TCONS_00061200 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061200
Unique NameTCONS_00061200
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length924

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061200 ID=TCONS_00061200|Name=TCONS_00061200|organism=Clytia hemisphaerica|type=transcript|length=924bp
gaaaagtattaaAATACAATATGCCAAGGTGtacttttgttctttttgtt
tttcaggtaacaaataaaaataacaaaccatttcaagaaaacaaataTAT
CAAATTATGTCTTCAAAAACCAAATTGTTGTTGCTGAGTTGTGGAAGCTT
TAATCCTATCACACACATGCATCTAAGGATATTTGagCTAGCAAGAGATA
CGTTGCACAAGACTGGTTTGTTTGAAGTGGTTGGTGGAATCATGTCTCCT
ACACACGATGCTTACAAAAAAGCTGGGTTGATTGAATCAAAACATCGAAC
TGCAATGTGTCAACTGGGAACAAAATCTTCGGATTGGATCAGAGTTAGCT
TATGGGAATCGGAGCAGGCTGCTTGGAGTACCACAATAACTGTTTTGAAG
CATATCCAGGAGAATGCGAAACAAAAAACACAACCAAATTATACAACCCT
TCCAGATAATGTACGCGTGCGACTTTTATGTGGTGCAGATTTGATGGAAT
CATTCAGTGTGCCTGGCTTGTGGAAAGACGAAGATATTAAATGCATTGTT
GGTGAATTCGGCCTTGTTGTTATTACAAGAGAAGGATGCAATCCAGAACA
ATACATCGAAAAGCATCATATCCTTCAGCAATTCAAGgACAATATCACGC
TGGTTGAGGAATGGATCCCTAACGAAATCAGCGCAACCAAAATAAGATAT
GCGCTAAATCAAAACGAAAGCATCAAATATTTGGTTCCAGATCCCGTTAT
TAATTACATTAAGGAGCATGGGTTGTATTCAAATTAAACAGATGTATTCA
ACAAATCACACAAACAAATGAAGCCCTtcatttcgaattattttaatGCA
ACTTATTATGAATAAACATGCGAATTTGGGGTCTTTTGTATTTGGGGTAA
TTTGTCTTGTACAATGACGCCCCC
Run BLAST on NCBI

transcript from alignment at scaffold_354:818875..832728-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061200 ID=TCONS_00061200|Name=TCONS_00061200|organism=Clytia hemisphaerica|type=transcript|length=13854bp|location=Sequence derived from alignment at scaffold_354:818875..832728- (Clytia hemisphaerica)
GAAAAGTATTAAAATACAATATGCCAAGGTGTACTTTTGTTCTTTTTGTT
TTTCAGGTAACAAATAAAAATAACAAACCATTTCAAGAAAACAAATATAT
CAAATTATGTCTTCAAAAACCAAATTGTTGTTGCTGAGTTGTGGAAGCTT
TAATCCTATCACACACATGCATCTAAGGATATTTGGTAACGAGGCGCAAT
TTTAAATTTCATTGTTTAAATAAGCCCTTAATTTTCTATTTTACACTGTA
ATATGGACCAAATTGTATTTGGCTTGAAAAGGAAATTTTCTTTTTTAATG
AAAAGCATTCAAATTTTAAGAATCCTTTTTGAACTTTGAACTGTAAATGA
TAAATAGAGTTTTGACTTCCCACTCCTTTGTTTTCATACCGAAAATCTAA
AACACTGGGTCAATGAGACAGGAGTGCTGCTTCTACGCTTTAAATGAAAA
TAAATTTTAATCTTGAAAATGTTGTTAAGAGAAAGCCTTATAGGCTTTGG
AAATTAACTCCTAAGCATTTAAATCTCAACAAATTGTTTCTCATTTTTGT
TTATTTCAGAGCTAGCAAGAGATACGTTGCACAAGACTGGTTTGTTTGAA
GTGGTTGGTGGAATCATGTCTCCTACACACGATGCTTACAAAAAAGCTGT
ACGTTTGTCCATCGCTGGATTTTGCTTAAAATGTTCATGTTTTGATATTA
TTTAAAAGTTACACCCTTTTTTTATAAGAATATTTCAAATTTTTGAAGCC
TTCCCGATGTTAACTTTTAGTTTTAAGCCTAACGAAAATGTTCTTAACTA
TATTCTTAATATTTTGGCTATCGAAGCCTTATGTTCTTATATAATTTGTA
CTTGTAAAATGAATGTGTAAATGATAAGCTTGAAATTGTATTTTTTATAC
CTTTGGGTTTCCTTATAAACTTTTATTACACTTTCANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGCGTCATACCAAAACAAACCCCGATTGTTTCTTATCGGAAATT
TCACGCTGATTCCGATTTTTTAATCGGTTTTACCGTACCTCTGACGGTTG
GGGCGTAATCCGATCAAATATAAAGGTCACCTTAAAAAACGTATATATAC
GTCCTTAGGAACGTATCAAAGACGTATATGTACGTCCTTAGGAGCGAAAA
GGTTAAGAGAAAGCCTTATAGGCTTTGGAAATTAACTCCTAAGCATTTAA
ATCTCAACAAATTGTTTCTCATTTTTGTTTATTTCAGAGCTAGCAAGAGA
TACGTTGCACAAGACTGGTTTGTTTGAAGTGGTTGGTGGAATCATGTCTC
CTACACACGATGCTTACAAAAAAGCTGTACGTTTGTCCTGGATTTTGCTT
AAAATGTTCATGTTTTGATATTATTTAAAAGTTAAACCCTTTTTTTATAA
GAATATTTCAAATTTTTGAAGCCTTCCCGATGTTAACTTTTAGTTTTAAG
CCTAACGAAAATGTTCTTAACTATATTCTTAATATTTTGGCTATCGAAGC
CTTATGTTCTTATATAATTTGTACTTGTAAAATGAATGTGTAAATGATAA
GCTTGAAATTGTATTTTTTATACCTTTGGGTTTCCTTATAAACTTTTATT
ACACTTTCATGGATAATTCTATTTCAGGGGTTGATTGAATCAAAACATCG
AACTGCAATGTGTCAACTGGGAACAAAATCTTCGGATTGGATCAGGTGAG
ATACGACTTTGACTTGCTTGTACTGTGCTTTACACCTTTATAACTGTGAT
GTGGGCACCTAACTTTTTGATGGAAAATTTGAGACTGGACTTTAAAAAGA
TGATTTACCAACAACATCAGTAATTTGTGGTGACAAAGTGCTCTATACCA
AGGTAGAGCTAAATTCAAAATTTATTTTTCTTTAAAAAATTAAAAACATA
GCAGGCTGTTTCACGCCTTCAGAAAGTAATTAACAGGCTATAAAAGTGAT
TAAAAGTGATAAAAGTTGGGTTAATTGATGATAATAATAATAATAATAAT
AATAATAATAATAATAATAATAATAATAATATGAAAATCAAATTCAGCAT
TCAAGACGAACAATCGCGAATCCAAATCCTAGAAACCTTGAAACAACGTT
TGATGGCGCTCAACAACCGTCTAAAACGATTCATCAAACGTGAAAAGCAA
TACCACCACAACAACACGTTTGAAAATGACTTATATTAACCGTGCAAGCA
CATGGGCCTCTATAAATCGCTCATACATTGGTTTGGTTTATTACAAAGGT
TAACTTCAAACAGATATGCAACAATAGTGACAATTTCAATCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTGATGATTTACCGTCACCTCGAAACCGGCTGAGAATTT
TAAATGAAAGCCTTAATCGTGTCTGTTTCGTTATTTCTTATGCTTAAAAA
ATATGTATTCCCTTCTAGCTCGTCCGTTTTCATTTCAAAATTAATTACCC
AAGTGTAAACAGAACTTTTTATAAATGGCAAAAATATAACAAAAATACTG
ACTGACCGCCCGACCCACCTCCAATATGGCTGACAATAAAATAACATCCT
AACCCTGGATTCTAGAATCTATTACTCTCGGGTACCTAATAGCCGGGGGA
ATTGGAATAAGCGGGGGGGGGGGGGGTTGGAAAAAATTTAAAAAAAAAAA
AAACCCCCCACCGTTGTTTTTATAACTTTTGTTGCCGGGGGGTAAAGGGG
GGGGGGGGGGGTTGTTGGAAAAAATCTCAAAACTGAATAAGCCCCCCGCT
GGAATAAAAATGTCTTGGGTGGAAAATTTTTGAAAAGGAGGCTGATACAG
CTGCAATTGGACAAAAGAGGGGACTTTCAAAAACATTTTCCCAAAAATTA
ATAAGCGGAGGGTATTAGGTACCCGAGAGTACCTATTTAGGAGTGGAAAA
AAATGGACAATCACTTTAAATTTGTACTTTTATTTGTTTTAGCTTTGCAT
TTTGAAAAGAAAATTGAGACCAGCTTTGTATTTATTAGTTTTGTATTTTG
AAAGGAAAATAACATTAGCTTTGAGTAGAAAAAAATTTGCACTAATATTT
TGGAGAGACAGTTTATGTTAGCTTTGAACTTTGGGAGGAAAATGAATAGT
TGCGTTGTATAAGTTTGAAAGGGAGCTTTGCATCTCTGGGAAAGATAACT
ATTCGTATAAGCTTGACATTTTGAAAGAAAAATTTCTTGTAAGTTTAGAT
GGAATTTGCACTACTAGGTTTGTACTTTAAAACGGCAAAATTTCTTTTTG
ATTTGTATTCTGGAAAGAAAATTTGTACTATAAATGTGCTGTGATTTTTC
GGGAGAAAATTAACACAAGCTTTGTATTTTTGACGGACATTTGAATCAAC
TTTAGTTTGGAAGAAGATTTGAATAAAAATTTTTATCTTAAAGGGTGTGT
CAAGAAATCGGCCTATATATAATTGAGACTTTGACCATAGCGTTCTAAAT
CTAGCACGCCATGACTTTGACGTATATATTTTCTCGTCATGCTACGCTCT
TCCAACTTTGCATGTTAAACAGTACTTTTTAAAGAAAATTTCAGTCTGAG
TCTAATTTCGATTTCGATCAAGCAACCATAAAAAACATTTTACATCGAGC
CCCCTACAACTTTTTAAAAATTAAAGTTGATTTCACTCAAAGGGCCACAA
ATAACTTGTTAAATTCATTTACTTTTTAGAGTTAGCTTATGGGAATCGGA
GCAGGCTGCTTGGAGTACCACAATAACTGTTTTGAAGCATATCCAGGAGA
ATGCGAAACAAAAAACACAACCAAATTATACAACCCTTCCAGATAATGGT
TTGTAGTTTTGAACTTTGCTGTAAAGTCGGGTGGGGGAACGGGTCACCAA
GTTTAAGTTATTGTCAAAAGTTCTTTCGTCTTTCGATTTCCGTCTCAGTG
AAGTACAGTATAGTCTTTTATCAAACAACTTTAACTCGAATGCCTCCTCA
ACACGAACAGTTTTTCTTGTCCATTCAGTTAAAAATGCTTTATAACCTTA
CTCCATAACTCGAACACGCAGGGGGGAACAAGAATTTGTTCGAATTATAG
AGTAAGGTTATAAGCGTTTGGAACAAACCTTGTAAACACCTCCGCCACTA
CTCACTCCCCCCGGGCTTACCACTATTTTCAAATTTATCCCACCTCCTAA
ACTATTCCTTTTTTTAGTGATCTTGTGTGGACGATAGGATCGGCTATGGA
AACTCAACTGCATATAAAAAGCCTCCAAGAATTTGTTTTAATTTCCGTCT
CATAAATTGACATGTCTTTGGATAAGATTTCTTTCGGCTACCGTAGATCT
GACTGGTAGCCTAATACAAACAATTCAAATTTCTGAATATTGCAAAGAGC
TTTCTTACCAAATACTTTTTTTTATATTTTGAATAAAATTTGAGATTTTA
CATCAACAACATCGCTACTTCTTTCAGTACGCGTGCGACTTTTATGTGGT
GCAGATTTGATGGAATCATTCAGTGTGCCTGGCTTGTGGAAAGACGAAGA
TGTGAGTTGCTATTTTTAGTTTATTTGGTTTTCCAAGGATTAACTGAATT
TGGCTATTTTGCGGTTTTAGGCCTCCAAAATCGTTTTTCGCGGTTTTTCG
GCCTCGACTGGGAAACCGCGAAATTTTCATGGCGCGAAATTTTTATGCAA
TAAAGTAAATTCGCCGAAACAAACGGCCACTTAAATTAAAAATCGGCCAT
CCACGAAATTGAATACCCGCCATCGGCCTTTCGGCCAACCTCTAAATTAG
TTACACACCACCAAAAAAACTATTATACTAAAGGCATTATCAACTATCAT
TTCTGACTTATGAAGAAGTATTTGTATTCCTAATTAAAGAAATTCACGTG
CCATGTTACTTCATTGTCGTGAAAACAAAGAAAGTTCTCGATTTAATTCG
ACGCCTAAATGCGGCAAAGAAAGAAAGGTACATTTGGGAAGATTCCACTC
TAGCCCTTAGGGATTTAAAGTCGATAGTCAAACGTATGTACTTTTATGAT
AGGTCTTAAGGGTTGGTTTCAGGATAGATGACGGAGAGCAATTTGCCCGT
TTTTCGTCCGGGCCGGTGGAATTTTCGATAAAATAGTTAATGATTCCGAA
ATTTTCGATAGATAATTCGAATTATTTAGAGATTTGGAGGAAAAAGCTCA
TGCAATTTTCGATTTATTTGTGATTTCTATGTAATCGTTTCTTTCTCTAG
TAGATTAAATGCATTGTTGGTGAATTCGGCCTTGTTGTTATTACAAGAGA
AGGATGCAATCCAGAACAATACATCGAAAAGCATCATATCCTTCAGCAAT
TCAAGGTATGTTTTGTGTTTTTGGCTTTTTTATGACCTTACTTAAGGCCG
GTCTCCACTTGCGCGCGCTGCGATCGCACTTTTTGGCTTCAATAAAAGTT
TAGCGCGCCCTTGTAAAAAACGTTGAACACATTTCAACTTTTTTTAACCG
TTACGTCAGATCGCGCCAATGGATTTGCTTCATTTTTCTTTTGACCAATA
GTGTGGAAGCTTTGCTCGAAAAAAGTGCGATCGAAGCGCGCGCACGGCCT
TTATATACTTTTACGCCAGCAAATACCCTGGTGTTGGCTTATTCGAGTAC
CATCTCCTTCAATAGGGGTACCTTCATTTAAGAATATGTCATCGAAAATC
TGACCTTAATAAGATAGATATATGCCCTCCGAATTATTCGAGATGGGTCT
TAAAGTCCCAAAGGAATAAGATTCACAGCGATGACAGACACTGCGAGTTG
ACAGACGCGAGCTGCCATGACGTATACCATGACACTCGAACGACACTTGG
AGAGCGATGCTCACGCGAGACCGAACTTAACGAGTACCACGGCACGTCCC
AATGCCAGTCTAATCTACTCTTGTATCAGAGTAGTGGTACCCAATTCCTC
TCACATGGTATGGGTTGACGCGGGTGAAGGTATATTCACTTGCCAAGCAA
ATCGTAGTTACACTGTGGGTATTGAACTCGCACCTCCCAGGCGGGATTCA
AGGATGATAACCACTATACCACACTGACTTTACTAAGATGAACTGCAATT
TAATGGTTTCAAAATCTTAAAATAATTTAGTAATAATTAGTCTGGTAGCA
AGGTTGCTAAGGTTGATTTTGCGTTGAAATGTACGGGGTCGACAAAAGGC
TCCTAGTCGCTAGTCACTATGCTCCTTTTTCACACCCCTAAATCAGTTTG
AGCTAGTCAGGTTCTTTAGACACTTTTTTGGATAAAAAATTGGTTTGAAA
AGCTACTGTCCAGCTACTTTTCTGCACTTGCGAAATTGTGAAAAGCTTCC
GCTGCCACTTTGAAGCGTTCCTTTTCTAATTTATTTGACGTAGGGATAGA
GTCGACTTTTTTATTTTGGGGTTTTATCGAAATAGAATCTTTTAAAAATA
TATTAGATATGAGACTATTATAAAATTTGGAGAAATAAACTATAGACAAA
CAAAAATAATAAACTGACAATAAATATATAAATACTCGTATAAATAGATA
TATAGTTAAATAAAAGCAAATCAGATTCTTGAAAAACTCTCAGAAATACT
CGGACAAAAAACTGTCCTGTTCTGGAGTCCGTACGGGACTCACAGTACGC
GAACCCCGAAAACACACATGAATGGATTTTATCAGCGAAAAGTTTATCTT
TCTTGTTATCCAAGACATTGTCTCGGAGTATGAAGAATGTCTCTTTTCCG
AAATCATAGAGGCAAGCCGTCGAATAGCTTTGACGCATTCTCGACCGTGA
CCACCAGTCGCAGAAAATACCATTGGTGTTAGCGAGCCATGTTCAATTTC
GATCACTCTGTTGTTGTAGTGACGTTTCTTTTCGTTTTCGTTTATCATGT
AGCAGCGTTGTGGTTCGAGGGAGACATACCTTTTAGCGAGTGGATTAAAA
TCCCTTATATCAAAGAATGCTTTTTGGCCTGTCACCCAAAAACCTCTTGC
TGAAACATCTAATCGAGCTTCGTCTGATTTTACCGACGACTTCGGGAGGT
TTTCGATTCCCACCAACGATTGGAGGGATGGCTCGATCTGCACGTCATGG
CAAACTTCTTTCAACATTTTTGTGAAGAAATTTCTCAACTTGTTGTGGCG
GAGAGAGATAAAACCCCCTTTTTTTACACGAGAGAGCGTGGTCTAACGAA
AATGACACACCACACTCGCAGTTTGATGGTGTTCGATTGAGCTGCCAGCC
ATAACGGATGCGAATGAGGTCTTGGAAGCATTGTTTAGAGAGATTGTAAC
CTTCGCTCTCCAATGGTAGCGTTGACAACCAAGATGAAGCTCCGTGTTCT
TGGTTTAACAAGAGCAATGACTTCTGTTTTTCGTTTAGAAGAGCATCAAG
AAGTTGCAATGATTCGTTGATTTTGCCAATCTTTTGTTTGCGAATTGCGA
GTTTGCGAGTTTATTGCGTCACTAAGATGAGACGTGATTTGTCGAGAGTT
GGCGTACTCGATGGCACATTGTTCTTCGAATATCGGGATAGCGAGTCCAC
CATACTTGGTAGGTAAAGATACTTTAATCGTAGAAATTTTAGCGAGACTA
ATTTTAGCGTTTTAGCGAGTTTTCCCTATTTTCGCTAAAATAAATCTCGC
TAAAACACACCGAAACGACAGATCGCTAAAATTTATCCATGCGAAATTTC
TGGTTATATTGCTTTGATACATTTTTATCAATAGGAAGGGTTTCAGTGCA
AAGAAATGCTAGAAAACTAATTTAGTCAATAATGTAATACGAGTATTCGC
TAAAATTTATCCACGCGAAATTTTTTGAAATCATGATTCGCTAAAATAAA
TACAAAAAAAATCAAGATTTTTCTGGCTCGCTAATATACGCTAAAATTAG
TCTCGCTAAAATTTCTACGATTAAAGTATCAGTTTTCTCTCTACCTCATT
GAGATGGATTCCACCGGTGATTGATGGGATGAACTGGTGAAGAATGATCT
GATCGATTCTTCTCAGGTGGATGGAGATGTCTGGTATTGTCCTCATGATG
AAGGTTAGCTTGTGACGAAACCCGGAGGTAAAGCCAACATACGCAGCTTG
CGGTTCGATTTTGCCAATCTCTGCGAGGAGAAGTAGCTCTTTACAGAGGC
TGTCGACTTTTTCTGCGACATATTCGTCTCGGAAGGTTGTTGAACCGATG
ACTGCACCGAGGTGGCGTTTCCCCTTCTGTCGTGATGTTGATTTGTGTTG
ACGAGAAGGCTTGTTTAGCGACCGTTAGCTGTTTCTGCCATTTTCAAAAT
TATTGATGATGATTCGTTACCAAAGTAACGATATAAGAAAACCCCTTGAT
ATAACTTTCTGGAAACCCCCAATTTTCTTATAAAAAGAAAACAAACTTCG
CGAGAAGGCTATGAAAAAGAATTTCTCTCTTTTCCAACTAACCCCCGTCT
TGAAAAGCATTTTCATTTCATCTTTATTACACAATATCTTTTCTTCTTTC
TTTCTTTTTCTTCTTTTTTTTTTTCATTCGCACAGATGTCATCTTTTCAT
TAATTTTTGTCAATCAAAAGGTCAAATATTGGCTTTCTATGATTTCCAAA
AAAAAATCCCTTTTCTTCCTTTCTTTCTCATTGATTCTCTTCCAATGAAT
CTTCTTTGAATGCAAAAGAAAAATCTGCTACCGTTCGAATTTTCCCCATT
CATCATACCTGCCCCCTTTCATGATTTCCAGTGATTTTCATTTTCCCCTC
TTTTTCTTTATCGAGAGGTTATAAAAAGGAGAAAATATCAGAGACTTCCC
GCAACAATGACGTCATCAAGTACTGATAAATACTGATAATCGCTTCCCAT
TTCTCTCGTTGAGTCCTCAGAATTTCAGGACTATGAATTCGTCATTTTAT
CTGCCTCATTTCCATGAGATGTAATGTCTTGTTTTATTCCAAGTCGTTTT
AGCTCGTCTTTGCATGCCTACATGTCAACAATTCTAGAAACACCCCTTCC
CCAGAAAAATCCTCTCCATAAACTTGCCCCTTCCCCAGGAAAACTGCCCC
TTCCATTAAGTTTGACATTCTACACCAATGTCCAATTTTATTTACTATTT
GATAAATTATAATACATCGGTCAAATCTTTACACAACTCGATATTTTTAA
AACTGAATCGGGAACAAACAGGGTCTTAACGAGTTGGAAATTTCGAAAAT
GTTAAAGTCATTACTTAAGAGTCCTACTGAGCACCCCCCCCCCCAAAGAG
CTCAGGAATGAGCATTACTGGGGCCTTGCCATTAAAAAGCTATTGAGAAC
TGCCCTGTAGAATTTCAACTTGTTAGATTGTCTTTCAGCTTGTCCAGTTT
TGGCAAAATGTTAAGTAATTCTAGCCTAGTTAACTAAGCCCGTATTCACA
AGGCTAGGACACACGGCTTATGGCAATATAGCGTTTTCGGCGCTTTAAAG
ATTTATTATATTTACGGATTTTAAGTTTGCCTTGGAATACTGTTATGCAG
TCACAGCTTAACCATCAGATTTATCCAAGTGACTGAATCAAACTAGCTTA
GATTTCTAGGCTAAAGTAATTCCACCGTGGCTAAAAGACTTTCACCATCA
CGTTTACATTTTTATGAATTTCTTTTTTCATAGGACAATATCACGCTGGT
TGAGGAATGGATCCCTAACGAAATCAGCGCAACCAAAATAAGGTAACAAA
CTTTCTTTAAACAGCTCTTTAAAGGCAGGCACTAAAAACACTCGTCCCCA
CTTGGGCAACTCATAAAAGGCTGGTATTTCGAATTCTCGGGCAGCCTTCT
TTCTCGCCGATGGCGTCAGGTTAAGAAATGGCATTGAACAATCGAACGAT
AATTTGCATCTTTTTATTCACAATTATAAGTGAAAAATAGTACACCCTTC
ATAATTAATTGGTTAAGTTTACACAAGGAACTTGCAAAGTTGATTTTTTA
TGTTTGTGTACGAAAGATAATTCGTAAGAAAATGTTCTCCTTGAAATGGA
ACTGTTCGTATCCCTAAATGACTCTTTATTTAAGCACCATCGAGGCCAGT
GTCTGTTAGGGTTGACTTGGGAGCTGATGTTGACTTATCACACCCCCTTC
TCACTGACCTACTGGGACCCCTCCCCACTGGAAAAGTTGGCTTAACTAGA
AAAGTGGAAAATTATACTCTAATTTTTGTCCCCACTGAATTTTCTGACTC
GAAAGCAATGGAATTCAAATCCACAGCCATGAAAAGATTTTTAATCTTAA
CAGGTCTATGAGAAGGTTGTAAGTCTGACGTAAAATCAGTCAATACATCA
TTTGCAACCAATCAGCTTTCGGGTCCGTGGAAGACATTGCAATGGTGCAT
ATCATGAATAGCCCTGAACCAATAATAATCGTGACAACACCCGTTGGAAA
GATAAAATTGAGTTTTCTCCTTTTAGATATGCGCTAAATCAAAACGAAAG
CATCAAATATTTGGTTCCAGATCCCGTTATTAATTACATTAAGGAGCATG
GGTTGTATTCAAATTAAACAGATGTATTCAACAAATCACACAAACAAATG
AAGCCCTTCATTTCGAATTATTTTAATGCAACTTATTATGAATAAACATG
CGAATTTGGGGTCTTTTGTATTTGGGGTAATTTGTCTTGTACAATGACGC
CCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038385XLOC_038385Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061200-exon-scaffold_354-1575043694:832544..832728TCONS_00061200-exon-scaffold_354-1575043694:832544..832728Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1575043694:832081..832169TCONS_00061200-exon-scaffold_354-1575043694:832081..832169Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1575043694:830784..830851TCONS_00061200-exon-scaffold_354-1575043694:830784..830851Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1575043694:825681..825799TCONS_00061200-exon-scaffold_354-1575043694:825681..825799Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1575043694:824978..825051TCONS_00061200-exon-scaffold_354-1575043694:824978..825051Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1575043694:824174..824275TCONS_00061200-exon-scaffold_354-1575043694:824174..824275Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1575043694:819837..819895TCONS_00061200-exon-scaffold_354-1575043694:819837..819895Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1575043694:818875..819102TCONS_00061200-exon-scaffold_354-1575043694:818875..819102Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:832544..832728TCONS_00061200-exon-scaffold_354-1510915933:832544..832728Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:832081..832169TCONS_00061200-exon-scaffold_354-1510915933:832081..832169Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:830784..830851TCONS_00061200-exon-scaffold_354-1510915933:830784..830851Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:825681..825799TCONS_00061200-exon-scaffold_354-1510915933:825681..825799Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:824978..825051TCONS_00061200-exon-scaffold_354-1510915933:824978..825051Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:824174..824275TCONS_00061200-exon-scaffold_354-1510915933:824174..824275Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:819837..819895TCONS_00061200-exon-scaffold_354-1510915933:819837..819895Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1510915933:818875..819102TCONS_00061200-exon-scaffold_354-1510915933:818875..819102Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:832544..832728TCONS_00061200-exon-scaffold_354-1491911889:832544..832728Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:832081..832169TCONS_00061200-exon-scaffold_354-1491911889:832081..832169Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:830784..830851TCONS_00061200-exon-scaffold_354-1491911889:830784..830851Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:825681..825799TCONS_00061200-exon-scaffold_354-1491911889:825681..825799Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:824978..825051TCONS_00061200-exon-scaffold_354-1491911889:824978..825051Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:824174..824275TCONS_00061200-exon-scaffold_354-1491911889:824174..824275Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:819837..819895TCONS_00061200-exon-scaffold_354-1491911889:819837..819895Clytia hemisphaericaexon
TCONS_00061200-exon-scaffold_354-1491911889:818875..819102TCONS_00061200-exon-scaffold_354-1491911889:818875..819102Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:818875..832728 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.1403	21.5153	26.513	26.7229	19.9109	14.5715	9.33253	10.9853	7.81173	8.41118	6.97582	5.69027	3.67706	3.18875	3.94121	4.71777	8.36542	6.40004	0.726282	2.15175	3.88401	3.57426	6.14176	6.84406	4.3058	4.22618	6.70571	4.00565	3.51673	3.33518
Blast
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BLAST of TCONS_00061200 vs. Swiss-Prot (Human)
Match: NMNA3 (Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 OS=Homo sapiens GN=NMNAT3 PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 8.748e-77
Identity = 117/237 (49.37%), Postives = 161/237 (67.93%), Query Frame = 2 
Query:  107 MSSKTKLLLLSCGSFNPITHMHLRIFELARDTLHKTGLFEVVGGIMSPTHDAYKKAGLIESKHRTAMCQLGTKSSDWIRVSLWESEQAAWSTTITVLKHIQENAKQKTQPNYTTLPDNVR-----------VRLLCGADLMESFSVPGLWKDEDIKCIVGEFGLVVITREGCNPEQYIEKHHILQQFKDNITLVEEWIPNEISATKIRYALNQNESIKYLVPDPVINYIKEHGLYSN 784
            M S+  ++LL+CGSFNPIT+MHLR+FE+ARD LH+TG+++V+ GI+SP +D Y K  L  S HR AM +L  ++SDWIRV  WESEQA W  T+ VL+H   ++K    P     PD+ +           ++LLCGAD++++F  P LWKD  I+ IV +FGLV + R G +P+ YI +  IL+  + NI L +E + NEISAT IR AL Q +S+KYL+PD VI YIK+HGLY+ 
Sbjct:    1 MKSRIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWESEQAQWMETVKVLRH--HHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGLVCVGRVGHDPKGYIAESPILRMHQHNIHLAKEPVQNEISATYIRRALGQGQSVKYLIPDAVITYIKDHGLYTK 235
The following BLAST results are available for this feature:
BLAST of TCONS_00061200 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NMNA38.748e-7749.37Nicotinamide/nicotinic acid mononucleotide adenyly... [more]
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