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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061869 ID=TCONS_00061869|Name=TCONS_00061869|organism=Clytia hemisphaerica|type=transcript|length=1963bp
GTCGATTTTTCGTCAATAATAATATGTTTAGGTTCTATCTTTCGTCGCTC
AATACTAAAATCTAATACAAAAATATAGCTTTACGTCAATGATTAAAATG
ATATATGATAACCAGAATATTCTGTCTTAAGCAGCATGTCAAAAGGGacg
ttttggaaatttttttttctaccgAAAGAATAATCACATTAAAGTTTGGT
GTTTGCGAAAGTTTTCAAGAGTCTGTTCATACGATTGTTTGTTTTACTAT
GGACGCAATTAAATCAAATTTTCGAAATCGGTATTGTGAAATTGACTTTT
CATACTTCAAAAACAAACATTTAATCGGCcattttgaaagttcttcttAA
TATAGGTGGACTCTGTTTGCCTGAAAACAACAATGATACCTTCATAACCT
TCAATCAAGTGAATTTTTGTGGAAAATCAAATGttgaaaaacaaacttta
gattTGTTGTATAATCTTATTTCTAAACTTCACCCTAGATATTTGAATGG
TTGTTCATAATTGCTCGAAAACAGTCCCCTTTGGCtgcaaaatgaatcaa
aaaggaaaatattcagTTGATATATGACTCATTGTAAAAACTCTAGAAAA
TACGTTCGTCAGTTCTCCGTCGTTCATACCCATATTCAGGGTCCCTAAAT
AGTATTTATCTCCTGGACGTAAAGTGTCCAGTCTTTCTGATATGACATCT
TCCAAGACTTTTTGACGCAAAGAGCATCGCATAATCGTTTACATCAAAAC
ACTCTCGTCCATACAAAACTATACAAAAGTTTGACCTTCATTAAACTGTA
GTTACTGAAGAATTATAACAGTTTGTGATTTCATTGCACTTTATCAATTG
AACTAGTAGTCGGGCTCAAAGTCATAGAATGTAGTACCCTCTTCCTCGGG
CATATTCATTTCTTTATCATAAATGTCTTCATAAACTCTGGCGATCCTTG
GTGAATGAGGAATGTGACTTCTCTtacgttttcttttctttttatcagTG
CAACATCCATCTTTGGCGCATGAAGGACTACAATGCTGTTTGCATTCACT
TGGACAGTTCGCCGGAGATGCATTGGTAGATGCGCGCTGTGCAAGGACGG
GAGGTTGCTCTGGTCTCAGGACATGTGAGACATGGATGACTCTTGTCATG
GGTTGTGGACTGTCAGCTTCGGATGAAGGTTGCACCTCTGACCTCATTTC
TTGTACGATGTTTGGGTCCAAGAACGGTCGACAGCAATCGAAATCACATC
CAGGGGCACATGACATTGGACATGATCCTGGACATGTGTCGAAGGGGGAG
GGACCGGCTACTGGTAAAGTTGGTGGCTGCTTCTCTTCCTTCTTCGGTGG
TGAaggtggtggtggtggaggtggCATTGCGGGCATCATGGCTCCGCAAC
AGTCAGGTGAACAAGCGGGTGCACAGGATGCAGGACATTGTGCGTTACAG
ATTTGTGCGGGTTCCATGTAACCAGGACAACACTGTGCGGGACACGAAGC
TTCACATGAGTTGATACACCCTCCGAAACATCCTGCTGGTTGGGCGGGCG
CCATAGGGGCCACAGGTGGAGGTGCTTGAACTACAGGTGCTTGAGCGGCT
GGTCCACCACAACATGTATCAAGACAACTTGGAGCGCACGCctggaaaaa
aaatagaaattagtTTTTGTTATTTAGTTATATCAGTTTTACATATATGT
TGCGCTCGCATCCGCAATTATGGCGTCATTTTAGAATCAGGCAAGCAGTG
GACAAAAAACCAATCATGGGTCACTCTATGAATGAGACGGGTGggtaatt
tttgtattttgggtAGTAGATGCCAATTTTTCAGAGAAGCTTTTAATCGA
ACTGTGATTATCACGGTAATTTTTTATGGTTTCGTGCAGAAAACCAATAT
TTTTGCATGTTTGCGTCGGCACGCTCCTTAAAGAAATAGAATGCTTTCTT
TGTTTGTAAAGTG Run BLAST on NCBI transcript from alignment at scaffold_361:301536..303498+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061869 ID=TCONS_00061869|Name=TCONS_00061869|organism=Clytia hemisphaerica|type=transcript|length=1963bp|location=Sequence derived from alignment at scaffold_361:301536..303498+ (Clytia hemisphaerica)
GTCGATTTTTCGTCAATAATAATATGTTTAGGTTCTATCTTTCGTCGCTC
AATACTAAAATCTAATACAAAAATATAGCTTTACGTCAATGATTAAAATG
ATATATGATAACCAGAATATTCTGTCTTAAGCAGCATGTCAAAAGGGacg
ttttggaaatttttttttctaccgAAAGAATAATCACATTAAAGTTTGGT
GTTTGCGAAAGTTTTCAAGAGTCTGTTCATACGATTGTTTGTTTTACTAT
GGACGCAATTAAATCAAATTTTCGAAATCGGTATTGTGAAATTGACTTTT
CATACTTCAAAAACAAACATTTAATCGGCcattttgaaagttcttcttAA
TATAGGTGGACTCTGTTTGCCTGAAAACAACAATGATACCTTCATAACCT
TCAATCAAGTGAATTTTTGTGGAAAATCAAATGttgaaaaacaaacttta
gattTGTTGTATAATCTTATTTCTAAACTTCACCCTAGATATTTGAATGG
TTGTTCATAATTGCTCGAAAACAGTCCCCTTTGGCtgcaaaatgaatcaa
aaaggaaaatattcagTTGATATATGACTCATTGTAAAAACTCTAGAAAA
TACGTTCGTCAGTTCTCCGTCGTTCATACCCATATTCAGGGTCCCTAAAT
AGTATTTATCTCCTGGACGTAAAGTGTCCAGTCTTTCTGATATGACATCT
TCCAAGACTTTTTGACGCAAAGAGCATCGCATAATCGTTTACATCAAAAC
ACTCTCGTCCATACAAAACTATACAAAAGTTTGACCTTCATTAAACTGTA
GTTACTGAAGAATTATAACAGTTTGTGATTTCATTGCACTTTATCAATTG
AACTAGTAGTCGGGCTCAAAGTCATAGAATGTAGTACCCTCTTCCTCGGG
CATATTCATTTCTTTATCATAAATGTCTTCATAAACTCTGGCGATCCTTG
GTGAATGAGGAATGTGACTTCTCTtacgttttcttttctttttatcagTG
CAACATCCATCTTTGGCGCATGAAGGACTACAATGCTGTTTGCATTCACT
TGGACAGTTCGCCGGAGATGCATTGGTAGATGCGCGCTGTGCAAGGACGG
GAGGTTGCTCTGGTCTCAGGACATGTGAGACATGGATGACTCTTGTCATG
GGTTGTGGACTGTCAGCTTCGGATGAAGGTTGCACCTCTGACCTCATTTC
TTGTACGATGTTTGGGTCCAAGAACGGTCGACAGCAATCGAAATCACATC
CAGGGGCACATGACATTGGACATGATCCTGGACATGTGTCGAAGGGGGAG
GGACCGGCTACTGGTAAAGTTGGTGGCTGCTTCTCTTCCTTCTTCGGTGG
TGAaggtggtggtggtggaggtggCATTGCGGGCATCATGGCTCCGCAAC
AGTCAGGTGAACAAGCGGGTGCACAGGATGCAGGACATTGTGCGTTACAG
ATTTGTGCGGGTTCCATGTAACCAGGACAACACTGTGCGGGACACGAAGC
TTCACATGAGTTGATACACCCTCCGAAACATCCTGCTGGTTGGGCGGGCG
CCATAGGGGCCACAGGTGGAGGTGCTTGAACTACAGGTGCTTGAGCGGCT
GGTCCACCACAACATGTATCAAGACAACTTGGAGCGCACGCctggaaaaa
aaatagaaattagtTTTTGTTATTTAGTTATATCAGTTTTACATATATGT
TGCGCTCGCATCCGCAATTATGGCGTCATTTTAGAATCAGGCAAGCAGTG
GACAAAAAACCAATCATGGGTCACTCTATGAATGAGACGGGTGggtaatt
tttgtattttgggtAGTAGATGCCAATTTTTCAGAGAAGCTTTTAATCGA
ACTGTGATTATCACGGTAATTTTTTATGGTTTCGTGCAGAAAACCAATAT
TTTTGCATGTTTGCGTCGGCACGCTCCTTAAAGAAATAGAATGCTTTCTT
TGTTTGTAAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061869-exon-scaffold_361-1491911889:301536..303498 | TCONS_00061869-exon-scaffold_361-1491911889:301536..303498 | Clytia hemisphaerica | exon |
| TCONS_00061869-exon-scaffold_361-1510915933:301536..303498 | TCONS_00061869-exon-scaffold_361-1510915933:301536..303498 | Clytia hemisphaerica | exon |
| TCONS_00061869-exon-scaffold_361-1575043694:301536..303498 | TCONS_00061869-exon-scaffold_361-1575043694:301536..303498 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_361 | supercontig | scaffold_361:301536..303498 + |
Blast
The following BLAST results are available for this feature:
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