTCTAACTTTCTACTG
ACTGAACTAATTGAactcttttttcttcaaaaattgttcgattagGTTAG
ATTAATTcaattgttcgattggtttgacaagttcgattgattgggTCTGG
ATAAAAGTAGTATAAACCCTCTGCAAATAGTAATGGGCCATTCCCATAAT
TTGTGTGTAACAGGGGTGGAGCAAACGACACGGAATTTCCaaagggcaaa
agttttcaccaaaattcataACCTCCAAggcaagagaagaaaatgtacgA
AAGTTTTTCTATACCCTAAACTACATTAATGTCTTGTTATATTATAGCTG
AATTTGAGAAGAAGACTTATTTTATTTACTCATGATAAGTAAAGATTAAA
CTTTAGCCTTGATCCAGAAAGTAACAACTTAGTAGATGTACTGGGGGTAC
ATCATAAATCTCCTCCCCCATCAGTCTTAGTCCCTCCAACATttgagaaa
tgaaaaaatatctgCCCATcataaatttggcaaaattctGAATGGGTTTG
ATGTGGGGATGAAACCATGATTTCCACTATTCGTtgtaaaaagcattttt
tgtgctcagcgttcatttttggacctaccccggtggaggtcctataaatt
aacctgtgtttgttcgttcgttcgtccgtccgttcttttgtctgttacca
acttttctcaggattgaatcataggaatcttttgatttttggtgcaaaat
ggtggtggccaaaatgtgacggagcctgattttcgagaaaaacaaatttt
gggcaaatttgggccaaaaaacggctaaaaaacgggttttttggactttg
tgaaaaattggatcattaatttttttcgattttttgcatgaaagtagggt
accatcataggtaaaagatggctcaagcagaattttgcaaaaaaaaattt
tgttggcgcaaaaaacgcatgtttatctataagaattactattaataagc
atacatcaatgttcttagtcaaattactcaatttttttatgggatagatt
ttttttgctcatgaaggcttacttttgaagaatatgtgtgtttaagacag
gaaattttagttgcttggcgtgttcttatagaaaaactggccaaattcga
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNttatcaattacttaggtattagcttttctcgagattggctt
tttcattctttatgatattttgcacaaagatgcataactataaaccttcG
AATGTGACAGAGTcagactttcaaataaaaatgttattgggcaaatttgg
gccaaaaaaaacggctaaaaaacgggtttttggacttcgtgaaatattgg
atcattgtttttttctgatttttggcatgaaagtaggtaaaagatggctc
aagcagatttttgtaaagaaagaatttttcggctcaaaaaacgcatcttt
atctataagaatcactattaataagcatgaaagaatatttcaagagcatg
aaattttggtttctaaacttttttttttataagaaacaaacaactaagta
atttaaatagattgtcactatttgtgttctgaatgattgtttaatggtca
cgtcatgtagatatcaattataaatgtgttaaatgcataaccaggtaggt
ccataaaagtatcacttgttcttttcaaattttagtcttCAATTTTAATT
AGAAGAACAAGTATTCACTAATAATGGTTACGATTTTTCCACAGGACATG
TAAAACTATTAATAGGagtctaaattttttttctccagaagttcaaaaag
tttgttagtTCTgaagatatattgaaaagtttagagaTCCGTAGATCACG
TCACAGTGTATTATTTTAATAAGAAtgctatttaaaaaagaagGGATAAA
ATTACAGAGGGGAGGTTGATATAAGGGAAATGAAATAAGCATGGGGTGTC
ACACCCCTctgtatgaaaaaaaaaaaacactacatgACTTCTGACTTCAC
CCAGACAATGGCTGTTAACGCCTTAGCATACTTTCAGTATCCTCTATAAA
GACGCCACAATACCCAATATATTAGATGTTTACCGAATAAGTTGTAGCTT
ACAGGATTGAGCATTTGTGTTGTTGGGGTTACTCACAAGCAGCCTCATAT
TAttctatttgatttgatttgtttgaatggtacattttccttgtttttat
agTGGTAGTCCTGAGAAGGTATTATACGATGTCAAGTATGAAGAAAATGG
AGATATCCCTGAAATTAATGGTATTTACAAATTACATCAACCGCGTACAG
TACTTTGTATCTTTTGAGCTTGCACAGCTTCTAAATGGCTAGAAGCTAAC
CCACGCGTTCATACAATGAGAGACTAAAACTTTTTAAGGGAGTCTGCACT
CTCCACTGTTCTACTGCAATGAAGTGTTATTCTTTTGTGAaatgtctttt
ttattttccatcaGAGTCTACTATCGTCTTAAAGATTTTAACTTCCAACT
TCTTTTAGATTATACACCATATACAAGTTTcattaaagtttgaaattaat
caatatttttttcaaaatttatcttCCAGAGTCTGAGGAATTAGAAGAGA
AAGATTTGATCAAAAGAATGAGGCTTGAATTGAAGAGGGCTGGGGAAAAC
agcaagaaaaatgaaaatgagatAGATGAACTTAAACAAACTGTCCATGT
TTTATACAAATCTCTTGAGGAGTCAAAGCAATGGCAATCGACAGTCTACG
CNAACagcaagaaaaatgaaaaggagATAGATGAACTTAAACAAACTGTC
CATGCTTTATACAAATCTCTAGAGGAGTCAAAGCAATGGCAATCAACAGT
CTACGCACAAATGCAACAAATGACTGAATTCAACAATCAAATGTCACAGA
GATTAAATGAATTGAATGTGGAAATTAAAACACTGAAGCATGATAATGAT
GAATTTAAGCCTAAAGATGCTCCCTCTGAAAGTGTTACTAAAATGAAAGA
AGCTGTTGTTTATGGAGATTCTACTTCCGCCAAGAAGCTTTCAACTCgcc
gaaaattgacaaaaactcATCAAATCCCAAAAACTGACATTGTTCAAAAG
CCCAATGGTAAATCTTCTAATAAAGAATCTAGTAATATTTGTAAACAAAA
GCGAACGGATATTGAGAAAATTGTTAAGGAGGAGAAAAAAGAAACTGACA
ACTCTACCGTTTCTGAAAATGGAAAGGTGGAGAAACTAAATACCGAGAGA
GAAAAAGTTGTAGAGCCACCAAATCTGAAAGAGGAAGATGATACAACAGA
AGAANAACTCTACCATTTCTGAAAATGGGAAGGTGGACAAACTAAATACC
GAGAGAATAAAAATTGTAGAGCCACCAAATCTGAAAGAGGAAGATGAGAC
AACTAAAGAGGGAGGTACTTTGAATATTGAAGAAGAGCTCAGAAATGCTG
CAGAAGAAGCAATGTCCAAATCTGGATTTGCTTACGATGAAAGTTCTGGA
ATGTATTACAACTGGCAAAGTGGAATGTATTATGATCCAAACAGTCAGCT
GTACTATGACCACAAGAATGGTGTATACTATTACTACGATCAAGAAAAAG
AAACGTATATATTTCACTCCCAAATTAAAGTTGCTGAGGAAAAGACAGAT
GAATCTGACTCGAATGATCAGAAAGATGGCCAACTATCAGATGGTGAAAT
TCGTTCTGAACCTGTGTCACCTGCAGGTCCTACTCCAGTTATTGACCCGT
GCATCAGGGCTATGATCGTCAAATCCGAATCAGTTGATGTTGGTTCTTTA
TACATAGTGACTTGTCAGGGAGGAAGCATTGGGAAAGACCCCTCAAATAC
TATTTGTTTAGCTGATGATGAGCTCGCCAGTCGCTCTCATGCTAAGATCC
tatatgaaaatgaaagcaaaacgttttttatacaagatttgaaaactcaa
aatggCACTTATATCAATGATGAACGAATAGCGGATGCTAGATGTGAATC
TGAACCTATAGAAGTCACACATCGTGATTTTATTCGAATTGGCGAAACTA
CAATTTCTTTTCACGTCCATACTGGAAACGAGACGTGTTTTGATTGCGAG
CCTGGTAATATACAAGCCATTCTAGAAGCAGAAAAAGAGAAGGCGACTNT
TCATACTGGAAACGAGACATGTTTTGATTGCGAGCCCGGTAATATACAAG
CCATCCTAGAAGCTGAAAAAGAGAAGGCGACCAGGGAAGATTTGAATAAA
CAGAGAAAACATGAAGTCAAAAGTATGATGAAAAAATATGGTTTATCCAA
AGGCTACATACCTAAAAAATTGATCGAATCTGTTCCCGATCGTGCAGCAA
GACGTCGTAAGGAAGTCGGGAGTGATCCTTATGAGAATATTTTGAGACCA
GTCGAAAAAGCATCTGTACATAAAGAAATATCTGATGAGAATATCGGACA
TAAGATGCTGGCTAAAATGGGATGGAAATCTGGCGAAGGGCTTGGCAAAT
CACAACAAGGTATTGCAGAGCCAATTGGCGTGCAAGTGCATGGAAAAAAC
AAAGGGTTGGGGTTCGGTTCTACTGCACCGATTGATAGCAAGCCGTCAAG
AAAACAAGATATATTGAACAAGACTAAGGAAAGATtcgaaaagatttcaa
aataatacAATTTCTCATCATATTGATtcagatttttctaaaatttttac
tttaggcTTTCAGTTGTGCTCCCTTTTCGGAAGTATCTCCGTGAATTAAA
GACAGCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060944-exon-scaffold_350-1491911889:128670..132069 | TCONS_00060944-exon-scaffold_350-1491911889:128670..132069 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1510915933:128670..132069 | TCONS_00060944-exon-scaffold_350-1510915933:128670..132069 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1575043694:128670..132069 | TCONS_00060944-exon-scaffold_350-1575043694:128670..132069 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1491911889:138822..138889 | TCONS_00060944-exon-scaffold_350-1491911889:138822..138889 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1510915933:138822..138889 | TCONS_00060944-exon-scaffold_350-1510915933:138822..138889 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1575043694:138822..138889 | TCONS_00060944-exon-scaffold_350-1575043694:138822..138889 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1491911889:139199..139845 | TCONS_00060944-exon-scaffold_350-1491911889:139199..139845 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1510915933:139199..139845 | TCONS_00060944-exon-scaffold_350-1510915933:139199..139845 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1575043694:139199..139845 | TCONS_00060944-exon-scaffold_350-1575043694:139199..139845 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1491911889:139952..140761 | TCONS_00060944-exon-scaffold_350-1491911889:139952..140761 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1510915933:139952..140761 | TCONS_00060944-exon-scaffold_350-1510915933:139952..140761 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1575043694:139952..140761 | TCONS_00060944-exon-scaffold_350-1575043694:139952..140761 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1491911889:140846..141379 | TCONS_00060944-exon-scaffold_350-1491911889:140846..141379 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1510915933:140846..141379 | TCONS_00060944-exon-scaffold_350-1510915933:140846..141379 | Clytia hemisphaerica | exon |
| TCONS_00060944-exon-scaffold_350-1575043694:140846..141379 | TCONS_00060944-exon-scaffold_350-1575043694:140846..141379 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_350 | supercontig | scaffold_350:128670..141379 + |
Blast
BLAST of TCONS_00060944 vs. Swiss-Prot (Human)
Match: AGGF1 (Angiogenic factor with G patch and FHA domains 1 OS=Homo sapiens GN=AGGF1 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.219e-36 Identity = 110/327 (33.64%), Postives = 180/327 (55.05%), Query Frame = 3
Query: 4422 EKTDESDSNDQKDGQLSDGEIRSEPVSPAGPTPVIDPCIRAMIVKSESVDVGSLYIVTC-QGGSIGKDPSNTICLADDELA-SRSHAKILYENESKTFFIQDLKTQNGTYINDERIADARCESEPIEVTHRDFIRIGETTISFHVHTGNETCFDCEPGNIQAILEAEKE-------KATREDLNKQRKHEVKSMMKKYGLSKG-YIPKKLIES--VPDRAARRRKEVGSDPYENILRPVEKASVHKEISDENIGHKMLAKMGWKSGEGLGKSQQGIAEPIGVQVHGKNKGLGFGSTAPIDSKPSRKQDI----------LNKTKERF 5336
E TD + + S+G + +E + PCIR ++++S + +GSL+I+T +IG++ L E+ S+ HA+I ++++ +++ + D +QNGT +N ++I + + +P + H D ++IGET +SFH+H G++TC CEPG ++A L +K+ ++E+ +R+ E+K + KYGL Y +K +++ DRA +RR++VGS+ R ASVH EI+D N G KML KMGWK GEGLGK G+ PI +Q+ + GLG G KPS +D+ +K +ERF
Sbjct: 372 EITDSQTEDSYDEAITSEGNVTAEDSEDEDEDKIWPPCIRVIVIRSPVLQIGSLFIITAVNPATIGREKDMEHTLRIPEVGVSKFHAEIYFDHDLQSYVLVDQGSQNGTIVNGKQILQPKTKCDPYVLEHGDEVKIGETVLSFHIHPGSDTCDGCEPGQVRAHLRLDKKDESFVGPTLSKEEKELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQVGSEG--TFQRDDAPASVHSEITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGLGTG-------KPSSFEDVHLLQNKNKKNWDKARERF 689 HSP 2 Score: 83.1889 bits (204), Expect = 8.955e-16 Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 3
Query: 4206 NIEEELRNAAEEAMSKSGFAYDESSGMYYNWQSGMYYDPNSQLYYDHKNGVYYYYDQEKETYIFHSQIKV 4415
++ E LR AAE A+S++GF+YDE++G+Y++ +G YYD +QLYYD G+YYY D E Y FHS++ +
Sbjct: 189 SLAESLRAAAEAAVSQTGFSYDENTGLYFDHSTGFYYDSENQLYYDPSTGIYYYCDVESGRYQFHSRVDL 258
The following BLAST results are available for this feature:
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