TCONS_00060975 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00060975
Unique Name	TCONS_00060975
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2738

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_350:180438..185042-
coding sequence from alignment at scaffold_350:180438..185042-

transcript sequence

>TCONS_00060975 ID=TCONS_00060975|Name=TCONS_00060975|organism=Clytia hemisphaerica|type=transcript|length=2738bp
GAGAACTTCAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAGAGATTG
AGAATCCCTTTTCACAGGATGAAAGTAGAAGGAGAAgATACGATTGCAAT
ACGACGAGCGCGGAATGTGTTATTGGTCACTGCTAGCTTGTGTTTGGTCA
CTTTCATCACATTAGGTGTCTGTTTCTTGGATGTACCTAAAATTGTAAGc
gaAGATGAGACTACGTTGAACACGCAGTCGCCTGTCTCAGATAACAGGTG
GCCAAGACGAAACGTCAAACATTTGTCTTTCTTATGGAATGATCACGTCT
ACACTCAGCGTGTGAAAGACATCAAAAAGGTTTTGGAGAAGAAGTTGGAA
ACAGAGAGTGAACCGATTTACTTGTTGTCGGTGACCAAGGATAGTTCAGT
TGTGATGATGGCTATGAAAGCTGGTTGGAAACGAGCATGCCATCGCCATC
CTGTACATCTAAAGCTAGAGGTTTTGGAAGGTGAAATGTATTTCAAATCT
CACGAAATGAAGAATACGATTCACATGAAGCCTGGTGACGAAATGGTCAT
TCCAAAATGGCAGCCTCATTACGAAGGTGTACAAGGACGTAGAACAGTTT
TTGTAATTATCACACTCTCACCAAATTGTCCACCtgacaaaattgttgaa
atgTTAAATGCTGACGAATGTGATTCTGAAAAGAATCCTCCGTTGACGTT
CCCTCCTATTCATGAGATGGACCAGCCTGTTGACAACCAGCTCCCCGACA
CGTGGTCAGCCACCATTGTCCTGCATCCGTTTAGTGAAGAACAAGGGACT
GGACCCGAACGagattttcctttctttcaaCTCAGTCATGGTCAGATGAC
CTATGATTATCAAAAAGGTGAAATGTTGATTTATGTAAAGGGATGTCTTT
ACGGTGAATGGTGGTTTAATGTGACCACGCATGCTACGTTCGTGGCCAGA
AATTCGTCAATGCAGTGGAAAAAGATCGATTTGGGATGGACATTACCGGG
CAAGAATTGGATTGATCCAGAAGACAAATACATCGGACATTCTCAACTGA
ATTGGATGAATGATGAAGTTGACGTTGATTggtggaaaaaaaattacaaa
aatacctCCACCTGGACATGGTTCGATCGGAATAATGACGGTTTCCCGTT
TCGGATTATGTTTTCCGCTCCACCCAGAAGCAACTTGAAAGGCGAACCCG
ATAATTTGGCGTTCTTTCAAATGTACTCATTCTCGTTCATCGTCAACGCA
AAACCAGAGCCAATCCACCACTCACGACTTCATATCATGGATATCGGAAA
AATCGGATTAACATGTGGTAATCCCGATAATTTCCAAGTTTTCAACTGGA
CCAATCACTTTTCAGTATCTGCTCACATGATTCCAGTAGATTACCCGCAC
AACCCGTACCCAACCAAAGTGTACTATCGCTGGAATGACGACGAAGAATA
CACAGGCGCACCTTTTGACCGCTCCCAGTCTACCATCTTTTATCACGATT
ACAACCGTTTCGAACGAATGGAAGGAATAAGAGCAGATTTATTTGGCCAT
TGGAATAGCACTACCAAACCTCGTCCAGGGGTAGGCTTTCTTTTGAAGAC
AGCAATCGATAGTCGGCAGACAGAATGTTCACAAATGTTTGCTGGTGAAA
TGCCGATCGCCCAACAACCGCCATGGTGGCCACAACTCGGTCAAGCAAAC
ATCCAAGCGATCATCAGAAGACCGGAAAATGCTTCAGACGAATGGAGATC
ACCCCTCACCGGAAGCGATCGAACCGTCGCTATTATCCGCGTCACTTTTC
CCTCTCATTTACCGAATTTTCCGAACTCAACTAGCCTCTGGACCTGGTAC
GATTATACCGATTTCATTCAGGCTAAAGCTGCAGCCCGTCCTATCGTGTT
CATGCAATCTGCTCCTAAATTTGAATTGGGAACTAGTCTTGCGTTGGcgg
atttttttgattttcatgttTTACCAGACACTGTTCATTCTCGGACACCC
CTTGATTTAGAAAACTTGAACACATTTTGTAATATCACTCTTTGAAGTTA
ACTTTTAAAGTTTTGTATATACACTTGCTCTCGATTAGTAAATGTAATCa
tatgataacgagtgcaattcgatcAGCTGATCACACAATTGGTTTCActa
cacacccctgtctcacagacccactgggaccccagcctcactggaaaatt
tggcaaaaatttcgtctccggtgagaaattgactttgatttcgtcccctt
tcgaaattccatgtgtaaagttgcacttcaaaaccatccccgctggatat
tttaaccttggaacaatagaatttttatcttcattgggatttcaatagga
attttttaacattggaacaatagaatttttatcctcattgggatttcaat
aggaatttttatcgccgctgaggaaaaaagttccaccggggctgtgagac
tgGTGTCACTACTTTTTTCCCATTAGGGAATTAAATTACActgaaaattt
tatatttttctctatgttttcttttattgttatttatggattttctttct
cacaaaatcaaTTTCGAATGCGTTCGATGAAAaaatgcaagaataaacaa
taaaatcaatttGGTAAACATTTGCGCGGTATTGAAGAGTGAGTAATGAT
TAATTGCtttctacaggatgcaattaacgattaattgcattATTAATTAA
GGTACgacaaatagaccttttcataaattacgaacatc

Run BLAST on NCBI

protein sequence of TCONS_00060975-protein

>TCONS_00060975-protein ID=TCONS_00060975-protein|Name=TCONS_00060975-protein|organism=Clytia hemisphaerica|type=polypeptide|length=680bp
ELQFGRCRGRMQDQRLRIPFHRMKVEGEDTIAIRRARNVLLVTASLCLVT
FITLGVCFLDVPKIVSEDETTLNTQSPVSDNRWPRRNVKHLSFLWNDHVY
TQRVKDIKKVLEKKLETESEPIYLLSVTKDSSVVMMAMKAGWKRACHRHP
VHLKLEVLEGEMYFKSHEMKNTIHMKPGDEMVIPKWQPHYEGVQGRRTVF
VIITLSPNCPPDKIVEMLNADECDSEKNPPLTFPPIHEMDQPVDNQLPDT
WSATIVLHPFSEEQGTGPERDFPFFQLSHGQMTYDYQKGEMLIYVKGCLY
GEWWFNVTTHATFVARNSSMQWKKIDLGWTLPGKNWIDPEDKYIGHSQLN
WMNDEVDVDWWKKNYKNTSTWTWFDRNNDGFPFRIMFSAPPRSNLKGEPD
NLAFFQMYSFSFIVNAKPEPIHHSRLHIMDIGKIGLTCGNPDNFQVFNWT
NHFSVSAHMIPVDYPHNPYPTKVYYRWNDDEEYTGAPFDRSQSTIFYHDY
NRFERMEGIRADLFGHWNSTTKPRPGVGFLLKTAIDSRQTECSQMFAGEM
PIAQQPPWWPQLGQANIQAIIRRPENASDEWRSPLTGSDRTVAIIRVTFP
SHLPNFPNSTSLWTWYDYTDFIQAKAAARPIVFMQSAPKFELGTSLALAD
FFDFHVLPDTVHSRTPLDLENLNTFCNITL

Run BLAST on NCBI

transcript from alignment at scaffold_350:180438..185042-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00060975 ID=TCONS_00060975|Name=TCONS_00060975|organism=Clytia hemisphaerica|type=transcript|length=4605bp|location=Sequence derived from alignment at scaffold_350:180438..185042- (Clytia hemisphaerica)
GAGAACTTCAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAGAGATTG
AGAATCCCTTTTCACAGGATGAAAGTAGAAGGAGAAGGTATTGAAAAATT
TATTTTTTGTTCCACTCAACCTGAAAATAATCTTATTTTACTGTCCATTA
TTATACCACTCGATATTCCGGAACATCTTATTCATGCATGGCACTCCAAA
AATGTCATCCTCTCACATATTGCTAAATATGCTTCGTAGGACTTTAGACA
TGCTATTCTAATATTGCTACCTGCTCAGATTTGTGAATGTTTTGTTAAAC
TGTAGAATATATCTTTTTACCATACTAGATTTCAGAACAATTTTATCGTT
TTAGATACGATTGCAATACGACGAGCGCGGAATGTGTTATTGGTCACTGC
TAGCTTGTGTTTGGTCACTTTCATCACATTAGGTGTCTGTTTCTTGGATG
TACCTAAAATTGTAAGGTAAGTGGATATTTACAGTTTCCAGTCTTATTTC
AACGTTGTTCGTCAGTTGGATTACGTCATTGGTTGTAGAATACATTCATT
TTGTTTTATAAGCATACCTAGGCTCTGTTTCGGTAGAAAATATGCATAAT
GCTAAGCATACCTTCAAGCTGAAATGCTAAAATAATCGTGCAGCTTAGAT
CATATTTTTAAAAACATACACATTTGGAGGCTGTCAGCAATGTTTTTGAC
TAATGACTAGCATATAAATAAGTATAAATTAAGGCTGAAAATGAGATTTT
GTTAAGCACATTTGAGCCTCGACCCGATTTTCCCGTATGCTTATAAAACC
AAATGAGTGAATTCTCCCAGTTTATTTCTCCATAAACATATAAACGACTG
GACATCCATCTCCTTTGTCTTTTTGTAGAAAAGGCTGCTAGCTTCGTTGC
CGCCTCGTTAAAAGCATAAAATGAAACAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTTGTTGTCGCTATAAAAAATCTGCATAATTAGCGTGTTG
TGACAAAATTCTTTTGTTTCAAGCCTGATTATGCGCAAACTTTTAGGGCT
TATATTTTGGATACAAAGATAACAGAGGCAAAATCATCGTCAGCTTGTCA
AAACTCCGACTAATATTTCTAAATTTTGACTTAAAAGTGTCTAATTATTT
TAGAGAGTGTCACATTCTAATTTCGATTTTCTTGCGAAACAGGCTCTCAA
CTTTGGCAAGCTATTTTTTTCAAGTCATAAAAAAAATTATTTGAGTGACA
AAAGGGATTCAAAAGTATACACGCAGTTGAAATTCTGCATTTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAAATATATTGCAAACTTGTGAAAAAATTCGAAAATAATTTTT
TTGTACATTAGGAGTAATGTTCAAGCTCTATCAATCCTTTTACCTAAATA
ATTCAAAGAAATAAAATTATGACGGAATATTGTCGGATTTTTCGTACCAA
TTTTGAAATACAAGCGGCAACGAAGCTCGCTTCAAAGAGACAATAAAAGA
TAGACGTCCAGTCGTTTATATGTTCATGATTTCTCAATTATGACAATTGC
ATTTTTTTTTTGAGACAGACTTTAAGTTGAATTGTAACCAAATAACCAGT
TCTCGAACAATTACGTTTTTTTTATTTTCAGCGAAGATGAGACTACGTTG
AACACGCAGTCGCCTGTCTCAGGTAAGACGAAAAATATTTTCGATTGCAA
AGGAGGTCAAGTGGTATCTCGTCCTACCACCTTTTAACTTTTCATGCGTT
TTACTGTCTCAATCTTCAACATCACCAAACTTACCGAATTTTCTTTGGTC
ATAACATAAACACACGCAAAAATGAATCAAGGTGGTATTTGCTAGGCTGC
TAACATTCTTCTTTAATATGTTTTCGTAGAGCGAAAACTTTTTCAAGGAT
ACTGCACTGCGTAGTCAAAGGAACCAATGAACTAGCAATCACTTTCTTAT
TTTGTAGATAACAGGTGGCCAAGACGAAACGTCAAACATTTGTCTTTCTT
ATGGAATGATCACGTCTACACTCAGCGTGTGAAAGACATCAAAAAGGTTT
TGGAGAAGAAGTTGGAAACAGAGAGTGAACCGATTTACTTGTTGTCGGTG
ACCAAGGATAGTTCAGTTGTGATGATGGCTATGAAAGCTGGTTGGAAACG
AGCATGCCATCGCCATCCTGTACATCTAAAGCTAGAGGTTTTGGAAGGTG
AAATGTATTTCAAATCTCACGAAATGAAGAATACGATTCACATGAAGCCT
GGTGACGAAATGGTCATTCCAAAATGGCAGCCTCATTACGAAGGTGTACA
AGGACGTAGAACAGTTTTTGTAATTATCACACTCTCACCAAATTGTCCAC
CTGACAAAATTGTTGAAATGTTAAATGCTGACGAATGTGATTCTGAAAAG
AATCCTCCGTTGACGTTCCCTCCTATTCATGAGATGGACCAGCCTGTTGA
CAACCAGCTCCCCGACACGTGGTCAGCCACCATTGTCCTGCATCCGTTTA
GTGAAGAACAAGGGACTGGACCCGAACGAGATTTTCCTTTCTTTCAACTC
AGTCATGGTCAGATGACCTATGATTATCAAAAAGGTGAAATGTTGATTTA
TGTAAAGGGATGTCTTTACGGTGAATGGTGGTTTAATGTGACCACGCATG
CTACGTTCGTGGCCAGAAATTCGTCAATGCAGTGGAAAAAGATCGATTTG
GGATGGACATTACCGGGCAAGAATTGGATTGATCCAGAAGACAAATACAT
CGGACATTCTCAACTGAATTGGATGAATGATGAAGTTGACGTTGATTGGT
GGAAAAAAAATTACAAAAATACCTCCACCTGGACATGGTTCGATCGGAAT
AATGACGGTTTCCCGTTTCGGATTATGTTTTCCGCTCCACCCAGAAGCAA
CTTGAAAGGCGAACCCGATAATTTGGCGTTCTTTCAAATGTACTCATTCT
CGTTCATCGTCAACGCAAAACCAGAGCCAATCCACCACTCACGACTTCAT
ATCATGGATATCGGAAAAATCGGATTAACATGTGGTAATCCCGATAATTT
CCAAGTTTTCAACTGGACCAATCACTTTTCAGTATCTGCTCACATGATTC
CAGTAGATTACCCGCACAACCCGTACCCAACCAAAGTGTACTATCGCTGG
AATGACGACGAAGAATACACAGGCGCACCTTTTGACCGCTCCCAGTCTAC
CATCTTTTATCACGATTACAACCGTTTCGAACGAATGGAAGGAATAAGAG
CAGATTTATTTGGCCATTGGAATAGCACTACCAAACCTCGTCCAGGGGTA
GGCTTTCTTTTGAAGACAGCAATCGATAGTCGGCAGACAGAATGTTCACA
AATGTTTGCTGGTGAAATGCCGATCGCCCAACAACCGCCATGGTGGCCAC
AACTCGGTCAAGCAAACATCCAAGCGATCATCAGAAGACCGGAAAATGCT
TCAGACGAATGGAGATCACCCCTCACCGGAAGCGATCGAACCGTCGCTAT
TATCCGCGTCACTTTTCCCTCTCATTTACCGAATTTTCCGAACTCAACTA
GCCTCTGGACCTGGTACGATTATACCGATTTCATTCAGGCTAAAGCTGCA
GCCCGTCCTATCGTGTTCATGCAATCTGCTCCTAAATTTGAATTGGGAAC
TAGTCTTGCGTTGGCGGATTTTTTTGATTTTCATGTTTTACCAGACACTG
TTCATTCTCGGACACCCCTTGATTTAGAAAACTTGAACACATTTTGTAAT
ATCACTCTTTGAAGTTAACTTTTAAAGTTTTGTATATACACTTGCTCTCG
ATTAGTAAATGTAATCATATGATAACGAGTGCAATTCGATCAGCTGATCA
CACAATTGGTTTCACTACACACCCCTGTCTCACAGACCCACTGGGACCCC
AGCCTCACTGGAAAATTTGGCAAAAATTTCGTCTCCGGTGAGAAATTGAC
TTTGATTTCGTCCCCTTTCGAAATTCCATGTGTAAAGTTGCACTTCAAAA
CCATCCCCGCTGGATATTTTAACCTTGGAACAATAGAATTTTTATCTTCA
TTGGGATTTCAATAGGAATTTTTTAACATTGGAACAATAGAATTTTTATC
CTCATTGGGATTTCAATAGGAATTTTTATCGCCGCTGAGGAAAAAAGTTC
CACCGGGGCTGTGAGACTGGTGTCACTACTTTTTTCCCATTAGGGAATTA
AATTACACTGAAAATTTTATATTTTTCTCTATGTTTTCTTTTATTGTTAT
TTATGGATTTTCTTTCTCACAAAATCAATTTCGAATGCGTTCGATGAAAA
AATGCAAGAATAAACAATAAAATCAATTTGGTAAACATTTGCGCGGTATT
GAAGAGTGAGTAATGATTAATTGCTTTCTACAGGATGCAATTAACGATTA
ATTGCATTATTAATTAAGGTACGACAAATAGACCTTTTCATAAATTACGA
ACATC

Coding sequence (CDS) from alignment at scaffold_350:180438..185042-

>TCONS_00060975 ID=TCONS_00060975|Name=TCONS_00060975|organism=Clytia hemisphaerica|type=CDS|length=8172bp|location=Sequence derived from alignment at scaffold_350:180438..185042- (Clytia hemisphaerica)
ATAACAGGTGGCCAAGACGAAACGTCAAACATTTGTCTTTCTTATGGAAT
GATCACGTCTACACTCAGCGTGTGAAAGACATCAAAAAGGTTTTGGAGAA
GAAGTTGGAAACAGAGAGTGAACCGATTTACTTGTTGTCGGTGACCAAGG
ATAGTTCAGTTGTGATGATGGCTATGAAAGCTGGTTGGAAACGAGCATGC
CATCGCCATCCTGTACATCTAAAGCTAGAGGTTTTGGAAGGTGAAATGTA
TTTCAAATCTCACGAAATGAAGAATACGATTCACATGAAGCCTGGTGACG
AAATGGTCATTCCAAAATGGCAGCCTCATTACGAAGGTGTACAAGGACGT
AGAACAGTTTTTGTAATTATCACACTCTCACCAAATTGTCCACCTGACAA
AATTGTTGAAATGTTAAATGCTGACGAATGTGATTCTGAAAAGAATCCTC
CGTTGACGTTCCCTCCTATTCATGAGATGGACCAGCCTGTTGACAACCAG
CTCCCCGACACGTGGTCAGCCACCATTGTCCTGCATCCGTTTAGTGAAGA
ACAAGGGACTGGACCCGAACGAGATTTTCCTTTCTTTCAACTCAGTCATG
GTCAGATGACCTATGATTATCAAAAAGGTGAAATGTTGATTTATGTAAAG
GGATGTCTTTACGGTGAATGGTGGTTTAATGTGACCACGCATGCTACGTT
CGTGGCCAGAAATTCGTCAATGCAGTGGAAAAAGATCGATTTGGGATGGA
CATTACCGGGCAAGAATTGGATTGATCCAGAAGACAAATACATCGGACAT
TCTCAACTGAATTGGATGAATGATGAAGTTGACGTTGATTGGTGGAAAAA
AAATTACAAAAATACCTCCACCTGGACATGGTTCGATCGGAATAATGACG
GTTTCCCGTTTCGGATTATGTTTTCCGCTCCACCCAGAAGCAACTTGAAA
GGCGAACCCGATAATTTGGCGTTCTTTCAAATGTACTCATTCTCGTTCAT
CGTCAACGCAAAACCAGAGCCAATCCACCACTCACGACTTCATATCATGG
ATATCGGAAAAATCGGATTAACATGTGGTAATCCCGATAATTTCCAAGTT
TTCAACTGGACCAATCACTTTTCAGTATCTGCTCACATGATTCCAGTAGA
TTACCCGCACAACCCGTACCCAACCAAAGTGTACTATCGCTGGAATGACG
ACGAAGAATACACAGGCGCACCTTTTGACCGCTCCCAGTCTACCATCTTT
TATCACGATTACAACCGTTTCGAACGAATGGAAGGAATAAGAGCAGATTT
ATTTGGCCATTGGAATAGCACTACCAAACCTCGTCCAGGGGTAGGCTTTC
TTTTGAAGACAGCAATCGATAGTCGGCAGACAGAATGTTCACAAATGTTT
GCTGGTGAAATGCCGATCGCCCAACAACCGCCATGGTGGCCACAACTCGG
TCAAGCAAACATCCAAGCGATCATCAGAAGACCGGAAAATGCTTCAGACG
AATGGAGATCACCCCTCACCGGAAGCGATCGAACCGTCGCTATTATCCGC
GTCACTTTTCCCTCTCATTTACCGAATTTTCCGAACTCAACTAGCCTCTG
GACCTGGTACGATTATACCGATTTCATTCAGGCTAAAGCTGCAGCCCGTC
CTATCGTGTTCATGCAATCTGCTCCTAAATTTGAATTGGGAACTAGTCTT
GCGTTGGCGGATTTTTTTGATTTTCATGTTTTACCAGACACTGTTCATTC
TCGGACACCCCTTGATTTAGAAAACTTGAACACATTTTGTAATATCACTC
TTTGACGAAGATGAGACTACGTTGAACACGCAGTCGCCTGTCTCAGATAC
GATTGCAATACGACGAGCGCGGAATGTGTTATTGGTCACTGCTAGCTTGT
GTTTGGTCACTTTCATCACATTAGGTGTCTGTTTCTTGGATGTACCTAAA
ATTGTAAGGAACTTCAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAG
AGATTGAGAATCCCTTTTCACAGGATGAAAGTAGAAGGAGAAGATAACAG
GTGGCCAAGACGAAACGTCAAACATTTGTCTTTCTTATGGAATGATCACG
TCTACACTCAGCGTGTGAAAGACATCAAAAAGGTTTTGGAGAAGAAGTTG
GAAACAGAGAGTGAACCGATTTACTTGTTGTCGGTGACCAAGGATAGTTC
AGTTGTGATGATGGCTATGAAAGCTGGTTGGAAACGAGCATGCCATCGCC
ATCCTGTACATCTAAAGCTAGAGGTTTTGGAAGGTGAAATGTATTTCAAA
TCTCACGAAATGAAGAATACGATTCACATGAAGCCTGGTGACGAAATGGT
CATTCCAAAATGGCAGCCTCATTACGAAGGTGTACAAGGACGTAGAACAG
TTTTTGTAATTATCACACTCTCACCAAATTGTCCACCTGACAAAATTGTT
GAAATGTTAAATGCTGACGAATGTGATTCTGAAAAGAATCCTCCGTTGAC
GTTCCCTCCTATTCATGAGATGGACCAGCCTGTTGACAACCAGCTCCCCG
ACACGTGGTCAGCCACCATTGTCCTGCATCCGTTTAGTGAAGAACAAGGG
ACTGGACCCGAACGAGATTTTCCTTTCTTTCAACTCAGTCATGGTCAGAT
GACCTATGATTATCAAAAAGGTGAAATGTTGATTTATGTAAAGGGATGTC
TTTACGGTGAATGGTGGTTTAATGTGACCACGCATGCTACGTTCGTGGCC
AGAAATTCGTCAATGCAGTGGAAAAAGATCGATTTGGGATGGACATTACC
GGGCAAGAATTGGATTGATCCAGAAGACAAATACATCGGACATTCTCAAC
TGAATTGGATGAATGATGAAGTTGACGTTGATTGGTGGAAAAAAAATTAC
AAAAATACCTCCACCTGGACATGGTTCGATCGGAATAATGACGGTTTCCC
GTTTCGGATTATGTTTTCCGCTCCACCCAGAAGCAACTTGAAAGGCGAAC
CCGATAATTTGGCGTTCTTTCAAATGTACTCATTCTCGTTCATCGTCAAC
GCAAAACCAGAGCCAATCCACCACTCACGACTTCATATCATGGATATCGG
AAAAATCGGATTAACATGTGGTAATCCCGATAATTTCCAAGTTTTCAACT
GGACCAATCACTTTTCAGTATCTGCTCACATGATTCCAGTAGATTACCCG
CACAACCCGTACCCAACCAAAGTGTACTATCGCTGGAATGACGACGAAGA
ATACACAGGCGCACCTTTTGACCGCTCCCAGTCTACCATCTTTTATCACG
ATTACAACCGTTTCGAACGAATGGAAGGAATAAGAGCAGATTTATTTGGC
CATTGGAATAGCACTACCAAACCTCGTCCAGGGGTAGGCTTTCTTTTGAA
GACAGCAATCGATAGTCGGCAGACAGAATGTTCACAAATGTTTGCTGGTG
AAATGCCGATCGCCCAACAACCGCCATGGTGGCCACAACTCGGTCAAGCA
AACATCCAAGCGATCATCAGAAGACCGGAAAATGCTTCAGACGAATGGAG
ATCACCCCTCACCGGAAGCGATCGAACCGTCGCTATTATCCGCGTCACTT
TTCCCTCTCATTTACCGAATTTTCCGAACTCAACTAGCCTCTGGACCTGG
TACGATTATACCGATTTCATTCAGGCTAAAGCTGCAGCCCGTCCTATCGT
GTTCATGCAATCTGCTCCTAAATTTGAATTGGGAACTAGTCTTGCGTTGG
CGGATTTTTTTGATTTTCATGTTTTACCAGACACTGTTCATTCTCGGACA
CCCCTTGATTTAGAAAACTTGAACACATTTTGTAATATCACTCTTTGACG
AAGATGAGACTACGTTGAACACGCAGTCGCCTGTCTCAGATACGATTGCA
ATACGACGAGCGCGGAATGTGTTATTGGTCACTGCTAGCTTGTGTTTGGT
CACTTTCATCACATTAGGTGTCTGTTTCTTGGATGTACCTAAAATTGTAA
GGAACTTCAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAGAGATTGA
GAATCCCTTTTCACAGGATGAAAGTAGAAGGAGAAGATAACAGGTGGCCA
AGACGAAACGTCAAACATTTGTCTTTCTTATGGAATGATCACGTCTACAC
TCAGCGTGTGAAAGACATCAAAAAGGTTTTGGAGAAGAAGTTGGAAACAG
AGAGTGAACCGATTTACTTGTTGTCGGTGACCAAGGATAGTTCAGTTGTG
ATGATGGCTATGAAAGCTGGTTGGAAACGAGCATGCCATCGCCATCCTGT
ACATCTAAAGCTAGAGGTTTTGGAAGGTGAAATGTATTTCAAATCTCACG
AAATGAAGAATACGATTCACATGAAGCCTGGTGACGAAATGGTCATTCCA
AAATGGCAGCCTCATTACGAAGGTGTACAAGGACGTAGAACAGTTTTTGT
AATTATCACACTCTCACCAAATTGTCCACCTGACAAAATTGTTGAAATGT
TAAATGCTGACGAATGTGATTCTGAAAAGAATCCTCCGTTGACGTTCCCT
CCTATTCATGAGATGGACCAGCCTGTTGACAACCAGCTCCCCGACACGTG
GTCAGCCACCATTGTCCTGCATCCGTTTAGTGAAGAACAAGGGACTGGAC
CCGAACGAGATTTTCCTTTCTTTCAACTCAGTCATGGTCAGATGACCTAT
GATTATCAAAAAGGTGAAATGTTGATTTATGTAAAGGGATGTCTTTACGG
TGAATGGTGGTTTAATGTGACCACGCATGCTACGTTCGTGGCCAGAAATT
CGTCAATGCAGTGGAAAAAGATCGATTTGGGATGGACATTACCGGGCAAG
AATTGGATTGATCCAGAAGACAAATACATCGGACATTCTCAACTGAATTG
GATGAATGATGAAGTTGACGTTGATTGGTGGAAAAAAAATTACAAAAATA
CCTCCACCTGGACATGGTTCGATCGGAATAATGACGGTTTCCCGTTTCGG
ATTATGTTTTCCGCTCCACCCAGAAGCAACTTGAAAGGCGAACCCGATAA
TTTGGCGTTCTTTCAAATGTACTCATTCTCGTTCATCGTCAACGCAAAAC
CAGAGCCAATCCACCACTCACGACTTCATATCATGGATATCGGAAAAATC
GGATTAACATGTGGTAATCCCGATAATTTCCAAGTTTTCAACTGGACCAA
TCACTTTTCAGTATCTGCTCACATGATTCCAGTAGATTACCCGCACAACC
CGTACCCAACCAAAGTGTACTATCGCTGGAATGACGACGAAGAATACACA
GGCGCACCTTTTGACCGCTCCCAGTCTACCATCTTTTATCACGATTACAA
CCGTTTCGAACGAATGGAAGGAATAAGAGCAGATTTATTTGGCCATTGGA
ATAGCACTACCAAACCTCGTCCAGGGGTAGGCTTTCTTTTGAAGACAGCA
ATCGATAGTCGGCAGACAGAATGTTCACAAATGTTTGCTGGTGAAATGCC
GATCGCCCAACAACCGCCATGGTGGCCACAACTCGGTCAAGCAAACATCC
AAGCGATCATCAGAAGACCGGAAAATGCTTCAGACGAATGGAGATCACCC
CTCACCGGAAGCGATCGAACCGTCGCTATTATCCGCGTCACTTTTCCCTC
TCATTTACCGAATTTTCCGAACTCAACTAGCCTCTGGACCTGGTACGATT
ATACCGATTTCATTCAGGCTAAAGCTGCAGCCCGTCCTATCGTGTTCATG
CAATCTGCTCCTAAATTTGAATTGGGAACTAGTCTTGCGTTGGCGGATTT
TTTTGATTTTCATGTTTTACCAGACACTGTTCATTCTCGGACACCCCTTG
ATTTAGAAAACTTGAACACATTTTGTAATATCACTCTTTGACGAAGATGA
GACTACGTTGAACACGCAGTCGCCTGTCTCAGATACGATTGCAATACGAC
GAGCGCGGAATGTGTTATTGGTCACTGCTAGCTTGTGTTTGGTCACTTTC
ATCACATTAGGTGTCTGTTTCTTGGATGTACCTAAAATTGTAAGGAACTT
CAGTTTGGACGTTGCAGAGGAAGGATGCAGGACCAGAGATTGAGAATCCC
TTTTCACAGGATGAAAGTAGAAGGAGAAGATAACAGGTGGCCAAGACGAA
ACGTCAAACATTTGTCTTTCTTATGGAATGATCACGTCTACACTCAGCGT
GTGAAAGACATCAAAAAGGTTTTGGAGAAGAAGTTGGAAACAGAGAGTGA
ACCGATTTACTTGTTGTCGGTGACCAAGGATAGTTCAGTTGTGATGATGG
CTATGAAAGCTGGTTGGAAACGAGCATGCCATCGCCATCCTGTACATCTA
AAGCTAGAGGTTTTGGAAGGTGAAATGTATTTCAAATCTCACGAAATGAA
GAATACGATTCACATGAAGCCTGGTGACGAAATGGTCATTCCAAAATGGC
AGCCTCATTACGAAGGTGTACAAGGACGTAGAACAGTTTTTGTAATTATC
ACACTCTCACCAAATTGTCCACCTGACAAAATTGTTGAAATGTTAAATGC
TGACGAATGTGATTCTGAAAAGAATCCTCCGTTGACGTTCCCTCCTATTC
ATGAGATGGACCAGCCTGTTGACAACCAGCTCCCCGACACGTGGTCAGCC
ACCATTGTCCTGCATCCGTTTAGTGAAGAACAAGGGACTGGACCCGAACG
AGATTTTCCTTTCTTTCAACTCAGTCATGGTCAGATGACCTATGATTATC
AAAAAGGTGAAATGTTGATTTATGTAAAGGGATGTCTTTACGGTGAATGG
TGGTTTAATGTGACCACGCATGCTACGTTCGTGGCCAGAAATTCGTCAAT
GCAGTGGAAAAAGATCGATTTGGGATGGACATTACCGGGCAAGAATTGGA
TTGATCCAGAAGACAAATACATCGGACATTCTCAACTGAATTGGATGAAT
GATGAAGTTGACGTTGATTGGTGGAAAAAAAATTACAAAAATACCTCCAC
CTGGACATGGTTCGATCGGAATAATGACGGTTTCCCGTTTCGGATTATGT
TTTCCGCTCCACCCAGAAGCAACTTGAAAGGCGAACCCGATAATTTGGCG
TTCTTTCAAATGTACTCATTCTCGTTCATCGTCAACGCAAAACCAGAGCC
AATCCACCACTCACGACTTCATATCATGGATATCGGAAAAATCGGATTAA
CATGTGGTAATCCCGATAATTTCCAAGTTTTCAACTGGACCAATCACTTT
TCAGTATCTGCTCACATGATTCCAGTAGATTACCCGCACAACCCGTACCC
AACCAAAGTGTACTATCGCTGGAATGACGACGAAGAATACACAGGCGCAC
CTTTTGACCGCTCCCAGTCTACCATCTTTTATCACGATTACAACCGTTTC
GAACGAATGGAAGGAATAAGAGCAGATTTATTTGGCCATTGGAATAGCAC
TACCAAACCTCGTCCAGGGGTAGGCTTTCTTTTGAAGACAGCAATCGATA
GTCGGCAGACAGAATGTTCACAAATGTTTGCTGGTGAAATGCCGATCGCC
CAACAACCGCCATGGTGGCCACAACTCGGTCAAGCAAACATCCAAGCGAT
CATCAGAAGACCGGAAAATGCTTCAGACGAATGGAGATCACCCCTCACCG
GAAGCGATCGAACCGTCGCTATTATCCGCGTCACTTTTCCCTCTCATTTA
CCGAATTTTCCGAACTCAACTAGCCTCTGGACCTGGTACGATTATACCGA
TTTCATTCAGGCTAAAGCTGCAGCCCGTCCTATCGTGTTCATGCAATCTG
CTCCTAAATTTGAATTGGGAACTAGTCTTGCGTTGGCGGATTTTTTTGAT
TTTCATGTTTTACCAGACACTGTTCATTCTCGGACACCCCTTGATTTAGA
AAACTTGAACACATTTTGTAATATCACTCTTTGACGAAGATGAGACTACG
TTGAACACGCAGTCGCCTGTCTCAGATACGATTGCAATACGACGAGCGCG
GAATGTGTTATTGGTCACTGCTAGCTTGTGTTTGGTCACTTTCATCACAT
TAGGTGTCTGTTTCTTGGATGTACCTAAAATTGTAAGGAACTTCAGTTTG
GACGTTGCAGAGGAAGGATGCAGGACCAGAGATTGAGAATCCCTTTTCAC
AGGATGAAAGTAGAAGGAGAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_038275	XLOC_038275	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00060975-exon-scaffold_350-1575043694:184956..185042	TCONS_00060975-exon-scaffold_350-1575043694:184956..185042	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1575043694:184577..184688	TCONS_00060975-exon-scaffold_350-1575043694:184577..184688	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1575043694:183221..183261	TCONS_00060975-exon-scaffold_350-1575043694:183221..183261	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1575043694:180438..182935	TCONS_00060975-exon-scaffold_350-1575043694:180438..182935	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1510915933:184956..185042	TCONS_00060975-exon-scaffold_350-1510915933:184956..185042	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1510915933:184577..184688	TCONS_00060975-exon-scaffold_350-1510915933:184577..184688	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1510915933:183221..183261	TCONS_00060975-exon-scaffold_350-1510915933:183221..183261	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1510915933:180438..182935	TCONS_00060975-exon-scaffold_350-1510915933:180438..182935	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1491911889:184956..185042	TCONS_00060975-exon-scaffold_350-1491911889:184956..185042	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1491911889:184577..184688	TCONS_00060975-exon-scaffold_350-1491911889:184577..184688	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1491911889:183221..183261	TCONS_00060975-exon-scaffold_350-1491911889:183221..183261	Clytia hemisphaerica	exon
TCONS_00060975-exon-scaffold_350-1491911889:180438..182935	TCONS_00060975-exon-scaffold_350-1491911889:180438..182935	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00060975-protein	TCONS_00060975-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_350	supercontig	scaffold_350:180438..185042 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.750607	0.70696	0.52416	0.415082	0.113508	0.124154	0.0594534	0.177118	0.202111	0.140789	0.113272	0.316034	0.301556	0.281813	0.179281	0.219273	4.03034	5.00275	0.442655	0.216581	13.0344	12.861	11.822	17.6355	54.8244	45.784	45.4539	109.357	0.513823	0.412458

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR011051	RmlC_Cupin

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00060975 vs. Swiss-Prot (Human)

BLAST of TCONS_00060975 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00060975 (transcript) - C. hemisphaerica