TCONS_00060961 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060961
Unique NameTCONS_00060961
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1417

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060961 ID=TCONS_00060961|Name=TCONS_00060961|organism=Clytia hemisphaerica|type=transcript|length=1417bp
GTAGAGCATTGTTTTATTGTGATGTGGTCTGTTGCATGTGTTTGTTATTC
CTTGCCCCCCATTTTCCCTTTGTTTAAATCTCTTATATTTTCTTTTCcac
cagaaccaccaaaaaatatttccatttgGAATATCACTGGACAGAAGAAA
GAAGGTTTTCATTCttgtcaattttcaaaattcgaatTATGGAGGACAAC
CGAAGCTGTAAGAAGCCACAAAGACCCGtcacaaaatccaaaaagtgtgT
CGTTTTATAGGAAAAGTCATTCAATCAGCCCTCGAAGAAGAATTCTGAGC
AGcAACAATGTTAACAAACAAGAGAAAAATATCAGCGGGTCCCGACCTTC
AACCCATCTTCGAAAACGAAGACGTCgttgagaaatttgaatataatgtt
ATCGTTGAACCCTTTCCATCCATGGGCGTTATCAAACATACACCTGTCAA
GATAGAAAATCGACCGCCACAAGCACCCcgtaaaaacaaaatggcggctg
GGGACCAAATCGATTACGTCAACAATGCATTGTCATGGTTACAAACGGAG
CTTGAACTTTTGAAACGTGAAGATAAAGAGCCgttatgtttttataagaa
ccttaTGACCACGGTCAATAATTTAAAACGTGTGACCACTACTTTCAAAG
AACAATCGGACACGTTATGTAAAATACCAAATAGTATTGAAAATGCCGAA
CACGATAAAATTCGAAAACTAAATTCATCCACGAACACTCTTGAAAAGGG
AATATATGAGCAAGggaaagaaaaaagttccgtTGGTACTTGATGATTCT
CCTCAACGCAATGTCAGGATTCGTGATGCTCGGTACACGAAAACATACGT
TACCATGGATACAAAGTATGTTGCGAAGAGAAGATGCCGCGTTGGTCAAA
GTACCATACTTTCTACAGCCGTTTAATTGTGAAAGAATATAAAGTTGATT
TGAGAAACGAGAAACATTCAATGTTACGGTGACCAATGAGAAAATAAAGA
AGGATTTATTCTGATCCTTCCAACTAGCCTTTAATGACTGGCTCAGACAC
CAGATAAACCTTGGAAGAAGCTCTTGGGtagaaaaattttgttattgtaA
AACAGCCGAAAATATTGCGAAATGTTTTCTTGATTATTTTCTCAACTTTT
CACtgtagtggggtcgtttagcataatttacgggaaaaaaataatatata
gctgaaactttctccagaccttctctataggatgcttatgtctcaggaaa
aaatcccctaaaatcccactggtggaacatctcTTTTTTGGgctatttct
ttttttccccaggcaaaaccctaagggcgaatttttttgaaaatttcaaa
ctcattttcagacaatatcatgcataccattcgaaagctctcaaaaaact
atatagaagacttttaa
Run BLAST on NCBI

protein sequence of TCONS_00060961-protein

>TCONS_00060961-protein ID=TCONS_00060961-protein|Name=TCONS_00060961-protein|organism=Clytia hemisphaerica|type=polypeptide|length=161bp
MLTNKRKISAGPDLQPIFENEDVVEKFEYNVIVEPFPSMGVIKHTPVKIE
NRPPQAPRKNKMAAGDQIDYVNNALSWLQTELELLKREDKEPLCFYKNLM
TTVNNLKRVTTTFKEQSDTLCKIPNSIENAEHDKIRKLNSSTNTLEKGIY
EQGKEKSSVGT
Run BLAST on NCBI

transcript from alignment at scaffold_350:59870..70404-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060961 ID=TCONS_00060961|Name=TCONS_00060961|organism=Clytia hemisphaerica|type=transcript|length=10535bp|location=Sequence derived from alignment at scaffold_350:59870..70404- (Clytia hemisphaerica)
GTAGAGCATTGTTTTATTGTGATGTGGTCTGTTGCATGTGTTTGTTATTC
CTTGCCCCCCATTTTCCCTTTGTTTAAATCTCTTATATTTTCTTTTCCAC
CAGAACCACCAAAAAATATTTCCATTTGGAATATCACTGGACAGAAGAAA
GAAGGTAAGAATTATTTCTTTACTGGAGATCCTTTGATGGTTGAACTCAT
TTTTCAACCTCTAATCCTAACAACAAGCATGCTTTCTCGTAACATAAGTT
CCTTAAAAGAAGGGGTGGAACTAAGGTGGATTTTAGACTTTGAGGAGGTC
ATTTTTCGGATACTGGACGAAGAATTTTCACTGACACCACACCACGTCTC
TTTTCGACCAAAAACCCTCTGAATTTCTTCCTCAAGAGTAGTTCCCTAAA
TTTTACACCCACAAAATCATTGTGCTCTTGGATGTCACCTCTATCCACAA
TATGGAGATACCCGAACTATTTCCCATCTGTTATAATACCCTTGCTTTCT
GAACTATTATAGTAGATCTACTAACCAGCCCATTCGGAATAACGGGGTAT
TATTTTGGTTCTGGTATATTAACTCTAAAATTTAGGCTTATTATTGTTAA
TTGAGGTTCATTTTCGTTTTCTTAGGTTTTCATTCTTGTCAATTTTCAAA
ATTCGAATTATGGAGGACAACCGAAGCTGTAAGAAGCCACAAAGACCCGT
CACAAAATCCAAAAAGTGTGTCGTTTTATAGGAAAAGTCATTCAATCAGC
CCTCGAAGAAGAATTCTGAGCAGGTATGGACCATTCCATTTATTTAAGTT
TCTTTATTCACACTACAGTATTTGGTATCCTTTGTGATTGGCAAGCTTTA
TAGAGTTTAATCACTAGCTGAGTAAGTCTTTAAAACAACTTCCATGATAA
CGCCTGTACAGTTGTCTCTCTCTAATTCGATCTTCAAGGGACTAACTTCT
TCGAATTAGAGTAGGATTCAAACTATAGAGAGCATGTTAAACTCATTTCC
AGCTGCGGAGACCAAGGTTTAGTTTGAATTACTGAATAGAAACTCGATTT
GTCCGAAAAACAGCCGAAAGAACCTGGAAATACGCCATGAATGTTTGCCA
GGAATGGCAACTACGGTACTGGTGTTTGAGTTAGCCTGCGAGAATAAGGT
CAATTTTTGTGGATTTAAAGGATTTAAAGTATTTTCATTGCGGGGGTATC
CTTTATAAAAGAATTCTACAAGTCTTTCATAAAAACGTCAAAATTTTTGC
TGTTTAGTGTGGACCTTTCTAATATGCATATTTTTTTCTCATATTTTCAA
AATAGTTGAAAGTTGGTAGTGGGTCGTCACCTTTGATTATCTTTAAAATA
AATTAAATTTTTCTATCGTTAAGTAATCACTGAAAGGCATTGGATTGCCT
AGGTTTATTTTCATATTACGGGTTTTGAGAACATTTTTCCTATTCTATAG
AAATTTAAAAAAGATGTATGAACCTATTTTAAATAGTAGTGCCCACGTGG
TATCCTTGTACGCCCCTGTAGCATTTCCCAGACAGATTTCATTTTACAGA
ACTACTCATCATGAGACCAGCAAATCTCATTTCAAATCCCATATCAAATG
ATGATGGGTTCTGGGTGATGTCATAATCCACTTATAAAGTGACTAATGAT
GGAAAGAACCTTTTAATATTTTCCAACTTTGTTGTCTGATGATACAAACT
TGATAACTTTAAAGTGGGAACGGCTTTTCGATAATTTTGTTTGCTGAGAG
TTGTCTGGAGTCTAAAGAGCTCTTTATGCAAAGCCTCTGTTAAGTTTTGT
TTGGCTTTGTTGGTAGAGTGTGATGTAATATTCTCTCGAGCTTCGAACTG
ATTAGCTTCAGAGTTCCATAACAGACGTCAAAAAAGACGAAGCCGTTTAT
CTTTCATCAGCTAAGAGGCTTTCTCTCCGCCTCAATATACTTTTTACTTT
AAATCGTATAAGTTATTTATTATCAGTATACCATCTTCTTTGAGAAAATT
CATTTCTTTTGGCATGTTATTATAAAGTCAACCCGGGTTTCTAGTCTGAT
CGTCAAATCCTGTTTTATCCTATCAAGAAATAGATAAACTTTCAAATAAT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTGGAGTCTGAAG
AGCTCTTTATGCAAAGCCTCTGTTAAGTTTTGTTTGGCTTTGTTGGTAGA
GTGTGATGTAATATTCTCTCGAGCTTCGAACTGATTAGCTTCAGAGTTCC
ATAACAGACGTCAAAAAAGACGAAGCCGTTTATCTTTCATCAGCTAAGAG
GCTTTCTCTCCGCCTCAATATACTTTTTACTTTAAATCGTATAAGTTATT
TATTATCAGTATACCATCTTCTTTGAGAAAATTCATTTCTTTTGGCATGT
TATTATAAAGTCAACCCGGGTTTCTAGTCTGATCGTCAAATCCTGTTTTA
TCCTATCAAGAAATAGATAAACTTTCAAATAATCCCACCCTCCTTCGTTG
AGTTTGAACTATCTCCCTTTTTAATTTTATGGGTGCTGCTGTGTTAACCC
CTCTAGAAAAGAATTTAGCATTAGCTCAACCCTTAAAGTTTTCTCTTGTC
AATAAAACCTATTGTCTGAAAAATGTATGTAATAGCCTTAAACGAGATTA
CGAAATTTAACTTTGCTTGGGGTACACATTCCAACCCAGGGTAGAATTGT
TCTTTTAAATTGCGCATGAGTTCTTAAATATTTATTTGGAATTCTGCAAA
AGTTTGGTCTGGTCTTGTAGTTTGAAAAATTCAGACAGTAATTTGTTATT
TTGCGGACTTAAGGTTTAGGTTGCGAGTCCTTTATATTTGTTTCCCTGAA
ACTCATCTAGAAATATAATGCTCAGGAATGTACAGGATTCCTTCGTATGA
AATGCTGTTTAATGCTGGTGCGATTATTGTAAGTTTGGAGTGTTTGTACC
AAAGAAATCGTCATCAGAAAGACAACAAAGTAGCTCAGCAGCGTGCAAAG
AAAAATGCATTAGCGTGTGTTATCAAAACAACACATCATGATTTGGCTCC
TGTGAGCTTTCATCGCGCGAAACTCGAGAAGGTGCGAAATCGTTTTGTTA
TGTCCAAGTGTGGTTGAGAGAGGAGTTAATTAGCGAAGGTTGTGGTTTCC
CTATGGATGTTGAAAAGATGTCTAATGGACATGTGCGATTGATTCCCCTT
CGATTTCTCTCTTGAAAAACGTGTTGGAGCGAAAACCAGAAAAACTGGAA
ATGACAAATGATGAAAAATCGCTAACATTTTTTTTTTGTTTCAACAAATT
TTTTTTGTTGTTACCGCAAAATGTTAGATAAAGTCACCCTCCAATCGAAA
CAAATTTCTCTACGTGTGCGCTCCACCGTGTTGAATTTTCTTCACTGTGG
CTCTCCTTCGTTGTACATTTTCCTGAGGATACGTCAATGTTGTAATACGA
TGGCTTGCTTAATTGCTCTCTTCACAATTTTCACATTTTTTCATGGCTAC
AAACATTCAAAAGACAAAATAATTTCTTGTTTTTCAAAACATTTTCTTTT
GGCGTCGTTGTCTTTAAGAGATGCCATATTGGAGTTTTGACATATCGGTT
TCTGGGCATGAATGATGGACTTTTGTAATGTATTGTACAGGGTAATACTT
CATAGCCAATGTGTTGGTATTAGACTTACGGTAATGAATACACACTTAAG
TGATTTACGAAGGAGCAGCATGAGGAACGGTTGAGTTGAGATCATTGAGT
TAAAACCTTGAAGACGCTAGTGAAAAATCTTCAACCTTTCTCAAGCAAGA
AAAACGAAGCTTAAGATTTGCACAGCATTTCGACGGATTCAATTCTGAAC
GTTTATCCATTTTGAGATTGACTTTAAAATCTGATTGTTCATGAGTCGCA
GTTTCTGTGCAAAAGTTCCGTAGTTAGGTTTTGTTTAGAGGGTGGCCAAT
TTCGGGTAAAACTTAAATTAAATTCTTATTCGATTCAAGAGGTTTAGCAG
CCCGGGGTCCATTTAAAGCTCTTTGATAGACTGGATGGCGCGATTAAGTG
GCCCGGTAGTATATGGTAATATGCTTTTGCTTAGGCGGACTGTAAAACAG
TCCGCCAGATTTTAGTTCTTTTTGGAAGGTAAAAACAGTACGAAGCAATG
TTTTTATTTGAGAATAAGTGATTGCAAATCTGTTATTGATGTTTATTTCT
CATTTTTGATTACATCTTTCAACTCCAAGTAGTTTTTTTGTTATTTGGAT
TTTAAACATTCTTTTTCAAAATGTCGACCTCGCCAAACGCTCCTAGTCTA
CTTCACTGGACTCAGCGTCATCAAAAATTGTCAAAAAGCAAAGTTCAGCC
AAAAGTAGACTCTAGTCTAGAGGTTTAGCAGCTTTTCTGCCTTATCACCC
TTTAAATCAACCAAAAACTTTAATCCATAAATACCTCAATCATCTTACCC
AATTATCCAACTAATCTCAATAATTTATAATGACCACTTAATGATGATTT
CCACAAGTTGATCTATGGACTTTGAACATTGATACTTAATTGGGTCTTTA
ATTTCATCCGCTTCTGGTGTTGTGTAATTAGACCCTTATTTCTCACAACT
ATTGCCAATTTTTTGCGCAAACTTTGAAATAATAAACATTTCTAAACACG
ATGTTAATTAAATGACCAGCTCACCGCTTAATGACTAACTGAACTTGTCA
ACTTTCTTCTATTTTGAAATGAATGAAACCAGGATAAGCTTGTTCATCGG
TTATGAATGAATTTTTTGGGGACTTAAGTTTGTATTTATCCTTCAAACAA
TTTCATATTATAGGATCTGGCAGATTAGTTGTTATCGCATACTTTGTGCT
AATTTAGGGAAATTCACGTTTTTAAAATCGCGAGTTTTAGTTAGCGTTTA
GCTGCTCTTAAATATTGCTTAACAATATAACAATAGCGTTCAGTTTGAGG
TCGTTGTTGTTATTTTCTGCCCGCGCAGTTTGATTATTAGCCCGAGAGTG
TCATTTGGGCCCGACGCGAAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGTTTTTTTTTCTGACGTTAGTTTAGTCTTTTCGCTTCA
ATGCAACGACTTCAATAAAGTTCCGAGCGGGCCGCAAATGACGTTATCGC
CCTATAAACAGGGCTGTTAATGATATTTCAGCCCTCTGAAGCGCGACGCC
TTAGTTTTTTCAGCGCAGGTATGACTATTTGAGTCATAGAACCTTTCAAT
ACCGCCTGCCGTTCGAATCTTTAATGGCTTACTTTAATGACCGCTATATG
GATAATAATTATTCGGTTAGCGGATATTTTATATTTGTTGCACGAAGAAA
GGCAAGAAGGAGGAGGTGTATGCACATTGTATCATTTTGTTAATAAAATG
CTTCAAATTCTTTCTACACAGAAGTCTGGTACTGACTCCGCCCCTTCAAA
AGGGGGTATTACAAATCACAAATATTTCGTTCAAAGGAAACTGGAATTTC
GTCAGTGGTTTCCAGGCGACATTCCAACCGTCCTTTTAATAGAAAATCAT
TCATAACTTCTTTCATAATACTCATATAACGGTGTCACGAAAATTTACTA
GTACAACTGTTTTTTTTGTTTTTTTTACTTTTATTGAATGAAATATTTCT
TATTTTGATTCAATGTTACCAAATAAATCTGGACAAATCGGTTTTCGAAA
AGTTTCTCGTGATTATATACAGCTCTTTTCTCTTCTTTGGACGGGTTTCT
TCCCTTGTTGCATATCTCTACGTTTGACATTGATCGAATTATTACTGTCA
ACTATATTTGTAACAAAGAAGACATATCATGCTTGTGAGTGGCACAAAAT
AATTTGTCTCAGTTTTCAACTAGTAGTTTGTTATGAACTTAAGTGAAAGC
ATTTCAGATATTTTTAAGTTGTTATTGTTATGTTCAATGTTAATGTGATA
ATGCGATTCTTTTGAGCTTCAAATATTCATTTTCATGGGTTCTTCGTGTA
TGTCCTGTAATTTCTGAAAGTAATCTTCATTCTTCATTTTATTGATCCCC
GAACGGGGGGGGGGTAACTAACCACCATTTTTACCCTCAAAATGCTAAAT
TTCTTTCCTCTATTTTTTACCCAAAATTTTCAGCTTTTCACATACCGTAT
TCTGTAATACACGAAAAACTTTTCATCCCTTTTTCTAATGAATTTTTGCC
ATTTTTAATTCGTCATATTACGTAATTATATGATGGATGACCTCGTTGGC
TCTTGGATCGATTGAAAAATTTCGATATCAGATTTTGTTGTTTGTGGTTT
GGAAATTCTTTAAATTACACTGGAGTGACTTCTCTCTTACTGGCTCCTCG
TTATAAAACTATAGATGAAGTTGAAAACACTTTTAAGCATTTCATTTGCG
TGATTGTTATTGTAAGGGGAGGTACTCTAATGTTACACAAGTTCTCTCAG
CTTTGGAAGAGAGCAAAGAGTAGAGCCTTTTTTTTAGCTTTTCTAATTGT
TTTACTTTCTGCTATCGTATTAACGTTGCTTCTCTACCTGCATTGCAAAG
TTTGCAATGAATTCCATTGATTTTGATTATCAATTTATGATATCAACTTA
GGAGTAGCTACTTGTGACTACCAGGGGTACTTGGGTAAAAAAGGTTGCGT
GCATATGCGCCGACCGAAATCGGAGAACAGCGAGACTGAAGATTTCTTGA
ATTTAGCGACTCTGTTTTTGTTTTTTTGTGGTTTTCATACCGTTAGAGAG
AGTTTGGAGGTGACTATTTTGACTTTTTGTTTTCGTAACTCTTATGATGG
ACTTTCGAGTGTGCTAAAGTCTGACCCAGGATCTTGACTAAGAATATCGA
TGAGGCGATTTTGTTTTTTCACATCCATAGCAAAAAGTCCGTAAACAAAT
TTCAGGTTGTTCTTTTGGAAGATGACCTTTTGAATAAGATCGACGGTGAA
TAATATCTCTAAAAATATCTTCCAATTTTGATTCCAAATTTCAATTTCGG
TTAAAAAAGAAAAAGTACTCGCTTTCTCAGTTTTTTAGCCTCGAATTAAA
CAAGCTTTTGGGAGCTATCTTTATTGTAAAAACCGAAAAAATAATGAACT
GACTTTTAGACTTTATTTTCATGTATTATTCATGATTTGTCTGACAATAG
TGTTTTTCCTATTTCCAGAGAATTTTTAGCTAAGAATCGCTTTTAACTAG
TAGTATCTGGCCTCCAGACCTTTTTTGGGAGCTTATAAAGTAGATTGGAA
TTTCGGACATAATCCTCATTGTTGGTTCGAGACAATAGGTCAGAACTGGA
ATCACTTGGTCAAGAATTTCTTGAATTCTTTCACTTTCAGTCTGGTGATT
CATACTTTGGTTATTCTCTTCCTTCCTCTGAATTTAGAAAGTATTTCCTG
CGATAGAATGAAGGAAGCAGTTGCTTTAAAATAATCCGTACAATTCTGAC
GTGCGTTTGATCTCTAAGCAAACGAGTTCGGGATTGGACTTTATTCCTCT
GTTTACATATTTCACTTTCAAATTATTTTTGACTTAATGTTTGTTTGTTT
GTTTGTTTGTTTGTTTGTTTGTTTGTTTGCTGCCCGGGGGGGGGGGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCCCCCCCCCCC
CCGGGGTTTGCTGGCAAAGTGGTTTTCAGTGAGGAGTGAAAATCTATCAG
CAGATTCTTGAAATGTTTTTTTTTAGTCGTTAACAAAGAGGTTCCCGTTC
CAAACACGCCAATGTCATCCTCCTATTGTGCAATCTTTTGGTGTGTAGGA
GAGAAAAGAGAAAATTGAGAAATGAGTTGAAACGAGGAAGCCTTGGAGCG
GAGGCCAACAGGAGGTTGTTAAAATAAACCACAGATGAAGGATTCTTGCA
TGACAGTTTTGTTTAATGAATGTCTGAAACTTCCCTTTAATTCTTTCCGT
TCACATACAGACAGATCCTTTATAAGGAGAATTTTCTGGATACTGTCAAG
TGTTGCTATAAAAGAAATCGTTGAATGGAGCAGTATCGAGAGAGTTTTTG
ATTCGTGGTTTTGCCTCCTGTTTCGCTAAATCTAAATCTTTTTACTGAAT
TTGCTACACTGACAATGTTTCGTTGCACTTAGCATTTATTTATTATTTTT
CCATTTTTTTCTCATTTCAGCAACAATGTTAACAAACAAGAGAAAAATAT
CAGCGGGTCCCGACCTTCAACCCATCTTCGAAAACGAAGACGTCGTTGAG
AAATTTGAATATAATGTTATCGTTGAACCCTTTCCATCCATGGGCGTTAT
CAAACATACACCTGTCAAGATAGAAAATCGACCGCCACAAGCACCCCGTA
AAAACAAAATGGCGGCTGGGGACCAAATCGATTACGTCAACAATGCATTG
TCATGGTTACAAACGGAGCTTGAACTTTTGAAACGTGAAGATAAAGAGCC
GTTATGTTTTTATAAGAACCTTATGACCACGGTCAATAATTTAAAACGTG
TGACCACTACTTTCAAAGAACAATCGGACACGTTATGTAAAATACCAAAT
AGTATTGAAAATGCCGAACACGATAAAATTCGAAAACTAAATTCATCCAC
GAACACTCTTGAAAAGGGAATATATGAGCAAGGGAAAGAAAAAAGTTCCG
TTGGTACTTGATGATTCTCCTCAACGCAATGTCAGGATTCGTGATGCTCG
GTACACGAAAACATACGTTACCATGGATACAAAGTATGTTGCGAAGAGAA
GATGCCGCGTTGGTCAAAGTACCATACTTTCTACAGCCGTTTAATTGTGA
AAGAATATAAAGTTGATTTGAGAAACGAGAAACATTCAATGTTACGGTGA
CCAATGAGAAAATAAAGAAGGATTTATTCTGATCCTTCCAACTAGCCTTT
AATGACTGGCTCAGACACCAGATAAACCTTGGAAGAAGCTCTTGGGTAGA
AAAATTTTGTTATTGTAAAACAGCCGAAAATATTGCGAAATGTTTTCTTG
ATTATTTTCTCAACTTTTCACTGTAGTGGGGTCGTTTAGCATAATTTACG
GGAAAAAAATAATATATAGCTGAAACTTTCTCCAGACCTTCTCTATAGGA
TGCTTATGTCTCAGGAAAAAATCCCCTAAAATCCCACTGGTGGAACATCT
CTTTTTTGGGCTATTTCTTTTTTTCCCCAGGCAAAACCCTAAGGGCGAAT
TTTTTTGAAAATTTCAAACTCATTTTCAGACAATATCATGCATACCATTC
GAAAGCTCTCAAAAAACTATATAGAAGACTTTTAA

Coding sequence (CDS) from alignment at scaffold_350:59870..70404-

>TCONS_00060961 ID=TCONS_00060961|Name=TCONS_00060961|organism=Clytia hemisphaerica|type=CDS|length=486bp|location=Sequence derived from alignment at scaffold_350:59870..70404- (Clytia hemisphaerica)
ATGTTAACAAACAAGAGAAAAATATCAGCGGGTCCCGACCTTCAACCCAT
CTTCGAAAACGAAGACGTCGTTGAGAAATTTGAATATAATGTTATCGTTG
AACCCTTTCCATCCATGGGCGTTATCAAACATACACCTGTCAAGATAGAA
AATCGACCGCCACAAGCACCCCGTAAAAACAAAATGGCGGCTGGGGACCA
AATCGATTACGTCAACAATGCATTGTCATGGTTACAAACGGAGCTTGAAC
TTTTGAAACGTGAAGATAAAGAGCCGTTATGTTTTTATAAGAACCTTATG
ACCACGGTCAATAATTTAAAACGTGTGACCACTACTTTCAAAGAACAATC
GGACACGTTATGTAAAATACCAAATAGTATTGAAAATGCCGAACACGATA
AAATTCGAAAACTAAATTCATCCACGAACACTCTTGAAAAGGGAATATAT
GAGCAAGGGAAAGAAAAAAGTTCCGTTGGTACTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038269XLOC_038269Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060961-exon-scaffold_350-1575043694:70251..70404TCONS_00060961-exon-scaffold_350-1575043694:70251..70404Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1575043694:69632..69779TCONS_00060961-exon-scaffold_350-1575043694:69632..69779Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1575043694:59870..60984TCONS_00060961-exon-scaffold_350-1575043694:59870..60984Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1510915933:70251..70404TCONS_00060961-exon-scaffold_350-1510915933:70251..70404Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1510915933:69632..69779TCONS_00060961-exon-scaffold_350-1510915933:69632..69779Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1510915933:59870..60984TCONS_00060961-exon-scaffold_350-1510915933:59870..60984Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1491911889:70251..70404TCONS_00060961-exon-scaffold_350-1491911889:70251..70404Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1491911889:69632..69779TCONS_00060961-exon-scaffold_350-1491911889:69632..69779Clytia hemisphaericaexon
TCONS_00060961-exon-scaffold_350-1491911889:59870..60984TCONS_00060961-exon-scaffold_350-1491911889:59870..60984Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060961-proteinTCONS_00060961-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:59870..70404 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.00182	0.947425	0.382008	0.302113	74.5667	61.7132	90.7723	99.0692	25.5237	58.455	37.58	15.806	28.3771	44.2224	20.7297	13.2364	17.9935	29.675	24.1406	30.9509	27.1937	17.3585	21.6921	23.3335	23.5569	26.6725	186.189	83.5261	15.8165	14.6564
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060961 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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