TCONS_00061024 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061024
Unique NameTCONS_00061024
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061024 ID=TCONS_00061024|Name=TCONS_00061024|organism=Clytia hemisphaerica|type=transcript|length=155bp
aaacgtacatgtacgtttattaggcacccgagagtatatCCATACAGAAG
GGTAAACGAACTTTTCCCTGGGGCAACCTGGGGTTTAAGGAAAGTCAAGG
GGCTAAAAGTTATCTTAAAACCCGTGCACACTCACTTAAAAGGTATGAAG
AACTT
Run BLAST on NCBI

transcript from alignment at scaffold_352:199831..199985

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061024 ID=TCONS_00061024|Name=TCONS_00061024|organism=Clytia hemisphaerica|type=transcript|length=155bp|location=Sequence derived from alignment at scaffold_352:199831..199985 (Clytia hemisphaerica)
AAGTTCTTCATACCTTTTAAGTGAGTGTGCACGGGTTTTAAGATAACTTT
TAGCCCCTTGACTTTCCTTAAACCCCAGGTTGCCCCAGGGAAAAGTTCGT
TTACCCTTCTGTATGGatatactctcgggtgcctaataaacgtacatgta
cgttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038308XLOC_038308Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061024-exon-scaffold_352-1491911889:199831..199985TCONS_00061024-exon-scaffold_352-1491911889:199831..199985Clytia hemisphaericaexon
TCONS_00061024-exon-scaffold_352-1510915933:199831..199985TCONS_00061024-exon-scaffold_352-1510915933:199831..199985Clytia hemisphaericaexon
TCONS_00061024-exon-scaffold_352-1575043694:199831..199985TCONS_00061024-exon-scaffold_352-1575043694:199831..199985Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_352supercontigscaffold_352:199831..199985 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061024 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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