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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060991 ID=TCONS_00060991|Name=TCONS_00060991|organism=Clytia hemisphaerica|type=transcript|length=748bp
CCGAAAACACACCAGTAAGATCTTTAAGGTGTGATCGAATATCATCCAAA
CTCATAATCGCCAATTGCTCAGAAGTGTATACAGATGTACTGATAACATT
TTGGTCCCATTTGAGCGTTGGAAACTTATCGAAAAGTCGATTCTCAGCTA
TGGGGCTTACGGTAAGGTCTGATGGATGGTAAAGATGATCTAGAACGTTG
ACGTCAGGACCTCCAAGGTATGGAATGATATCCGACTGATCACGTGATAC
AAGGGTACTGATGCTTGAAGGCTCCATTGAATCTTGAAGAGAATCTGATG
TTTGGGACTTCAATTGTCCTACTGCAGCTCTGGCGGCTGCCGAGGACGAT
TTGATGATTGAGTTTCGTTCTGATCCTGGTGGTTGAGGTGGTTTGGCTGA
TGCTTGGCGAGTTTGTTTCTCAGGTTTCTCGCTGGAAACCGAAGATTTCT
CAGAAGCTACCGAAGATTTCTGTGATTTGACCGAGGATGTAGATTTTGCT
GAGTGTTTACGAGTTTGTTGTTGATCATCGACAACGTCGGCTAGATTATG
AACGGCAGATCCTCTTTCCAGTTTATATGTTCCTCCCCAGGCTTGTTTCN
TCGACAACGTCGGCTAGATTGTGAACGGCAGATCCTCTTTCCAGTTTATA
TGTTCCTCCCCAGGCTTGTTTCTTGGAGATGTTGGCGTTGTTAGTGGTGA
CTAAAGATCTGGTGGATGAATTCAATGCTTCACGCTCCTCTCTTTCTT Run BLAST on NCBI transcript from alignment at scaffold_352:9930..10744+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060991 ID=TCONS_00060991|Name=TCONS_00060991|organism=Clytia hemisphaerica|type=transcript|length=815bp|location=Sequence derived from alignment at scaffold_352:9930..10744+ (Clytia hemisphaerica)
CCGAAAACACACCAGTAAGATCTTTAAGGTGTGATCGAATATCATCCAAA
CTCATAATCGCCAATTGCTCAGAAGTGTATACAGATGTACTGATAACATN
ATCGAATATCATCCAAACTCATAATCGCCAATTGCTCAGAAGTGTATATA
GATGTATTGATAACATTTTGGTCCCATTTGAGCGTTGGAAACTTATCGAA
AAGTCGATTCTCAGCTATGGGGCTTACGGTAAGGTCTGATGGATGGTAAA
GATGATCTAGAACGTTGACGTCAGGACCTCCAAGGTATGGAATGATATCC
GACTGATCACGTGATACAAGGGTACTGATGCTTGAAGGCTCCATTGAATC
TTGAAGAGAATCTGATGTTTGGGACTTCAATTGTCCTACTGCAGCTCTGG
CGGCTGCCGAGGACGATTTGATGATTGAGTTTCGTTCTGATCCTGGTGGT
TGAGGTGGTTTGGCTGATGCTTGGCGAGTTTGTTTCTCAGGTTTCTCGCT
GGAAACCGAAGATTTCTCAGAAGCTACCGAAGATTTCTGTGATTTGACCG
AGGATGTAGATTTTGCTGAGTGTTTACGAGTTTGTTGTTGATCATCGACA
ACGTCGGCTAGATTATGAACGGCAGATCCTCTTTCCAGTTTATATGTTCC
TCCCCAGGCTTGTTTCNTCGACAACGTCGGCTAGATTGTGAACGGCAGAT
CCTCTTTCCAGTTTATATGTTCCTCCCCAGGCTTGTTTCTTGGAGATGTT
GGCGTTGTTAGTGGTGACTAAAGATCTGGTGGATGAATTCAATGCTTCAC
GCTCCTCTCTTTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060991-exon-scaffold_352-1491911889:9930..10026 | TCONS_00060991-exon-scaffold_352-1491911889:9930..10026 | Clytia hemisphaerica | exon |
| TCONS_00060991-exon-scaffold_352-1510915933:9930..10026 | TCONS_00060991-exon-scaffold_352-1510915933:9930..10026 | Clytia hemisphaerica | exon |
| TCONS_00060991-exon-scaffold_352-1575043694:9930..10026 | TCONS_00060991-exon-scaffold_352-1575043694:9930..10026 | Clytia hemisphaerica | exon |
| TCONS_00060991-exon-scaffold_352-1491911889:10094..10744 | TCONS_00060991-exon-scaffold_352-1491911889:10094..10744 | Clytia hemisphaerica | exon |
| TCONS_00060991-exon-scaffold_352-1510915933:10094..10744 | TCONS_00060991-exon-scaffold_352-1510915933:10094..10744 | Clytia hemisphaerica | exon |
| TCONS_00060991-exon-scaffold_352-1575043694:10094..10744 | TCONS_00060991-exon-scaffold_352-1575043694:10094..10744 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_352 | supercontig | scaffold_352:9930..10744 + |
Blast
The following BLAST results are available for this feature:
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