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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061969 ID=TCONS_00061969|Name=TCONS_00061969|organism=Clytia hemisphaerica|type=transcript|length=2787bp CATAACAATGGTCGATCGCTCGTTCAAGATACCAGATTTCCAGATTTAGG TTAACTATGAAAAGGATTTGGGGTAGTGCTGTTTTGGTCATTGTTTTTGG GATATTTATCATCTCGATCAAAGATATTCTTCTCAATGTTGAAGAGAACG GatGTACAATGACCTGGATGTATGAATATCCAAAATATATTCCTGTTCCA ATGGGTGTAGAGATCAAGAATAAGTTTCCAAAGTACAATCTCTTTGTATA TGGGGAGGGAGCTTATGCACAACATCTTTTTGGTATGCGAGACAATATTC AACTGGATGGTGTCCCTGCTCTATTTGTTCACGGCAACTCTGGTAGATAC AAACAGGTGCGTTCCCCTGGTTCTGTGTCATTGTCGAAATCCGAACGAAA AGCATACCATTTCAACTACTTCAGTGTTGATTACGAAGAAGAATTTTCTG CTTTATTTGGTGAATATCTTCACAAACAAACTTTGTTTCTCTCACATGTC ATTGATCGTGTTTTTGAATGTTACCAAAGAACTGCAAACAAACCAACCTC TCTGATTCTTATTGGACATTCAATGGGAGGCATGGTGATTCGTGGTTTGT TTACATTACCCCATTTCGACCACAATCAAATTAATACAGTAATCACCTTA GCAACACCTCATTTGGAACCACCAATCAATCTAGATCCACGCATCAATGA ATTCTATGATAAAGTTAATAGATATTGGATTGAGCATCAAAATAAAGTCG AGAATTTGACTTTTTTATCTCTTGGTGGAGGGTTTCGCGATTATCTCGTA CGAAGTGATTTATGTCTCTACAAAAGGTCAAGCCCAAACCATTTTACAAC TTTGACGACATCTTTACCAAGAATCTGGCTATCAAATGACCATCAATGCA TCGTGTGGTGTAATCAGTTGGTAAGAGCCCTCACCAGAACCTTTTTCAAC ATGATTGATCCTAAATCTAAACAAATCACCAACAACCATAAGAAGCGAAc caaaattttgctgcaaactTTATTTTATGAGAAACAGAAGCACTTAAGAA TCACGCtagatttcaatgaatgtagcCCAATTGACTATATTAACAATAAA ATTACATTAATTCGTAAAAGAGACTGTGTCAAAGTCAATATTTCAGAGAG TGGACAAATAGTGGATGTTTGGTATCATAGCAACAAAATAGATTCATCTT TGATTCGATGTGATCCAAACCAAAAATGcaaaactttgaattttgcTACC CAACTTCCAGACGATTCTCAATTCATTTCAATCAAAACTGAAGCAAAAAA TCAATACTATTTAAACCCTCAGTATGgagatcttcatttttcaatcggGA AGATATTGGACATTGTGAACAGGATTCAATTACCATTGTTAAATGGTCTG GATACTGATGTTTCCTTACCAACATCTTCTTTCTATCATGAAATCAATCT CCATGGATACTCTGCTACCTGGCAATGCTTCAAAGTAGAGATTCTAGGtg ctaaaaaaaaaataattgattctcctatcatcaaaattgaaaacccTGAG TCCTCAGAGATTAAcgtaaaatcattttcaaacaaTGAGCTACATAAAct ggatttgaaattttttacggTACCTACTGATGGAACATTGAAAATGTACA TTTGGAGTCGAAAAGAATTTGCAACAGTTCGAATTAAATTAACAATCGAT TGGGAATCAAGTTTAGGTCAGTTGACACGATTTCAGACACGGTCTATTGC ACGTTACACACTTGTTTTGTACACCTTTCAAAAATGTAGCCAAAAATCTT CAGTGCAATCGTTCGCAGTTCTTTTTGCCTTTGCCAAGACTGGACTTTTC ATATTAGAACACCATCTAGATGGTATTGGAGTATTACATTACTTTTATCA GATTGTCTTTCCAGAAATGTACAGTTTTGTTGTTAGCATGTCTACGGTTT TCTTATTGGACATTATTGGACAAATCTTATGGAAGGTTGTTAGAGGAATG ACTTTTAGATACATATCAATTACCAATTCGAGAGCTTTAAAATTAATATG GTGTTTAATCATTGTATTAATATCTTCAACAATCTATTATTCCTTTGGAT CCGTTTTTGTCCTCATCCCGTGTTTCATAGCCCACCTGATAACAGAATGC GTTCAGCAATCAAACAAACGATCGGATCTTCTGGCATTTTTACCGACGAC GCTGGCAATATCAATTGTACCTTACATTGTCACTGTCAAGGATGTATTGC TTGGGTTTCCCATACAATCGATTCGTTTAGGAAATATTGATCCGATAGCA CTGGGTTATGTACTTTATATGATTTCGTTCTCAACTGGATTCCAATTCAC TTTAGCACCACCGAAAATGGTAACTTATGTTTTGCCATTTATATTTGCGC CATTTATGTGCAAAGAACTAGTAAACTTTTATAATGTAGGGTATTTAGCC CTTATTTGTATGGCAATTAAAAGATGTAGTTTTCATAGTGAGGAAAAGTA GAATGATTTTAACATTTCAATTTCCTTGTACTACGGTTAATTGATTTTCC TTAAGGGAACGTTTATTTCCCCTTTCAAAAATCTGCAGCCTAAAGAGGAG GAGCCAGAAATCTTTTTTCACGTTGTATGTCGAGGGTTTTAACTCGCTAA ATTGAGAAAGTTCAGCATAAAAAAACACAAGGTTGGCTATATTCCAAACA GATAAGTTGCATCTTTTAGGTGTACAAGTTTTTGCATGCAGAAACTTTCG CGCAGTCGAATTATCCCAaaagttttatatattttcG Run BLAST on NCBI protein sequence of TCONS_00061969-protein >TCONS_00061969-protein ID=TCONS_00061969-protein|Name=TCONS_00061969-protein|organism=Clytia hemisphaerica|type=polypeptide|length=814bp
MKRIWGSAVLVIVFGIFIISIKDILLNVEENGCTMTWMYEYPKYIPVPMG VEIKNKFPKYNLFVYGEGAYAQHLFGMRDNIQLDGVPALFVHGNSGRYKQ VRSPGSVSLSKSERKAYHFNYFSVDYEEEFSALFGEYLHKQTLFLSHVID RVFECYQRTANKPTSLILIGHSMGGMVIRGLFTLPHFDHNQINTVITLAT PHLEPPINLDPRINEFYDKVNRYWIEHQNKVENLTFLSLGGGFRDYLVRS DLCLYKRSSPNHFTTLTTSLPRIWLSNDHQCIVWCNQLVRALTRTFFNMI DPKSKQITNNHKKRTKILLQTLFYEKQKHLRITLDFNECSPIDYINNKIT LIRKRDCVKVNISESGQIVDVWYHSNKIDSSLIRCDPNQKCKTLNFATQL PDDSQFISIKTEAKNQYYLNPQYGDLHFSIGKILDIVNRIQLPLLNGLDT DVSLPTSSFYHEINLHGYSATWQCFKVEILGAKKKIIDSPIIKIENPESS EINVKSFSNNELHKLDLKFFTVPTDGTLKMYIWSRKEFATVRIKLTIDWE SSLGQLTRFQTRSIARYTLVLYTFQKCSQKSSVQSFAVLFAFAKTGLFIL EHHLDGIGVLHYFYQIVFPEMYSFVVSMSTVFLLDIIGQILWKVVRGMTF RYISITNSRALKLIWCLIIVLISSTIYYSFGSVFVLIPCFIAHLITECVQ QSNKRSDLLAFLPTTLAISIVPYIVTVKDVLLGFPIQSIRLGNIDPIALG YVLYMISFSTGFQFTLAPPKMVTYVLPFIFAPFMCKELVNFYNVGYLALI CMAIKRCSFHSEEK Run BLAST on NCBI transcript from alignment at scaffold_361:112496..121330- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061969 ID=TCONS_00061969|Name=TCONS_00061969|organism=Clytia hemisphaerica|type=transcript|length=8835bp|location=Sequence derived from alignment at scaffold_361:112496..121330- (Clytia hemisphaerica) CATAACAATGGTCGATCGCTCGTTCAAGATACCAGATTTCCAGATTTAGG
TATTTAAGTTACTGTTTTTAACTCTCATCTCAATTTTTTTAGTAAAACAA
TACAGTCTGTCATTCAAATATGTGTTATTTTTCTTTTGTGATGAATAATC
TTGTCCCTTGTGCCCCTTGGTTACTGCTGTGAGACCTTTTTTTAAAGTAT
AAATAAAGCCATCCAGGCGGTGTCAATCGAACTGTTCGATTATCGAACTA
ATCGAACTTAATCGAATCCTATCGAACGATAGCTGTTCGATTACCGAACC
CAATCGAACACCTATCGAACTGGGAAAACTTTTGTAAAGTTTGATGACTG
TTCGATTATACGATTATAGTTCGATCGCAGTAGTTCGATGAATACGATTG
AGGTTCGATCAGTTTGATTAAGATCAATGAAGTTCGATTGGTTCGATTAA
ATCAATTTATACCTTGCCGCCCAATTTTTTATTTATATTCCGAGGGCGTA
TTGGCGGCCGCCCACAGGCCATTCTCGCGGGCCATCCTATATCTATCCCA
TCGGATGGGACAAGCTGGAGCTTTTACAAGCTATTTGGTCGTATAATTTG
TAAAAAAAAAAAGATTTTCATCTTTATTACTTTCTTTAAAGAAAGAAGCA
TTCGGTGCCTGTGTTTTGATTAAACAACCTCGTAATTTTCTGAAAGGTAA
AGAAAAGTAGAATCAATCCGACACAACCAGTCAGTACCTTTAGCCAAATA
GACCTTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGCAG
AAAAACAATGATAAAACCATGCATAATTATTACAATATGCATGATACAGT
AATTATGCATGGCTCTATCATTGTTTTTATGGGCTGGACTACATAATTAT
TCAACAGGACGTCCTCTTTGAAAAAAGGTCTATTAGGAACATTTTTCTTA
CTTTTACTAGTATTCCTAATTAGGAATCTTATTCCTAATTAGGAAGAAAT
ATTTAAAAGTTTAATATCTCTGAAACAAGCTACATTCGCAAATTCCAAGT
ATGACCAATAGATTCGGTATACCAAATATGATAACTGTGCAAAAAATTGA
AAAATTTCATTCGCGGATGGTGGAATTATTAACGCCCCAAAAAAATAATT
CCAAATTAGGAATTAAACGAACTGCTGCTTTTATTATCACGAAGAAAAAC
AGAAAGTGAGTTTCCCGCGTTTTATAAATAAGATGTCAATTTACTACTGG
GAGAAGTGAAGCTTTTTCTAGGGATTATAGCTCGGTCCCCCGAGCAAGTC
AATAGCTCAATCTTTCTTTCCCACCTAAATGGAATGATAAGAATCTTATG
AAGTACTTTTTAACGTGCGATTTTTTCTATTTTTGGAGAAAATCTAGGTA
TTTGCTTCATATTCCTAATTAGGAATTTTTTTCTTCCTAATTAGGTATAA
GATTCCTAATTAGGAATACTAGTAAAAGTAAGAAAAATGTTCCTAATTTG
GCTAAAGGTACTGACTGACAACCATCGAACCACATCAAACTTAAATCGAA
CTCATCAAACATCAATGGAACTTCATCGAACAAAGAAAACTCATCGAACT
AAATCGAACTTATCAAGAAATTTACATAAGGTTTGATAGCTGTTCGATCG
GGTTCGGTAATTGTACAGCTATCGTTCGATTTTGTTCGATAAAGTTCGAT
GGTTCGATGACGAAAATCAGTTCGATAGGGTTCGGTTGACACCGCCTGGA
TAAAGAGGGAATTGAATGACAAATTTTGGTTGGGTGATTTTGGCTGCTGC
ACGTTTTATTTTGTTTCAAACTTTCAAGTTTCAATTAATTGTCTTGTGAA
CTTGATTCAGGTGATATACCTTGTTGTTGCAAATACATCCTGTAGATGAC
TGATGTGATGTTGTTTTGTCTGAAAGCTTGATTTCCTAGTGTGACTAACT
GTCATTTATACTGTCAACTGCTCTAACTTGGGACGATACACCTTTCCCGT
AATTAAACTTCTCAGAAATGGCCCGGGAAAATGTGCGCTCCACCGTTGTG
CATAAAATTGTTTGGGAGGTAAACAAACGTGTTTTTGCCTGCGAGGGGTT
AGTAGGGAAAGTGGGTTTTCAGCTTCTAACTTTTGATAGAGATCTTCTTT
TGGCAAAAGATTTTCAGGGTGGTATAATATCATGAATAGATTGAACATAC
CAAAATTTGAGGGGATTTTGTTTGACAGAACTTAAAAAAAGCTCAAAAAA
CCAACTTTCCCTANGAGGGGATTTTGTTCGACAGAACTTAAAAAAAGCTC
AAAAAACCAACTTTCCCTAAGGAAACGCAGGCAAAAATGGGTTTGTTTAC
CTCCAGAGCCCAAACGGTGGAGAGCATCAAAATAATGCGCGCTCACTAGT
TTTACGAATTACAGGAAAGGTGTATTGGTAAATAGCACACTAAAAAATAC
AACTCTATAACAATATCTCTGTATCTTTCCTCTTTTTTTGCAAAAGTTTC
AGGGATAATGATAATTGAGTACTATCATAAAGCTAGAATCACTTTGTGTA
CTCTCTCTTGAGAAAACGATTGACAGATTAATTTTTTTTCACCTGTGAGG
GAGTTTGCTTTGCAGGTGTTCTGCGGGGATTGCTTTTTTTAACCCGGCTC
AATCCTCAAACCACAAAAAAATAGCAGACCATTTTGATCATTGTTTTGGG
AATTTTTAATTTTTCCTGACAGAATATCCTTTGTTTGATTCTCAAAATGA
TGACAGTACCGTTATAAATTTTGTTTGATCACAATCTAACAATTTACAAT
GCACAATCCGCAATCCATGTTTAAAATATATATCAATTCATGCATAATTG
AAATAAAAAAAATATTTATGCGAATTACGTTCGGTGAAACTCAATTATTT
TTAAAAACATCATTCATGTAAAATTATACAAATTTTAATTATATTCAACA
AAGCTCACATTGCGTTTTCCCAATTGTACCATGTTCCCTCTCTGTGTTCA
ATTCAAATTCAGTCACATCACAAGATTAATAGAAAGTAAAACCATGTACA
TATAGACCTTCTGTACACTTTCTCTTTCTTGAAGGCTTCCCCAATTTTAT
AGATCTGTCTTTGACGCCAGAAATTGTAGCAATAGAAATTTTGCTGCCTG
TTTTATTTACTACCGGGTGCACCACAAAAAAGTTTCTCTCTTTGAAACTA
ATTTTCTCGAAATCTAAAAGTTTTAAAAGAACCATTCTTATTTCATTGGA
AAGAAGAAAGATAGACTTAAATTTTGATGGGTTATTTATTAAATTTGATT
CATTAGATCAAAGGTTATGTCCAATTGAATAAAAATGTTACTTTCAGAAA
GTGCTCGAAAACGTTAAAACTCGACCTATCAAATTTTTACTTGAAATTTG
GCAATCGCAATAGCCTTTACATGATTAAGAGCATTTTTCATTAACTAAAC
ACAAATTTTGAAACTGAAGGGTCGAAAGGGTTCAAAATCTTCATCAAAAT
TAATTTGATTTAGTTTTACCGAAATTTTCCTCAGATTTTTGGTTCTAGAC
TGGNCCATACCATTATGATCCTCCATATTTGATGTATTTTTATGAATTCT
ACCAGATTTTTTGGCCTTTTTCGACGAATTTTCTTCCTTTCATTGAAATT
CAACCTTCCTTTANAAATTCTATGTAAGGCTGAATCTACCTCGAAACCCA
TATTTGACGTAGTCAGAAAAAACACATCATCTTTCTAATGAATATTTCGG
CCAACTGGCCTTTTTCAACATAAAAATGGATTTATTTGACAAGGTTTATA
TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAATAGGAATGGTTCTTTTAAAATTTTTAGATT
TCGAGAAAATTACTTTTAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTA
TTTTCCTTTTTTGCATTTAGAAAGAAATTATTAAATTTGATTACTTTTAT
TATTCGTAGTTTCATTGCATACTTATTTTCTTTGCATAAATTTACTGTTA
TGAAAAAAAAAGGAAAAAAGGTTTGTTTTGGAATTATGTTATGTAATCTT
ATGATCTTATGCTCGATGCATGAATCATACATCTTAAATTATTAGATTGT
GCATCTTAAATTACACCAACCCCAAAATGAGATGAATTATTTCGTTTCTA
TGCACCAGTTTACTTGTAAAAATCTGATAAATTAGATGGTGTTGTCATTA
AAAAACTATTGTTTGTAATAATTTGTTAATCAACAGACTGCTATGATAGA
CTTAACAACTACTGTAAGTTGGTTTAATGTCAACATACATCATCTACATT
AATCCCGACGACCTTCTTTAGAGACTACTCCTATCTCTTAAAAGAAGGGT
GTCAAAATATATTATTAATTCCAAAAAATTATCATTACATTCTGACCTAA
TGAATCACCATGGTCATGGATCGCACATATCTGCTTAGTCATGTTTAACA
TAGCTTTATTCCTGTTTTATAACCCAAAATAATTTGAAACCACAGGTGGT
CCTTCATATTGATTAGACCTTTAATTAACTCATAAAAATAATTAATTACT
GAAAATATTTTCTTAGTATATTGTAGTATCATTTATTGTGTTTTAAGCTA
ACATTATACCAAGACCGACCTGGATTCAAATCATTGGGTGTTAAAAGGTT
GTGGGCTGCTATTATAAGTGTTGTTGAACCTGACTGTTTAAAATTGATGC
GAAGACCTTATTATAAATTAATTATTTTCTCTCAAGGTTAACTATGAAAA
GGATTTGGGGTAGTGCTGTTTTGGTCATTGTTTTTGGGATATTTATCATC
TCGATCAAAGATATTCTTCTCAATGTTGAAGAGAACGGGTAAGTCATTTT
TTGTTTACTTTAAAGGGAACAAATTTTTGCAAAATCTTATGAATTTTTAG
CAAATTCTCAAAAGAAAAAGAACTCTGAAAAACTGATTTCTCAAAACATT
CGAAAAATCTCAAAAGGTTATGTAGAGAACTTTCAAATGGGTATAGCTGA
TTTCTTTTTTTAAATAATGCAAGATAATTCAAGTTTAATTATGAATTATT
GCTAAATTTTGGACTGAAATCAACCATGCATCATAACCTTTACTTGAATT
TTCAGTATAATAGTTTCTTTTTATTTGTAGATGTACAATGACCTGGATGT
ATGAATATCCAAAATATATTCCTGTTCCAATGGGTGTAGAGATCAAGAAT
AAGTTTCCAAAGTACAATCTCTTTGTATATGGGGAGGGAGCTTATGCACA
ACATCTTTTTGGTATGCGAGACAATATTCAACTGGATGGTGTCCCTGCTC
TATTTGTTCACGGCAACTCTGGTAGATACAAACAGGTTGGGGTCTTTCTA
AATGCTCTATAATTTTGATGTAAAAATCACTGTAATCTTTTCTATTCGAT
TCTTTTAACCTTTTGAAAATATTTTAGAAATCATACTGTTCTGGATGCTT
GCATGTGTGAAGTTCCTTTTACAGTCCTGTCAACTGTCTTTGCCCATTGA
GGATTCAGAAATATTGTTCTGGATGTCAATTAAGACTTGACAATAAATTC
CTCACATGAAAATAAACAATCTTCGTCAAAAGCATTGAATCCCCACCTTG
GGTCTGTCAGTAGTCCAACAAAATGCTATATTACCTCTTTGAATTTGATT
ATAGGTGCGTTCCCCTGGTTCTGTGTCATTGTCGAAATCCGAACGAAAAG
CATACCATTTCAACTACTTCAGTGTTGATTACGAAGAAGAATTTTCTGCT
TTATTTGGTGAATATCTTCACAAACAAACTTTGTTTCTCTCACATGTCAT
TGATCGTGTTTTTGAATGTTACCAAAGAACTGCAAACAAACCAACCTCTC
TGATTCTTATTGGACATTCAATGGGAGGCATGGTGATTCGTGGTTTGTTT
ACATTACCCCATTTCGACCACAATCAAATTAATACAGTAATCACCTTAGC
AACACCTCATTTGGAACCACCAATCAATCTAGATCCACGCATCAATGAAT
TCTATGATAAAGTTAATAGATATTGGATTGAGCATCAAAATAAAGTCGAG
AATTTGACTTTTTTATCTCTTGGTGGAGGGTTTCGCGATTATCTCGTACG
AAGTGATTTATGTCTCTACAAAAGGTCAAGCCCAAACCATTTTACAACTT
TGACGACATCTTTACCAAGAATCTGGCTATCAAATGACCATCAATGCATC
GTGTGGTGTAATCAGTTGGTAAGAGCCCTCACCAGAACCTTTTTCAACAT
GATTGATCCTAAATCTAAACAAATCACCAACAACCATAAGAAGCGAACCA
AAATTTTGCTGCAAACTTTATTTTATGAGAAACAGAAGCACTTAAGAATC
ACGCTAGATTTCAATGAATGTAGCCCAATTGACTATATTAACAATAAAAT
TACATTAATTCGTAAAAGAGACTGTGTCAAAGTCAATATTTCAGAGAGTG
GACAAATAGTGGATGTTTGGTATCATAGCAACAAAATAGATTCATCTTTG
ATTCGATGTGATCCAAACCAAAAATGCAAAACTTTGAATTTTGCTACCCA
ACTTCCAGACGATTCTCAATTCATTTCAATCAAAACTGAAGCAAAAAATC
AATACTATTTAAACCCTCAGTATGGAGATCTTCATTTTTCAATCGGGAAG
ATATTGGACATTGTGAACAGGATTCAATTACCATTGTTAAATGGTCTGGA
TACTGATGTTTCCTTACCAACATCTTCTTTCTATCATGAAATCAATCTCC
ATGGATACTCTGCTACCTGGCAATGCTTCAAAGTAGAGATTCTAGGTGCT
AAAAAAAAAATAATTGATTCTCCTATCATCAAAATTGAAAACCCTGAGTC
CTCAGAGATTAACGTAAAATCATTTTCAAACAATGAGCTACATAAACTGG
ATTTGAAATTTTTTACGGTACCTACTGATGGAACATTGAAAATGTACATT
TGGAGTCGAAAAGAATTTGCAACAGTTCGAATTAAATTAACAATCGATTG
GGAATCAAGTTTAGGTCAGTTGACACGATTTCAGACACGGTCTATTGCAC
GTTACACACTTGTTTTGTACACCTTTCAAAAATGTAGCCAAAAATCTTCA
GTGCAATCGTTCGCAGTTCTTTTTGCCTTTGCCAAGACTGGACTTTTCAT
ATTAGAACACCATCTAGATGGTATTGGAGTATTACATTACTTTTATCAGA
TTGTCTTTCCAGAAATGTACAGTTTTGTTGTTAGCATGTCTACGGTTTTC
TTATTGGACATTATTGGACAAATCTTATGGAAGGTTGTTAGAGGAATGAC
TTTTAGATACATATCAATTACCAATTCGAGAGCTTTAAAATTAATATGGT
GTTTAATCATTGTATTAATATCTTCAACAATCTATTATTCCTTTGGATCC
GTTTTTGTCCTCATCCCGTGTTTCATAGCCCACCTGATAACAGAATGCGT
TCAGCAATCAAACAAACGATCGGATCTTCTGGCATTTTTACCGACGACGC
TGGCAATATCAATTGTACCTTACATTGTCACTGTCAAGGATGTATTGCTT
GGGTTTCCCATACAATCGATTCGTTTAGGAAATATTGATCCGATAGCACT
GGGTTATGTACTTTATATGATTTCGTTCTCAACTGGATTCCAATTCACTT
TAGCACCACCGAAAATGGTAACTTATGTTTTGCCATTTATATTTGCGCCA
TTTATGTGCAAAGAACTAGTAAACTTTTATAATGTAGGGTATTTAGCCCT
TATTTGTATGGCAATTAAAAGATGTAGTTTTCATAGTGAGGAAAAGTAGA
ATGATTTTAACATTTCAATTTCCTTGTACTACGGTTAATTGATTTTCCTT
AAGGGAACGTTTATTTCCCCTTTCAAAAATCTGCAGCCTAAAGAGGAGGA
GCCAGAAATCTTTTTTCACGTTGTATGTCGAGGGTTTTAACTCGCTAAAT
TGAGAAAGTTCAGCATAAAAAAACACAAGGTTGGCTATATTCCAAACAGA
TAAGTTGCATCTTTTAGGTGTACAAGTTTTTGCATGCAGAAACTTTCGCG
CAGTCGAATTATCCCAAAAGTTTTATATATTTTCG Coding sequence (CDS) from alignment at scaffold_361:112496..121330- >TCONS_00061969 ID=TCONS_00061969|Name=TCONS_00061969|organism=Clytia hemisphaerica|type=CDS|length=7335bp|location=Sequence derived from alignment at scaffold_361:112496..121330- (Clytia hemisphaerica) GTGCGTTCCCCTGGTTCTGTGTCATTGTCGAAATCCGAACGAAAAGCATA CCATTTCAACTACTTCAGTGTTGATTACGAAGAAGAATTTTCTGCTTTAT TTGGTGAATATCTTCACAAACAAACTTTGTTTCTCTCACATGTCATTGAT CGTGTTTTTGAATGTTACCAAAGAACTGCAAACAAACCAACCTCTCTGAT TCTTATTGGACATTCAATGGGAGGCATGGTGATTCGTGGTTTGTTTACAT TACCCCATTTCGACCACAATCAAATTAATACAGTAATCACCTTAGCAACA CCTCATTTGGAACCACCAATCAATCTAGATCCACGCATCAATGAATTCTA TGATAAAGTTAATAGATATTGGATTGAGCATCAAAATAAAGTCGAGAATT TGACTTTTTTATCTCTTGGTGGAGGGTTTCGCGATTATCTCGTACGAAGT GATTTATGTCTCTACAAAAGGTCAAGCCCAAACCATTTTACAACTTTGAC GACATCTTTACCAAGAATCTGGCTATCAAATGACCATCAATGCATCGTGT GGTGTAATCAGTTGGTAAGAGCCCTCACCAGAACCTTTTTCAACATGATT GATCCTAAATCTAAACAAATCACCAACAACCATAAGAAGCGAACCAAAAT TTTGCTGCAAACTTTATTTTATGAGAAACAGAAGCACTTAAGAATCACGC TAGATTTCAATGAATGTAGCCCAATTGACTATATTAACAATAAAATTACA TTAATTCGTAAAAGAGACTGTGTCAAAGTCAATATTTCAGAGAGTGGACA AATAGTGGATGTTTGGTATCATAGCAACAAAATAGATTCATCTTTGATTC GATGTGATCCAAACCAAAAATGCAAAACTTTGAATTTTGCTACCCAACTT CCAGACGATTCTCAATTCATTTCAATCAAAACTGAAGCAAAAAATCAATA CTATTTAAACCCTCAGTATGGAGATCTTCATTTTTCAATCGGGAAGATAT TGGACATTGTGAACAGGATTCAATTACCATTGTTAAATGGTCTGGATACT GATGTTTCCTTACCAACATCTTCTTTCTATCATGAAATCAATCTCCATGG ATACTCTGCTACCTGGCAATGCTTCAAAGTAGAGATTCTAGGTGCTAAAA AAAAAATAATTGATTCTCCTATCATCAAAATTGAAAACCCTGAGTCCTCA GAGATTAACGTAAAATCATTTTCAAACAATGAGCTACATAAACTGGATTT GAAATTTTTTACGGTACCTACTGATGGAACATTGAAAATGTACATTTGGA GTCGAAAAGAATTTGCAACAGTTCGAATTAAATTAACAATCGATTGGGAA TCAAGTTTAGGTCAGTTGACACGATTTCAGACACGGTCTATTGCACGTTA CACACTTGTTTTGTACACCTTTCAAAAATGTAGCCAAAAATCTTCAGTGC AATCGTTCGCAGTTCTTTTTGCCTTTGCCAAGACTGGACTTTTCATATTA GAACACCATCTAGATGGTATTGGAGTATTACATTACTTTTATCAGATTGT CTTTCCAGAAATGTACAGTTTTGTTGTTAGCATGTCTACGGTTTTCTTAT TGGACATTATTGGACAAATCTTATGGAAGGTTGTTAGAGGAATGACTTTT AGATACATATCAATTACCAATTCGAGAGCTTTAAAATTAATATGGTGTTT AATCATTGTATTAATATCTTCAACAATCTATTATTCCTTTGGATCCGTTT TTGTCCTCATCCCGTGTTTCATAGCCCACCTGATAACAGAATGCGTTCAG CAATCAAACAAACGATCGGATCTTCTGGCATTTTTACCGACGACGCTGGC AATATCAATTGTACCTTACATTGTCACTGTCAAGGATGTATTGCTTGGGT TTCCCATACAATCGATTCGTTTAGGAAATATTGATCCGATAGCACTGGGT TATGTACTTTATATGATTTCGTTCTCAACTGGATTCCAATTCACTTTAGC ACCACCGAAAATGGTAACTTATGTTTTGCCATTTATATTTGCGCCATTTA TGTGCAAAGAACTAGTAAACTTTTATAATGTAGGGTATTTAGCCCTTATT TGTATGGCAATTAAAAGATGTAGTTTTCATAGTGAGGAAAAGTAGATGTA CAATGACCTGGATGTATGAATATCCAAAATATATTCCTGTTCCAATGGGT GTAGAGATCAAGAATAAGTTTCCAAAGTACAATCTCTTTGTATATGGGGA GGGAGCTTATGCACAACATCTTTTTGGTATGCGAGACAATATTCAACTGG ATGGTGTCCCTGCTCTATTTGTTCACGGCAACTCTGGTAGATACAAACAG ATGAAAAGGATTTGGGGTAGTGCTGTTTTGGTCATTGTTTTTGGGATATT TATCATCTCGATCAAAGATATTCTTCTCAATGTTGAAGAGAACGGGTGCG TTCCCCTGGTTCTGTGTCATTGTCGAAATCCGAACGAAAAGCATACCATT TCAACTACTTCAGTGTTGATTACGAAGAAGAATTTTCTGCTTTATTTGGT GAATATCTTCACAAACAAACTTTGTTTCTCTCACATGTCATTGATCGTGT TTTTGAATGTTACCAAAGAACTGCAAACAAACCAACCTCTCTGATTCTTA TTGGACATTCAATGGGAGGCATGGTGATTCGTGGTTTGTTTACATTACCC CATTTCGACCACAATCAAATTAATACAGTAATCACCTTAGCAACACCTCA TTTGGAACCACCAATCAATCTAGATCCACGCATCAATGAATTCTATGATA AAGTTAATAGATATTGGATTGAGCATCAAAATAAAGTCGAGAATTTGACT TTTTTATCTCTTGGTGGAGGGTTTCGCGATTATCTCGTACGAAGTGATTT ATGTCTCTACAAAAGGTCAAGCCCAAACCATTTTACAACTTTGACGACAT CTTTACCAAGAATCTGGCTATCAAATGACCATCAATGCATCGTGTGGTGT AATCAGTTGGTAAGAGCCCTCACCAGAACCTTTTTCAACATGATTGATCC TAAATCTAAACAAATCACCAACAACCATAAGAAGCGAACCAAAATTTTGC TGCAAACTTTATTTTATGAGAAACAGAAGCACTTAAGAATCACGCTAGAT TTCAATGAATGTAGCCCAATTGACTATATTAACAATAAAATTACATTAAT TCGTAAAAGAGACTGTGTCAAAGTCAATATTTCAGAGAGTGGACAAATAG TGGATGTTTGGTATCATAGCAACAAAATAGATTCATCTTTGATTCGATGT GATCCAAACCAAAAATGCAAAACTTTGAATTTTGCTACCCAACTTCCAGA CGATTCTCAATTCATTTCAATCAAAACTGAAGCAAAAAATCAATACTATT TAAACCCTCAGTATGGAGATCTTCATTTTTCAATCGGGAAGATATTGGAC ATTGTGAACAGGATTCAATTACCATTGTTAAATGGTCTGGATACTGATGT TTCCTTACCAACATCTTCTTTCTATCATGAAATCAATCTCCATGGATACT CTGCTACCTGGCAATGCTTCAAAGTAGAGATTCTAGGTGCTAAAAAAAAA ATAATTGATTCTCCTATCATCAAAATTGAAAACCCTGAGTCCTCAGAGAT TAACGTAAAATCATTTTCAAACAATGAGCTACATAAACTGGATTTGAAAT TTTTTACGGTACCTACTGATGGAACATTGAAAATGTACATTTGGAGTCGA AAAGAATTTGCAACAGTTCGAATTAAATTAACAATCGATTGGGAATCAAG TTTAGGTCAGTTGACACGATTTCAGACACGGTCTATTGCACGTTACACAC TTGTTTTGTACACCTTTCAAAAATGTAGCCAAAAATCTTCAGTGCAATCG TTCGCAGTTCTTTTTGCCTTTGCCAAGACTGGACTTTTCATATTAGAACA CCATCTAGATGGTATTGGAGTATTACATTACTTTTATCAGATTGTCTTTC CAGAAATGTACAGTTTTGTTGTTAGCATGTCTACGGTTTTCTTATTGGAC ATTATTGGACAAATCTTATGGAAGGTTGTTAGAGGAATGACTTTTAGATA CATATCAATTACCAATTCGAGAGCTTTAAAATTAATATGGTGTTTAATCA TTGTATTAATATCTTCAACAATCTATTATTCCTTTGGATCCGTTTTTGTC CTCATCCCGTGTTTCATAGCCCACCTGATAACAGAATGCGTTCAGCAATC AAACAAACGATCGGATCTTCTGGCATTTTTACCGACGACGCTGGCAATAT CAATTGTACCTTACATTGTCACTGTCAAGGATGTATTGCTTGGGTTTCCC ATACAATCGATTCGTTTAGGAAATATTGATCCGATAGCACTGGGTTATGT ACTTTATATGATTTCGTTCTCAACTGGATTCCAATTCACTTTAGCACCAC CGAAAATGGTAACTTATGTTTTGCCATTTATATTTGCGCCATTTATGTGC AAAGAACTAGTAAACTTTTATAATGTAGGGTATTTAGCCCTTATTTGTAT GGCAATTAAAAGATGTAGTTTTCATAGTGAGGAAAAGTAGATGTACAATG ACCTGGATGTATGAATATCCAAAATATATTCCTGTTCCAATGGGTGTAGA GATCAAGAATAAGTTTCCAAAGTACAATCTCTTTGTATATGGGGAGGGAG CTTATGCACAACATCTTTTTGGTATGCGAGACAATATTCAACTGGATGGT GTCCCTGCTCTATTTGTTCACGGCAACTCTGGTAGATACAAACAGATGAA AAGGATTTGGGGTAGTGCTGTTTTGGTCATTGTTTTTGGGATATTTATCA TCTCGATCAAAGATATTCTTCTCAATGTTGAAGAGAACGGGTGCGTTCCC CTGGTTCTGTGTCATTGTCGAAATCCGAACGAAAAGCATACCATTTCAAC TACTTCAGTGTTGATTACGAAGAAGAATTTTCTGCTTTATTTGGTGAATA TCTTCACAAACAAACTTTGTTTCTCTCACATGTCATTGATCGTGTTTTTG AATGTTACCAAAGAACTGCAAACAAACCAACCTCTCTGATTCTTATTGGA CATTCAATGGGAGGCATGGTGATTCGTGGTTTGTTTACATTACCCCATTT CGACCACAATCAAATTAATACAGTAATCACCTTAGCAACACCTCATTTGG AACCACCAATCAATCTAGATCCACGCATCAATGAATTCTATGATAAAGTT AATAGATATTGGATTGAGCATCAAAATAAAGTCGAGAATTTGACTTTTTT ATCTCTTGGTGGAGGGTTTCGCGATTATCTCGTACGAAGTGATTTATGTC TCTACAAAAGGTCAAGCCCAAACCATTTTACAACTTTGACGACATCTTTA CCAAGAATCTGGCTATCAAATGACCATCAATGCATCGTGTGGTGTAATCA GTTGGTAAGAGCCCTCACCAGAACCTTTTTCAACATGATTGATCCTAAAT CTAAACAAATCACCAACAACCATAAGAAGCGAACCAAAATTTTGCTGCAA ACTTTATTTTATGAGAAACAGAAGCACTTAAGAATCACGCTAGATTTCAA TGAATGTAGCCCAATTGACTATATTAACAATAAAATTACATTAATTCGTA AAAGAGACTGTGTCAAAGTCAATATTTCAGAGAGTGGACAAATAGTGGAT GTTTGGTATCATAGCAACAAAATAGATTCATCTTTGATTCGATGTGATCC AAACCAAAAATGCAAAACTTTGAATTTTGCTACCCAACTTCCAGACGATT CTCAATTCATTTCAATCAAAACTGAAGCAAAAAATCAATACTATTTAAAC CCTCAGTATGGAGATCTTCATTTTTCAATCGGGAAGATATTGGACATTGT GAACAGGATTCAATTACCATTGTTAAATGGTCTGGATACTGATGTTTCCT TACCAACATCTTCTTTCTATCATGAAATCAATCTCCATGGATACTCTGCT ACCTGGCAATGCTTCAAAGTAGAGATTCTAGGTGCTAAAAAAAAAATAAT TGATTCTCCTATCATCAAAATTGAAAACCCTGAGTCCTCAGAGATTAACG TAAAATCATTTTCAAACAATGAGCTACATAAACTGGATTTGAAATTTTTT ACGGTACCTACTGATGGAACATTGAAAATGTACATTTGGAGTCGAAAAGA ATTTGCAACAGTTCGAATTAAATTAACAATCGATTGGGAATCAAGTTTAG GTCAGTTGACACGATTTCAGACACGGTCTATTGCACGTTACACACTTGTT TTGTACACCTTTCAAAAATGTAGCCAAAAATCTTCAGTGCAATCGTTCGC AGTTCTTTTTGCCTTTGCCAAGACTGGACTTTTCATATTAGAACACCATC TAGATGGTATTGGAGTATTACATTACTTTTATCAGATTGTCTTTCCAGAA ATGTACAGTTTTGTTGTTAGCATGTCTACGGTTTTCTTATTGGACATTAT TGGACAAATCTTATGGAAGGTTGTTAGAGGAATGACTTTTAGATACATAT CAATTACCAATTCGAGAGCTTTAAAATTAATATGGTGTTTAATCATTGTA TTAATATCTTCAACAATCTATTATTCCTTTGGATCCGTTTTTGTCCTCAT CCCGTGTTTCATAGCCCACCTGATAACAGAATGCGTTCAGCAATCAAACA AACGATCGGATCTTCTGGCATTTTTACCGACGACGCTGGCAATATCAATT GTACCTTACATTGTCACTGTCAAGGATGTATTGCTTGGGTTTCCCATACA ATCGATTCGTTTAGGAAATATTGATCCGATAGCACTGGGTTATGTACTTT ATATGATTTCGTTCTCAACTGGATTCCAATTCACTTTAGCACCACCGAAA ATGGTAACTTATGTTTTGCCATTTATATTTGCGCCATTTATGTGCAAAGA ACTAGTAAACTTTTATAATGTAGGGTATTTAGCCCTTATTTGTATGGCAA TTAAAAGATGTAGTTTTCATAGTGAGGAAAAGTAGATGTACAATGACCTG GATGTATGAATATCCAAAATATATTCCTGTTCCAATGGGTGTAGAGATCA AGAATAAGTTTCCAAAGTACAATCTCTTTGTATATGGGGAGGGAGCTTAT GCACAACATCTTTTTGGTATGCGAGACAATATTCAACTGGATGGTGTCCC TGCTCTATTTGTTCACGGCAACTCTGGTAGATACAAACAGATGAAAAGGA TTTGGGGTAGTGCTGTTTTGGTCATTGTTTTTGGGATATTTATCATCTCG ATCAAAGATATTCTTCTCAATGTTGAAGAGAACGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00061969-exon-scaffold_361-1575043694:121282..121330 | TCONS_00061969-exon-scaffold_361-1575043694:121282..121330 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1575043694:115743..115844 | TCONS_00061969-exon-scaffold_361-1575043694:115743..115844 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1575043694:115246..115450 | TCONS_00061969-exon-scaffold_361-1575043694:115246..115450 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1575043694:112496..114926 | TCONS_00061969-exon-scaffold_361-1575043694:112496..114926 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1510915933:121282..121330 | TCONS_00061969-exon-scaffold_361-1510915933:121282..121330 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1510915933:115743..115844 | TCONS_00061969-exon-scaffold_361-1510915933:115743..115844 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1510915933:115246..115450 | TCONS_00061969-exon-scaffold_361-1510915933:115246..115450 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1510915933:112496..114926 | TCONS_00061969-exon-scaffold_361-1510915933:112496..114926 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1491911889:121282..121330 | TCONS_00061969-exon-scaffold_361-1491911889:121282..121330 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1491911889:115743..115844 | TCONS_00061969-exon-scaffold_361-1491911889:115743..115844 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1491911889:115246..115450 | TCONS_00061969-exon-scaffold_361-1491911889:115246..115450 | Clytia hemisphaerica | exon |
TCONS_00061969-exon-scaffold_361-1491911889:112496..114926 | TCONS_00061969-exon-scaffold_361-1491911889:112496..114926 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_361 | supercontig | scaffold_361:112496..121330 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0016788 | hydrolase activity, acting on ester bonds |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
Blast
BLAST of TCONS_00061969 vs. Swiss-Prot (Human)
Match: PGAP1 (GPI inositol-deacylase OS=Homo sapiens GN=PGAP1 PE=1 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 4.121e-78 Identity = 137/332 (41.27%), Postives = 201/332 (60.54%), Query Frame = 3
Query: 66 IWGSAVLVIVFGIFIISIKDILLNVEENGCTMTWMYEYPKYIPVPMGVEIKNKFPKYNLFVYGEGAYAQHLFGMRDNIQLDGVPALFVHGNSGRYKQVRSPGSVSLSKSERK--AYHFNYFSVDYEEEFSALFGEYLHKQTLFLSHVIDRVFECYQRTANKPTSLILIGHSMGGMVIRGLFTLPHFDHNQINTVITLATPHLEPPINLDPRINEFYDKVNRYWIEHQNKVENLTFLSLGGGFRDYLVRSDLCLYKRSS--PNHFTTLTTSLPRIWLSNDHQCIVWCNQLVRALTRTFFNMIDPKSKQITNNHKKRTKILLQTLFYEKQKHLR 1049
+W A V + + + + D+ EEN C+M++M+EYP+Y + + ++ ++P Y L++YGEG+YA+ + L G+P LF+ GN+G YKQVRS GS++L K+E YHF++FSV++ EE AL+G L KQT F+ I + + Y+ P S+ +IGHSMGG+V R L TL +F H+ IN +IT ATPH+ P + LD I +FY VN YWI + + NLT LS+ GGFRDY VRS L + S + + +++++P+ W+S DH IVWC QL R FF++ID +KQIT N KK+ +L KH
Sbjct: 8 LWNLAFYVFMVFLATLGLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLAKRYPAYELYLYGEGSYAEE----HKILPLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYHFDFFSVNFNEELVALYGGSLQKQTKFVHECIKTILKLYKGQEFAPKSVAIIGHSMGGLVARALLTLKNFKHDLINLLITQATPHVAPVMPLDRFITDFYTTVNNYWILNARHI-NLTTLSVAGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTVRAFFDLIDADTKQITQNSKKKLSVLYHHFIRHPSKHFE 334
The following BLAST results are available for this feature:
|