TCONS_00062011 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062011
Unique NameTCONS_00062011
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062011 ID=TCONS_00062011|Name=TCONS_00062011|organism=Clytia hemisphaerica|type=transcript|length=4635bp
gacactatggtgTAAAGCaaaatgcgcgaaaattaacaaatctcaaattt
aaaatgaaaatgacttaAAACGAAGACAAATggcatttacatttttttct
ttagcctttagaaaatttttgtctacgagttaaaattttgatctgtgcat
ttttttataatcaagtCAAACATTTTTCCACTCTGTGTAAATGCAACGGG
TGTTTTtttgtcactttcgtttttgaccTGTTGCATTTGCTGCATGTCGA
ACcctgtgcaaatgcaaggatttccgtGACTGTCTAAAGGATCACCACCA
TCAGGAAAAAGTAAACTggcacttttttttaaagaagttaacattttcaa
aaactgaagttaaaatttgagccgtatataagaaattttgatcagagcca
accttgaaaactaattgtTGTTCGGGAGAACGCAACGGTCtcttgaataa
ctaattactccagcaAAAcccaccaaaaatatttttaatgataATGTCAT
ATATATGATTGTTTTGTCCTTCATAACACAGCAGTTACCTAGGGCCACGA
TAATTTATCACATTTATACTGACTGGGGGAGAGTAATCTaggtggagtaa
ttagttactGTTGATCATTGCGCTCTCCTAAACTACtaatttgaagaaca
acttgccaagtaactaactaactaacctATTTACGTGTGtggaattattt
ttcatttttacttaAGCCTGTAATCAAGGCCTAACAAATCAAAGAGCTAT
CTTAggaattgaataacaaattttggttggtttgttagctggctgctgca
cgttGTTAATCTGTCATTTTGGGTTGtttcaagttttcaagttttaatta
attgtcttgggatcttgaacttgattaGGCAACTCTTATCCtcgttgttg
caaatacatcctgtagatgactgttgttttttttgaaagcttgatttccc
agtgtgactaactgacttaTCCGTTCACTTGTATCTGATTTTCCAATGAC
GTATTGGTGGGTATTTGCGGCTACCCACGCTAATGCTCTAAAGGAGTGGG
CCAAATTAATTGTAATCAATCTTGTCAAACAATATTGCATCACAATCAAA
CGTAATTGAGAATCAATTTAACAAATAGAACGTTGttcaaacacaatcaa
atattaTCCAgtaatcggccgttcgattgttTCTATTGTGTtgtgatttt
tgttttttgaacttgtttgattgacaatGTCTGGATAGATAATATAATCC
ATATCTATCTATAAATTTAAGTGACATCAGGCCCGAAGGCCCATTCTCGC
TACATAATACACTTCCCATATTTTGCAAAACGGTTACTAGTGCATATTTT
GTTGCTCTCCACAGTTTGGTCTCTGGGAGAAACCCGTTTTTTGCCTGTGT
TTCCTtggggaaagttggttttttgaaattttcttaagttctgtcaaaCA
GAATCCTCTCAAATTTTAATTATGTTTTTTCTATTTATgctattatacca
ccctgaaaattttgaagacaTTGATATATATCAAGACAATGATAATGATA
ACATAACATTTGAATTGGTGCACACACttataattaaaattcaattgtCA
GTTTAAAGCCTGACCTCTTCAAATCCTCGGTTAGGAAAAGCTGTACCTGT
TTTTCCTGGAGGTACTGGAACGTTCCAGGAACACTATGGAATGTTCAGGA
ACTTCTCAAAAATCTCCCAATCAAGGTTCTCCCAATAGATGTATGCTTTC
ATTATAATTTCCaaattattttctcaaaaatgtttaattttattATCATG
TAGGTCCATAAGAATAAAGCTTgtttacttttaaaagattttactaGGCA
TGGAAGTATTTGAAAACCCAGctattttttatttatcaatTGATGAACCA
ATTATCCCAAACATTttggaagatttgaaaaaaggtGGCTTCAATGAGAA
TGTGCAATGTATAGAGCTGAGCGAAGATGAATTAGAAAGAGCTCAAACAG
AAATATGCAATGACTTGACAACAccctttattttgttttgtgcAGAAGGG
AAAGTAAACTGGAAACGTATTGGAAAAATAGCAGGTATCTCATTTGGAGT
AGGACTTGCATCTGTTGTAGCTGCACCCCTTGTTCTCACAGCAGCAGGAT
TTACATCAGGAGGTGTTGCTTCAGGAAGTGCTGCTGCAGCTGCTCAAAGT
GCATTTTATGGAGGTGCAACTGGTGGAATTTTTTCTATACTTCAAAGTGC
TGGAGCTGTTGGCATTGGAATTTTTGGGAATACTGCTATTGGTTTAGCAG
GTGCTAGCGCTGGTGCAGGTTTAGCAGCAGCTGCAGGAGCTGGTGCAAAT
GAAACAGCTTTAGTTAGAAAACCTGCTGTGATTGGTATACTTTCTAGGTG
GGCTAGAAATAACAATAATGTTAAAAATgaagacaaaaagaaaattaaaa
cttttacaGATAAGAAGTTGGGAATTAAAGAAGATCCAAATTATGTACCT
TGGAGTATTATGGCCAAGAATTTGTTTCAAACAGCAATAGGGTCTCTTGA
AGCTTTGAAACCAACAGTTTTGGTATATTTTAAAGATAGTTATATTAAAC
TCGAGTGAGTTACGGCACGTCCAACTTTTCTGTGAGCCAATGCAAACAAA
TCGCACTAGTTTAGGGGTACTATGttatacatcaaaagaagcttATTCCA
ATGTACATTAACGAAATTGCTGTCAgtgttgaatttttttgtaaagaaaa
atgaTTCTTTTAATGAAGTTTCTATTTATTAGATACTCAAAGAGTagctc
ataatttttttaaatccagAAATAGAGAAATTAGAGAACTAGAGGAATTC
TTGAATTGCTAAATCTGATCCTAGATAAAAAGCATAATgtgttactttca
ctttcagatGATTTTGCATCACCTTGTTGAACTTTTGACACCCAGGAGAG
GGGGAGACGTTTTCTAGTGTCATTTTTAAAgtcaattcaaagaaaattat
tatatacattttattATAGAGCATGATCctaaattattataaatttataT
TTATGGTAGCCTAACTATTTACTAAATATTTTTACAGATAGATTTTTAAC
TCAGATTTATTTCGTATATAAGGGTACCCTTTCACAATTTAAGATGTTTT
TACTATGAAATCTTTAAGTTTTTACACTTATCGAGAAAAGTGAACTTAGT
ACTTGCGTGTTAAAGTTATAAAGTAATaactcaatttttattttaatact
GTATTCTCAAGCAGTGTAGGACACTTGTTACTTTGCAAGACCTCAAGAAA
CTGACAGAATTTGTTTGTGGGTCGAatcatatttttgtatttttaataat
NATgaagacaaaaagaaaattaaaacttttacaGATAAGAAGTTGGGAAT
TAAAGAAGATCCAAATTATGTACCTTGGAGTATTATGGCCAAGGATTTGT
TTCAAACAGCAATAGGGTCTCTTGAAGCTTTGAAACCAACAGTTTTGGTA
TATTTTAAAGATAGTTATATTAAACTCGAGTGAGTTCTGGCACGTCCAAC
TTTTCTGTGAGCCAATGCAAACAAATCGCACTAGTTTAGGGGTACTATGt
tatacatcaaaagaagcttATTCCAATGTACATTAACGAAATTGCTGTCA
gtgttgaatttttttgtaaagaaaaatgaTTCTTTTAATGAAGTTTCTAT
TTATTAGATACTCAAAGAGTagctcataatttttttaaatccagAAATAG
AGAAATTAGAGAACTAGAGGAATTCTTGAATTGCTAAATCTGATCCTAGA
TAAAAAGCATAATgtgttactttcactttcagatGATTTTGCATCACCTT
GTTGAACTTTTGACACCCAGGAGAGGGGGAGACGTTTTCTAGTGTCATTT
TTAAAgtcaattcaaagaaaattattatatacattttattATAGAGCATG
ATCctaaattattataaatttataTTTATGGTAGCCTAACTATTTACTAA
ATATTTTTACAGATAGATTTTTAACTCAGATTTATTTCGTATATAAGGGT
ACCCTTTCACAATTTAAGATGTTTTTACTATGAAATCTTTAAGTTTTTAC
ACTTATCGAGAAAAGTGAACTTAGTACTTGCGTGTTAAAGTTATAAAGTA
ATaactcaatttttattttaatactGTATTCTCAAGCAGTGTAGGACACT
TGTTACTTTGCAAGACCTCAAGAAACTGACAGAATTTGTTTGTGGGTCGA
atcatatttttgtatttttaataatttatatTATAATGATATTAAATCTT
TAATCTTATTGTGCATGGAAATTAAGAttgtcttttttattatttaggTT
AAATAACAACCTTTAAATGCATTAAAATAGACAAGGGCGTAGATAAAAGG
ACTGGTTGCCAAGAAGGTGTATTATgggaaatgtttattttgtcACCATT
CAATACAATGATATTACTTTTTATTATAGTGTAGTGACAAtatcaaaatg
atgaaaaatagatCAATTACATTCATTTTCATGTTATTGCTCATCACAGG
ACCAGCCATGGCTGAAATAAAGGACACaagtaccgggtgacccacgaaaa
agttcggacgtttctcggcgtcttgaggccgaaaa
Run BLAST on NCBI

protein sequence of TCONS_00062011-protein

>TCONS_00062011-protein ID=TCONS_00062011-protein|Name=TCONS_00062011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
MEVFENPAIFYLSIDEPIIPNILEDLKKGGFNENVQCIELSEDELERAQT
EICNDLTTPFILFCAEGKVNWKRIGKIAGISFGVGLASVVAAPLVLTAAG
FTSGGVASGSAAAAAQSAFYGGATGGIFSILQSAGAVGIGIFGNTAIGLA
GASAGAGLAAAAGAGANETALVRKPAVIGILSRWARNNNNVKNEDKKKIK
TFTDKKLGIKEDPNYVPWSIMAKNLFQTAIGSLEALKPTVLVYFKDSYIK
LE
Run BLAST on NCBI

transcript from alignment at scaffold_361:731569..737597-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062011 ID=TCONS_00062011|Name=TCONS_00062011|organism=Clytia hemisphaerica|type=transcript|length=6029bp|location=Sequence derived from alignment at scaffold_361:731569..737597- (Clytia hemisphaerica)
GACACTATGGTGTAAAGCAAAATGCGCGAAAATTAACAAATCTCAAATTT AAAATGAAAATGACTTAAAACGAAGACAAATGGCATTTACATTTTTTTCT TTAGCCTTTAGAAAATTTTTGTCTACGAGTTAAAATTTTGATCTGTGCAT TTTTTTATAATCAAGTCAAACATTTTTCCACTCTGTGTAAATGCAACGGG TGTTTTTTTGTCACTTTCGTTTTTGACCTGTTGCATTTGCTGCATGTCGA ACCCTGTGCAAATGCAAGGATTTCCGTGACTGTCTAAAGGATCACCACCA TCAGGAAAAAGTAAACTGGCACTTTTTTTTAAAGAAGTTAACATTTTCAA AAACTGAAGTTAAAATTTGAGCCGTATATAAGAAATTTTGATCAGAGCCA ACCTTGAAAACTAATTGTTGTTCGGGAGAACGCAACGGTCTCTTGAATAA CTAATTACTCCAGCAAAACCCACCAAAAATATTTTTAATGATAATGTCAT ATATATGATTGTTTTGTCCTTCATAACACAGCAGTTACCTAGGGCCACGA TAATTTATCACATTTATACTGACTGGGGGAGAGTAATCTAGGTGGAGTAA TTAGTTACTGTTGATCATTGCGCTCTCCTAAACTACTAATTTGAAGAACA ACTTGCCAAGTAACTAACTAACTAACCTATTTACGTGTGTGGAATTATTT TTCATTTTTACTTAAGCCTGTAATCAAGGCCTAACAAATCAAAGAGCTAT CTTAGGAATTGAATAACAAATTTTGGTTGGTTTGTTAGCTGGCTGCTGCA CGTTGTTAATCTGTCATTTTGGGTTGTTTCAAGTTTTCAAGTTTTAATTA ATTGTCTTGGGATCTTGAACTTGATTAGGCAACTCTTATCCTCGTTGTTG CAAATACATCCTGTAGATGACTGTTGTTTTTTTTGAAAGCTTGATTTCCC AGTGTGACTAACTGACTTATCCGTTCACTTGTATCTGATTTTCCAATGAC GTATTGGTGGGTATTTGCGGCTACCCACGCTAATGCTCTAAAGGAGTGGG CCAAATTAATTGTAATCAATCTTGTCAAACAATATTGCATCACAATCAAA CGTAATTGAGAATCAATTTAACAAATAGAACGTTGTTCAAACACAATCAA ATATTATCCAGTAATCGGCCGTTCGATTGTTTCTATTGTGTTGTGATTTT TGTTTTTTGAACTTGTTTGATTGACAATGTCTGGATAGATAATATAATCC ATATCTATCTATAAATTTAAGTGACATCAGGCCCGAAGGCCCATTCTCGC TACATAATACACTTCCCATATTTTGCAAAACGGTTACTAGTGCATATTTT GTTGCTCTCCACAGTTTGGTCTCTGGGAGAAACCCGTTTTTTGCCTGTGT TTCCTTGGGGAAAGTTGGTTTTTTGAAATTTTCTTAAGTTCTGTCAAACA GAATCCTCTCAAATTTTAATTATGTTTTTTCTATTTATGCTATTATACCA CCCTGAAAATTTTGAAGACATTGATATATATCAAGACAATGATAATGATA ACATAACATTTGAATTGGTGCACACACTTATAATTAAAATTCAATTGTCA GTTTAAAGCCTGACCTCTTCAAATCCTCGGTTAGGAAAAGCTGTACCTGT TTTTCCTGGAGGTACTGGAACGTTCCAGGAACACTATGGAATGTTCAGGA ACTTCTCAAAAATCTCCCAATCAAGGTTCTCCCAATAGATGTATGCTTTC ATTATAATTTCCAAATTATTTTCTCAAAAATGTTTAATTTTATTATCATG TAGGTCCATAAGAATAAAGCTTGTTTACTTTTAAAAGATTTTACTAGGCA TGGAAGTATTTGAAAACCCAGCTATTTTTTATTTATCAATTGATGAACCA ATTATCCCAAACATTTTGGAAGATTTGAAAAAAGGTGGCTTCAATGAGAA TGTGCAATGTATAGAGCTGAGCGAAGATGAATTAGAAAGAGCTCAAACAG AAATATGCAATGACTTGACAACACCCTTTATTTTGTTTTGTGCAGAAGGG AAAGTAAACTGTAAGTAAATATTTCGGAAATTTTTTCTTTAGTATTAGTA TAGTTATGCTTTGAACACTGTCTTATGTTCAATGACGTTTTGTTTTTACT TTGCCGAATCGTGACAGTGCAATAAAAAGCAAAAGGTTTATTTCAGATCA ACAATAATTATCTTATAAATAAATAAATTGATGAAATTATACATAAAAGA CTAACTATCACCTATGCCAACTGCATTATTTCCTTGTTGATTTTGGTCCT TTTTAGGGAAACGTATTGGAAAAATAGCAGGTATCTCATTTGGAGTAGGA CTTGCATCTGTTGTAGCTGCACCCCTTGTTCTCACAGCAGCAGGATTTAC ATCAGGAGGTATTGATTCTGGTTTTTTGTTGTTTTGTTTTCTTATGGTTT GATAGAGCCAAATTTTAACTTCTTCGTTGAATTTGTTATTCCAGCTTTCC AGAATGAGAGATTTTCTGTGACGTGCTATTTCAGTTTTTAGAGTAAATAA ATTCAAATCAAGTTATTTATATTGAAAAAGTATTTTATTAAAAAGGTAAA CTTATTTTGCTAGGTGTTGCTTCAGGAAGTGCTGCTGCAGCTGCTCAAAG TGCATTTTATGGAGGTGCAACTGGTGGAATTTTTTCTATACTTCAAAGTG CTGGAGCTGTTGGCATTGGAATTTTTGGGAATACTGCTATTGGTTTAGCA GGTGCTAGCGCTGGTGCAGGTTTAGCAGCAGCTGCAGGAGCTGGTGCAAA TGAAACAGCTTTAGTTAGAAAACCTGCTGTGATTGGTATACTTTCTAGGT GGGCTAGAAATAACAATAATGTTAAAAATGAAGACAAAAAGAAAATTAAA ACTTTTACAGATAAGAAGTTGGGAATTAAAGAAGATCCAAATTATGTACC TTGGAGTATTATGGCCAAGAATTTGTTTCAAACAGCAATAGGGTCTCTTG AAGCTTTGAAACCAACAGTTTTGGTATATTTTAAAGATAGTTATATTAAA CTCGAGTGAGTTACGGCACGTCCAACTTTTCTGTGAGCCAATGCAAACAA ATCGCACTAGTTTAGGGGTACTATGTTATACATCAAAAGAAGCTTATTCC AATGTACATTAACGAAATTGCTGTCAGTGTTGAATTTTTTTGTAAAGAAA AATGATTCTTTTAATGAAGTTTCTATTTATTAGATACTCAAAGAGTAGCT CATAATTTTTTTAAATCCAGAAATAGAGAAATTAGAGAACTAGAGGAATT CTTGAATTGCTAAATCTGATCCTAGATAAAAAGCATAATGTGTTACTTTC ACTTTCAGATGATTTTGCATCACCTTGTTGAACTTTTGACACCCAGGAGA GGGGGAGACGTTTTCTAGTGTCATTTTTAAAGTCAATTCAAAGAAAATTA TTATATACATTTTATTATAGAGCATGATCCTAAATTATTATAAATTTATA TTTATGGTAGCCTAACTATTTACTAAATATTTTTACAGATAGATTTTTAA CTCAGATTTATTTCGTATATAAGGGTACCCTTTCACAATTTAAGATGTTT TTACTATGAAATCTTTAAGTTTTTACACTTATCGAGAAAAGTGAACTTAG TACTTGCGTGTTAAAGTTATAAAGTAATAACTCAATTTTTATTTTAATAC TGTATTCTCAAGCAGTGTAGGACACTTGTTACTTTGCAAGACCTCAAGAA ACTGACAGAATTTGTTTGTGGGTCGAATCATATTTTTGTATTTTTAATAA TNATGAAGACAAAAAGAAAATTAAAACTTTTACAGATAAGAAGTTGGGAA TTAAAGAAGATCCAAATTATGTACCTTGGAGTATTATGGCCAAGGATTTG TTTCAAACAGCAATAGGGTCTCTTGAAGCTTTGAAACCAACAGTTTTGGT ATATTTTAAAGATAGTTATATTAAACTCGAGTGAGTTCTGGCACGTCCAA CTTTTCTGTGAGCCAATGCAAACAAATCGCACTAGTTTAGGGGTACTATG TTATACATCAAAAGAAGCTTATTCCAATGTACATTAACGAAATTGCTGTC AGTGTTGAATTTTTTTGTAAAGAAAAATGATTCTTTTAATGAAGTTTCTA TTTATTAGATACTCAAAGAGTAGCTCATAATTTTTTTAAATCCAGAAATA GAGAAATTAGAGAACTAGAGGAATTCTTGAATTGCTAAATCTGATCCTAG ATAAAAAGCATAATGTGTTACTTTCACTTTCAGATGATTTTGCATCACCT TGTTGAACTTTTGACACCCAGGAGAGGGGGAGACGTTTTCTAGTGTCATT TTTAAAGTCAATTCAAAGAAAATTATTATATACATTTTATTATAGAGCAT GATCCTAAATTATTATAAATTTATATTTATGGTAGCCTAACTATTTACTA AATATTTTTACAGATAGATTTTTAACTCAGATTTATTTCGTATATAAGGG TACCCTTTCACAATTTAAGATGTTTTTACTATGAAATCTTTAAGTTTTTA CACTTATCGAGAAAAGTGAACTTAGTACTTGCGTGTTAAAGTTATAAAGT AATAACTCAATTTTTATTTTAATACTGTATTCTCAAGCAGTGTAGGACAC TTGTTACTTTGCAAGACCTCAAGAAACTGACAGAATTTGTTTGTGGGTCG AATCATATTTTTGTATTTTTAATAATTTATATTATAATGATATTAAATCT TTAATCTTATTGTGCATGGAAATTAAGATTGTCTTTTTTATTATTTAGGT TAAATAACAACCTTTAAATGCATTAAAATAGACAAGGGCGTAGATAAAAG GACTGGTTGCCAAGAAGGTGTATTATGGGAAATGTTTATTTTGTCACCAT TCAATACAATGATATTACTTTTTATTATAGTGTAGTGACAATATCAAAAT GATGAAAAATAGATCAATTACATTCATTTTCATGTTATTGCTCATCACAG GACCAGGTATTTTGCTTTCTTTTTGTTACAGTATATGGCCCCTAAAACGT CGTTCAAACTTAAGATTTCTCTCAAATGCAGAGGAAAAGAAGTTTTACAA AGATTTTTGCTGCATGCAAAACTTTAACATCTCTACTTTATTTCCAGAAA GTTCTTTTTCAAAATTTTCAACTTCAAAAACAATTTTTGATCGCTTAAAG ATGGGTAGCTTTTTTCAAATGGTCCTAAAAACATAGGTTTGCAATTTTAG TGATATCTAGAGACCTCTTTAAATTGAGAATATGAAATTCTGACCCTTTT AGTTTTCTCCTATATTTTGCAAAAAAAATGACAGGATTTGCCATTTTTGC TGATTCATGATTCAGTGAAAATTTTTATGTATAATGTTAATGTTTTCTTA TAAAACTATTAAGCCAAGTTTGATAAGAACAGAATTCAAAGATTTTTTGC TGTTGCTCATTTTTAGAATTTTCGGTTTTCTCAATGCTGGTTCTAGGGCC CCCAAAATACTAGTTGACCTTTAAGATGCTATATCTTTTACTCATATTCT AAAGTCACAAATGCTTTAATTTTCTATATTCCATTTTCTAGTTTTTTTTT CAATATTCAAGGAGCTAGAGTAAGTTATGTGCAATTTTTATCCAATTTTG GTGCTGTAATACTTCTTTCAGACCAAAATATGTTATTTTGAATTTGTTTT AAATCTTCAGAAACCTGCAGAAACATACTCATTTTTAGATATAACCACCA TTCTTTCAAAACAAACTGAAATCGTCTGATTCTGACTAATCGAAGGGTTA TAACCCTCATTTTAATAACGATCTACATTTTGGGGGCCATAGGATTGAAA TAATCTGTTATTCTCCTAAGATTGTAAGATATTAAAAGTACCACCGAAAA AGTTTTTTTGCTACCTAAAGATTAAGTTACATCTTAACATTTTTCATAGC CATGGCTGAAATAAAGGACACAAGTACCGGGTGACCCACGAAAAAGTTCG GACGTTTCTCGGCGTCTTGAGGCCGAAAA

Coding sequence (CDS) from alignment at scaffold_361:731569..737597-

>TCONS_00062011 ID=TCONS_00062011|Name=TCONS_00062011|organism=Clytia hemisphaerica|type=CDS|length=2277bp|location=Sequence derived from alignment at scaffold_361:731569..737597- (Clytia hemisphaerica)
GTGTTGCTTCAGGAAGTGCTGCTGCAGCTGCTCAAAGTGCATTTTATGGA
GGTGCAACTGGTGGAATTTTTTCTATACTTCAAAGTGCTGGAGCTGTTGG
CATTGGAATTTTTGGGAATACTGCTATTGGTTTAGCAGGTGCTAGCGCTG
GTGCAGGTTTAGCAGCAGCTGCAGGAGCTGGTGCAAATGAAACAGCTTTA
GTTAGAAAACCTGCTGTGATTGGTATACTTTCTAGGTGGGCTAGAAATAA
CAATAATGTTAAAAATGAAGACAAAAAGAAAATTAAAACTTTTACAGATA
AGAAGTTGGGAATTAAAGAAGATCCAAATTATGTACCTTGGAGTATTATG
GCCAAGAATTTGTTTCAAACAGCAATAGGGTCTCTTGAAGCTTTGAAACC
AACAGTTTTGGTATATTTTAAAGATAGTTATATTAAACTCGAGTGAGGAA
ACGTATTGGAAAAATAGCAGGTATCTCATTTGGAGTAGGACTTGCATCTG
TTGTAGCTGCACCCCTTGTTCTCACAGCAGCAGGATTTACATCAGGAGAT
GGAAGTATTTGAAAACCCAGCTATTTTTTATTTATCAATTGATGAACCAA
TTATCCCAAACATTTTGGAAGATTTGAAAAAAGGTGGCTTCAATGAGAAT
GTGCAATGTATAGAGCTGAGCGAAGATGAATTAGAAAGAGCTCAAACAGA
AATATGCAATGACTTGACAACACCCTTTATTTTGTTTTGTGCAGAAGGGA
AAGTAAACTGTGTTGCTTCAGGAAGTGCTGCTGCAGCTGCTCAAAGTGCA
TTTTATGGAGGTGCAACTGGTGGAATTTTTTCTATACTTCAAAGTGCTGG
AGCTGTTGGCATTGGAATTTTTGGGAATACTGCTATTGGTTTAGCAGGTG
CTAGCGCTGGTGCAGGTTTAGCAGCAGCTGCAGGAGCTGGTGCAAATGAA
ACAGCTTTAGTTAGAAAACCTGCTGTGATTGGTATACTTTCTAGGTGGGC
TAGAAATAACAATAATGTTAAAAATGAAGACAAAAAGAAAATTAAAACTT
TTACAGATAAGAAGTTGGGAATTAAAGAAGATCCAAATTATGTACCTTGG
AGTATTATGGCCAAGAATTTGTTTCAAACAGCAATAGGGTCTCTTGAAGC
TTTGAAACCAACAGTTTTGGTATATTTTAAAGATAGTTATATTAAACTCG
AGTGAGGAAACGTATTGGAAAAATAGCAGGTATCTCATTTGGAGTAGGAC
TTGCATCTGTTGTAGCTGCACCCCTTGTTCTCACAGCAGCAGGATTTACA
TCAGGAGATGGAAGTATTTGAAAACCCAGCTATTTTTTATTTATCAATTG
ATGAACCAATTATCCCAAACATTTTGGAAGATTTGAAAAAAGGTGGCTTC
AATGAGAATGTGCAATGTATAGAGCTGAGCGAAGATGAATTAGAAAGAGC
TCAAACAGAAATATGCAATGACTTGACAACACCCTTTATTTTGTTTTGTG
CAGAAGGGAAAGTAAACTGTGTTGCTTCAGGAAGTGCTGCTGCAGCTGCT
CAAAGTGCATTTTATGGAGGTGCAACTGGTGGAATTTTTTCTATACTTCA
AAGTGCTGGAGCTGTTGGCATTGGAATTTTTGGGAATACTGCTATTGGTT
TAGCAGGTGCTAGCGCTGGTGCAGGTTTAGCAGCAGCTGCAGGAGCTGGT
GCAAATGAAACAGCTTTAGTTAGAAAACCTGCTGTGATTGGTATACTTTC
TAGGTGGGCTAGAAATAACAATAATGTTAAAAATGAAGACAAAAAGAAAA
TTAAAACTTTTACAGATAAGAAGTTGGGAATTAAAGAAGATCCAAATTAT
GTACCTTGGAGTATTATGGCCAAGAATTTGTTTCAAACAGCAATAGGGTC
TCTTGAAGCTTTGAAACCAACAGTTTTGGTATATTTTAAAGATAGTTATA
TTAAACTCGAGTGAGGAAACGTATTGGAAAAATAGCAGGTATCTCATTTG
GAGTAGGACTTGCATCTGTTGTAGCTGCACCCCTTGTTCTCACAGCAGCA
GGATTTACATCAGGAGATGGAAGTATTTGAAAACCCAGCTATTTTTTATT
TATCAATTGATGAACCAATTATCCCAAACATTTTGGAAGATTTGAAAAAA
GGTGGCTTCAATGAGAATGTGCAATGTATAGAGCTGAGCGAAGATGAATT
AGAAAGAGCTCAAACAGAAATATGCAATGACTTGACAACACCCTTTATTT
TGTTTTGTGCAGAAGGGAAAGTAAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038870XLOC_038870Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062011-proteinTCONS_00062011-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062011-exon-scaffold_361-1575043694:735538..737597TCONS_00062011-exon-scaffold_361-1575043694:735538..737597Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1575043694:735190..735291TCONS_00062011-exon-scaffold_361-1575043694:735190..735291Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1575043694:732592..734984TCONS_00062011-exon-scaffold_361-1575043694:732592..734984Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1575043694:731569..731648TCONS_00062011-exon-scaffold_361-1575043694:731569..731648Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1510915933:735538..737597TCONS_00062011-exon-scaffold_361-1510915933:735538..737597Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1510915933:735190..735291TCONS_00062011-exon-scaffold_361-1510915933:735190..735291Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1510915933:732592..734984TCONS_00062011-exon-scaffold_361-1510915933:732592..734984Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1510915933:731569..731648TCONS_00062011-exon-scaffold_361-1510915933:731569..731648Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1491911889:735538..737597TCONS_00062011-exon-scaffold_361-1491911889:735538..737597Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1491911889:735190..735291TCONS_00062011-exon-scaffold_361-1491911889:735190..735291Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1491911889:732592..734984TCONS_00062011-exon-scaffold_361-1491911889:732592..734984Clytia hemisphaericaexon
TCONS_00062011-exon-scaffold_361-1491911889:731569..731648TCONS_00062011-exon-scaffold_361-1491911889:731569..731648Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:731569..737597 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.05638 3.32935 1.52997 1.67063 13.8863 9.43961 5.78944 6.46106 6.30053 7.75779 5.34061 4.01589 4.17682 3.37213 4.02488 3.59962 4.92223 4.98638 5.18072 6.19903 5.21188 4.75915 8.47744 9.29159 5.33914 7.01936 14.2945 12.2516 12.7028 12.852
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009311IFI6/IFI27
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062011 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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