TCONS_00060996 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060996
Unique NameTCONS_00060996
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2634

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060996 ID=TCONS_00060996|Name=TCONS_00060996|organism=Clytia hemisphaerica|type=transcript|length=2634bp
CTACGCCCTACACATCACAACACCCTGCCCCTTCTCACCTTCTCTATCTT
ATCCTTTTTCGCGGTTTAGAGACTGGGGCTAGGCTTGTCATGTGATACTT
TTCTCGGAAcgtcaacaaaaacaaacaggaCGGCTGCAAAAGCGAAAGGT
CTTTCTGATCGCATGACTCTCGTTCGTTGGGAAAACTCCAAACatcaaaa
tactttttcatctttttcttgCAAAGTAGACGTTTAAAGAATGGCATCTT
CATCAGATCACCACATGGGTCAAGAAACAATGAAGGTCTCTCGCAAACTT
CATGGAATGAATAGGGACAGATTGGTAACAGAATTGAGGAACGATGAAAA
CACAAAGAGTGGAATAGTTGTTATACAAGGAGGCGAATCTGAAACACTTC
ATTCAAGTGACAGAGAGGTCGCATTTCGACAGgAATCATACTTTCACTGG
GCATTTGGATGTCGAGAGCCAGACTGTTATGGTGCAATTGAAGTTGATAC
AGGAAGATGCATTTTATTTGTTCCTGAACTTCCTCAAGAATATATTGTTT
GGATGGGACAAATCCATCcaaaagaacattttcagaaGCTCTATGAAGTA
GATGAAGTTTATTTTACAAACGAGATTGCCAAAGTTCTTGAAGATAAAAA
ACCGAAAACACTATTAACATTGAGAGGGCGAAATACAGACAGTGGTAAAT
ATACGAAAGAAGCTGCATTTGATGGTATCAGCAACTTCACAGTGAACAAT
GAAATTCTTTTCCCTGTAATGTCGGAATGtcGTGTATTCAAAACTGAATA
TGAGTTAGACGTCATCAGATATGCAAATAAAATCAGCAGTGAAGCACATA
AAGAGGTGATGAAACATATTCGACCGGGAATGACTGAATACCAACTAGAA
agTTTATTCCAACATTATTGTTATGTTCGCGGAGGATGTCGATTTCTGGC
ATATACCTGTGTCTGTGGAAGTGGTACAAACTCGGCAACATTGCATTATG
GACATGCAGGTGCGCCTAATGATAAACTGATTCAAGACGGTGATATGTGt
ttATTTGATATGGGAGGTGAATATTACTGTTACACCTCAGACATCACTTG
TTCTTTCCCAGCAAATGGAAAGTTTACAGAACAGCAGAAGGGAATTTATA
ATGCGGTTTTGAAATCGAGTCGAGCTGTTTTGAACAGCGTAAAACCAGGG
GTCAGTTGGAAAGAAATGCACTTACTTGCCGACAAAACAAACTTGGAAGA
GATGAAGAAACTTGGAATCGTCCAAGGAGATGTCGATGAAATGATGAAAG
TTCGTTTAGGTGCTGTCTTCATGCCTCATGGCTTGGGACATTTTATGGGC
TGTGATGTCCATGATGTTCATGGATACCCTGATGGCGACAAAGAACACAG
ACCAAAGGAAGAAGGATTAAAAAGTTTACGAACAACACGTACTTTACAAC
AAAGCATGGTTCTCACCATCGAACCTGGAATTTACTTTATTGAACAGTGG
ATTCGACGTGCACTTGCCAACCCAGCTCAAGCTTGTTTCATTGTACAAAA
TGTCGTGGAGCAATACTTTAATTTCGGTGGGGTGAGAATCGAAGACGACA
TAGCGGTGACAGAGGAAGGGTGTGAACTGATGACCAATGTTCCCAGGACT
GTCGAAGAAATTGAATCACTCATGGCTGAAGGACGCCAATCCAACGTCAA
AGTTATGTTTTAAGTCTGTTTGATGATAAATATCTTAAACTTCACGTGCG
CCGAAAACACCGACCATCATAATCAAGCAAATTCGACGTTCCTGGATCAG
TGATAACTGTTGAAATGCGGTTTATTTGACTTAAAACTGGTTAGATATAA
GGTACTTTCTCTGGGTTAAGCTGGAGTCAAAGCTACCAAGAAAAAAAAGG
ATAGCTTTCTATAAACTCAATGTGTTTTTCAGATCTGGATCGTGGATGGT
TGTAATTACCTGTTTTTTTTAGACTAAATAAtgagtttaaagtagttttg
ctGGATAATTATTTGAACTATTGGTACGGAATATTCCTTATCTAGAAATC
ATATTTCCATACTTCCACACATGGGGGTGTTTCTTCCGATGGATGTGCAT
TTTGAATAATTCATGTTGTATGTGTAGCATAGGGTTTTAGGGTGTGTTAG
ACAATTGAATAAGGCCGACACCCTTTCTTTTTGGTTAAGTCTATTGTTGT
TTCATTAAAACTGTAAAGAACGACAAAACAAAAACTTCGTCCTAATAAAA
AGGAACCTAAAAACATTTTGTATTGCTTGCGgctttttttaaacaagaaT
AACTCTAAAAGGAAATAGGGTGTGTTTTTGTTTTGGCTTTCTTCTTCTTG
AGGTTTTACCACTTCCAGTTTTGTAATGTTTGCAGGAATAAAATTCACGG
AATTATTGNactgtatgtactactgatgaactaaactcaaaaactaaaac
tttaccataaatttacattacgacaatttaaaaatctatctttaatagca
acaaagaaataaacatggctcaaagttttaaaagcagagctagtcagagc
ttcaattcagtaggtatagagctttcaaaatttgaaaacagacactgcat
tggttactacaagacatactatccacacggtttt
Run BLAST on NCBI

transcript from alignment at scaffold_352:98608..111457+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060996 ID=TCONS_00060996|Name=TCONS_00060996|organism=Clytia hemisphaerica|type=transcript|length=12850bp|location=Sequence derived from alignment at scaffold_352:98608..111457+ (Clytia hemisphaerica)
CTACGCCCTACACATCACAACACCCTGCCCCTTCTCACCTTCTCTATCTT
ATCCTTTTTCGCGGTTTAGAGACTGGGGCTAGGCTTGTCATGTGATACTT
TTCTCGGAAcgtcaacaaaaacaaacaggaCGGCTGCAAAAGCGAAAGGT
CTTTCTGATCGCATGACTCTCGTTCGTTGGGAAAACTCCAAACatcaaaa
tactttttcatctttttcttgCAAAGTAGACGTTTAAAGAATGGCATCTT
CATCAGAgtaagaatatttctttttgtgcTGGAAATAAGTTTCTCCTATA
TCATATGCCTAAATATCATATTACAGGACAGTAAAAATGCCCTAAAATTT
TTGGTTTCAGATAGCGCCCAGATAgatggtgtcaatcgaacaacttcgaa
caaaaatcgcaatcgaaccaatcgaatgtaatcaaacgcgatcgaataat
tgcgattcaaTTGTCAAACGTTATcgaatcctgggtaatattcgattgtg
tttgattgcgttcgagtaatgttcgattgatagttgactatgtttgattg
gttcgattgattgtcaataacattggattaatgttcgataaattacgatt
atgttcgatgagtttgattgtgattaaattaaattggatcactctggtGT
TAGAgcttttagcgtgggcggccgagtgcttaagtaacataccaaagcga
ataaaatctaatacaattaaATCAagcgaacgtaatcgaatacaatcgaa
cgtaatcgaatacgaTCGAacgtaatagacctttttttaaagaggcagcc
atgttgaataattatgtactccagcataaaaagaatgatacagccatgca
tagtttttaaaatatgcatgatacagtataTAATTATAATTAACCTTTTT
TCAGATTTCGCTGATTGCTCAGAGCGCGACGAGCAATTTTTTTTCCCAat
aatttttcctatccgtcattccgtgattcagggggtattgggtcatTAGT
AGGGTCaaggttgctagtaacggcttgtcactgtgccgggtgcatactct
gCACCTTGGGCCCTGCAGGGTTACGAAAATGTACGTAATGTATTATGTGA
TAATTCAATAGAactgctagtaacggctcgaatttcagtcaggtttaaaa
aaggggtacttttacccattgtaataacattacccccgtcttttgccagt
tcgatTTGTCGatatccgtcttctaatttcgacatccttctttatagatt
ggaataataagaaggtcgaaatcactgatagactaaagattttttcctct
catcgcgctaatcaaagtcaatcagcgattccgaccttcctcagtttcta
ttgttcctatctctaaagaagggtgtcaaaattagaagaccAATTTAcgg
taattatgcatggttttatcattgtttttctgctgggcTACatattattc
aacagggtggcctctttgaaaaaaggtctattccgacaccctttttatca
gctgaaattgatagaaaggttgaaactgtttttgtttgcttagtggtcag
agaggaataatccttttttaaTCAGCGGTTTAAGTTTTCATAtcattcct
gtctctaaagaccaagttacggtagctgttttgtccagcacaagtgtttc
aaccggtattccaacgaagccatattttggttttgtacagaaattttgcc
tgttcaaatcaaaacaacaaaatggtcaaactcactaaagcaaaacattg
gcgccacggcatttccctggataaaaattctggtcacgtgaccatccgtg
attttagaccaatgaaagcGCTTCATTTCCCcagattaaagttgtgtcta
cactaacacgcagTAACTAGCCAACACGCtaatactatttgtatctctca
gaaaataaacatttacagaacaacattgtttatcatttggaatacccccg
tatttggaccattctatcgtgggcgcaaaatagggcggaaactaagtagc
accctcagtgcaagattggcgcctcatctttattcgcccgcgcgagaaca
cgagctaatcatttttttcttgcgcGCTTgagggaaaaggaaagtgaacg
atattctttgaaggaaaaacatcagaaacaaacccaaagatcAAAAGacg
tattttgttgttgagaatcgatcctgtgaagatgaaaacaTTTCTGCTAT
GCgcttttttcggaacgctgaaaaactctaatttcaatcttccttaaggt
aaagaggttgcaagatttgggttagcgaggcaaaaatcgctaaaaagctg
gtaaaatcgtaatcctcaaaaatcaaagttccagcctcactgtttTGGCT
TTACCACCCTCAGAGCAGTAGGCACCTCTGTCANCAGCCTCACTGTTTTG
GCTTTACCACCCTCAAAGCAGTAGGCACCTCTGTCATTccgcaactctgt
ccaccattCTAAATGGCttgttaacaatagatccaaatgATCCTTTGAGG
CAAAATCAATTtcaggaaaagctggaaaatcATAGAAacttccaaaaatt
gaaaatgcatGAGAAATCAAATTGTTCAAAAGTTGTCTCTACTCTAAATC
AtcataattaaaattttttgatgctTCTATCATGTAGTCACCACATGGGT
CAAGAAACAATGAAGGTCTCTCGCAAACTTCATGGAATGAATAGGGACAG
ATTGGTAACAGAATTGAGGAACGATGAAAACACAAAGAGTGGAATAGTTG
TTATACAAGGAGGCGAATCTGAAACACTTCATTCAAGTGACAGAGAGGTC
GCATTTCGACAGGTAAATATatttatattaaatatataGATTTATTTAAG
CCATTTTCACTAACAAAGTATTCATTCAACTTCGCATTCCCATGCAAATG
GTTCTagcaaagtgtttttttttttacatacaaGTTGAAAAGTTATAACT
TAGAATTAGAATTTCTACAGTTTGACAGTTCAAAGCTAACAAAATGATAT
CATGTAAAGCTATATAGTTAAAATTTCTTGACACTTTGACAGGGTATACT
GTTTTGCTTTTCCAGAATAGAGCTACTACCAGTATCATATtccaatcaat
ttttttcattcaaggAATCATACTTTCACTGGGCATTTGGATGTCGAGAG
CCAGACTGTTATGGTGCAATTGAAGTTGATACAGGAAGATGCATTTTATT
TGTTCCTGAACTTCCTCAAGAATATATTGTTTGGATGGGACAGTATGAGA
TTTTGTTTCTATCATCTTTTTATATATAGCACTTAAAATAATGGTGGGAC
ATGggcattgtccgacccaaatagctCCTTGTCCAACCCTAgaattataa
tttttataattttctctAATCAGACATTTTTTGCGATCActtattttttt
aagcttatgagtTATTCCAAGCCATCTTTATATTAATGAGCATAGAATTT
CTAATAGACAGACTATTTGGATTAAGAAAAAGTATGATATAATATACATT
ATTGAATCTGAAAATCTAGTTCCACTGTTTGTTTTCTAGAATCCATCcaa
aagaacattttcagaaGCTCTATGAAGTAGATGAAGTTTATTTTACAAAC
GAGGTAtgcctttcaattttttgagaaaCAAGACAATCTTTCATCGGATA
GATTCTTCTGGAGAACCGTAAATCGAGACCAGAAAAAAACCTTTTATACG
CTTTCTACATGAATGAAATAATGACATCATTTTGATAAATCATTGCCTTG
TCTTTAGATTGCCAAAGTTCTTGAAGATAAAAAACCGAAAACACTATTAA
CATTGGTAAGAAAAATTGATCTCAGTTAAATCAACTCCCAAAGATCTCCA
AAAATCTTCATTGATTCACTATTCAAAATATGATCTGTTAACTACACCAA
GAATGGATTAAAGGATTTCTTGTGGGAAATTACTCCAAAATCAAAGCATT
TGCTAAGATTCTTATAAGTGATTACTAGaaaattgtatttatttttgaaa
attacttaCCATTGAGGTCATTTTTGGGTAaattccatacaggggggtgg
acgaaccttttcaagtcaaaacaaaTTACTTGGAAATGTGTGAATACCCC
Ttgtaaaatggcaaaatttgcaaaaaagaccctggaaaaaattattttca
tgtcttgaagtgagggtggacgaactaatattttaccccctggaagttCA
AGAATAGCTTTTTACCCcttgaaagaatgacaaaacaCTTCTTTAGACTT
TCTGGAAATTCGTTTCAGATTACCCCCGGAAAAATTTCgaccaccccctg
tatggatataaaatggaatggcccattttggcTTTTGTAGCAAGTACATT
CACTGAGTTGATAAGTTAAAACTTCTGAACAAAATACTGTCTTTGTTGTT
TGAAAGAGATAGGAAAcacataaatataaaaacataattGAAATACTCAA
AATATTTGTCTTAATGTAATTTCACAGAGAGGGCGAAATACAGACAGTGG
TAAATATACGAAAGAAGCTGCATTTGATGGTATCAGCAAGTATGACacat
ttttagacttatttTGCTGGAAACTAAACAAGACACTCTTTAGGACTTTT
TTCGCCCAAAAATGGATTACTTTTCGTAAAAGTTTTAAGAAAGGTGCATC
AGGATTCAAAATTTGACAAATCTATTTCTCTTTTGTTAGtacttactctt
gtctcccgaatagacgtcccccttgctaattgttaagagaaaaaaatcca
tccccccgctcttattaagacccccctcCTGctaatcaaattcaaaaaat
tcaatattttattactgtgtagatagaccttaaaaaaacttgttaaaatt
tttctttttttagtattggttcttattttacgtgttcatttgttaaagtt
ttttgttgttgttgaaattgatatcagttaaaaaaattctgtcttcaaat
taccccctccctcttattccatccccctgCTTAtaagaatttagaaaaat
ttcctaccccctgcttatttgggcccccgtctattcgggagacaagagta
cctACTTTGTGAAGTCAATTAacttcttttgttgtttttatgtaATTCTG
TGTTAAGAAATTTGGTCGttgatctttatttttctagcaaataaaacttt
taaactttcttttttagCTTCACAGTGAACAATGAAATTCTTTTCCCTGT
AATGTCGGAATGGTAAGATTTTTTCCTGGTTAAACATGAATTCCGGTTAG
ATATTCTAGCTTATAATTTTTCCACTGCGTCTCTTCTTATAACCTTTTAA
ATCTaagtcaaaaataatcatttttgaaaactataaaATCACGCAAAAAT
GAGGTAATAAATTTCATGAATAAGAAAAAGGTTCTGTACAGTCTACAGTC
GTGGTAAGATATTGGGAAACATAGCGTACTTATTTTCTTGGAATAATGAT
ACAATCGTAAAAATACCTTTTAGGGAAAAACTTATTTGGGTAAAATTTAG
TCACACAGGTAAAATTTAAGCCAGGAAAGATTTCGTCACTTTTGTGAATG
TCTTGGCCACGACTCATTTGAAGTTGACTAGAAAGGTTGCCGTGGAAAAC
TTCGTCACTTGTGTAAGCACTTTATAGAAACccttataatttttatttca
ttttagtcGTGTATTCAAAACTGAATATGAGTTAGACGTCATCAGATATG
CAAATAAAATCAGCAGTGAAGCACATAAAGAGGTTAGAGATGacgttttt
tcatttctttttgtttatttctataGAAAAACCTATCGATCTAATTTAAA
AGGCCTAACAACACTTACTGTGTCTTTTTCCAATAACAAGCTATTTTTCG
AATCTTCAATGGAAATGTTTTGTTAAACCTTCAAAGGACAATgtattttt
tggatgtttttaatcTCTGTGACCTCATTTCATCAGGTGATGAAACATAT
TCGACCGGGAATGACTGAATACCAACTAGAAaggtaaaattcaaaatttt
tgaagcctttagatgttcttgacttttttagttttaagcctaaaaatgtt
cttaacatgttcttgttttcgccattttttgagcatttttgtcatttttc
ttaagaaatcaggttctttagagtccgcgaagtcttaaaatgttcttaat
atgttcttaacattttagccatcaaagcctcatgttcttatatagtttgt
tcttataaaaaaatgtgtatactAATTCCCTTGAGAGCGGGTTTCACATG
GCGGCAAAGTAGAGTGCACAGTAAAATCAAATGAACTTTAGCTCTCTTGA
TCTAGATGTTTTTAGTAATTGAATCTGTTTTGAAAAACAGCTCCCGAAAT
AAAGATGGGGTTCTTTGGAACTCTTAACTGTACATCTTGAAATATAAGTC
ATCTCATTTTATACGGAGGATCAGTCAATCTATTAAATATGTATTTCATG
AACGTAAGTGGTTTTGAAACTTCACCGAGCAATACTAGagtataaaaaaa
aagaagaaatagtctagcaagctagacgactaattcagacatagtagaca
TAAAGCAagaagtaatggagggaacaagttaaatcccgtaacaataatcg
tattatcatataaacGACCCCATTCTACTTGTAAAAAAGTTTATCCTCCA
AATTTGCTTTTCAGTTTGTTTCAACATTACTGTTATGCAAGAGGAGGGTG
TCGATTTGTTTCCTACACTTGTATTTGTGGAAGGTATGTCATTCGAgttc
attttcatatttttttacaGTTTATTCCAACATTATTGTTATGTTCGCGG
AGGATGTCGATTTCTGGCATATACCTGTGTCTGTGGAAGGTatcttttaa
agggacataaaagtactgacgaaatttgtaaacaaaccgcatgcagcggg
atacaaaatcaaaacaaatgtcacatgtcaaaataaaaaacaaaacaaac
atggctgattttgattgtttcaattgttttgcgagtttgttttggacacg
tgattttaattgttctcttttaTGACACGttgttcgcgcaatgtttacat
tttactacttttatgtccctttaaactttgtgatttttttttaagttttc
agCTTTTTGACGATCTAACTTTTAACTCTTTTGGGATAAAATAGATTTGT
TGATTTGAAGTTCCTACTTTCCACCTatttatcaaagaaaaaacattgag
TGACTTGCACTGGCACTCTTGAACCTACACTGAAAGAATCACGGAAATCA
TAAAAgataataacaaaaataatagTTCTTAATTCAAAACTTTGCTCATA
TAAGATTTTGAAATTGCAATGAAAGACTAAAAGCAGATCAGGTGCACTTA
TCGGTACCCAAGGTAACATTCTATACCAGTGAAATCTGGTCAGTAAATTG
AATAAAAGCATTCTTAGTTAACATTTTTTACCAGCGTTTTTACTGGTAAA
ATGCTACATTGGGTACCCATAGGTGCATCTGATCCTTAAAAGCATTATCT
ACATAATTTCCCAGACCTTAAGCAACTTTCTGTGCAATATTTGATACAGT
CAAGAAGCTTGATATCGACGAGTGAAGCTTTTACAAAGTAGGCATCTTGG
CCTGCTTGGCTATGTTCAAATGGTACAAGTACTTAACtttgtttctttct
ttatcCTTTAAGTGGTACAAACTCGGCAACATTGCATTATGGACATGCAG
GTGCGCCTAATGATAAACTGATTCAAGACGGTGATATGTGGTGAGTTTTT
GCCCCATGTTTACATCTAAACCTTACCATTAGTAAGGTTTCTGGACACAT
CATTTAAATCAAagtctttcgaaaaaaaaaataattatggtATTCTGTAG
GTTTGCAAAATTACAGCCTCCTTTATCTACTTCTCTTCAGCCTTGGTAGT
ATTTTATTGAGGACTGAAATTTGTAGATTTAATGATTTTTCGACACTGTA
GTACCCTTTTATGCTGGAAGAACATACCCATTTACCCATTGCTATACGTT
TTCCCAGGCAAACCCTTAGGTTTAAGGCAGTTTTTAAGCTTTAAATTAAA
GATAAAGTGGCTGTAGCTTGGGGAAAGAGCATCCAGCTACAGTACACAAC
CACAGATATCTGTAAAGCccgaagggctagatttgcggccttggtcaaaa
agtgaagctcatctttggaaggatttcctaccagagtcacgtgactaaaa
tatgcaatttcaccggtatgagagatgcgaaatagcgtttgccgcctacg
ttttttgatctcgcgctccgaaaacaattaaaatgctagatcctatccat
cggcacgaaatttaaaaagtcaaatttttgcttcacttttttttgctgga
gaaagcttaaagttgcctatctagcccttcgggcttagatatctgtgtaC
ACAACACAACCTtgtgcaccgtagctggatgccaGCCAGGTCATACCAAA
GGTAACAAAATGGTAATTGATATCTCTCTGCTTGTTGgacagcaactaaa
gagacggatcaaagGTAATGGAGAAATTCAGGGAAAGGaatggcgccctc
ccctaccttcaggtagaaacttagagaaaagggagccttcagGTTGCGTC
CGACTGTGGTCGCAGACTGACTTATTTTAGTCTTAAACCtattattgaaa
ataaagagggaaagtataatttttatattttgttttcatattttcagttt
ATTTGATATGGGAGGTGAATATTACTGTTACACCTCAGACATCACTTGTT
CTTTCCCAGCAAATGGAAAGTTTACAGAACAGCAGAAGGGAATTTATAAT
GCGGTTTTGAAATCGAGTCGAGCTGTTTTGAACAGCGTAAAACCAGGTAA
TAACTCTCTTCCTAAGTTAAACTGTTTGGCTCTTATAATCAAAGAGCAAA
TGTGATTTAAATGAAGGGAGGGTTTAGCTATAGGGATATAATATGATACA
CTAGAGTCTTCATAaatcgaacctctataattcgaatatctccttaactc
gaaaaagtgaTCCCTTCAGTTACCagtctccgtaactcgaaatttccaaa
attcaaacaaattcgTTTTCCCCATGCtcgtttgagttatggagacgcCA
CTGTATATGAACATAATATGGAATAGGCTAGCAGAGTTAAgaccctaaaa
tagcttttaataTACCCAGGGTCGTTGTTGTTGgatgatttttgaagatt
ttttgcaTGTGCAAGTCATGATACGGTCAATTGATGTTTTGTAACATTAA
AGTGTATTAAAAGTGTATTAAGAATCTCTTTGGCTATAGaggtcccgggg
ggggggggggtactaggttttgCGAGGTTTGCtaataattgaaaaaatat
atcataTGTCTGAGCGAAATTTCTAAAATCGATCCTTTGAGAACTGAATT
TCGATGTTTATGCCTCTCTTTGAGaaactattttttcaatttgtaGCTCA
AAATAACCAgattttatgaccctttgagggagtcgatttttgatatttca
taattttggaccctttcagagacttaattgctcgcacatacccgacatCC
CCCCCCGGGTAGAGGTTTTTCAGGTTGACAAAGTTACGTAGTTACCATTA
TGgaagaaaacattgattttttCGCAAGGAGTTGTCTCtacaaattcgaa
aaatgttacacgtttttttaagaacatccaaattttttgaagccttcgga
tgttcttaactttttgagttttaagccatgttttatgttcttatttttgt
cattttgtgagtattttagtccaatttcctaagaaattggtcgtttagag
tccgcaaaaccttaaaatgttctaagttgttcttaatattttggccatca
aagtctaatgttcttatatagtttgttcttgtaaaaaaaatgtgttattT
TTCTAAGGGGTCAGTTGGAAAGAAATGCACTTACTTGCCGACAAAACAAA
CTTGGAAGAGATGAAGAAACTTGGAATCGTCCAAGGAGATGTCGATGAAA
TGATGAAAGTTCGTTTAGGTGCTGTCTTCATGCCTCATGGCTTGGGACAT
TTTATGGGCTGTGATGTCCATGATGTTCATGGATACCCTGATGTAAGTTT
TCTATAGAAAAGGTTGTTAAAATTGTTTGAGATATCAAGACAAAATAAAG
GGTAACGGTCTGTCTTCATGCCTCATGGTTTGGGTCATTTTATGGGCTAC
GATGTCCATGATGTTCATGGATACCCCGATGTAAGTTTCCTATagaaaaa
actgttaaaatagtTTGGGATATCGAGACAAAATAAAGAATTAAATTCTG
TTTGAGAATTGTTGCTCTGTATCAAAGTTCAGGTTATTTTATGGGCTGTG
TTAACCACGATGTTCATGGTTACCCTGATGTAAGTTTCCTATAGAAAAGT
CTGCTAAAATTGTTAGGGATATTGAGACAAAACAAAGGATAGTAGTATGT
TTGGAAATTTCGTCACGGTTTGGGTCATTTTACGGGCTGGGATATCCGTG
ATGTTCATGGGTACCATGATGTAACTTTCCTATAGAAGAGACTGTTAAGA
TATATCAAGACAAATCAAAGAATGAGAGTCTGTTTGAGAATTTTGCTCTG
CATCACGGTTTTGATTATTTGATGGGGTGTTGAGTAATACAACTCTAAAT
CAATTAAAGCATTATGCTGCTCTGGGCTACTTTAGATAAtgtttcacctt
tcaaagttttCTTCTTGGCTTAGATTTTAAGCATAGATTTCCAGAAGTAT
CGTCAGTCATGTGGTGATATCTCGATAATTATTCACAGAATATTTGATTT
ATCCACCACAGGGCGACAAAGAACACAGACCAAAGGAAGAAGGATTAAAA
AGTTTACGAACAACACGTACTTTACAACAAAGCATGGTTCTCACCATCGA
ACCTGGAATTTACTTTATTGAACAGGTACAATGGAATTCTAGTGTAAAAA
AGCTCTTATCAACTCGAAAGGATTGTATGTACGAAGGCTGTCAACATCCC
TCTAATGCGTTTTGttataaaatctttttcaagaATAAACACAGCCTAGG
TTTACGAACGTAAATTTCGTTAACCTCCAATAATTTACTGtgcaatttaa
aaaatcttggccaaaagttttataaaaacattggCCTCgactaaaaaaaa
acttaaaaagctAATTTTGAAAACACTTCCAGCTTTTCAAAGTAGTTTAG
TCAACATAGGTCTATtgtgagaacattttaagaaaatgttAGCCTGCATT
TATAGCCTATTATTATACAAATCAATaactaaaattgttcttcttctttt
tccagTGGATTCGACGTGCACTTGCCAACCCAGCTCAAGCTTGTTTCATT
GTACAAAATGTCGTGGAGCAATACTTTAATTTCGGTGGGGTAAGGATCAT
TTCGTTCATTGATATCGGGGGGTATAGTCTGGTCCGGTCAATTTGTAATT
TAAGCTAGTTGCTTAAGTTTGTACTTCTATATTATGTGTGGTTTCAGTTC
AACCTCAAATTAAGTCGAATCAGGATgcgaaagtttttgaaattcacCTG
GCTAGACACAACCCTAAGAggattcattttcaaattttcatttttgtgaa
atttatcctggtgaaaatttaaaatcaggattttttgccaaaactcGTAT
GAGAATTAAAGAAATTAggtgaaaaagaggctgattcgcaaaattttgtC
AACGCGAAAAGTTTAGTTCTTCGATTCGCGAAAAAAGGTTCGTGCGAAAA
TCTATTCACTTAGATAAAACAATTACCTTACTATATCTCATTAACAGGTG
AGAATCGAAGACGACATAGCGGTGACAGAGGAAGGGTGTGAACTGATGAC
CAATGTTCCCAGGACTGTCGAAGAAATTGAATCACTCATGGCTGAAGGAC
GCCAATCCAACGTCAAAGTTATGTTTTAAGTCTGTTTGATGATAAATATC
TTAAACTTCACGTGCGCCGAAAACACCGACCATCATAATCAAGCAAATTC
GACGTTCCTGGATCAGTGATAACTGTTGAAATGCGGTTTATTTGACTTAA
AACTGGTTAGATATAAGGTACTTTCTCTGGGTTAAGCTGGAGTCAAAGCT
ACCAAGAAAAAAAAGGATAGCTTTCTATAAACTCAATGTGTTTTTCAGAT
CTGGATCGTGGATGGTTGTAATTACCTGTTTTTTTTAGACTAAATAAtga
gtttaaagtagttttgctGGATAATTATTTGAACTATTGGTACGGAATAT
TCCTTATCTAGAAATCATATTTCCATACTTCCACACATGGGGGTGTTTCT
TCCGATGGATGTGCATTTTGAATAATTCATGTTGTATGTGTAGCATAGGG
TTTTAGGGTGTGTTAGACAATTGAATAAGGCCGACACCCTTTCTTTTTGG
TTAAGTCTATTGTTGTTTCATTAAAACTGTAAAGAACGACAAAACAAAAA
CTTCGTCCTAATAAAAAGGAACCTAAAAACATTTTGTATTGCTTGCGgct
ttttttaaacaagaaTAACTCTAAAAGGAAATAGGGTGTGTTTTTGTTTT
GGCTTTCTTCTTCTTGAGGTTTTACCACTTCCAGTTTTGTAATGTTTGCA
GGAATAAAATTCACGGAATTATTGNactgtatgtactactgatgaactaa
actcaaaaactaaaactttaccataaatttacattacgacaatttaaaaa
tctatctttaatagcaacaaagaaataaacatggctcaaagttttaaaag
cagagctagtcagagcttcaattcagtaggtatagagctttcaaaatttg
aaaacagacactgcattggttactacaagacatactatccacacggtttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038294XLOC_038294Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060996-exon-scaffold_352-1491911889:98608..98864TCONS_00060996-exon-scaffold_352-1491911889:98608..98864Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:98608..98864TCONS_00060996-exon-scaffold_352-1510915933:98608..98864Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:98608..98864TCONS_00060996-exon-scaffold_352-1575043694:98608..98864Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:101245..101419TCONS_00060996-exon-scaffold_352-1491911889:101245..101419Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:101245..101419TCONS_00060996-exon-scaffold_352-1510915933:101245..101419Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:101245..101419TCONS_00060996-exon-scaffold_352-1575043694:101245..101419Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:101722..101849TCONS_00060996-exon-scaffold_352-1491911889:101722..101849Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:101722..101849TCONS_00060996-exon-scaffold_352-1510915933:101722..101849Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:101722..101849TCONS_00060996-exon-scaffold_352-1575043694:101722..101849Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:102147..102210TCONS_00060996-exon-scaffold_352-1491911889:102147..102210Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:102147..102210TCONS_00060996-exon-scaffold_352-1510915933:102147..102210Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:102147..102210TCONS_00060996-exon-scaffold_352-1575043694:102147..102210Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:102365..102412TCONS_00060996-exon-scaffold_352-1491911889:102365..102412Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:102365..102412TCONS_00060996-exon-scaffold_352-1510915933:102365..102412Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:102365..102412TCONS_00060996-exon-scaffold_352-1575043694:102365..102412Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:103085..103146TCONS_00060996-exon-scaffold_352-1491911889:103085..103146Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:103085..103146TCONS_00060996-exon-scaffold_352-1510915933:103085..103146Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:103085..103146TCONS_00060996-exon-scaffold_352-1575043694:103085..103146Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:103775..103819TCONS_00060996-exon-scaffold_352-1491911889:103775..103819Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:103775..103819TCONS_00060996-exon-scaffold_352-1510915933:103775..103819Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:103775..103819TCONS_00060996-exon-scaffold_352-1575043694:103775..103819Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:104264..104339TCONS_00060996-exon-scaffold_352-1491911889:104264..104339Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:104264..104339TCONS_00060996-exon-scaffold_352-1510915933:104264..104339Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:104264..104339TCONS_00060996-exon-scaffold_352-1575043694:104264..104339Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:104544..104590TCONS_00060996-exon-scaffold_352-1491911889:104544..104590Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:104544..104590TCONS_00060996-exon-scaffold_352-1510915933:104544..104590Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:104544..104590TCONS_00060996-exon-scaffold_352-1575043694:104544..104590Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:105378..105446TCONS_00060996-exon-scaffold_352-1491911889:105378..105446Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:105378..105446TCONS_00060996-exon-scaffold_352-1510915933:105378..105446Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:105378..105446TCONS_00060996-exon-scaffold_352-1575043694:105378..105446Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:106270..106347TCONS_00060996-exon-scaffold_352-1491911889:106270..106347Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:106270..106347TCONS_00060996-exon-scaffold_352-1510915933:106270..106347Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:106270..106347TCONS_00060996-exon-scaffold_352-1575043694:106270..106347Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:107305..107453TCONS_00060996-exon-scaffold_352-1491911889:107305..107453Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:107305..107453TCONS_00060996-exon-scaffold_352-1510915933:107305..107453Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:107305..107453TCONS_00060996-exon-scaffold_352-1575043694:107305..107453Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:108515..108699TCONS_00060996-exon-scaffold_352-1491911889:108515..108699Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:108515..108699TCONS_00060996-exon-scaffold_352-1510915933:108515..108699Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:108515..108699TCONS_00060996-exon-scaffold_352-1575043694:108515..108699Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:109419..109532TCONS_00060996-exon-scaffold_352-1491911889:109419..109532Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:109419..109532TCONS_00060996-exon-scaffold_352-1510915933:109419..109532Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:109419..109532TCONS_00060996-exon-scaffold_352-1575043694:109419..109532Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:109913..109996TCONS_00060996-exon-scaffold_352-1491911889:109913..109996Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:109913..109996TCONS_00060996-exon-scaffold_352-1510915933:109913..109996Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:109913..109996TCONS_00060996-exon-scaffold_352-1575043694:109913..109996Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1491911889:110405..111457TCONS_00060996-exon-scaffold_352-1491911889:110405..111457Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1510915933:110405..111457TCONS_00060996-exon-scaffold_352-1510915933:110405..111457Clytia hemisphaericaexon
TCONS_00060996-exon-scaffold_352-1575043694:110405..111457TCONS_00060996-exon-scaffold_352-1575043694:110405..111457Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_352supercontigscaffold_352:98608..111457 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.623018	1.13882	0.745006	1.10698	0.83146	0.650734	0.403465	0.455518	1.78934	2.8566	2.20577	1.86462	3.13266	2.0664	1.44255	2.2809	1.34298	1.12331	0.893597	1.42969	1.80127	2.46197	1.69212	0.832027	1.51991	1.57814	1.04819	0.701084	2.06934	1.6277
Blast
[Close]
BLAST of TCONS_00060996 vs. Swiss-Prot (Human)
Match: PEPD (Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 SV=3)

HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0
Identity = 295/479 (61.59%), Postives = 365/479 (76.20%), Query Frame = 1 
Query:  244 ASSSDHHMGQETMKVSRKLHGMNRDRLVTELRNDENTKSG-IVVIQGGESETLHSSDREVAFRQESYFHWAFGCREPDCYGAIEVDTGRCILFVPELPQEYIVWMGQIHPKEHFQKLYEVDEVYFTNEIAKVLEDKKPKTLLTLRGRNTDSGKYTKEAAFDGISNFTVNNEILFPVMSECRVFKTEYELDVIRYANKISSEAHKEVMKHIRPGMTEYQLESLFQHYCYVRGGCRFLAYTCVCGSGTNSATLHYGHAGAPNDKLIQDGDMCLFDMGGEYYCYTSDITCSFPANGKFTEQQKGIYNAVLKSSRAVLNSVKPGVSWKEMHLLADKTNLEEMKKLGIVQGDVDEMMKVRLGAVFMPHGLGHFMGCDVHDVHGYPDGDKEHRPKEEGLKSLRTTRTLQQSMVLTIEPGIYFIEQWIRRALANPAQACFIVQNVVEQYFNFGGVRIEDDIAVTEEGCELMTNVPRTVEEIESLMA 1677
            A+     +G ET+KV   L  +NR RL   LR +   ++G IVV+QGGE    + +D  V FRQES+FHWAFG  EP CYG I+VDTG+  LFVP LP  +  WMG+IH KEHF++ Y VD+V + +EIA VL  +KP  LLTLRG NTDSG   +EA+FDGIS F VNN IL P + ECRVFKT+ EL+V+RY NKISSEAH+EVMK ++ GM EY+LESLF+HYCY RGG R  +YTC+CGSG NSA LHYGHAGAPND+ IQ+GDMCLFDMGGEYYC+ SDITCSFPANGKFT  QK +Y AVL+SSRAV+ ++KPGV W +MH LAD+ +LEE+  +GI+ G VD M++  LGAVFMPHGLGHF+G DVHDV GYP+G +  R  E GL+SLRT R LQ  MVLT+EPGIYFI+  +  ALA+PA+A F+ + V++++  FGGVRIE+D+ VT+ G EL+T VPRTVEEIE+ MA
Sbjct:    4 ATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVE--RIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMA 480
The following BLAST results are available for this feature:
BLAST of TCONS_00060996 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PEPD0.000e+061.59Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 S... [more]
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