TCONS_00061553 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061553
Unique NameTCONS_00061553
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2364

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061553 ID=TCONS_00061553|Name=TCONS_00061553|organism=Clytia hemisphaerica|type=transcript|length=2364bp
TCCACATTCAGGACAGAAATTTAGTTGGAAACAATATACTTAGTTTTCTC
AAAGACAAGATCAATTAGATACTTAGACATCATCTTTGGATATGCTTGTT
TTTGCTGAAGTTTTGtatataatttaattttttctcacTAGAGTGTATCA
TGTTTCAAAAAGATTGACcaataaatatataaataagatttttatgtttt
gtatgAAGAATCCCTCCTTGTTGAAGGGATTCAGTCATCACCATTTCTTC
AGCTACAGAAGATACACATTTGATCCCACGCAGCCCTTCCACTGGTAGAA
AAGCTCAACTCTGGACAAACGGAACATTCATCAATCCTGAACCGCCAGCT
TCACCATCCTATTACACTCCAAACACAATGACAGTCCTGGATAACGAGGG
TGGGGCGCACCACCCTCAAGCTAATGGCGtcgaaaatttcccacccaTAG
AGAAACTGTCTACAAAACGTATGAGAAGGAAGCAAAGTAAATGGACGTTG
ATCATcacatttttatcttttatttttatcattattttaatCACGGTTGC
TTATTTGGTTTCCAAAGGATTGTTTGTGCATGAAGATGCTGAAAAGGTAC
CCATCGTTAAGAGCTGTCAAGATGACATGACTTGTCGTATAGAAATCGTC
GAAACATTACCTAAAGTCTTATCCTATCCTTCCGGTTCACCTATGCACGC
GAGCACACCAGACGTGTGGAAGAAACTAACGAAAGTCGCGCGTGAAAGGA
TTGATATCTTATCGTTTTATTGGACGCTGAAAAACTTCACTTACGATGAG
GCAGTTGTAGGAGCGGAGATATTGGAAGGATTAAAAGGAGCTGCAAGGAG
AGGCATCAAAGTCAACATTGTGCAAAACGCGCCAACCAAACAATTCCCAA
ACCTGGACACATTTGAATTAGCCAAAGAGGAGAATGTAGAAGTTCGTTCA
ATGAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACACCAAAGTTTGGGT
TGTGGACAAGAGACATATGTATGTTGGAAGTGCAAACTTTGACTGGCGCT
CTCTTACTGAGGTCAAAGAGTTGGGTGCTGCACTTTACAATTGTACATGC
GCGGGTGAAGActtgttcaaaatttttgacgtcaacTGGTTACTTGCACA
AAAAGACTCACAAATCCCGTCACCGTGGCCTGAACAGTACCAAACTACTA
TCAATAAAGATCACCCACAAAACATTAAACTGGTGGATGCACCGCCCTTG
GATTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCGCCTAAACGAAC
GTCTGATATTGACGCCATCATCGACTTGATCTCAAGGGCAGAGAAGTTTG
TTTATATCGCAGTTATGGATTATTATGCAGCTTTTGTTTATCAGAATAAA
AGATTCTGGCCCACCATAGACGATGCTCTTCGAAGTGCATCTTTCGATCG
AGGAATCGAGGTCCGACTATTGACCAGTAAATGGCCTCACACCAATGCAC
AGCAGACAGCTTTCATCAAATCGCTGAACGAATTTGGTAAAATGCCTATG
CCACACACTAGCGGAAGTATTACTGTGAAACAATTCGAGATGCCACCCAA
CGAAATTCCATTTGCACGTGTCAATCACAACAAATACATGGTGACTGATA
AAGGAGGCTTCATTTCTACTTCCAACTGGTCTGGAGATTACTTCGCGACA
ACTGCTGGTGTCAGCCTCATAGTAAATCAAACAGAATCACCACAAAACAA
AAACCAGGACCAGAAAATGCAAGATCAATTAAAAGACCTCTTTATGAGAG
ATTGGAAATCACAATACACGAAGGGCTTATAATCTGGTCTGTGAATTACA
TTTTACGCAAACGTGATAACACAACGATCGTCCAAGTATGCAACTGTACt
ttaaactcgaacccagtcccttagctCGCTTTTGATGATTCACGAAAGGA
TTGTACCActaacctttatatatccctggaccaagtttctcaatcccagc
taagcaaaatctttgatcggagttttttcgaaattggtaccctaatgggc
ggcactactcaatagcggtgaaaatgcatcgagagcgctagatctacttt
tcctcaaatacttttgatgatgtagcgtcGTTAGACGTTAacttttaaca
ttgcaatggcttcttctcgggtaccaattcaaaaaaactccgatcaaaga
tggcgaatatagcttggtccagggataaataaaggtcagtggattgTACC
AATGtcaatcaataaaatcaaaaagttgcgcaagtggctctgggtatgAG
AATGACCTGGATGAATGAACTTGGATTTTCAAATTTGCTtgagtttttat
tttatgattacTTG
Run BLAST on NCBI

protein sequence of TCONS_00061553-protein

>TCONS_00061553-protein ID=TCONS_00061553-protein|Name=TCONS_00061553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=484bp
MTVLDNEGGAHHPQANGVENFPPIEKLSTKRMRRKQSKWTLIITFLSFIF
IIILITVAYLVSKGLFVHEDAEKVPIVKSCQDDMTCRIEIVETLPKVLSY
PSGSPMHASTPDVWKKLTKVARERIDILSFYWTLKNFTYDEAVVGAEILE
GLKGAARRGIKVNIVQNAPTKQFPNLDTFELAKEENVEVRSMKPETLGGG
VLHTKVWVVDKRHMYVGSANFDWRSLTEVKELGAALYNCTCAGEDLFKIF
DVNWLLAQKDSQIPSPWPEQYQTTINKDHPQNIKLVDAPPLDYYWSTSPP
SFCAPKRTSDIDAIIDLISRAEKFVYIAVMDYYAAFVYQNKRFWPTIDDA
LRSASFDRGIEVRLLTSKWPHTNAQQTAFIKSLNEFGKMPMPHTSGSITV
KQFEMPPNEIPFARVNHNKYMVTDKGGFISTSNWSGDYFATTAGVSLIVN
QTESPQNKNQDQKMQDQLKDLFMRDWKSQYTKGL
Run BLAST on NCBI

transcript from alignment at scaffold_36:30664..38475+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061553 ID=TCONS_00061553|Name=TCONS_00061553|organism=Clytia hemisphaerica|type=transcript|length=7812bp|location=Sequence derived from alignment at scaffold_36:30664..38475+ (Clytia hemisphaerica)
TCCACATTCAGGACAGAAATTTAGTTGGAAACAATATACTTAGTTTTCTC AAAGACAAGATCAATTAGATACTTAGACATCATCTTTGGATATGCTTGTT TTTGCTGAAGTTTTGtatataatttaattttttctcacTAGAGTGTATCA TGTTTCAAAAAGATTGACcaataaatatataaataagatttttatgtttt gtatgAAGAATCCCTCCTTGTTGAAGGGATTCAGTCATCACCATTTCTTC AGCTACAGAAGATACACATTTGATCCCACGCAGCCCTTCCACTGGTAGAA AGtaagcaatttttttatttttgtagtaCTGTATGCTATCTTTTGTCCTA CCTATGATCCTATACAACAGGGTTTCTATCTTCTTATTCCATAGTACCAA ATAGTACTATCATAAAGTgatgttttgtttatttatcttatgtcaggggg ggtcagggtccagCTCGTAGAAAAATAAGcagtctttttttatttttgta gtatgcaatttttggacctacctggaggtcctataaattaacctgtgttc gttcgtttgtccgttcgtccatccgttcgtttgtctgttaccaacttttc tcaggattgaatcataggaatcttttgatttttggtacaaaggtgaaaaa tggtggtggccataatgtgacggagcctgattttaagcaaatttcagcca aaaaaatggctaaaaaagggtttttaagaCTTGTGAAAAATTGGTAATCA TTAATAATAGCGCTTCGTCGTGCAAACGTCATGGTAGtacttctctcatt tgaccgaaattcaatcccacaatccttttcgtcttaattataaagtcgtg aaagttattacttttcctttgtaattgagtgtaatttgcgtgcaagcata ataaacgcaaagggtgatgggattgaatttcagtcaaacataaaaaatca atgtctatttttagattcgcgacggtatgctattggtaaaagatggctga agcagattttcacaaaaaaattttttcggctcaaaaaacgaATCTTCATC TATAAGAATTGCCTTTTTTTAGCATATTAtcgatgttcttagccatatta ttatttttattagtttttttaagatgaaaatgtcacaaTGGAGGGCAATG GTTTGAGTGTTCTAGAAATATTATTATttctttggctgaaaaacgacaCA GTGATTTGTTgaatttatcattttcacaTTTTCGTCATGAATTTCAAAGT TATACTCTATTTTCTTACAATGTTTattctgttagaaaaaataaacattt agtTTTCATGGCATTTGACAGTAAGGATATGGTCATAAACATTTATCCAG GGGGGACAAATTGAAATTTGTAGGAGTAAATCATTAGAACAGTCATACAA CCTGCACACCCGTCTACCTTTGTTTTTCTGAAACGGAAGAGTACAGGCTT TTTTTACTATAAGAatgtgtaaatccatttcatcatggatatttttaact tttttgggaaaatcgtcctaaaatattcttaacatattcttaaggttgat ttttagattttaccaGTCATAGTCTCAAAATCATAGAAAAGTATTGTAAA AACATGTGTATGCATAAAAAACAGAATAAGTACAATGTATTTTAAAAACA GCTTTGTGTAAAAGTACAAAGtaaatgaaatagaaaattatAAAAGCAGA aatatattcataaaaaaatagaaaattttcatGATGGGAATATTATTTTC ACGATAATTTTCATCgtgaacattcttataaagcgTATTCTTGTATAAAA AAAGCGTATACTGTTCAATCAAGTAAACATAACAACATATCCAAACTATA ACGGAAAAATAACACTTTAAAACCAAACAAGGCTCATGTTTCAAAAAGAA CGTTTTTAAAATGTAAGGCAAATGGACAAGTTCCCATAGCAATATTCATG TATCCGATTTCTGTTTTAATTAGGATAGTGTGCCCTTTCATGTTTTGTCT TGTGACAAGCGTCCTAACGTCTAGAAGGTCTACTTTAGTAGTCTTGATGC ACGCGAGCTTTCCTTTTTGTGAAAGACACTGTACGTGAGCAGACGTGTAA CTATTTTAGTttacatctttttttttaagtttacttttttttatctctct AAAAAGCACACATTAAAGGTCTGTTTCCTTTATTCAGATTGGAATTTCTC AAACATTTTTTGGCAGGCTTTTAAGATTGCGCTTTTAGAGAAAGAGGGCT TTTTACTGTGTTttgatgattattttttaaactaCAAATGAAGTTAGTTT GCAAGTCAGGATTTATTTTTCCAAAACCAAtttaatacagttgacgctgc cctaattcgattttcaatggaattcgattttcatcaaataagggagcgta ttgaATGGTAAATAAAGCGTCGTTTGTGAAAGTTTCTtcttgacggtgac tttcaatattatcgaataatgaagCTTATTGAATAATAcaatgtcgaatt agagagcgtcaactgttacatattcaatattcgacgttaaaaaatagttt gttttCCACCGCTTCGTTTTTTTAATATTCATTTCAAAACTTACCACTAA CTTATATATCATTCTTGTTTCAGAGCTCAACTCTGGACAAACGGAACATT CATCAATCCTGAACCGCCAGCTTCACCATCCTATTACACTCCAAACACAA TGACAGTCCTGGATAACGAGGGTGGGGCGCACCACCCTCAAGCTAATGGC GtcgaaaatttcccacccaTAGAGAAACTGTCTACAAAACGTATGAGAAG GAAGCAAAGTAAATGGACGTTGATCATcacatttttatcttttattttta tcattattttaatCACGGTTGCTTATTTGGTTTCCAAAGGATTGTTTGTG CATGAAGATGCTGAAAAGGTaaatacgtttttttattagaaactGAAAGC CTTTATTTGGACTGAGCCTCGATGTGTTTATTGTTGACAGTAttaagctt aaaaaaatgttcttatcgggcgtttttgaaatttattcgCTTAAATTACT TTGAGTTAAAGAATGGTTTGGAgccttttaaatgtttttaaaattttttt cacctttcttagtttgttcttaatattttggccatcgaagtctcGTGTTT TTATATACATATCATTTTAGTGGgcatttaatttggcggatgaaagatat ttttagtccaaaacacTATTAAATgagaaaaacctgtttttaggcctaaa ataGCACGCATTTGGGGAACGAATACAATAATCTAAATTTGGCGGTGTCA AATTAAatgttcccgccaaaatttcgtTCTTTATAAGGTAATTTCTATTT TCGATTGATTTCGTAGGTACCCATCGTTAAGAGCTGTCAAGATGACATGA CTTGTCGTATAGAAATCGTCGAAACATTACCTAAAGTCTTATCCTATCCT TCCGGTTCACCTATGCACGCGAGCACACCAGACGTGTGGAAGAAACTAAC GAAAGTCGCGCGTGAAAGGATTGATATCTTATCGTTTTATTGGACGCTGA AAAACTTCACTTACGATGAGGCAGTTGTAGGAGCGGAGATATTGGAAGGA TTAAAAGGAGCTGCAAGGAGAGGTTTGTTGTGTCTTACTGTATTAAATGT aatacacgtctttttataagaacatgcaaaaattttggaagcttttggat gttcttaactttttgagttttaagcctaaaagtgttcttattctcgccat tttttgagcatttttgtcctttttcttaagaaattcaGTGTTTTAGactc cgcaaagccttaaaatgttcttaacatattggCCATCGAatctttatgtt cttatatagtttgttcttatgaaataacGTGTATGCTTTGAGTTTGCACA TTTTTTTACTACTATGTGTAATCATTTTTTTGCGTCTCTAATTTTGAAAG TTGCTTTTTATCCGCATACACAACAACAAAAATTGtttgagtgcaacgac tgcctcgttcTGAAActattaccaaggtgattaaatctCTTGAGTCCtta aaaatgttacttttataaatagagtTAACTTCTTAGAAATCCCTCTTAAA ATCAATTCCTCTTGGAATTAATTATTATAAcaattgtttgaaaacgaggt aaaacgtagctcgtgacgtaatttatgaaaaggtctattgaaataCTATA ATCATTTCTCTAGGCATCAAAGTCAACATTGTGCAAAACGCGCCAACCAA ACAATTCCCAAACCTGGACACATTTGAATTAGCCAAAGAGGAGAATGTAG AAGTTCGTTCAATGAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACACC AAAGTTTGGGTTGTGGACAAGAGACATATGTATGTTGGAAGTGCAAACTT TGACTGGCGCTCTCTTACTGAGGTGAATACGATATCTTAGTATCTTGCTA AcacaacaaaaacttttttccttgGTTCTGGTTAATTTCATGGtgaaaag ctgaaatttttcaacaagtTGTAGCTTTTCACTCAAAGTTTATCCGAAAT GTCAGGGTGAATTTATTGTTAATTTCCAAACGGCTGACTACAGGCTAACA TGATAAACGACCAATTCAGCCAAATGAGATAATAAGCAAAAAACAACGGA AAGGACTAATTGTAGTTTGTACAAACTGATATTAGTCCGTAACGATTATC GTATTATCCTATAACACACATATTACTATATTACACGGACGATGAACGAC TCTAGTCTAGATTGACGACATCTCTTTACCGATTCTTCTAGGTCAAAGAG TTGGGTGCTGCACTTTACAATTGTACATGCGCGGGTGAAGActtgttcaa aatttttgacgtcaacTGGTTACTTGCACAAAAAGACTCACAAATCCCGT CACCGTGGCCTGAACAGTACCAAACTACTATCAATAAAGGTGGGTGAATT tgtatttcaagctaaaaatgggctcttccagaaaatgtccgtacacgGGG GTGAAGGATATATTGTCACCGGGGTAGcgaatcatcaaaatttgccctGT CAGGGgaggtaaatttgctctgtccgggggttgTCCGGGGtttcaactga tgcttgtctagggggtaaaacccgttgtATCTTCcacccccccatattca atttttttctggaaaagcccaatgttaCACTTTATATTGTGCTGTTAATG TGAAAAagattgtaaattaaaattgatgagtaagcaaacgatatcactct tatttagaaacaaaaacctttaaatttcTATAACTGGATTGAAATTGCGC TCACAGTGATTCTTCAAGTTATAATATATTAATGTCTATGATTTTATTCT TTATAtatttgtcaactttttttGCTGGTATAAATTTCTATAACTGGATT GAAATTGCGCTCCCAGTGATTCTTCAAGTTATAATTATATTAATGTCTAT GATTTTATTCTTTATAtatttgtcaactttttttGCTGGTTTAAATTTCT ATAACTGGATTGAAATTGCGCTCCCAGTGATTCTTCAAGTTATAATTATA TTAATGTCTATGATTTTATTCTTTATATATTTGTCAACTTTTTGCTGGTT CTAATACAAAAAGGAGTCAAAATTGAGGAATCCCCACTGAGTATTTTATG GTAATATCATCGTCTTATAGATCACCCACAAAACATTAAACTGGTGGATG CACCGCCCTTGGATTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCG CCTAAACGAACGTCTGATATTGACGCCATCATCGACTTGATCTCAAGGGC AGAGAAGTTTGTTTATATCGCAGTTATGGATTATTATGCAGCTTTTGTTT ATCAGAATAAAAGGTGAGATGTGATGCGAAGACCTTTTTCTCTTTGGTAC CCTTAGAGTTGTTTGTTAAAATGTCTACTCTCGGGTAGGCTGTACGCATC CCTTCTGATATATTTTGATATAgaggatgcgtatcgtgtataaaattccc gtctttgtgtttttgatttttagaaacttaatgattagcttgattagtaa gttttataCGAGAGATCTTTTCATTTGATTCGAGCTAAAAATTTGAATGC TTAATACAATCATGagcttttcaagaaaattgaatcAAGTTACCCaaaat ttggggtaactctcggacgggaattttatacacgactTTAAAACTCTCGG ATGCTAGTCTGGATTGAACGAGGAACTGGGAATAACATTGTCTTGgttga aaaaaagaattgattTGTTTTGGATATTTGAAAACAATTAATTACGTTAA GTGTgcttattttggcaaaaactaattttagcgaattttagtgaaatttg gAAATGGTAAACAACATTTTCAACATGGTAAACAATTTAACCCACTTTGA CTATCTGGTCTTGGCGGAAACTTATTCTAGCAAGGCAAAATGTTTCGCTA AAGTCACCAAAATTATTTCCTTCAATTCCTCCTCCTTCACCTGTTATTGT ATTTATTTAGATTCTGGCCCACCATAGACGATGCTCTTCGAAGTGCATCT TTCGATCGAGGAATCGAGGTCCGACTATTGACCAGTAAATGGCCTCACAC CAATGCACAGCAGACAGCTTTCATCAAATCGCTGAACGAATTTGGTAAAA TGCCTATGCCACACACTAGCGGAAGTATTACTGTGGTAAGTGGTATTCAA ATCAAGGACAAAACTAAGTACATTATGGACAACCAAGGTGTACTTGATTA TCCCTAGATTTTTAAGagtaatgaaaaaaattaactatGGACTATTTAGC TAAACTGGTCCGCATTTTTTTGTGACACACTTTAGTCACGTAAACACGAA GCCAAGAGGTGCCTACTCTGGTACTAAAACTGCAAAGTCCAATGGAAAAC GAAAGATACCATTGCTTTGCGGTGGATCAAGTAACATCATATAGTACATA CTTTAATGGGAGAATTCTATGTCTTGCTAGTTGTACTCCAGGCTcttatt ttaatttaatttaatttccttTTAGAAACAATTCGAGATGCCACCCAACG AAATTCCATTTGCACGTGTCAATCACAACAAATACATGGTGACTGATAAA GGAGGCTTCATTTCTACTTCCAACTGGTCTGGAGATTACTTCGCGACAAC TGCTGGTGTCAGCCTCATAGTAAATCAAACAGAATCACCACAAAACAAAA ACCAGGACCAGAAAATGCAAGATCAATTAAAAGACCTCTTTATGAGAGAT TGGAAATCACAATACACGAAGGGCTTATAATCTGGTCTGTGAATTACATT TTACGCAAACGTGATAACACAACGATCGTCCAAGTATGCAACTGTACttt aaactcgaacccagtcccttagctCGCTTTTGATGATTCACGAAAGGATT GTACCActaacctttatatatccctggaccaagtttctcaatcccagcta agcaaaatctttgatcggagttttttcgaaattggtaccctaatgggcgg cactactcaatagcggtgaaaatgcatcgagagcgctagatctacttttc ctcaaatacttttgatgatgtagcgtcGTTAGACGTTAacttttaacatt gcaatggcttcttctcgggtaccaattcaaaaaaactccgatcaaagatg gcgaatatagcttggtccagggataaataaaggtcagtggattgTACCAA TGtcaatcaataaaatcaaaaagttgcgcaagtggctctgggtatgAGAA TGACCTGGATGAATGAACTTGGATTTTCAAATTTGCTtgagtttttattt tatgattacTTG

Coding sequence (CDS) from alignment at scaffold_36:30664..38475+

>TCONS_00061553 ID=TCONS_00061553|Name=TCONS_00061553|organism=Clytia hemisphaerica|type=CDS|length=10185bp|location=Sequence derived from alignment at scaffold_36:30664..38475+ (Clytia hemisphaerica)
ATGACAGTCCTGGATAACGAGGGTGGGGCGCACCACCCTCAAGCTAATGG
CGtcgaaaatttcccacccaTAGAGAAACTGTCTACAAAACGTATGAGAA
GGAAGCAAAGTAAATGGACGTTGATCATcacatttttatcttttattttt
atcattattttaatCACGGTTGCTTATTTGGTTTCCAAAGGATTGTTTGT
GCATGAAGATGCTGAAAAGGTACCCATCGTTAAGAGCTGTCAAGATGACA
TGACTTGTCGTATAGAAATCGTCGAAACATTACCTAAAGTCTTATCCTAT
CCTTCCGGTTCACCTATGCACGCGAGCACACCAGACGTGTGGAAGAAACT
AACGAAAGTCGCGCGTGAAAGGATTGATATCTTATCGTTTTATTGGACGC
TGAAAAACTTCACTTACGATGAGGCAGTTGTAGGAGCGGAGATATTGGAA
GGATTAAAAGGAGCTGCAAGGAGAGGCATCAAAGTCAACATTGTGCAAAA
CGCGCCAACCAAACAATTCCCAAACCTGGACACATTTGAATTAGCCAAAG
AGGAGAATGTAGAAGTTCGTTCAATGAAACCAGAAACCTTAGGTGGAGGA
GTTCTTCACACCAAAGTTTGGGTTGTGGACAAGAGACATATGTATGTTGG
AAGTGCAAACTTTGACTGGCGCTCTCTTACTGAGGTCAAAGAGTTGGGTG
CTGCACTTTACAATTGTACATGCGCGGGTGAAGActtgttcaaaattttt
gacgtcaacTGGTTACTTGCACAAAAAGACTCACAAATCCCGTCACCGTG
GCCTGAACAGTACCAAACTACTATCAATAAAGATCACCCACAAAACATTA
AACTGGTGGATGCACCGCCCTTGGATTACTATTGGTCCACGTCACCGCCC
TCGTTTTGTGCGCCTAAACGAACGTCTGATATTGACGCCATCATCGACTT
GATCTCAAGGGCAGAGAAGTTTGTTTATATCGCAGTTATGGATTATTATG
CAGCTTTTGTTTATCAGAATAAAAGATTCTGGCCCACCATAGACGATGCT
CTTCGAAGTGCATCTTTCGATCGAGGAATCGAGGTCCGACTATTGACCAG
TAAATGGCCTCACACCAATGCACAGCAGACAGCTTTCATCAAATCGCTGA
ACGAATTTGGTAAAATGCCTATGCCACACACTAGCGGAAGTATTACTGTG
AAACAATTCGAGATGCCACCCAACGAAATTCCATTTGCACGTGTCAATCA
CAACAAATACATGGTGACTGATAAAGGAGGCTTCATTTCTACTTCCAACT
GGTCTGGAGATTACTTCGCGACAACTGCTGGTGTCAGCCTCATAGTAAAT
CAAACAGAATCACCACAAAACAAAAACCAGGACCAGAAAATGCAAGATCA
ATTAAAAGACCTCTTTATGAGAGATTGGAAATCACAATACACGAAGGGCT
TATAAATGACAGTCCTGGATAACGAGGGTGGGGCGCACCACCCTCAAGCT
AATGGCGtcgaaaatttcccacccaTAGAGAAACTGTCTACAAAACGTAT
GAGAAGGAAGCAAAGTAAATGGACGTTGATCATcacatttttatctttta
tttttatcattattttaatCACGGTTGCTTATTTGGTTTCCAAAGGATTG
TTTGTGCATGAAGATGCTGAAAAGGTACCCATCGTTAAGAGCTGTCAAGA
TGACATGACTTGTCGTATAGAAATCGTCGAAACATTACCTAAAGTCTTAT
CCTATCCTTCCGGTTCACCTATGCACGCGAGCACACCAGACGTGTGGAAG
AAACTAACGAAAGTCGCGCGTGAAAGGATTGATATCTTATCGTTTTATTG
GACGCTGAAAAACTTCACTTACGATGAGGCAGTTGTAGGAGCGGAGATAT
TGGAAGGATTAAAAGGAGCTGCAAGGAGAGGCATCAAAGTCAACATTGTG
CAAAACGCGCCAACCAAACAATTCCCAAACCTGGACACATTTGAATTAGC
CAAAGAGGAGAATGTAGAAGTTCGTTCAATGAAACCAGAAACCTTAGGTG
GAGGAGTTCTTCACACCAAAGTTTGGGTTGTGGACAAGAGACATATGTAT
GTTGGAAGTGCAAACTTTGACTGGCGCTCTCTTACTGAGGTCAAAGAGTT
GGGTGCTGCACTTTACAATTGTACATGCGCGGGTGAAGActtgttcaaaa
tttttgacgtcaacTGGTTACTTGCACAAAAAGACTCACAAATCCCGTCA
CCGTGGCCTGAACAGTACCAAACTACTATCAATAAAGATCACCCACAAAA
CATTAAACTGGTGGATGCACCGCCCTTGGATTACTATTGGTCCACGTCAC
CGCCCTCGTTTTGTGCGCCTAAACGAACGTCTGATATTGACGCCATCATC
GACTTGATCTCAAGGGCAGAGAAGTTTGTTTATATCGCAGTTATGGATTA
TTATGCAGCTTTTGTTTATCAGAATAAAAGATTCTGGCCCACCATAGACG
ATGCTCTTCGAAGTGCATCTTTCGATCGAGGAATCGAGGTCCGACTATTG
ACCAGTAAATGGCCTCACACCAATGCACAGCAGACAGCTTTCATCAAATC
GCTGAACGAATTTGGTAAAATGCCTATGCCACACACTAGCGGAAGTATTA
CTGTGAAACAATTCGAGATGCCACCCAACGAAATTCCATTTGCACGTGTC
AATCACAACAAATACATGGTGACTGATAAAGGAGGCTTCATTTCTACTTC
CAACTGGTCTGGAGATTACTTCGCGACAACTGCTGGTGTCAGCCTCATAG
TAAATCAAACAGAATCACCACAAAACAAAAACCAGGACCAGAAAATGCAA
GATCAATTAAAAGACCTCTTTATGAGAGATTGGAAATCACAATACACGAA
GGGCTTATAAATGACAGTCCTGGATAACGAGGGTGGGGCGCACCACCCTC
AAGCTAATGGCGtcgaaaatttcccacccaTAGAGAAACTGTCTACAAAA
CGTATGAGAAGGAAGCAAAGTAAATGGACGTTGATCATcacatttttatc
ttttatttttatcattattttaatCACGGTTGCTTATTTGGTTTCCAAAG
GATTGTTTGTGCATGAAGATGCTGAAAAGGTACCCATCGTTAAGAGCTGT
CAAGATGACATGACTTGTCGTATAGAAATCGTCGAAACATTACCTAAAGT
CTTATCCTATCCTTCCGGTTCACCTATGCACGCGAGCACACCAGACGTGT
GGAAGAAACTAACGAAAGTCGCGCGTGAAAGGATTGATATCTTATCGTTT
TATTGGACGCTGAAAAACTTCACTTACGATGAGGCAGTTGTAGGAGCGGA
GATATTGGAAGGATTAAAAGGAGCTGCAAGGAGAGGCATCAAAGTCAACA
TTGTGCAAAACGCGCCAACCAAACAATTCCCAAACCTGGACACATTTGAA
TTAGCCAAAGAGGAGAATGTAGAAGTTCGTTCAATGAAACCAGAAACCTT
AGGTGGAGGAGTTCTTCACACCAAAGTTTGGGTTGTGGACAAGAGACATA
TGTATGTTGGAAGTGCAAACTTTGACTGGCGCTCTCTTACTGAGGTCAAA
GAGTTGGGTGCTGCACTTTACAATTGTACATGCGCGGGTGAAGActtgtt
caaaatttttgacgtcaacTGGTTACTTGCACAAAAAGACTCACAAATCC
CGTCACCGTGGCCTGAACAGTACCAAACTACTATCAATAAAGATCACCCA
CAAAACATTAAACTGGTGGATGCACCGCCCTTGGATTACTATTGGTCCAC
GTCACCGCCCTCGTTTTGTGCGCCTAAACGAACGTCTGATATTGACGCCA
TCATCGACTTGATCTCAAGGGCAGAGAAGTTTGTTTATATCGCAGTTATG
GATTATTATGCAGCTTTTGTTTATCAGAATAAAAGATTCTGGCCCACCAT
AGACGATGCTCTTCGAAGTGCATCTTTCGATCGAGGAATCGAGGTCCGAC
TATTGACCAGTAAATGGCCTCACACCAATGCACAGCAGACAGCTTTCATC
AAATCGCTGAACGAATTTGGTAAAATGCCTATGCCACACACTAGCGGAAG
TATTACTGTGAAACAATTCGAGATGCCACCCAACGAAATTCCATTTGCAC
GTGTCAATCACAACAAATACATGGTGACTGATAAAGGAGGCTTCATTTCT
ACTTCCAACTGGTCTGGAGATTACTTCGCGACAACTGCTGGTGTCAGCCT
CATAGTAAATCAAACAGAATCACCACAAAACAAAAACCAGGACCAGAAAA
TGCAAGATCAATTAAAAGACCTCTTTATGAGAGATTGGAAATCACAATAC
ACGAAGGGCTTATAAATGACAGTCCTGGATAACGAGGGTGGGGCGCACCA
CCCTCAAGCTAATGGCGtcgaaaatttcccacccaTAGAGAAACTGTCTA
CAAAACGTATGAGAAGGAAGCAAAGTAAATGGACGTTGATCATcacattt
ttatcttttatttttatcattattttaatCACGGTTGCTTATTTGGTTTC
CAAAGGATTGTTTGTGCATGAAGATGCTGAAAAGGTACCCATCGTTAAGA
GCTGTCAAGATGACATGACTTGTCGTATAGAAATCGTCGAAACATTACCT
AAAGTCTTATCCTATCCTTCCGGTTCACCTATGCACGCGAGCACACCAGA
CGTGTGGAAGAAACTAACGAAAGTCGCGCGTGAAAGGATTGATATCTTAT
CGTTTTATTGGACGCTGAAAAACTTCACTTACGATGAGGCAGTTGTAGGA
GCGGAGATATTGGAAGGATTAAAAGGAGCTGCAAGGAGAGGCATCAAAGT
CAACATTGTGCAAAACGCGCCAACCAAACAATTCCCAAACCTGGACACAT
TTGAATTAGCCAAAGAGGAGAATGTAGAAGTTCGTTCAATGAAACCAGAA
ACCTTAGGTGGAGGAGTTCTTCACACCAAAGTTTGGGTTGTGGACAAGAG
ACATATGTATGTTGGAAGTGCAAACTTTGACTGGCGCTCTCTTACTGAGG
TCAAAGAGTTGGGTGCTGCACTTTACAATTGTACATGCGCGGGTGAAGAc
ttgttcaaaatttttgacgtcaacTGGTTACTTGCACAAAAAGACTCACA
AATCCCGTCACCGTGGCCTGAACAGTACCAAACTACTATCAATAAAGATC
ACCCACAAAACATTAAACTGGTGGATGCACCGCCCTTGGATTACTATTGG
TCCACGTCACCGCCCTCGTTTTGTGCGCCTAAACGAACGTCTGATATTGA
CGCCATCATCGACTTGATCTCAAGGGCAGAGAAGTTTGTTTATATCGCAG
TTATGGATTATTATGCAGCTTTTGTTTATCAGAATAAAAGATTCTGGCCC
ACCATAGACGATGCTCTTCGAAGTGCATCTTTCGATCGAGGAATCGAGGT
CCGACTATTGACCAGTAAATGGCCTCACACCAATGCACAGCAGACAGCTT
TCATCAAATCGCTGAACGAATTTGGTAAAATGCCTATGCCACACACTAGC
GGAAGTATTACTGTGAAACAATTCGAGATGCCACCCAACGAAATTCCATT
TGCACGTGTCAATCACAACAAATACATGGTGACTGATAAAGGAGGCTTCA
TTTCTACTTCCAACTGGTCTGGAGATTACTTCGCGACAACTGCTGGTGTC
AGCCTCATAGTAAATCAAACAGAATCACCACAAAACAAAAACCAGGACCA
GAAAATGCAAGATCAATTAAAAGACCTCTTTATGAGAGATTGGAAATCAC
AATACACGAAGGGCTTATAAATGACAGTCCTGGATAACGAGGGTGGGGCG
CACCACCCTCAAGCTAATGGCGtcgaaaatttcccacccaTAGAGAAACT
GTCTACAAAACGTATGAGAAGGAAGCAAAGTAAATGGACGTTGATCATca
catttttatcttttatttttatcattattttaatCACGGTTGCTTATTTG
GTTTCCAAAGGATTGTTTGTGCATGAAGATGCTGAAAAGGTACCCATCGT
TAAGAGCTGTCAAGATGACATGACTTGTCGTATAGAAATCGTCGAAACAT
TACCTAAAGTCTTATCCTATCCTTCCGGTTCACCTATGCACGCGAGCACA
CCAGACGTGTGGAAGAAACTAACGAAAGTCGCGCGTGAAAGGATTGATAT
CTTATCGTTTTATTGGACGCTGAAAAACTTCACTTACGATGAGGCAGTTG
TAGGAGCGGAGATATTGGAAGGATTAAAAGGAGCTGCAAGGAGAGGCATC
AAAGTCAACATTGTGCAAAACGCGCCAACCAAACAATTCCCAAACCTGGA
CACATTTGAATTAGCCAAAGAGGAGAATGTAGAAGTTCGTTCAATGAAAC
CAGAAACCTTAGGTGGAGGAGTTCTTCACACCAAAGTTTGGGTTGTGGAC
AAGAGACATATGTATGTTGGAAGTGCAAACTTTGACTGGCGCTCTCTTAC
TGAGGTCAAAGAGTTGGGTGCTGCACTTTACAATTGTACATGCGCGGGTG
AAGActtgttcaaaatttttgacgtcaacTGGTTACTTGCACAAAAAGAC
TCACAAATCCCGTCACCGTGGCCTGAACAGTACCAAACTACTATCAATAA
AGATCACCCACAAAACATTAAACTGGTGGATGCACCGCCCTTGGATTACT
ATTGGTCCACGTCACCGCCCTCGTTTTGTGCGCCTAAACGAACGTCTGAT
ATTGACGCCATCATCGACTTGATCTCAAGGGCAGAGAAGTTTGTTTATAT
CGCAGTTATGGATTATTATGCAGCTTTTGTTTATCAGAATAAAAGATTCT
GGCCCACCATAGACGATGCTCTTCGAAGTGCATCTTTCGATCGAGGAATC
GAGGTCCGACTATTGACCAGTAAATGGCCTCACACCAATGCACAGCAGAC
AGCTTTCATCAAATCGCTGAACGAATTTGGTAAAATGCCTATGCCACACA
CTAGCGGAAGTATTACTGTGAAACAATTCGAGATGCCACCCAACGAAATT
CCATTTGCACGTGTCAATCACAACAAATACATGGTGACTGATAAAGGAGG
CTTCATTTCTACTTCCAACTGGTCTGGAGATTACTTCGCGACAACTGCTG
GTGTCAGCCTCATAGTAAATCAAACAGAATCACCACAAAACAAAAACCAG
GACCAGAAAATGCAAGATCAATTAAAAGACCTCTTTATGAGAGATTGGAA
ATCACAATACACGAAGGGCTTATAAATGACAGTCCTGGATAACGAGGGTG
GGGCGCACCACCCTCAAGCTAATGGCGtcgaaaatttcccacccaTAGAG
AAACTGTCTACAAAACGTATGAGAAGGAAGCAAAGTAAATGGACGTTGAT
CATcacatttttatcttttatttttatcattattttaatCACGGTTGCTT
ATTTGGTTTCCAAAGGATTGTTTGTGCATGAAGATGCTGAAAAGGTACCC
ATCGTTAAGAGCTGTCAAGATGACATGACTTGTCGTATAGAAATCGTCGA
AACATTACCTAAAGTCTTATCCTATCCTTCCGGTTCACCTATGCACGCGA
GCACACCAGACGTGTGGAAGAAACTAACGAAAGTCGCGCGTGAAAGGATT
GATATCTTATCGTTTTATTGGACGCTGAAAAACTTCACTTACGATGAGGC
AGTTGTAGGAGCGGAGATATTGGAAGGATTAAAAGGAGCTGCAAGGAGAG
GCATCAAAGTCAACATTGTGCAAAACGCGCCAACCAAACAATTCCCAAAC
CTGGACACATTTGAATTAGCCAAAGAGGAGAATGTAGAAGTTCGTTCAAT
GAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACACCAAAGTTTGGGTTG
TGGACAAGAGACATATGTATGTTGGAAGTGCAAACTTTGACTGGCGCTCT
CTTACTGAGGTCAAAGAGTTGGGTGCTGCACTTTACAATTGTACATGCGC
GGGTGAAGActtgttcaaaatttttgacgtcaacTGGTTACTTGCACAAA
AAGACTCACAAATCCCGTCACCGTGGCCTGAACAGTACCAAACTACTATC
AATAAAGATCACCCACAAAACATTAAACTGGTGGATGCACCGCCCTTGGA
TTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCGCCTAAACGAACGT
CTGATATTGACGCCATCATCGACTTGATCTCAAGGGCAGAGAAGTTTGTT
TATATCGCAGTTATGGATTATTATGCAGCTTTTGTTTATCAGAATAAAAG
ATTCTGGCCCACCATAGACGATGCTCTTCGAAGTGCATCTTTCGATCGAG
GAATCGAGGTCCGACTATTGACCAGTAAATGGCCTCACACCAATGCACAG
CAGACAGCTTTCATCAAATCGCTGAACGAATTTGGTAAAATGCCTATGCC
ACACACTAGCGGAAGTATTACTGTGAAACAATTCGAGATGCCACCCAACG
AAATTCCATTTGCACGTGTCAATCACAACAAATACATGGTGACTGATAAA
GGAGGCTTCATTTCTACTTCCAACTGGTCTGGAGATTACTTCGCGACAAC
TGCTGGTGTCAGCCTCATAGTAAATCAAACAGAATCACCACAAAACAAAA
ACCAGGACCAGAAAATGCAAGATCAATTAAAAGACCTCTTTATGAGAGAT
TGGAAATCACAATACACGAAGGGCTTATAAATGACAGTCCTGGATAACGA
GGGTGGGGCGCACCACCCTCAAGCTAATGGCGtcgaaaatttcccaccca
TAGAGAAACTGTCTACAAAACGTATGAGAAGGAAGCAAAGTAAATGGACG
TTGATCATcacatttttatcttttatttttatcattattttaatCACGGT
TGCTTATTTGGTTTCCAAAGGATTGTTTGTGCATGAAGATGCTGAAAAGG
TACCCATCGTTAAGAGCTGTCAAGATGACATGACTTGTCGTATAGAAATC
GTCGAAACATTACCTAAAGTCTTATCCTATCCTTCCGGTTCACCTATGCA
CGCGAGCACACCAGACGTGTGGAAGAAACTAACGAAAGTCGCGCGTGAAA
GGATTGATATCTTATCGTTTTATTGGACGCTGAAAAACTTCACTTACGAT
GAGGCAGTTGTAGGAGCGGAGATATTGGAAGGATTAAAAGGAGCTGCAAG
GAGAGGCATCAAAGTCAACATTGTGCAAAACGCGCCAACCAAACAATTCC
CAAACCTGGACACATTTGAATTAGCCAAAGAGGAGAATGTAGAAGTTCGT
TCAATGAAACCAGAAACCTTAGGTGGAGGAGTTCTTCACACCAAAGTTTG
GGTTGTGGACAAGAGACATATGTATGTTGGAAGTGCAAACTTTGACTGGC
GCTCTCTTACTGAGGTCAAAGAGTTGGGTGCTGCACTTTACAATTGTACA
TGCGCGGGTGAAGActtgttcaaaatttttgacgtcaacTGGTTACTTGC
ACAAAAAGACTCACAAATCCCGTCACCGTGGCCTGAACAGTACCAAACTA
CTATCAATAAAGATCACCCACAAAACATTAAACTGGTGGATGCACCGCCC
TTGGATTACTATTGGTCCACGTCACCGCCCTCGTTTTGTGCGCCTAAACG
AACGTCTGATATTGACGCCATCATCGACTTGATCTCAAGGGCAGAGAAGT
TTGTTTATATCGCAGTTATGGATTATTATGCAGCTTTTGTTTATCAGAAT
AAAAGATTCTGGCCCACCATAGACGATGCTCTTCGAAGTGCATCTTTCGA
TCGAGGAATCGAGGTCCGACTATTGACCAGTAAATGGCCTCACACCAATG
CACAGCAGACAGCTTTCATCAAATCGCTGAACGAATTTGGTAAAATGCCT
ATGCCACACACTAGCGGAAGTATTACTGTGAAACAATTCGAGATGCCACC
CAACGAAATTCCATTTGCACGTGTCAATCACAACAAATACATGGTGACTG
ATAAAGGAGGCTTCATTTCTACTTCCAACTGGTCTGGAGATTACTTCGCG
ACAACTGCTGGTGTCAGCCTCATAGTAAATCAAACAGAATCACCACAAAA
CAAAAACCAGGACCAGAAAATGCAAGATCAATTAAAAGACCTCTTTATGA
GAGATTGGAAATCACAATACACGAAGGGCTTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038621XLOC_038621Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061553-proteinTCONS_00061553-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061553-exon-scaffold_36-1491911889:30664..30964TCONS_00061553-exon-scaffold_36-1491911889:30664..30964Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:30664..30964TCONS_00061553-exon-scaffold_36-1510915933:30664..30964Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:30664..30964TCONS_00061553-exon-scaffold_36-1575043694:30664..30964Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1491911889:33287..33581TCONS_00061553-exon-scaffold_36-1491911889:33287..33581Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:33287..33581TCONS_00061553-exon-scaffold_36-1510915933:33287..33581Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:33287..33581TCONS_00061553-exon-scaffold_36-1575043694:33287..33581Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1491911889:34030..34285TCONS_00061553-exon-scaffold_36-1491911889:34030..34285Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:34030..34285TCONS_00061553-exon-scaffold_36-1510915933:34030..34285Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:34030..34285TCONS_00061553-exon-scaffold_36-1575043694:34030..34285Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1491911889:34877..35085TCONS_00061553-exon-scaffold_36-1491911889:34877..35085Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:34877..35085TCONS_00061553-exon-scaffold_36-1510915933:34877..35085Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:34877..35085TCONS_00061553-exon-scaffold_36-1575043694:34877..35085Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1491911889:35455..35602TCONS_00061553-exon-scaffold_36-1491911889:35455..35602Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:35455..35602TCONS_00061553-exon-scaffold_36-1510915933:35455..35602Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:35455..35602TCONS_00061553-exon-scaffold_36-1575043694:35455..35602Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1491911889:36334..36526TCONS_00061553-exon-scaffold_36-1491911889:36334..36526Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:36334..36526TCONS_00061553-exon-scaffold_36-1510915933:36334..36526Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:36334..36526TCONS_00061553-exon-scaffold_36-1575043694:36334..36526Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1491911889:37174..37348TCONS_00061553-exon-scaffold_36-1491911889:37174..37348Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:37174..37348TCONS_00061553-exon-scaffold_36-1510915933:37174..37348Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:37174..37348TCONS_00061553-exon-scaffold_36-1575043694:37174..37348Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1491911889:37689..38475TCONS_00061553-exon-scaffold_36-1491911889:37689..38475Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1510915933:37689..38475TCONS_00061553-exon-scaffold_36-1510915933:37689..38475Clytia hemisphaericaexon
TCONS_00061553-exon-scaffold_36-1575043694:37689..38475TCONS_00061553-exon-scaffold_36-1575043694:37689..38475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:30664..38475 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.30725 4.83763 4.08506 3.33049 49.6418 38.0195 29.7639 29.1312 16.4687 17.4155 16.6862 11.5409 13.6972 15.2941 10.8997 11.8881 23.6989 22.5555 12.7518 10.4441 19.1441 18.291 14.1339 14.5735 28.4092 28.8096 5.97781 5.05975 9.24789 9.06032
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001736PLipase_D/transphosphatidylase
IPR032803PLDc_3
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
Blast
BLAST of TCONS_00061553 vs. Swiss-Prot (Human)
Match: PLD3 (Phospholipase D3 OS=Homo sapiens GN=PLD3 PE=1 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.605e-100
Identity = 174/408 (42.65%), Postives = 239/408 (58.58%), Query Frame = 3
Query:  633 CRIEIVETLPKVLSYPSGSPMHASTPDVWKKLTKVARERIDILSFYWTL-KNFTYDE---AVVGAEILEGLKGAARRGIKVNIVQNAPTKQFPNLDTFELAKEENVEVRSMKPETLGGGVLHTKVWVVDKRHMYVGSANFDWRSLTEVKELGAALYNCTCAGEDLFKIFDVNWLLAQKDSQIPSPWPEQYQTTINKDHPQNIKLVDAPPLDYYWSTSPPSFCAPKRTSDIDAIIDLISRAEKFVYIAVMDYYAAFVYQN-KRFWPTIDDALRSASFDRGIEVRLLTSKWPHTNAQQTAFIKSLNEFGKMPMPHTSGSITVKQFEMPPNE----IPFARVNHNKYMVTDKGGFISTSNWSGDYFATTAGVSLIVNQTESPXXXXXXXXXXXXXXXXFMRDWKSQYTKGL 1829
            C   +VE++P+ L +P+ S  + ST   W  L   A   +DI SFYWTL  N T+ +   A  G E+L  L+  A +G+ V I  + P+   P  D  +   +   +VR +  + L  GVLHTK WVVD+ H Y+GSAN DWRSLT+VKELG  +YNC+C   DL KIF+  W L Q  S IPS WP  Y T  N++ P  I L   P L Y  +++PP  C   RT D+ A+++++  A  F+Y+AVM+Y     + +  RFWP IDD LR A+++RG++VRLL S W H+     AF+ SL     +   HT   I VK F +P +E    IP+ARVNHNKYMVT++  +I TSNWSG+YF  TAG SL+V Q            ++ QL+ +F+RDW S Y+  L
Sbjct:   81 CEAVLVESIPEGLDFPNASTGNPSTSQAWLGLLAGAHSSLDIASFYWTLTNNDTHTQEPSAQQGEEVLRQLQTLAPKGVNVRIAVSKPSGPQPQAD-LQALLQSGAQVRMVDMQKLTHGVLHTKFWVVDQTHFYLGSANMDWRSLTQVKELGVVMYNCSCLARDLTKIFEAYWFLGQAGSSIPSTWPRFYDTRYNQETPMEICLNGTPALAYL-ASAPPPLCPSGRTPDLKALLNVVDNARSFIYVAVMNYLPTLEFSHPHRFWPAIDDGLRRATYERGVKVRLLISCWGHSEPSMRAFLLSL---AALRDNHTHSDIQVKLFVVPADEAQARIPYARVNHNKYMVTERATYIGTSNWSGNYFTETAGTSLLVTQN-------GRGGLRSQLEAIFLRDWDSPYSHDL 476          
The following BLAST results are available for this feature:
BLAST of TCONS_00061553 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLD31.605e-10042.65Phospholipase D3 OS=Homo sapiens GN=PLD3 PE=1 SV=1[more]
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